Metagenome / Metatranscriptome Family F094429

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094429
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	121 residues
Representative Sequence	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRADEGR
Number of Associated Samples	82
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.77 %
% of genes near scaffold ends (potentially truncated)	36.79 %
% of genes from short scaffolds (< 2000 bps)	86.79 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.132 % of family members)
Environment Ontology (ENVO)	Unclassified (32.075 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.264 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 2.01% β-sheet: 41.61% Coil/Unstructured: 56.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF03741	TerC	6.60
PF07077	DUF1345	3.77
PF02515	CoA_transf_3	2.83
PF13409	GST_N_2	1.89
PF03631	Virul_fac_BrkB	1.89
PF07519	Tannase	0.94
PF02308	MgtC	0.94
PF03682	UPF0158	0.94
PF12969	DUF3857	0.94
PF02796	HTH_7	0.94
PF01757	Acyl_transf_3	0.94
PF13416	SBP_bac_8	0.94
PF01027	Bax1-I	0.94
PF00672	HAMP	0.94
PF02826	2-Hacid_dh_C	0.94
PF13701	DDE_Tnp_1_4	0.94
PF13610	DDE_Tnp_IS240	0.94
PF04357	TamB	0.94
PF00496	SBP_bac_5	0.94
PF00072	Response_reg	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	6.60
COG4291	Uncharacterized membrane protein	Function unknown [S]	3.77
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	2.83
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	1.89
COG1285	Magnesium uptake protein YhiD/SapB, involved in acid resistance	Inorganic ion transport and metabolism [P]	0.94
COG2911	Phospholipid transport to the outer membrane protein TamB	Cell wall/membrane/envelope biogenesis [M]	0.94
COG3174	Membrane component of predicted Mg2+ transport system, contains DUF4010 domain	Inorganic ion transport and metabolism [P]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	95.28 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	89.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	69.81 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	10.38 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	69.81 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	3.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	69.81 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	3.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	69.81 %
Azospirillum brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	2.83 %
Azospirillum baldaniorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum baldaniorum	0.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10088952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1279	Open in IMG/M
3300002245\|JGIcombinedJ26739_100239297	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300005175\|Ga0066673_10759164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	556	Open in IMG/M
3300005177\|Ga0066690_10445170	All Organisms → cellular organisms → Bacteria → Proteobacteria	877	Open in IMG/M
3300005178\|Ga0066688_10206689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1248	Open in IMG/M
3300005179\|Ga0066684_10295189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1075	Open in IMG/M
3300005434\|Ga0070709_10092804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1994	Open in IMG/M
3300005434\|Ga0070709_11200512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300005435\|Ga0070714_100069680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3038	Open in IMG/M
3300005436\|Ga0070713_100130607	All Organisms → cellular organisms → Bacteria	2214	Open in IMG/M
3300005436\|Ga0070713_100665195	All Organisms → cellular organisms → Bacteria → Proteobacteria	993	Open in IMG/M
3300005437\|Ga0070710_10114914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1622	Open in IMG/M
3300005437\|Ga0070710_10395027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	925	Open in IMG/M
3300005439\|Ga0070711_100119106	All Organisms → cellular organisms → Bacteria	1950	Open in IMG/M
3300005439\|Ga0070711_101969558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	514	Open in IMG/M
3300005471\|Ga0070698_100083400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3185	Open in IMG/M
3300005546\|Ga0070696_100756436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum baldaniorum	797	Open in IMG/M
3300005559\|Ga0066700_10661331	All Organisms → cellular organisms → Bacteria → Proteobacteria	722	Open in IMG/M
3300005575\|Ga0066702_10268938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1040	Open in IMG/M
3300005575\|Ga0066702_10711968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	598	Open in IMG/M
3300005983\|Ga0081540_1059350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1837	Open in IMG/M
3300006028\|Ga0070717_10845942	All Organisms → cellular organisms → Bacteria → Proteobacteria	832	Open in IMG/M
3300006032\|Ga0066696_10418950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	875	Open in IMG/M
3300006032\|Ga0066696_10503810	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300006163\|Ga0070715_11081841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300006173\|Ga0070716_101211722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	607	Open in IMG/M
3300006173\|Ga0070716_101212055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	607	Open in IMG/M
3300006175\|Ga0070712_100018042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4577	Open in IMG/M
3300006175\|Ga0070712_100179315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1649	Open in IMG/M
3300006175\|Ga0070712_100515823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1003	Open in IMG/M
3300006176\|Ga0070765_100761836	All Organisms → cellular organisms → Bacteria → Proteobacteria	915	Open in IMG/M
3300006804\|Ga0079221_11267776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	577	Open in IMG/M
3300006806\|Ga0079220_10608066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300006871\|Ga0075434_102232964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300007788\|Ga0099795_10080920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1243	Open in IMG/M
3300009137\|Ga0066709_100493440	All Organisms → cellular organisms → Bacteria → Proteobacteria	1723	Open in IMG/M
3300009143\|Ga0099792_10123427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1394	Open in IMG/M
3300010046\|Ga0126384_11175179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	707	Open in IMG/M
3300010047\|Ga0126382_10661048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	870	Open in IMG/M
3300010154\|Ga0127503_10172079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M
3300010362\|Ga0126377_10859801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	968	Open in IMG/M
3300010398\|Ga0126383_11842487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	693	Open in IMG/M
3300010401\|Ga0134121_12123789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300012212\|Ga0150985_116394678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1140	Open in IMG/M
3300012362\|Ga0137361_11351166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300012948\|Ga0126375_11183972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300012951\|Ga0164300_10627854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300012957\|Ga0164303_10413482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	837	Open in IMG/M
3300012957\|Ga0164303_10756250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300012961\|Ga0164302_10808578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	709	Open in IMG/M
3300012985\|Ga0164308_10828183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300018433\|Ga0066667_11843587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549	Open in IMG/M
3300018468\|Ga0066662_11147177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	781	Open in IMG/M
3300020579\|Ga0210407_10085572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2381	Open in IMG/M
3300020579\|Ga0210407_10265760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1337	Open in IMG/M
3300020579\|Ga0210407_10900869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300020580\|Ga0210403_10030484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4309	Open in IMG/M
3300020580\|Ga0210403_10084600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2560	Open in IMG/M
3300020580\|Ga0210403_10535902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	949	Open in IMG/M
3300020580\|Ga0210403_11441305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300020581\|Ga0210399_10677574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	849	Open in IMG/M
3300020582\|Ga0210395_11439855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300020583\|Ga0210401_10080089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3074	Open in IMG/M
3300020583\|Ga0210401_10181189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1962	Open in IMG/M
3300021168\|Ga0210406_11106874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300021171\|Ga0210405_10749343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	751	Open in IMG/M
3300021171\|Ga0210405_11147618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300021171\|Ga0210405_11345430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300021171\|Ga0210405_11433092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300021178\|Ga0210408_10286402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1313	Open in IMG/M
3300021178\|Ga0210408_11282653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300021180\|Ga0210396_10162019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2006	Open in IMG/M
3300021374\|Ga0213881_10142643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1047	Open in IMG/M
3300021401\|Ga0210393_11564198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300021402\|Ga0210385_10430036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	995	Open in IMG/M
3300021403\|Ga0210397_10659186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	803	Open in IMG/M
3300021420\|Ga0210394_11311681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300021432\|Ga0210384_10868325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	802	Open in IMG/M
3300021432\|Ga0210384_11110171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	694	Open in IMG/M
3300021433\|Ga0210391_11167832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300021475\|Ga0210392_11464520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300021479\|Ga0210410_10105604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2489	Open in IMG/M
3300022512\|Ga0242676_1032410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593	Open in IMG/M
3300022533\|Ga0242662_10178241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	658	Open in IMG/M
3300022720\|Ga0242672_1108230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300025320\|Ga0209171_10600515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300025906\|Ga0207699_11106845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300025915\|Ga0207693_10048816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3324	Open in IMG/M
3300025915\|Ga0207693_10056293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3083	Open in IMG/M
3300025929\|Ga0207664_10082312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2621	Open in IMG/M
3300025939\|Ga0207665_10146411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1688	Open in IMG/M
3300026490\|Ga0257153_1104986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300027174\|Ga0207948_1043343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300027605\|Ga0209329_1055630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	847	Open in IMG/M
3300027903\|Ga0209488_10655054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	756	Open in IMG/M
3300028047\|Ga0209526_10073555	All Organisms → cellular organisms → Bacteria	2406	Open in IMG/M
3300028047\|Ga0209526_10306882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1073	Open in IMG/M
3300029636\|Ga0222749_10641930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300031092\|Ga0308204_10090088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	827	Open in IMG/M
3300031753\|Ga0307477_10452888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	875	Open in IMG/M
3300031754\|Ga0307475_10262396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1385	Open in IMG/M
3300031754\|Ga0307475_11378668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300031820\|Ga0307473_10815232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300031823\|Ga0307478_11585079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300032180\|Ga0307471_100818618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1098	Open in IMG/M
3300032205\|Ga0307472_101216751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	720	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.17%
Host-Associated	Host-Associated	2.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.28%
Plants	Host-Associated → Plants	2.83%
Aquatic	Environmental → Aquatic	1.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.89%
Freshwater	Environmental → Aquatic → Freshwater	0.94%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.94%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.09%
Loam	Environmental → Terrestrial → Soil → Loam	29.25%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.94%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.94%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	21.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.94%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	19.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.89%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.94%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.94%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.94%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_100889522	3300001867	Forest Soil	WRSSCRLPIRIGGVLIAAAAFGQALAQPDDVNAIIPGGPGVLTKCRGWVVTSSCRTYHHISLPSQIAVGDTITVSFGSHPKEFRFYVARIDLKRQHCALFSKADGDRHRMDKINVAPCYRADEGR*
JGIcombinedJ26739_1002392973	3300002245	Forest Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRADEGR*
Ga0066673_107591641	3300005175	Soil	LISSGNLGPAAADQPDTVKAVTPEALGVLTKCRGWLVTRSCRTYHHIRLPSRIAVGDTITVLFGSHPKEYRFSVARIALEDDHCTILSEANGDRYHTDKINVPRCYRADEGH*
Ga0066690_104451701	3300005177	Soil	MPFRTWMAGLVIAAGTIDPAAGQPDTVEAVEPAGLGVLTKCRGWLVASSCRTYHHIRLPSRIVVGDELPISFGSHPKEFKFFVARIALKGDRCTIFSEATGERHRRDKIDITPCYPAGPAS*
Ga0066688_102066891	3300005178	Soil	MPFRTWMAGLVIAAGTIDPAAGQPDTVEAVEPAGLGVLTKCRGWLVASSCRTYHHIRLPLRIAVGDELPISFGSHPKEFKFFVARIALKSDRCTIFSEATAERHRRDKIDITPCYPAGPAS*
Ga0066684_102951892	3300005179	Soil	MPFRTWMAGLVIAAGTIDPAAGQPDTVEAVEPAGLGVLTKCRGWLVASSCRTYHHIRLPLRIAVGDELPISFGSHPKEFKFFVARIALKSDRCTIFSEATGERHRRDKISITPCYPAEPAS*
Ga0070709_100928043	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLEGRDGGIRFQYVASLARLMPLRIRIAGILIAAGAFGPAAAAQPDNVNAVTPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGDTITVSFGSHPKEFRFYVARIDLKRQHCALFSKADGNRHRMDKINVAPCYPAEEGR*
Ga0070709_112005122	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RRRLMPLRVRIDQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCSRADEGR*
Ga0070714_1000696805	3300005435	Agricultural Soil	MPLRVRIAGLLIAAGSFGAVAPDQPDTIKAVAPGGPGVLTKCRSWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAEADRHRMDKINIAPCYRSDKGR*
Ga0070713_1001306073	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRVRIAGLLIAAASFWPVAADQPDVKAVTPGGAGVLTKCRGWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKDEHCAIFSEAEGDRHRMDKINISPCYRADEGR*
Ga0070713_1006651952	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVRIAGLLIAAGSFGPVAADQPDVKAVTPGGPGVLTKCRGWLVTTSCRTYRHISLPSRIVVGDTITISFGSHPKEFGFSIARIELKGQHCAIFSKAEGDRNRMDKINITPCYRADEGR*
Ga0070710_101149143	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVRIARLLIAAGSFGAVAADQPDTIKAVAPGGPGVLTKCRSWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAEADRHRMDKINIAPCYRSDKGR*
Ga0070710_103950272	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRVRIAGLLIAAASFWPVAADQPDVKAVTPGGAGVLTKCRGWLVTTSCRTYRHISLPSRIAVGDTITISFGGHPKEFGFSVARIDLKDQHCAIFSEAEGDRHRMDKINISPCYRADEGR*
Ga0070711_1001191063	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVRIAGLLIAAGSFGPVAADQPDVKAVTPGGPGVLTKCRGWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKDQHCAIFSEAEGDRHRMDKINISPCYRADEGR*
Ga0070711_1019695581	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVRIAGLLIAAGSFGPAAANQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCSRADEGR*
Ga0070698_1000834003	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVLIAGLVIAAGGFGPAAADQPDTVNAVTPGGLGVLTKCRGWLVTSSCRTYHHISLPSRIAVGDTIAISFGSHPKEYGFSVVRIALKDDHCTIFSDADEDRQKMDKINVAPCSRADEGR*
Ga0070696_1007564361	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRIRIAGILIAAGAFGPAAAARPDNVNAIIPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGDTITVSFGSHPKEFRFYVARIDLKRQHCALFSKPDGNRHRMDKINVAPCYRADEGR*
Ga0066700_106613311	3300005559	Soil	VVELHRGFLVRLKGCDGGGRFTTWDADRRRLMLSRAWIAGLLLAASIVGPTTARESDNVEAVEPGGPGVLTKCRNWLVASSCNTYQHISLPPRIAVGDTIPVSFGSHPKEFRFFVARIALKGDHCAIFSEAHGDRHQMDKINVAPCRRAEAGR*
Ga0066702_102689382	3300005575	Soil	MPRFRIRIVGFLIAVSSLRAVAADRPDDAKVVIPGGPGVLTKCRGWVVTTSCRTYHHIALPSRIAVGDTITISFGSHPKEFAFSVARIDLKGQHCAIFSKANGDRHRMDNINIAPCYRAEEGR*
Ga0066702_107119681	3300005575	Soil	MPFRTWMAGLVIAAGTIDPAAGQPDTVEAVEPAGLGVLTKCRGWLVASSCRTYHHIRLPSRIVVGDELPISFGSHPKEFKFFVARIALKGDRCTIFSEATREKRHRRDKIDITPCYPAGPVS*
Ga0081540_10593502	3300005983	Tabebuia Heterophylla Rhizosphere	MSCCTPIVASRWPGQCRLSIRIGGILIATGAFGPAVAQSDNINAIIPGGPGVLTKCRGWVVTNTCRTYNHISLPSRIAVGDTITVSFGSHPKEVKFYVARIDLKRQHCALFSKAYGDRHRMDKINVAPCYWADKGR*
Ga0070717_108459422	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVLIAGLVIAAGGFGPAAADQPDTVNAVTPGGLGVLTKCRGWLVTSSCRTYHHISLPSRIAVGDTIAISFGSHPKEYGFSVVRIALKDDHCTIFSDA
Ga0066696_104189502	3300006032	Soil	MPRFHIRIVGFLIAVSSFGAVAADRPDDAKPVIPGGPGVLTKCRGWVVTTSCRTYHHIALPSRIAVGDTITISFGSHPKEFAFSVARIDLKGQHCAIFSKANGDRHRMDKINIAPCYRAGEER*
Ga0066696_105038102	3300006032	Soil	MPFRTWMAGLVIAAGTIDPAAGQPDTVEAVEPAGLGVLTKCRGWLVASSCRTYHHIRLPLRIAVGDELPISFGSHPKEFKFFVARIALKSDRCTIFSEATGERHRRDKIDITPCYPAGPAS*
Ga0070715_110818412	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVRIAGLLIAAGSFGPAAADQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAE
Ga0070716_1012117221	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GSFGAVAPDQPDTIKAVAPGGPGVLTKCRSWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAEADRHRMDKINIAPCYRSDKGR*
Ga0070716_1012120552	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	PMPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRADEGR*
Ga0070712_1000180428	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVRIAGLLIAAGSFGPAAADQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCSRADEGR*
Ga0070712_1001793151	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRVRIAGLLIAAASFWPVAADQPDVKAVTPGGAGVLTKCRGWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKDQHCAIFSEAEGDRHRMDKINISPCYRADEGR*
Ga0070712_1005158232	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	PVAADQPDVKAVTPGGPGVLTKCRGWLVTTSCRTYRHISLPSRIVAGDTITISFGSHPKEFGFSIARIELKGQHCAIFSKAEGDRNRMDKINITPCYRADEGR*
Ga0070765_1007618362	3300006176	Soil	RRPMPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEYRFSVARIALKDDRCTIVSDADEDRQKIDKINVAPCYRADEGR*
Ga0079221_112677761	3300006804	Agricultural Soil	YCTSIVASRWRSSCRLPIRIGGVLIAAAAFGQALAQPDDVNAIIPGGPGVLTKCRGWVVTSSCRTYHHISLPSQIAVGDTITVSFGSHPKEFRFYVARIDLKRQHCALFSKADGDRHQMDKINVAPCYRADEDADAPQRFGVWR*
Ga0079220_106080662	3300006806	Agricultural Soil	MRLIPLRFWIAGLLISSGNLGPAAADQPDTVKAVTPEALGVLTKCRGWLVTRSCRTYHHIRLPSRIAVGDTITVLFGSHPKEYRFSVARIALEDDHCTILSEANGDLYHTDKIKVPRCYRADEVH*
Ga0075434_1022329642	3300006871	Populus Rhizosphere	MAGLLIALGSFGPAAADEPDAVKAVTPEGPGVLTKCRGWLVTSTCRTYRQISLPSRIAVGDTITISFGSHPKEFRFPVARIDLKAQHCAIFSKADGDRHRMDKINVAPCYRAD*
Ga0099795_100809201	3300007788	Vadose Zone Soil	LIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCTIFSKAEGDHHLDRINVAPCYRADE
Ga0066709_1004934402	3300009137	Grasslands Soil	MPFRTWMAGLVIAAGTIDPAASQPDTVEAVEPAGLGVLTKCRGWLVASSCRTYHHIRLPSRIVVGDELPISFGSHPKEFKFFVARIALKSDRCTIFSEATGERHRRDKIDITPCYPAGPAS*
Ga0099792_101234271	3300009143	Vadose Zone Soil	MRLIPLRFWIAGLLISSGNLGPAAADQPNTVKAVTPEALGVLSKCRGWLVTRSCRTYHHIRLPSRIAVGDTITVLFGSHPKEYRFSVARIALEDDHCTILSEANGDRYHTDKIKVRRCYQADEVH*
Ga0126384_111751791	3300010046	Tropical Forest Soil	MLEGRDGGITFQSVASLARLMPLRMPIAGILIAAGAVGPAAFAQPDNVNAIIPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGNTFTVSFGSHPKEFRFYVARIDLKRLSGPVV*
Ga0126382_106610482	3300010047	Tropical Forest Soil	MTLPIGIAGILIAAGAVGPAAAAQPDNVNAIIPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGDTITVSFGSHPKEFRFYVARIDFKRQHCALFSKADGNRHRMDKINVAPCYRAGEGR*
Ga0127503_101720792	3300010154	Soil	MPPRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGAGVLTKCRGWVVTSSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRADEGR*
Ga0126377_108598012	3300010362	Tropical Forest Soil	MTLPIGIAGILIAAGAVGPAAAAQADNVNAIIPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGDTITVSFGSHPKEFRFYVARIDFKRQHCALFSKADGNRHRMDKINVAPCYRAGEGR*
Ga0126383_118424872	3300010398	Tropical Forest Soil	WMLEGRDGGITFQSVASLARLMPLRMPIAGILIAAGAVGPAAFAQPDNVNAIIPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGDTITVSFGSHPKEFRFYVARIDFKRQHCALFSKADGNRHRMDKINVAPCYRAGEGR*
Ga0134121_121237891	3300010401	Terrestrial Soil	LLIAAGSFGSAAADQPDTVKAVTPGGPGVLTKCRGWLVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAKADRHRMDKINIAPCYRSDKGR*
Ga0150985_1163946781	3300012212	Avena Fatua Rhizosphere	MRLIPLRFWIAGLLISSGNLGPAAADQPDTVKAVTPEALGVLTKCRGWLVTRSCRTYHHIRLPSRIAVGDTITVLFGSHPKEYRFSVARIALEDDHCTILSEANGDRYHTDKIKVPRCYRADEVH*
Ga0137361_113511661	3300012362	Vadose Zone Soil	MPLRVRIAGLLIAAGNFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRPD
Ga0126375_111839721	3300012948	Tropical Forest Soil	AGILIAAGAVGPAAAAQPDNVNAIIPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGDTITVLFGSHPKEFRFYVARIDFKRQHCALFSKADGNRHRMDKINVAPCYRADEGR*
Ga0164300_106278541	3300012951	Soil	MLEGRDGGIRFQYVASLARLMPLRIRIAGILIAAGAFGPAAAAQPDNVNAVTPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGDTITVSFGSHPKEFRFYVARIDLKRQHCA
Ga0164303_104134822	3300012957	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCHRADEGR*
Ga0164303_107562501	3300012957	Soil	MLEGRDGGIRFQYVASLARLMPLRIRIAGILIAAGAFGPAAAAQPDNVNAVTPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGDTITVSFGSHPKEFRFYVARIDLKRQHCALFSKADGNRHRMDKINVAPC
Ga0164302_108085781	3300012961	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTSGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRADEGR*
Ga0164308_108281832	3300012985	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKDEHCAIFSEAEGDRHRMDKINISPSYRADEGR*
Ga0066667_118435872	3300018433	Grasslands Soil	MPFRTWMAGLVIAAGTIDPAASQPDTVEAVEPAGLGVLTKCRGWLVASSCRTYHHIRLPSRIVVGDELPISFGSHPKEFKFFVARIALKGDRCTIFSEATGERHRRDKI
Ga0066662_111471771	3300018468	Grasslands Soil	MRLIPLRFWIAGLLISSGNLGPAAADQPNTVKAVTPEALGVLSKCRGWLVTRSCRTYHHIRLPSRIAVGDTITILFNSHPKEYRFSVARIALEDDHCTILSEANGDRYHTDKINVPRCYRADEGH
Ga0210407_100855721	3300020579	Soil	FGPVAAGQPDTVEAVTPGGPGVLTKCRSWLVTTSCRTYRHINLPSQIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAEGDRHRMDKINIAPCYRSDEGR
Ga0210407_102657602	3300020579	Soil	LKGRDGEGRLQHVALDWRRPMPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRADEGR
Ga0210407_109008691	3300020579	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCSRADEGR
Ga0210403_100304843	3300020580	Soil	MPLRVRIAGLLIAAGGFGPAAADQPDTANAVIPGGAGVLPKCRGWLVTSSCQTYHHISLPSRIAVGDTITISFGSHPKEYRFSVARIALKDDLCTIVSDADEDRQKIDKINVAPCYRADEGR
Ga0210403_100846004	3300020580	Soil	MPLRVRIAGLLIAVGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCEIFSKAEGDRHLDKINVAPCYGADEG
Ga0210403_105359021	3300020580	Soil	MPPRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGAGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRADEG
Ga0210403_114413051	3300020580	Soil	AADQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCSRADEGR
Ga0210399_106775742	3300020581	Soil	MSHSIARRLMPLRVRIAGLLIAAGSFGPAAADQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCYRADEGR
Ga0210395_114398551	3300020582	Soil	DQPDDVKAAIPGGPGVLTKCRGWLMTTSCRTYHHISLPSRIAVGDTITITFGNDPKEFGFFVARIDLTGQHCAIFSKADGDRHRMDKINVAPCSRADEGR
Ga0210401_100800892	3300020583	Soil	MPLPIRITGLLIAAGSFGPAAADQPDIVEAVIPGGSGVLTKCRGWLVTTSCRSYHHIRLPSRIAVGDTITMLFASHPKQFGFSVARIELKGQHCAILSGADGDRHRMDKIDVAPCYRADEER
Ga0210401_101811893	3300020583	Soil	MPLRVRIAGLLIAAGGFGPAAADQPDTANAVIPGGAGVLTKCRGWLVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEYRFSVARIALKDDLCTIVSDADEDRQKSDKINVAPCYRADEGR
Ga0210406_111068741	3300021168	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRADEG
Ga0210405_107493431	3300021171	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCEIFSKAEGDRHLDKINVAPCYGADEG
Ga0210405_111476182	3300021171	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCYRADEGR
Ga0210405_113454301	3300021171	Soil	VRLAHGLDGHRTPVVATRGAERDRRRLMPLRVRIAGLLIAAGGFGPAAADQPDTANAVIPGGAGVLTKCRGWLVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEYRFSVARIALKDDLCTIVSDADEDRQKSDKINVAPCYRADEGR
Ga0210405_114330921	3300021171	Soil	MLLCVRIASLLIAAGSFGPVAAGQPDTVEAVTPGGPGVLTKCRSWLVTTSCRTYRHINLPSQIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAEGDRHRMDKINIAPCYRSDEGR
Ga0210408_102864021	3300021178	Soil	MPRFHIRIVGFLIAVSSFGAVAADQPDDAKAVIPGGPGVLTKCRGWVVTTSCRTYHHIALPSRIAVGDTITISFGSHPKEFAFSVARIDLKGHHCAIFSKANGDRHRMDKINIAQCNRAEEGR
Ga0210408_112826531	3300021178	Soil	MPLRIRIAGFLIAAGSLGPGAADQPDTVKAVTPGGPGVLTKCRGWLVTTTCRTYSHISLPSRIAVGDTITILFGSHPKEFGFFVARIDLKGQHCAIFSEAEGDRHRMTRST
Ga0210396_101620191	3300021180	Soil	IRIAGFLIAAGSLGPGAADQPDTVKAVTPGGPGVLTKCRGWLVTTTCRTYSHISLPSRIAVGDTITILFGSHPKEFGFFVARIDLKGQHCAIFSEAEGDRHRMDKIDVAPCHPADEGR
Ga0213881_101426431	3300021374	Exposed Rock	MARADPMRGAGSAKVMPLRIQIVGLWISASICGAAAADQSKVVKAVTLEGPGILTKCRGWLVTTSCRTYHHITLPSRIAVGDTIRISFGSHPKEFGFHVARIDFNGQQCAIFSEAEGDRQLTDKINVAPCYSADKGR
Ga0210393_115641981	3300021401	Soil	AAGSFGPAAGDQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCYRADEGR
Ga0210385_104300362	3300021402	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKISVARVT
Ga0210397_106591862	3300021403	Soil	MPRFHIRIVGFLIAVSSFGAVAADQPDDAKAVIPGGPGVLTKCRGWVVTTSCRTYHHIALPSRIAVGDTITISFGSHPKEFAFSVAQIDLKGPHCAIFSKANGDRHRMDKINIAQCNRAEEGR
Ga0210394_113116811	3300021420	Soil	RIAGFLIAAGSLGPGAADQPDTVKAVTPGGPGVLTKCRGWLVTTTCRTYSHISLPSRIAVGDTITILFGSHPKEFGFFVARIDLKGQHCAIFSEAEGDRHRMDKIDVAPCHPADEGR
Ga0210384_108683252	3300021432	Soil	AVAADQPDDAKAVIPGGPGVLTKCRGWVVTTSCRTYHHIALPSRIAVGDTITISFGSHPKEFAFSVARIDLKGHHCAIFSKANGDRHRMDKINIAQCNRAEEGR
Ga0210384_111101711	3300021432	Soil	RDLSLDWLKGRDGEGRFNMSHYRRRLMPLRVRIAGLLIAAGSFGPAAADQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCSRADEGR
Ga0210391_111678321	3300021433	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYWADEG
Ga0210392_114645202	3300021475	Soil	TLRVRIAGLLIAAGSFGAVAPDQPDTIKAVAPGGPGVLTKCRSWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAEADRHRMDKINIAPCSVR
Ga0210410_101056041	3300021479	Soil	LIAAGSFGAVAPDQPDTIKAVAPGGPGVLTKCRSWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAEADRHRMDKINIAPCSVR
Ga0242676_10324101	3300022512	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLNGQDCAIFSKAEGDRHRMDKINVAPCYQTDEGR
Ga0242662_101782411	3300022533	Soil	MPPRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGAGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHRMDKINIAPCYRSDEGR
Ga0242672_11082301	3300022720	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGAGVLTKCRGWVVTSSCRTYHHISLSSRIAVGDTITISFGGHPKEFGFSAARIDLKGQHCAIFSKAEGDRHLDKINVAPCYR
Ga0209171_106005152	3300025320	Iron-Sulfur Acid Spring	VRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCYRADKER
Ga0207699_111068451	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVRIAGLLIAAGSFGPVAADQSDVKAVTPGGPGVLTKCRGWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKDEHCAIFSEAEGDRHRMDKINISPCYRADEG
Ga0207693_100488164	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLEGRDGGIRFQYVASLARLMPLRIRIAGILIAAGAFGPAAAAQPDKVNAVTPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGDTITVSFGSHPKEFRFYVARIDLKRQHCALFSKADGNRHRMDKINVAPCYPAEEGR
Ga0207693_100562933	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRVRIAGLLIAAASFWPVAADQPDVKAVTPGGPGVLTKCRGWLVTTSCRTYRHISLPSRIVAGDTITISFGSHPKEFGFSIARIELKGQHCAIFSKAEGDRNRMDKINITPCYRADEG
Ga0207664_100823123	3300025929	Agricultural Soil	MPLRVRIAGLLIAAGSFGAVAPDQPDTIKAVAPGGPGVLTKCRSWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAEADRHRMDKINIAPCYRSDKGR
Ga0207665_101464111	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVRIAGLLIAAGSFGPVAADQPDVKAVTPGGPGVLTKCRGWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEADRHRMDKINIAPCYRSDKG
Ga0257153_11049861	3300026490	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKSVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGD
Ga0207948_10433431	3300027174	Forest Soil	MPLRVRIAGLLIAAGSFGPAAGDQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCYRADEGR
Ga0209329_10556302	3300027605	Forest Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCEIFSKAEGDRHLDKINVAPCYRADEG
Ga0209488_106550541	3300027903	Vadose Zone Soil	MPLRVRIGGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDRINVAPCYRADEG
Ga0209526_100735554	3300028047	Forest Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDRINVAPCYRADEG
Ga0209526_103068821	3300028047	Forest Soil	MARQIQHVALDRRRVMALRVRIAGLLIAAGSFSPASADQPDTVKAVTPGGPGVLTKCRGWLVTSSCRTYHHISLPSRIAVGDAITILFGSHPKEYRFAVTRIALKDDHCTIFSDPDEDRHQMDKIDVAPCYRADKGR
Ga0222749_106419301	3300029636	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGAGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSPPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRADEG
Ga0308204_100900881	3300031092	Soil	MSLRVRMAGLLIALGSFGPAAADEPDAVKAVTPGGPGVLTKCRGWLVTSTCRTYRQISLPSRIAVGDTITIRFGSHPKEFRFPVARIDLKAQHCAIFSKADGDRHRMDKINVAPCYRAD
Ga0307477_104528882	3300031753	Hardwood Forest Soil	IAGFLIAAGSLGPGAADQPDTVKAVTPGGPGVLTKCRGWLVTTTCRTYSHISLPSRIAVGDTITILFGSHPKEFGFFVARIDLKGQHCAIFSEAEGDRHRMDKIDVAPCHPADEGR
Ga0307475_102623962	3300031754	Hardwood Forest Soil	MPLRVRIAGLLIAVGSFAPAAADRPDTVNAVTPGGPGVLTKCRGWLVTTSCRTDHHISLPSRIAVGDTITISFGSHPKEFGLWVARIDLKGEHCAIFSNAAGDRHRMDKINVAPCYRAHEGR
Ga0307475_113786681	3300031754	Hardwood Forest Soil	MPLCARIAGLLITAGSLGAVAADQPDTIEAVTPGGPGVLTKCRSWLVTTSCRTYRHISLPSRIAVGNTITISFGSHPKEFGFHVARIDLKGQHCAIFSKAEGDRHRMDKINVAPC
Ga0307473_108152321	3300031820	Hardwood Forest Soil	TLAGPHWLKGRDGEGRLQHVAFDRRKPMPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGGHPKEFGFSVARIDLKDQHCAIFSEAEGDRHRMDKINISPCYRADEGR
Ga0307478_115850792	3300031823	Hardwood Forest Soil	RSNDRRRLMPLRVRIAGLLIAVGSFAPAAADRPDTVNAVTPGGPGVLTKCRGWLVTTSCRTDHHISLPSRIAVGDTITISFGSHPKEFGLWVARIDLKGEHCAIFSNAAGDRHRMDKINVAPCYRAHEGR
Ga0307471_1008186183	3300032180	Hardwood Forest Soil	LCVRIASLLIAAGSFGPVAAGQPDTVEAVTPGGPGVLTKCRSWLVTTSCRTHRHISLPSRIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAEADRHRMDKINIAPCYRSDKGR
Ga0307472_1012167511	3300032205	Hardwood Forest Soil	MPLRVRIDQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCSRADEGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094429

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences