Metagenome Family F094450

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094450
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	65 residues
Representative Sequence	MEDASRSTLTNASEQVVHALNNTATQFASHPSAVAASGLPVAAVFGFIPGLMMGFKKG
Number of Associated Samples	57
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	17.14 %
% of genes near scaffold ends (potentially truncated)	59.43 %
% of genes from short scaffolds (< 2000 bps)	83.96 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.660 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (36.792 % of family members)
Environment Ontology (ENVO)	Unclassified (48.113 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (79.245 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.79% β-sheet: 0.00% Coil/Unstructured: 37.21%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF04930	FUN14	11.32
PF02775	TPP_enzyme_C	2.83
PF00582	Usp	1.89
PF02518	HATPase_c	0.94
PF13649	Methyltransf_25	0.94
PF00903	Glyoxalase	0.94
PF04679	DNA_ligase_A_C	0.94
PF02195	ParBc	0.94
PF04208	MtrA	0.94
PF05496	RuvB_N	0.94
PF02541	Ppx-GppA	0.94
PF02852	Pyr_redox_dim	0.94
PF04014	MazE_antitoxin	0.94
PF01555	N6_N4_Mtase	0.94
PF07282	OrfB_Zn_ribbon	0.94
PF01139	RtcB	0.94
PF01548	DEDD_Tnp_IS110	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG2383	Uncharacterized membrane protein, Fun14 family	Function unknown [S]	11.32
COG0248	Exopolyphosphatase/pppGpp-phosphohydrolase	Signal transduction mechanisms [T]	1.89
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.94
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.94
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	0.94
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.94
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.94
COG2255	Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB	Replication, recombination and repair [L]	0.94
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.94
COG4063	Tetrahydromethanopterin S-methyltransferase, subunit A	Coenzyme transport and metabolism [H]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
All Organisms	root	All Organisms	44.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
cellular organisms	root	All Organisms → cellular organisms	43.40 %
Viruses	superkingdom	All Organisms → Viruses	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	40.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	10.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	10.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	8.49 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.83 %
Thaumarchaeota incertae sedis	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis	0.94 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	8.49 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.83 %
Candidatus Nitrosotenuis	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	0.94 %
unclassified Nitrosopumilales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	8.49 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.83 %
Candidatus Nitrosotenuis uzonensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis uzonensis	0.94 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	5.66 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.83 %
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1.89 %
Candidatus Nitrosotenuis uzonensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis uzonensis	0.94 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
unclassified Nitrososphaera	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera	5.66 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.83 %
unclassified Candidatus Nitrosocosmicus	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → unclassified Candidatus Nitrosocosmicus	0.94 %
Candidatus Nitrosotenuis uzonensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis uzonensis	0.94 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
Nitrososphaera sp. AFS	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp. AFS	3.77 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.83 %
Nitrososphaera sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp.	1.89 %
Candidatus Nitrosocosmicus sp. SS	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → unclassified Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus sp. SS	0.94 %
Candidatus Nitrosotenuis uzonensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis uzonensis	0.94 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1033550	Not Available	802	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1034871	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp.	785	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10000390	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp. AFS	9717	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10139406	Not Available	587	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1033947	Not Available	935	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1067205	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp.	633	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10071561	Not Available	749	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10092693	All Organisms → cellular organisms → Archaea	640	Open in IMG/M
3300005172\|Ga0066683_10059741	All Organisms → cellular organisms → Archaea	2264	Open in IMG/M
3300005332\|Ga0066388_101312218	Not Available	1249	Open in IMG/M
3300005332\|Ga0066388_106210642	Not Available	603	Open in IMG/M
3300005434\|Ga0070709_10026596	All Organisms → cellular organisms → Archaea	3431	Open in IMG/M
3300005434\|Ga0070709_10627803	All Organisms → cellular organisms → Archaea	830	Open in IMG/M
3300005435\|Ga0070714_100031918	All Organisms → cellular organisms → Archaea	4396	Open in IMG/M
3300005435\|Ga0070714_100539674	All Organisms → cellular organisms → Archaea	1115	Open in IMG/M
3300005439\|Ga0070711_100393365	All Organisms → cellular organisms → Archaea	1123	Open in IMG/M
3300005467\|Ga0070706_100880130	All Organisms → cellular organisms → Archaea	828	Open in IMG/M
3300005552\|Ga0066701_10842722	Not Available	545	Open in IMG/M
3300005558\|Ga0066698_10132918	Not Available	1669	Open in IMG/M
3300005764\|Ga0066903_104512305	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300006163\|Ga0070715_10447057	All Organisms → cellular organisms → Archaea	729	Open in IMG/M
3300006173\|Ga0070716_100248083	All Organisms → cellular organisms → Archaea	1211	Open in IMG/M
3300006173\|Ga0070716_101421488	Not Available	565	Open in IMG/M
3300006174\|Ga0075014_100488029	Not Available	687	Open in IMG/M
3300006175\|Ga0070712_101476065	All Organisms → cellular organisms → Archaea	594	Open in IMG/M
3300009137\|Ga0066709_100947778	All Organisms → cellular organisms → Archaea	1257	Open in IMG/M
3300009839\|Ga0116223_10893027	Not Available	507	Open in IMG/M
3300010046\|Ga0126384_10716761	Not Available	888	Open in IMG/M
3300010048\|Ga0126373_10115395	Not Available	2504	Open in IMG/M
3300010048\|Ga0126373_10327490	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300010048\|Ga0126373_10505060	Not Available	1252	Open in IMG/M
3300010048\|Ga0126373_10634589	Not Available	1123	Open in IMG/M
3300010048\|Ga0126373_10725626	Not Available	1053	Open in IMG/M
3300010048\|Ga0126373_11410254	Not Available	762	Open in IMG/M
3300010048\|Ga0126373_11587640	Not Available	719	Open in IMG/M
3300010048\|Ga0126373_12681265	Not Available	556	Open in IMG/M
3300010358\|Ga0126370_10733266	All Organisms → cellular organisms → Archaea	872	Open in IMG/M
3300010359\|Ga0126376_10269892	Not Available	1460	Open in IMG/M
3300010359\|Ga0126376_11461696	Not Available	711	Open in IMG/M
3300010360\|Ga0126372_13282008	Not Available	503	Open in IMG/M
3300010361\|Ga0126378_10941434	Not Available	969	Open in IMG/M
3300010362\|Ga0126377_10252242	All Organisms → cellular organisms → Archaea	1718	Open in IMG/M
3300010366\|Ga0126379_10639803	All Organisms → Viruses → Predicted Viral	1153	Open in IMG/M
3300010376\|Ga0126381_100826930	All Organisms → cellular organisms → Archaea	1331	Open in IMG/M
3300010376\|Ga0126381_101385737	Not Available	1016	Open in IMG/M
3300010376\|Ga0126381_102353349	Not Available	765	Open in IMG/M
3300010376\|Ga0126381_102533933	Not Available	735	Open in IMG/M
3300010376\|Ga0126381_102730326	Not Available	706	Open in IMG/M
3300010376\|Ga0126381_103301980	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → unclassified Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus sp. SS	636	Open in IMG/M
3300010376\|Ga0126381_103487058	Not Available	618	Open in IMG/M
3300010398\|Ga0126383_11144363	Not Available	868	Open in IMG/M
3300012004\|Ga0120134_1061199	All Organisms → cellular organisms → Archaea	667	Open in IMG/M
3300012088\|Ga0153944_1096347	Not Available	567	Open in IMG/M
3300012089\|Ga0153924_1035129	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	984	Open in IMG/M
3300012198\|Ga0137364_11265243	Not Available	550	Open in IMG/M
3300012201\|Ga0137365_10189357	All Organisms → cellular organisms → Archaea	1540	Open in IMG/M
3300012207\|Ga0137381_10967361	All Organisms → cellular organisms → Archaea	735	Open in IMG/M
3300012209\|Ga0137379_10635138	All Organisms → cellular organisms → Archaea	974	Open in IMG/M
3300012351\|Ga0137386_11034587	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	583	Open in IMG/M
3300012971\|Ga0126369_12827608	Not Available	568	Open in IMG/M
3300012971\|Ga0126369_13169460	Not Available	539	Open in IMG/M
3300013294\|Ga0120150_1020021	Not Available	1368	Open in IMG/M
3300013768\|Ga0120155_1113350	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp. AFS	751	Open in IMG/M
3300013772\|Ga0120158_10141059	All Organisms → cellular organisms → Archaea	1352	Open in IMG/M
3300014827\|Ga0120171_1102989	Not Available	717	Open in IMG/M
3300017959\|Ga0187779_10025322	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis uzonensis	3395	Open in IMG/M
3300017959\|Ga0187779_10029851	Not Available	3134	Open in IMG/M
3300017966\|Ga0187776_10041447	All Organisms → cellular organisms → Archaea	2596	Open in IMG/M
3300017966\|Ga0187776_10049654	All Organisms → cellular organisms → Archaea	2384	Open in IMG/M
3300017973\|Ga0187780_10049841	Not Available	2907	Open in IMG/M
3300017973\|Ga0187780_10645341	Not Available	762	Open in IMG/M
3300017973\|Ga0187780_11176931	Not Available	561	Open in IMG/M
3300017974\|Ga0187777_10033590	All Organisms → cellular organisms → Archaea	3294	Open in IMG/M
3300017974\|Ga0187777_10035925	All Organisms → cellular organisms → Archaea	3181	Open in IMG/M
3300017974\|Ga0187777_10059846	All Organisms → cellular organisms → Archaea	2457	Open in IMG/M
3300017974\|Ga0187777_11348922	Not Available	525	Open in IMG/M
3300017999\|Ga0187767_10098213	All Organisms → cellular organisms → Archaea	810	Open in IMG/M
3300017999\|Ga0187767_10150014	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp. AFS	697	Open in IMG/M
3300017999\|Ga0187767_10221651	Not Available	608	Open in IMG/M
3300018058\|Ga0187766_10839282	Not Available	644	Open in IMG/M
3300018064\|Ga0187773_10541804	Not Available	701	Open in IMG/M
3300018085\|Ga0187772_10016331	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp. AFS	4174	Open in IMG/M
3300018085\|Ga0187772_10474350	Not Available	879	Open in IMG/M
3300018090\|Ga0187770_11543832	Not Available	541	Open in IMG/M
3300018433\|Ga0066667_10351289	All Organisms → cellular organisms → Archaea	1172	Open in IMG/M
3300018433\|Ga0066667_12282647	Not Available	506	Open in IMG/M
3300018468\|Ga0066662_11319666	All Organisms → cellular organisms → Archaea	741	Open in IMG/M
3300018468\|Ga0066662_12737033	Not Available	522	Open in IMG/M
3300021560\|Ga0126371_10146108	Not Available	2421	Open in IMG/M
3300021560\|Ga0126371_10476577	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300021560\|Ga0126371_10610914	All Organisms → cellular organisms → Archaea	1239	Open in IMG/M
3300021560\|Ga0126371_10817208	Not Available	1078	Open in IMG/M
3300021560\|Ga0126371_10967872	Not Available	994	Open in IMG/M
3300021560\|Ga0126371_11324598	Not Available	853	Open in IMG/M
3300021560\|Ga0126371_11452484	Not Available	815	Open in IMG/M
3300021560\|Ga0126371_12170523	Not Available	670	Open in IMG/M
3300021560\|Ga0126371_12175022	Not Available	669	Open in IMG/M
3300021560\|Ga0126371_13150457	Not Available	558	Open in IMG/M
3300021560\|Ga0126371_13224095	Not Available	552	Open in IMG/M
3300021560\|Ga0126371_13333865	Not Available	543	Open in IMG/M
3300021560\|Ga0126371_13587372	All Organisms → cellular organisms → Archaea	524	Open in IMG/M
3300025898\|Ga0207692_10467266	All Organisms → cellular organisms → Archaea	796	Open in IMG/M
3300025898\|Ga0207692_10588932	Not Available	714	Open in IMG/M
3300025916\|Ga0207663_10683658	All Organisms → cellular organisms → Archaea	812	Open in IMG/M
3300025939\|Ga0207665_10053209	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	2729	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.11%
Host-Associated	Host-Associated	1.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.17%
Fungi	Host-Associated → Fungi	1.89%
Aquatic	Environmental → Aquatic	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.17%
Mycelium	Host-Associated → Fungi → Mycelium	1.89%
Sediment	Environmental → Aquatic → Sediment	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.92%
Loam	Environmental → Terrestrial → Soil → Loam	16.04%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.45%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.55%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.83%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	36.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	17.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	8.49%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.89%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012088	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ028 MetaG	Host-Associated	Open in IMG/M
3300012089	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ008 MetaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014827	Permafrost microbial communities from Nunavut, Canada - A3_80cm_18M	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10335501	3300000580	Forest Soil	VKWIAMENATRSTLTNVAGQAVHALNNTATQFAAHPSAIAASGLPVAAISGFVPGLMVGFKKG*
AF_2010_repII_A01DRAFT_10348713	3300000580	Forest Soil	MENASRSTLTNASEQVVHALNNTATQFVAHPSAVSASGLPIVATFGFVPGLMMGFRKYF*
AF_2010_repII_A1DRAFT_1000039011	3300000597	Forest Soil	VGCDGDATRSTLTNVAGQAIHALNNTATQFAAHSSAIVASGLPVAAMFGFVPGLMVGFKKG*
AF_2010_repII_A1DRAFT_101332062	3300000597	Forest Soil	TLTSVAGRAVHALNNTATQFAAHPSAITTSGLPVAAMFGFVPGLMMGFRKG*
AF_2010_repII_A1DRAFT_101394061	3300000597	Forest Soil	RGWVDVKWVAMEDASRSTLTNASEQIVIALNNTTTQFTSHPSAVVTSGLPIAAMFGFVPGLMMGFKKG*
AF_2010_repII_A100DRAFT_10339471	3300000655	Forest Soil	LNYILATFAYLSYRGWVDVKWATMEDPSRSTLANASEQVVHALNNTATQFASHPSAVAASGLPIAATFGFV
AF_2010_repII_A100DRAFT_10672052	3300000655	Forest Soil	VDIKWVAMENASRSTLTNASEQVVHALNNTATQFVAHPSAVSASGLPIVATFGFVPGLMMGFRKYF*
AF_2010_repII_A001DRAFT_100715612	3300000793	Forest Soil	VAALAYLSYKGFIDVKWIAMENATRSALMSVSGQAVHTLNNTATQFASHPSAIAASGLPVAAMFGFVPGLMVGFKKG*
AF_2010_repII_A001DRAFT_100926932	3300000793	Forest Soil	YKGFIDVKWIAMENVTRSTLTSVTGQAVHAFNNTATQFAAHPSTIAPSGLPVAAMFGFVPGLMFGFKKG*
Ga0066683_100597411	3300005172	Soil	YLSYKGFIDVKWVALENVTRNTLTGVAGQAVHTLDNTATQFAIHPSVTTASGLPIAAMFGFVPGLVLGFKKG*
Ga0066388_1013122183	3300005332	Tropical Forest Soil	DVKWVAMEDASRSTLTNASEQVVHALNNTATQFASHPSVVAVSGLPVAAVFGFVPGLMMGLKKG*
Ga0066388_1062106421	3300005332	Tropical Forest Soil	YLSYKGWVDVKWVVMENASRSTLTNASEEVFHVLNNTATQFASHPSAVYASDLPIAATFGFVPGLMMGLRKG*
Ga0070709_100265966	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLAWIIVCSRLAYLSHKGFVEVKWIAMENITRSALTNASGQVVHAFNNTATHFAAHPSVVPTSGLPIATAVGFVPGLLIGFKKG*
Ga0070709_106278032	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MENATRNALSNASGQVVHALNIHALNNTATQFTAHPSAVSASGLPIAAAVGFVPGLLTGFKG*
Ga0070714_10003191811	3300005435	Agricultural Soil	VKWVAMENATRSALTNASGQIVHALNNTATQVAAHPSALSASGLPIAAVVGFVPGLLTGFEKG*
Ga0070714_1005396742	3300005435	Agricultural Soil	LFVAALAYLSYKGLTDVKWVAMENATRSALTNVSGQVVHALNNTATQFAAHPSAVATSGLPIEAAVGFVPGLLMGFWKG*
Ga0070711_1003933651	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLAWIIVCSRLAYLSHKGFVEVKWIAMENITRSALTNASGQVVHAFNNTATHFAAHPSVVPTSGLPIATVVGFVPGLLIGFKKG*
Ga0070706_1008801301	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	KWVAMENATRSALTNATGQVVHALNNTSTQFAAHPSTVSASGLPIAAAVGFVPGLLMGFKKG*
Ga0066701_108427221	3300005552	Soil	TRSALTNATGQVVHALNNTATQFAAHPSGVSVSGLPIAAAVGFVPAVLMGFKKG*
Ga0066698_101329182	3300005558	Soil	VAALAYISYKGLIDVKWVEIENATRSSLISVAGQVIHALNNTATHFSAHPSVAAASGLPIATMFGFVPGLMMGLKRG*
Ga0066903_1045123051	3300005764	Tropical Forest Soil	MEDASRSTLTNASEQVIHALNNTASQFASHTSAVAASGLPVATMFGFVPGLMMG
Ga0070715_104470573	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	ATRSALTNATGQVVHALNNTATQFAAHSSAILASGLPIAAAIGFVPGLLTGFKKG*
Ga0070716_1002480831	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MENATRSALTNATGQVVHALKNTATQFAAYPSAVSASGLPIAAAVLFVPGLLMGFKKG*
Ga0070716_1014214881	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MENATRNALSNASGQVVHALNIHALNNTATQFTPHPSAVSASGLPIAAAVGFVPGLLTGFEK
Ga0075014_1004880291	3300006174	Watersheds	LTNASDQVIHALNNTATQFAAHPSAVAASGLPIAATLGFVPGLMMGIRKG*
Ga0070712_1014760651	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LEHATRSALTNATGQVVHALNNTVTQFAAHSSAISTSGLPIAAAIGFLPGLLMGFKKG*
Ga0066709_1009477781	3300009137	Grasslands Soil	AMENVTRSTLTSMTGQVVHALNDTASQFAAHPSVLAASGLPLAAVFGFVPGIMVGFKRG*
Ga0116223_108930272	3300009839	Peatlands Soil	MEDASRSTLTNASEQVIHALNKTATQFAGHPSTLTASGLPIAATFGFVPGLMMGFKKG*
Ga0126384_107167611	3300010046	Tropical Forest Soil	MALAYLSYREWVNIKWVAMENASRSTLTNASEQVVHALNNTATQFVAHPSAVSASGLPIVATFGFVPGLMMGFRKE*
Ga0126373_101153951	3300010048	Tropical Forest Soil	MEDASTNTLTNASEQVVNALNTATQFTSHASSLSASGLSIAAMFGFVPGLMMGFKKG*
Ga0126373_103274902	3300010048	Tropical Forest Soil	MEDASRSTLTNASEQVIHALNNTASQFASHTSAVAASGLPVATMFGFVPGLMMGFRKG*
Ga0126373_105050602	3300010048	Tropical Forest Soil	WVDVKLAAMEDASRSTLTDAFEQVVHAFNNTATQFASHQSAVAASGLPVTAMVGFVPGLMIGFRKG*
Ga0126373_106345893	3300010048	Tropical Forest Soil	TLTNASEQVVHALNNTATQFASHPSTFGFVPGLMMGFKKNRIEYEKMD*
Ga0126373_107256261	3300010048	Tropical Forest Soil	DVKWAAMEDASRSTLTNASEQVIHALNNTATRFAAHPSTLTTSGLPLAATFGFVPGLMMGFKKG*
Ga0126373_114102541	3300010048	Tropical Forest Soil	AGLAYLSYRGWVDVRWAAMEDASRSTLTNALEQIAHALNTTATQFTSHPSPVTASGLPIAAMFVLLFFIVI*
Ga0126373_115876401	3300010048	Tropical Forest Soil	VAMEDVSRSTLTNASEQVVHALNDTTTQFAAHSSAVSGLPIAATFRFVPGLMMGFGKG*
Ga0126373_126812652	3300010048	Tropical Forest Soil	DASRSTLANASEHVVHALNNTATQFASHPSAVAASGLPIAATFGFVPGLLMGIRKG*
Ga0126370_107332662	3300010358	Tropical Forest Soil	MIDVLFDMQPKYLLIDRVKWAAMEDASRSTLANTSEQVVHAFNNTATQFASHPSAVAASGLPIAATFEFVLGLMMGFKKG*
Ga0126376_102698921	3300010359	Tropical Forest Soil	IVVVCLAYLSYRGWVDVKWAAMEDASRSTLTNASDLVVHALSNTATQFVSHTSAVSVSALPIAATFGLVPGLMMGLKNG*
Ga0126376_114616961	3300010359	Tropical Forest Soil	VVIGLFVAALAYLSYRGGVDVKCAAMEDASRSTLTNASEQVIHALNNTATQFAAHPSTLTASGLPIAATFGFVPGLMMGFKKG*
Ga0126372_132820082	3300010360	Tropical Forest Soil	MEDASRSTLTNASEQVVHALNNTATQFASHPSAVAASGLPVAAVFGFIPGLMMGFKKG*
Ga0126378_109414342	3300010361	Tropical Forest Soil	AVMEDASRSTLTNASEQVVHALNDTATQFASHPSTVAVSGLPIAATFGFVPGLMMGFKKG
Ga0126377_102522423	3300010362	Tropical Forest Soil	LVDVNWAAMEDASRSTLTNASEQVVHALNNTATQFVSHPSNVAASSLPVAAMVGFVPGLLMGFRKG*
Ga0126379_106398033	3300010366	Tropical Forest Soil	LSYRGWVDVKWVAMEDASRSTLTNATEQIVNALNNTATQFASHPSAVAASGLPIAAVFGFVPGLMMGIRKG*
Ga0126381_1008269302	3300010376	Tropical Forest Soil	MEDASKSTLTNTLEQVVHAFNNTTTQFASHPSAVATSGVPVAPMVGFVPGLMMGLKKG*
Ga0126381_1013857371	3300010376	Tropical Forest Soil	TNASEQVVHALNNTATQSASHPSAAAVSGLPVAGVFGFVPGLMMGLKKG*
Ga0126381_1023533492	3300010376	Tropical Forest Soil	VDIKWVAMENASRSTLTNASEQVVHALNNTATQFVAHPSAVSASGLPIVATFGFVPGLMMGFRKE*
Ga0126381_1025339331	3300010376	Tropical Forest Soil	LAYLSYRGWVDVKWAAVEDPSRSTLTNASEQVVHAFNNTATQFASHPSTVAASGLPLVATFGFVPGLMMGFKKG*
Ga0126381_1027303261	3300010376	Tropical Forest Soil	LVFGYLSYRGWVDVKWAAMEDASRSTLTNASEQIVNAVNNTVTQFTSHASSLSASGLGIAAMFRFVPGLMMGFKKG*
Ga0126381_1033019801	3300010376	Tropical Forest Soil	EDASKSTLTNTLEQVVHAFNNTALTTQFASHPSVAASGLPVAAMVGFVPGLMMGLKKG*
Ga0126381_1034870582	3300010376	Tropical Forest Soil	MEDASRITLANASEQVVHALNNTATQFASHPSAVAASGLPIAATFGFVPGLLMGIRKG*
Ga0126383_111443632	3300010398	Tropical Forest Soil	MEDASRSTLTNASEQIVNALNNTATQFASHPSAVYLSGMPIAATFGFVPGLLMGIRKG*
Ga0120134_10611993	3300012004	Permafrost	GLIDVKWVAMENATRSALMNASGQVVHALNNTATQFAAHPSAVTASGLPIAAAVGFVPGMLTGFKKG*
Ga0153944_10963471	3300012088	Attine Ant Fungus Gardens	STLANASEQVVNALNYTASQLASHPSSVTASGLPVAAMVGFVPGLLMGIKKG*
Ga0153924_10351291	3300012089	Attine Ant Fungus Gardens	MENASRSTLTNASEQVVQALNNTATQFASHPSTLAASGLPVAAVFGFVPGLVMGLKKG*
Ga0137364_112652432	3300012198	Vadose Zone Soil	ICHKESHENSCSSFGLFVAALAYLSYKRLIDVKWIAMENATRSALMNASGQVVHALNNTATQFAAHSSVISASGLPIAAAVGFVPGLLTGIKKG*
Ga0137365_101893573	3300012201	Vadose Zone Soil	VAALAYLSYKRLIDVKWIAMENATRSALMNASGQVVHALNNTATQFAAHSSVISASGLPIAAAVGFVPGLLTGIKG*
Ga0137381_109673612	3300012207	Vadose Zone Soil	LIDVKWVAMENATRRALTNATGQVVHALNNTSTQFAAHPSTVSASGLPIAAAVGFVPGLLMGFKKG*
Ga0137379_106351381	3300012209	Vadose Zone Soil	YKGLIDVKWVAMENATRSALTNATGQVVHALNNTSTQFAAHPSTVSASGLPIAAAVGFVPGLLMGFKKG*
Ga0137386_110345871	3300012351	Vadose Zone Soil	VGGKATTVSGQVVQALNNTATQFAAHPSAVSASGLPIAAAVGFVPGLLIGFKKG*
Ga0126369_128276081	3300012971	Tropical Forest Soil	RSTLTNASEQVVHALNNTATQFASHPSAVAASVAAVFGFVPGLMIGFKKG*
Ga0126369_131694601	3300012971	Tropical Forest Soil	GIAYLSYRGWVDIKWVVMEDASRRTLTNASEQIAHALNNTATQFAAYSSAAASRLPIAAMFGFVPGVMIGFKKG*
Ga0120150_10200211	3300013294	Permafrost	VAGLAYLSYKGLIDVKWVAMENVTRSALTNASGQVVHALNNTATQFVGHPSAVAASGLPIAAMFGFVPGLLMGFKKG*
Ga0120155_11133502	3300013768	Permafrost	VAGLAYLSYKRLIDVKWVAMENVTRSALTNASGQVVHALNNTVTQFAAHTSSVSTSGLPIAAMFGFVPGLLMGFKKG*
Ga0120158_101410591	3300013772	Permafrost	VIGLFVTALAFLSYKGLMDVKWVAMENVTRSALMNASGQVVHALNNTVTQFAAHTSSVSTSGLPIAAATGFVPRLLTGLKKG*
Ga0120171_11029892	3300014827	Permafrost	VAGLAYLSYKGLIDVKWVAMENVTRSALTNASGQVVHTLNNTATQFVGHPSAVAASGLPIAAMFGFVPGLLMGFKKG*
Ga0187779_100253224	3300017959	Tropical Peatland	MEDASRSTLMNASQQVVHLLNNTATEIASHPSTVTASGLSIAATFRVVPGLIMGIRKG
Ga0187779_100298514	3300017959	Tropical Peatland	VKWAAMEYASRSTLTNASGQVIHALNNTATQFVSHPSAAAASGYPIAATFGFVPGLMMGFKKG
Ga0187776_100414473	3300017966	Tropical Peatland	MEDASRSTLTNASEQVVNALNNTATQFALHPSTLAASGLPIAAVFGFVPGLMMGFRKG
Ga0187776_100496541	3300017966	Tropical Peatland	MKTAAVVIGSFVAAIAHLSYGVWVDVKWVATEAASRSTLTNVSEQVVNSLNNAATQFASHPAIVAASGAAMFGFVPRLMIGFKRG
Ga0187780_100498413	3300017973	Tropical Peatland	VKWAAMEYASRSTLTNASEQVIHALNNTATQFVSHPSAAAASGYPIAATFGFVPGLMMGFKKG
Ga0187780_106453412	3300017973	Tropical Peatland	MEDASRSTLTNASEQVIHALNNTATQFTSHASSLSASGLPIAAMFGFVPGLMMGFKKG
Ga0187780_111769312	3300017973	Tropical Peatland	EDASRSTLTNVSEQVVNSLNNTATQFASHPSAVPASGLPVAAMFGFVPGLMVGIKKG
Ga0187777_100335904	3300017974	Tropical Peatland	MEYASRSTLTNASEQVIHALNNTATQFVSHPSAAAASGYPIAATFGFVPGLMMGFKKG
Ga0187777_100359251	3300017974	Tropical Peatland	MEDASRSTLTNASEQIAHALNTTATQFASHPSPVAASALPIAAMFGFVPGLMMGFKKG
Ga0187777_100598461	3300017974	Tropical Peatland	GWVDVKWVAMEDASRSTLMNASQQVVHLLNNTATEIASHPSTVTASGLSIAATFRVVPGLIMGIRKG
Ga0187777_113489221	3300017974	Tropical Peatland	EDASGSTLTNASEQVVHALSNTATQFASHPSAVAASGLPVAAVFGFVPGLMMGFKKG
Ga0187767_100982131	3300017999	Tropical Peatland	SALTNISEQVVDALNNTAIQFSSHPSAVTASGLPMAAAFGFVPGLMMGLKKG
Ga0187767_101500143	3300017999	Tropical Peatland	MEDASRNTLTNASEQVVNALNNTTTQFTSHASSLSASGLPIAAMFGFVPGLMMGFKKG
Ga0187767_102216511	3300017999	Tropical Peatland	STLTNASEQVIHALNNTATQFVSHPSAAAASGYPIAATFGFVPGLMMGFKKG
Ga0187766_108392821	3300018058	Tropical Peatland	MEDALRSTLTNASDQVVHALNATATQFVSHPSAVTASALPIGATFGFVHD
Ga0187773_105418042	3300018064	Tropical Peatland	MKTAAVVIGSYVAAIAHLSYGVWVDVKWVATEAASRSTLTNVSEQVVNSLNNTATQFASHPAIVAASGAAMFGFVPRLMIGFKRG
Ga0187772_100163313	3300018085	Tropical Peatland	VKWAAMEDALRSTLTNASDQVVHALNATATQFVSHPSAVTASALPIGATFGFVHD
Ga0187772_104743502	3300018085	Tropical Peatland	GLFVAGLAYLSYRGWVDVKWGTMEDASRSMLTNASEQVVHALNNTATQFASHPSGVAASGLPVAAMFGFVPGLMMGLKKG
Ga0187770_115438321	3300018090	Tropical Peatland	WIAIEDASRSTLTNVSEHVIHALNNTTTQFASHPSTLAASGLPIAAMFGFVPGLMMGFKK
Ga0066667_103512893	3300018433	Grasslands Soil	VAALAYLSYKRLIDVKWIAMENATRSALMNASGQVVHALNNTATQFAAHSSVISASGLPIAAAVGFVPGLLTGIKKG
Ga0066667_122826471	3300018433	Grasslands Soil	SYKGLIDVKWVEIENATRSSLISVAGQVIHALNNTATHFSAHPSVAAASGLPIATMFGFVPGLMMGLKRG
Ga0066662_113196663	3300018468	Grasslands Soil	VENATRSALTNASGQVVHALNNTATQFAAHSSAVTASGLPIAAAVGFVPGQLTGFKKG
Ga0066662_127370331	3300018468	Grasslands Soil	LSYRGWVDVKWGTMVDASRSTLTSASEQVVHALNNTATQFASHPSAVATSGLPVAAVFGFVPGLMMGFKKG
Ga0126371_101461084	3300021560	Tropical Forest Soil	LTYLSYRGWVDVKWVAMEDASRSTLTNASEQVVHALNNTATQFASHPSAVAASSLPVAAMVGFVPGLMMGLKKG
Ga0126371_104765773	3300021560	Tropical Forest Soil	MEDASRSTLTNASEQVIHALNNTASQFASHTSAVAASGLPVATMFGFVPGLMMGFRKG
Ga0126371_106109143	3300021560	Tropical Forest Soil	MEDASRSTLTNASEQIVIALNNTTTQFTSHPSAVVTSGLPIAAMFGFVPGLMMGFKKG
Ga0126371_108172084	3300021560	Tropical Forest Soil	TLTNASEQIVHALNNTATQFTSHPSTVAAGLPVAAMVGFVPGIMMGIRKG
Ga0126371_109678721	3300021560	Tropical Forest Soil	ALAYLSYRGWVDVKWVAMENASRSMLTNASEEVVHALNNTATQFAAHPSVVSASGLPLAATFAFVPGLMMGFRKG
Ga0126371_113245981	3300021560	Tropical Forest Soil	MDEASRITLTNASEQVVNTLNNTATSHGSSLSASGLPIAVMFGFVPGLMMGFKKG
Ga0126371_114524842	3300021560	Tropical Forest Soil	KWVAMEDASRSTLTNASEQVVNALNNTTTQFTSHASSLSASGLSIAAMFGFVPGLMMGFKKG
Ga0126371_121705231	3300021560	Tropical Forest Soil	RSTLTNASEQVVHALNNTATQFASHPSAVAASGLPVAAVFGFIPGLMMGFKKG
Ga0126371_121750222	3300021560	Tropical Forest Soil	YRGWVDVKWVAMEDASRSTLTNASEQVVHALNNTATQFASHPSVVAVSGLPVAAVFGFVPGLMMGLKKG
Ga0126371_131504571	3300021560	Tropical Forest Soil	YRGWVDVKWGTMEDASKTTLTSMSEQVVHVLNNTATQFADHPSAVAASGLPVAAMFGFVPGLMMGLKKG
Ga0126371_132240952	3300021560	Tropical Forest Soil	LAYLSYRGWVDVRWAAMEDASKNTLTNALERVVHAFNNTTTQFASHPSAVATSGVPVAAMVGFVPGLMIGLKKG
Ga0126371_133338652	3300021560	Tropical Forest Soil	MALAYLSYRGWVNIKWVAMENASRSTLTNASEQVVHALNNTATQFVAHPSAVSASGLPIVATFGFVPGLMMGFRKYF
Ga0126371_135873721	3300021560	Tropical Forest Soil	TLTNASEQIIHAFNNTATQFTSHTSSLLASGLQIAARFGFLPRLMMGFKKG
Ga0207692_104672661	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	ATRSVLTNVTGQVVHALNNTATQFAAHPSAVTASGLPIAAAVGFIPGLLMGFKKG
Ga0207692_105889321	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MENATRSALTNATGQVVHALNNTATQFAAHSSAILASGLPIAAAIGFVPGLLTGFKKG
Ga0207663_106836582	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	GLIDVKWVALEHATRSALTNATGQVVHALNNTVTQFAAHSSAISTSGLPIAAAIGFLPGLLMGFKKG
Ga0207665_100532098	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	IDVKWVAMENATRSALTNASGQIVHALNNTATQVAAHPSALSASGLPIAAAVGFVPGLLTGFKG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094450

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences