Basic Information | |
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Family ID | F094424 |
Family Type | Metagenome |
Number of Sequences | 106 |
Average Sequence Length | 53 residues |
Representative Sequence | MVVKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPRDVFQFIKRTCQ |
Number of Associated Samples | 82 |
Number of Associated Scaffolds | 106 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Viruses |
% of genes with valid RBS motifs | 71.70 % |
% of genes near scaffold ends (potentially truncated) | 29.25 % |
% of genes from short scaffolds (< 2000 bps) | 72.64 % |
Associated GOLD sequencing projects | 70 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.68 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Duplodnaviria (63.208 % of family members) |
NCBI Taxonomy ID | 2731341 |
Taxonomy | All Organisms → Viruses → Duplodnaviria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (27.359 % of family members) |
Environment Ontology (ENVO) | Unclassified (83.019 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (86.792 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 17.07% β-sheet: 28.05% Coil/Unstructured: 54.88% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.68 |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Marine Deep Ocean Marine Marine Seawater Marine Marine Aqueous Seawater Sackhole Brine Marine Sea-Ice Brine Marine Marine Marine Pelagic Marine Seawater Pelagic Marine Marine Seawater |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Zoom: | Powered by OpenStreetMap |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSum2010_100499781 | 3300000101 | Marine | MVIKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRTCQ* |
DelMOSum2010_100925112 | 3300000101 | Marine | MIIKKVTNSIFDVFWKDGWDNCIRIKSNGSKEYRIIKAYKKPPRDVFQFIKGAIK* |
DelMOSum2010_101690851 | 3300000101 | Marine | WKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRTCQ* |
DelMOSum2011_100032022 | 3300000115 | Marine | MEYVMVVKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRTCQ* |
DelMOSum2011_100820751 | 3300000115 | Marine | FDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRTCQ* |
DelMOSum2011_101955313 | 3300000115 | Marine | MIIKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKD |
DelMOSpr2010_1000310117 | 3300000116 | Marine | MVVKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQF |
DelMOSpr2010_101129583 | 3300000116 | Marine | MIIKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRTCQ* |
DelMOWin2010_100214084 | 3300000117 | Marine | MVIKNVTNNLFDVFWKDGWDNCIRVKKVGQDFRVVKAFKKPPKDVFQFIKGECL* |
SI60aug11_100mDRAFT_10252672 | 3300000192 | Marine | MIIKNVTNNLFDVFWKDGWDNCIRVKRIGKDFRVVKAYKKPPRDVFQFIKRTCQ* |
JGI20155J14468_100431931 | 3300001354 | Pelagic Marine | YMEYVMIIKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRTCQ* |
JGI24006J15134_1000037637 | 3300001450 | Marine | MLVKKITNNLFDVFWKDGWENCVRIKKNEIDFRIVRAYKKPPRVVLEYIKEKLI* |
JGI24006J15134_100424064 | 3300001450 | Marine | MVVKNVTNNLFDVFWKDGWDNCIRVKKIGQDFRVIKAFKKPPKDVFQFIKGECL* |
JGI24006J15134_100633582 | 3300001450 | Marine | MVIKHITRNLFDVFWKDGWDNCVRIKRSGSSFRVIKAYKKPPRDVFEFIKGECK* |
JGI24006J15134_101206092 | 3300001450 | Marine | MVIKYITKNLFDVFWKDGWDNCVRIKRNGDSFRVIRAYKKPPRDVFEFIKGACK* |
JGI24003J15210_100119296 | 3300001460 | Marine | MVVKNVTNNLFDVFWKDGWDNCIRVKKIGQDFRVVKAFKKPPKDVFQFIKGECL* |
Ga0055584_1003320511 | 3300004097 | Pelagic Marine | VTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRTCQ* |
Ga0066606_100421532 | 3300004280 | Marine | MVIRNVTNNLFDVFWKDGWDNCIRVKRIGKDFRVVKAYKKPPRDVFQFIKRTCQ* |
Ga0065861_11124831 | 3300004448 | Marine | GVYVMVVKHITKNLFDVFWKDGWDNCVRIKRSGSSFRVIKAYKKPPRDVFEFIKGACK* |
Ga0066222_11973701 | 3300004460 | Marine | MVVRYITKNLFDVFWKEGWDNCVRIKRIDHSFRVIKAYKKPPRDVFEFIKGACK* |
Ga0075466_10542492 | 3300006029 | Aqueous | MVVKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPRDVFQFIKRTCQ* |
Ga0075441_100043162 | 3300006164 | Marine | MLIKHITKNLFDVFWKTGWDNCVRIKRNGEAFRVIKAYKKPPQDVFKFIKESIK* |
Ga0075446_101340952 | 3300006190 | Marine | MLIKHITKNLFDVFWKTGWENCVRVKRNGDAFRVIKAYKKPPQDVFKFIKESIK* |
Ga0075445_101340872 | 3300006193 | Marine | MVVRHITKNLVDVFWKDGWDNCVRIKRKDQSFRVIKAYKKPPREVFEFLKGAFK* |
Ga0070749_101134842 | 3300006802 | Aqueous | MVIKHVTNNLFDVFWKEGWDNCVRVKRIKSSFVIVKAWRKPPKDLFSFLKGAFK* |
Ga0070750_100399755 | 3300006916 | Aqueous | MEYVMIIKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRTCQ* |
Ga0070748_13389012 | 3300006920 | Aqueous | MVVKHITRNLFDVFWKDGWDNCVRIKRSGSSFRVIKAYKKPPRDVFEFIKGECK* |
Ga0098060_11535501 | 3300006921 | Marine | MEYVMVIRNVTNNLFDVFWKDGWDNCVRVKKVGSDFRVVKAFKRPPKDVFQFIKRTCQ* |
Ga0075444_101012264 | 3300006947 | Marine | MLIKYISKNLFDVFWKTGWDNCVRVKVKDNEFRVIKAYKKPPQDVFKFIKESIR* |
Ga0075444_102127862 | 3300006947 | Marine | MVIKYITKNLFDVFWKTGWENCVRVKRDKDSFRVIRAYKKPPQDVFKFIKESIK* |
Ga0070747_13378482 | 3300007276 | Aqueous | MVVKNVTNNLFDVFWKDGWDNCIRVKKVGQDFRVVKAFKKPPKDVFQFIKGECL* |
Ga0070752_10631382 | 3300007345 | Aqueous | DVFWKDGWDNCIRIKSNGSKEYRIIKAYKKPPRDVFQFIKGAIK* |
Ga0099847_10282993 | 3300007540 | Aqueous | MEYVMIIKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRT |
Ga0099847_10434941 | 3300007540 | Aqueous | MEYVMVIKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRT |
Ga0114996_101031642 | 3300009173 | Marine | MVIRHITKNLFDVFWKDGWDNCVRIKRKGDSFRVIKAYKKPPRDVFEYIKGVCK* |
Ga0114996_104604972 | 3300009173 | Marine | MVIRHITKNLFDVFWKDGWDNCVRIKRKTDSFRVIKAYKKPPQEVFKYIKEICK* |
Ga0114994_102437493 | 3300009420 | Marine | MVIRHITKNLFDVFWKDGWDNCVRIKRKADSFRVIKAYKKPPQEVFKYIKEICK* |
Ga0114997_103206414 | 3300009425 | Marine | MVVRHITKNLFDVFWKDGWENCVRIKRKADSFRVIKAYKKPPQEVFKYIKGICK |
Ga0114915_10074022 | 3300009428 | Deep Ocean | MLIKHITKNLFDVFWKTGWENCVRVKRNGDAFRVIKAYKKPPQDVFKFIKESFK* |
Ga0115545_11069171 | 3300009433 | Pelagic Marine | MVVKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRT |
Ga0115545_12467823 | 3300009433 | Pelagic Marine | DVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRTCQ* |
Ga0115000_100853652 | 3300009705 | Marine | MVIRHITKNLFDVFWKEGWDNCVRIKRIDHSFRVIKAYKKPPRDVFEFIKGACK* |
Ga0115002_105216813 | 3300009706 | Marine | MVVRHITKNLFDVFWKDGWDNCVRIKRKADSFRVIKAYKKPPQEVFKYIKEICK* |
Ga0118731_1045588302 | 3300010392 | Marine | MVVKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRTCQ* |
Ga0133547_103730342 | 3300010883 | Marine | MVIRYITKNLFDVFWKDGWENCVRIKRKADSFRVIKAYKKPPQEVFKYIKEICK* |
Ga0133547_104143642 | 3300010883 | Marine | MVVRHITKNLFDVFWKDGWDNCVRIKRSGSSFRVIKAYKKPPRDVFEFIKGACK* |
Ga0133547_107907641 | 3300010883 | Marine | MVVRHITKNLFDVFWKDGWDNCVRIKRKADSFRVIKAYKKPPQEVFKYIKEI |
Ga0151672_10263622 | 3300011129 | Marine | MIIKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPRDVFQFIKRTCQ* |
Ga0151674_10071927 | 3300011252 | Marine | MEYVMIIKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPRDVFQFIKRTCQ* |
Ga0181412_10128753 | 3300017714 | Seawater | MVVKNVTNNLFDVFWKDGWDNCVRVKRIGSDFRVVKAYKKAPRDVFQFIKRECL |
Ga0181419_10559872 | 3300017728 | Seawater | MEYVMVVKNVTNNLFDVFWKDGWDNCVRVKRIGKDFRVVKAYKKAPRDVFQFIKRECL |
Ga0181419_11418222 | 3300017728 | Seawater | MVVKNVTNNLFDVFWKDGWDNCIRVKKVGQDFRVVKAFKKPPKDVFQFIKGECL |
Ga0181421_11928682 | 3300017741 | Seawater | MIVKNVTNNLFDVFWKDGWDNCIRVKKVGQDFRVVKAFKKPPKDVFQFIKGECL |
Ga0181397_10052522 | 3300017744 | Seawater | MVVKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPRDVFQFIKRTCQ |
Ga0181420_10403021 | 3300017757 | Seawater | IIKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPRDVFQFIKRTCQ |
Ga0181410_10831691 | 3300017763 | Seawater | FDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPRDVFQFIKRTCQ |
Ga0181386_11178282 | 3300017773 | Seawater | LFDVFWKDGWDNCVRIKRKDKSFRIVRAWKKPPRDVFEFIKGECK |
Ga0211554_101695761 | 3300020431 | Marine | ASSSLLNSCDSQIKKVTNSIFDVFWKDGWDNCIRIKSNGSKEYRIIKAYKKPPRDVFQFIKGAIK |
(restricted) Ga0233433_1000046250 | 3300022931 | Seawater | MVIRNVTNNLFDVFWKDGWDNCIRVKRIGKDFRVVKAYKKPPRDVFQFIKRTCQ |
(restricted) Ga0255050_100806241 | 3300024052 | Seawater | MVIRYVTKNLFDVFWKDGWENCVRIKRKDDSFRVIKAYKKPPQEVFKYIKEIYK |
(restricted) Ga0255051_101728244 | 3300024057 | Seawater | MVIRYVTKNLFDVFWKDGWENCVRIKRKDDSFRVIKAYKKPPQEVFKYIKEIYKXNQ |
Ga0228637_10494892 | 3300024192 | Seawater | MVVRNVTNNLFDVFWKDGWDNCVRVKRIGKDFRVVKAFKKPPRDVFQFIKRNCL |
(restricted) Ga0233444_101037465 | 3300024264 | Seawater | MVVRNVTNNLFDVFWKEGWDNCVRVKRIGKDFRVVKAFKKPPRDVFQFIKRNCL |
Ga0228631_10386621 | 3300024329 | Seawater | IKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPRDVFQFIKRSCQ |
Ga0207896_10468811 | 3300025071 | Marine | VFWKDGWENCVRIKKNEIDFRIVRAYKKPPRVVLEYIKEKLI |
Ga0207890_10128632 | 3300025079 | Marine | MVVKNVTNNLFDVFWKDGWDNCIRVKKIGQDFRVVKAFKKPPKDVFQFIKGECL |
Ga0209634_11272743 | 3300025138 | Marine | MLVKKITNNLFDVFWKDGWENCVRIKKNEIDFRIVRAYKKPPRVVLEYIKEKLI |
Ga0209337_10034223 | 3300025168 | Marine | MVVKNVTNNLFDVFWKDGWDNCIRVKKIGQDFRVIKAFKKPPKDVFQFIKGECL |
Ga0209337_10290022 | 3300025168 | Marine | MVIKHITRNLFDVFWKDGWDNCVRIKRSGSSFRVIKAYKKPPRDVFEFIKGECK |
Ga0209337_10312592 | 3300025168 | Marine | MVIKYITKNLFDVFWKDGWDNCVRIKRNGDSFRVIRAYKKPPRDVFEFIKGACK |
Ga0209337_11465183 | 3300025168 | Marine | MVIKHITKNLFDVFWKDGWDNCVRIKRNGNSFRVIRAYKKPPRDVFEFIKGACK |
Ga0209337_12113323 | 3300025168 | Marine | MIVAKNITNNLLDVFWKDGWDNCVRIKKQGKEFKIVKAYKKPPREVFSYIRTFCHEKRSQ |
Ga0208032_11104322 | 3300025266 | Deep Ocean | MLIKHITKNLFDVFWKTGWDNCVRIKRNGEAFRVIKAYKKPPQDVFKFIKESIK |
Ga0208303_10004937 | 3300025543 | Aqueous | MIIKKVTNSIFDVFWKDGWDNCIRIKSNGSKEYRIIKAYKKPPRDVFQFIKGAIK |
Ga0208643_10278953 | 3300025645 | Aqueous | WKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRTCQ |
Ga0209305_11096141 | 3300025712 | Pelagic Marine | KNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRTCQ |
Ga0208767_10083365 | 3300025769 | Aqueous | MIIKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRTCQ |
Ga0208645_11220403 | 3300025853 | Aqueous | MVIKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRT |
Ga0209630_1000810617 | 3300025892 | Pelagic Marine | MIIKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRTC |
Ga0209630_100343987 | 3300025892 | Pelagic Marine | MVVKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFI |
Ga0209630_100584473 | 3300025892 | Pelagic Marine | DVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPKDVFQFIKRTCQ |
Ga0228620_10263841 | 3300026483 | Seawater | MVVRNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPRDVFQFIKRSCQ |
Ga0228607_10975152 | 3300026517 | Seawater | MVVRNVTNNLFDVFWKDGWDNCVRVNRIGKDFRVVKAFKKPPRDVFQFIKRNCL |
Ga0209384_11278492 | 3300027522 | Marine | MLIKHITKNLFDVFWKTGWENCVRVKRNGDAFRVIKAYKKPPQDVFKFIKESIK |
Ga0209383_12348462 | 3300027672 | Marine | MVVRHITKNLVDVFWKDGWDNCVRIKRKDQSFRVIKAYKKPPREVFEFLKGAFK |
Ga0209816_10361981 | 3300027704 | Marine | IKHITKNLFDVFWKTGWENCVRVKRDKDSFRVIRAYKKPPQDVFKFIKESIK |
Ga0209709_100030253 | 3300027779 | Marine | MVIRHITKNLFDVFWKDGWDNCVRIKRKTDSFRVIKAYKKPPQEVFKYIKEICK |
Ga0209709_102015293 | 3300027779 | Marine | MVIRHITKNLFDVFWKDGWDNCVRIKRKGDSFRVIKAYKKPPRDVFEYIKGVCK |
Ga0209709_102246692 | 3300027779 | Marine | KHITKNLFDVFWKDGWDNCVRIKRSGSSFRVIKAYKKPPRDVFEYIKGECK |
Ga0209091_103298432 | 3300027801 | Marine | MVIRHITKNLFDVFWKEGWDNCVRIKRIDHSFRVIKAYKKPPRDVFEFIKGACK |
Ga0209090_100197318 | 3300027813 | Marine | MVIRHITKNLFDVFWKDGWDNCVRIKRKGDSFRVIKAYKKPPRDVFEYIKGVCKXNQLVLLVFVTNIL |
Ga0209403_103317283 | 3300027839 | Marine | MVVRHITKNLFDVFWKDGWDNCVRIKRKADSFRVIKAYKKPPQEVFKYIKEICK |
(restricted) Ga0233413_100415951 | 3300027996 | Seawater | VTNNLFDVFWKDGWDNCIRVKRIGKDFRVVKAYKKPPRDVFQFIKRTCQ |
Ga0228674_10721722 | 3300028008 | Seawater | MEYVMVIKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPRDVFQFIKRSCQ |
Ga0256382_10878092 | 3300028022 | Seawater | MVIRYITKNLFDVFWKDGWDNCVRIKRKGTSFRVVRAWKKPPRDVFEFIKGECK |
Ga0257118_10721662 | 3300028173 | Marine | MVVKNVTNNLFDVFWKDGWDNCIRVKRIGKDFRVVKAYKKPPRDVFQFIKRTCQ |
Ga0257127_10407244 | 3300028189 | Marine | MIIKNVTNNLFDVFWKDGWDNCIRVKRIGKDFRVVKAYKKPPRDVFQFIKRTCQXKQLLI |
Ga0257121_10873122 | 3300028198 | Marine | MIIKNVTNNLFDVFWKDGWDNCIRVKRIGKDFRVVKAYKKPPRDVFQFIKRTCQ |
Ga0308024_11662052 | 3300031140 | Marine | MVVRHITKNLVDVFWKDGWDNCVRIKRKDQSFRVIKAYKKPPQDVFKFIKESFK |
Ga0307488_105074922 | 3300031519 | Sackhole Brine | MVVKHITKNLFDVFWKDGWDNCVRIKRSGSSFRVIKAYKKPPRDVFEFIKGACK |
Ga0307489_109327682 | 3300031569 | Sackhole Brine | MVIKHITKNLFDVFWKDGWDNCVRIKRSGSSFRVIKAYKKPPRDVFEFIKGACK |
Ga0307993_11313432 | 3300031602 | Marine | MVVRHITKNLVDVFWKDGWDNCVRIKRKDQSFRVIKAYKKPPQDVFKFIKESIK |
Ga0307985_103293961 | 3300031629 | Marine | IKHITKNLFDVFWKTGWDNCVRIKRNGEAFRVIKAYKKPPQDVFKFIKESIK |
Ga0310124_106666612 | 3300031804 | Marine | MVIRHITKNLFDIFWKDGWENCVRIKRKADSFRVIKAYKKPPQEVFKYIKEICK |
Ga0314858_079398_55_219 | 3300033742 | Sea-Ice Brine | MVIKHITKNLFDVFWKDGWDNCVRIKRSGSRFRVIKAYKKPPRDVFEYIKGECK |
Ga0314858_086767_2_145 | 3300033742 | Sea-Ice Brine | MVIKNVTNNLFDVFWKDGWDNCVRVKKIGSDFRVVKAFKRPPRDVFQF |
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