Basic Information | |
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Family ID | F094422 |
Family Type | Metagenome |
Number of Sequences | 106 |
Average Sequence Length | 55 residues |
Representative Sequence | MKKYIIESDTPLFDFTLEYPRIHIDMEYAATLSRFALLSYLDEEFMFYHERIDR |
Number of Associated Samples | 67 |
Number of Associated Scaffolds | 106 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 40.00 % |
% of genes near scaffold ends (potentially truncated) | 19.81 % |
% of genes from short scaffolds (< 2000 bps) | 78.30 % |
Associated GOLD sequencing projects | 49 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (77.358 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (32.075 % of family members) |
Environment Ontology (ENVO) | Unclassified (86.792 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (92.453 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 48.15% β-sheet: 18.52% Coil/Unstructured: 33.33% | Feature Viewer |
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Pfam ID | Name | % Frequency in 106 Family Scaffolds |
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PF03118 | RNA_pol_A_CTD | 9.43 |
PF10544 | T5orf172 | 4.72 |
PF04466 | Terminase_3 | 2.83 |
PF13884 | Peptidase_S74 | 0.94 |
PF04404 | ERF | 0.94 |
PF13704 | Glyco_tranf_2_4 | 0.94 |
PF05065 | Phage_capsid | 0.94 |
PF11645 | PDDEXK_5 | 0.94 |
COG ID | Name | Functional Category | % Frequency in 106 Family Scaffolds |
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COG0202 | DNA-directed RNA polymerase, alpha subunit/40 kD subunit | Transcription [K] | 9.43 |
COG1783 | Phage terminase large subunit | Mobilome: prophages, transposons [X] | 2.83 |
COG4653 | Predicted phage phi-C31 gp36 major capsid-like protein | Mobilome: prophages, transposons [X] | 0.94 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 77.36 % |
All Organisms | root | All Organisms | 22.64 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000101|DelMOSum2010_c10079567 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Aequorivita → unclassified Aequorivita → Aequorivita sp. | 1460 | Open in IMG/M |
3300000101|DelMOSum2010_c10105138 | Not Available | 1159 | Open in IMG/M |
3300000116|DelMOSpr2010_c10013226 | Not Available | 4204 | Open in IMG/M |
3300000116|DelMOSpr2010_c10111697 | Not Available | 1005 | Open in IMG/M |
3300004279|Ga0066605_10020079 | Not Available | 3340 | Open in IMG/M |
3300004448|Ga0065861_1054828 | Not Available | 1675 | Open in IMG/M |
3300004457|Ga0066224_1131015 | Not Available | 1876 | Open in IMG/M |
3300004461|Ga0066223_1018606 | Not Available | 868 | Open in IMG/M |
3300006029|Ga0075466_1011950 | Not Available | 2951 | Open in IMG/M |
3300006164|Ga0075441_10009382 | All Organisms → Viruses → Predicted Viral | 4178 | Open in IMG/M |
3300006165|Ga0075443_10115409 | Not Available | 932 | Open in IMG/M |
3300006193|Ga0075445_10012064 | Not Available | 3836 | Open in IMG/M |
3300006193|Ga0075445_10051183 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1640 | Open in IMG/M |
3300006352|Ga0075448_10093917 | Not Available | 943 | Open in IMG/M |
3300006802|Ga0070749_10350166 | Not Available | 821 | Open in IMG/M |
3300006803|Ga0075467_10150849 | Not Available | 1334 | Open in IMG/M |
3300006803|Ga0075467_10309611 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Aequorivita → unclassified Aequorivita → Aequorivita sp. | 839 | Open in IMG/M |
3300006803|Ga0075467_10646477 | Not Available | 539 | Open in IMG/M |
3300006810|Ga0070754_10355776 | Not Available | 647 | Open in IMG/M |
3300006920|Ga0070748_1001128 | All Organisms → cellular organisms → Bacteria | 12539 | Open in IMG/M |
3300006920|Ga0070748_1200722 | Not Available | 728 | Open in IMG/M |
3300006920|Ga0070748_1211805 | Not Available | 705 | Open in IMG/M |
3300006947|Ga0075444_10101641 | Not Available | 1258 | Open in IMG/M |
3300007229|Ga0075468_10140277 | Not Available | 738 | Open in IMG/M |
3300007231|Ga0075469_10143423 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 653 | Open in IMG/M |
3300007540|Ga0099847_1012129 | Not Available | 2842 | Open in IMG/M |
3300007540|Ga0099847_1188799 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 603 | Open in IMG/M |
3300007542|Ga0099846_1056408 | Not Available | 1482 | Open in IMG/M |
3300009071|Ga0115566_10532570 | Not Available | 663 | Open in IMG/M |
3300009076|Ga0115550_1035898 | Not Available | 2152 | Open in IMG/M |
3300009076|Ga0115550_1112765 | Not Available | 990 | Open in IMG/M |
3300009077|Ga0115552_1009480 | Not Available | 5079 | Open in IMG/M |
3300009428|Ga0114915_1011376 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 3380 | Open in IMG/M |
3300009428|Ga0114915_1031422 | Not Available | 1813 | Open in IMG/M |
3300009428|Ga0114915_1049998 | Not Available | 1351 | Open in IMG/M |
3300009428|Ga0114915_1102405 | Not Available | 850 | Open in IMG/M |
3300009440|Ga0115561_1399443 | Not Available | 503 | Open in IMG/M |
3300009443|Ga0115557_1127225 | Not Available | 1049 | Open in IMG/M |
3300009467|Ga0115565_10523321 | Not Available | 532 | Open in IMG/M |
3300009495|Ga0115571_1033223 | Not Available | 2499 | Open in IMG/M |
3300009495|Ga0115571_1058723 | Not Available | 1757 | Open in IMG/M |
3300009495|Ga0115571_1161932 | Not Available | 932 | Open in IMG/M |
3300009495|Ga0115571_1185183 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 858 | Open in IMG/M |
3300009495|Ga0115571_1322024 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 613 | Open in IMG/M |
3300009495|Ga0115571_1424076 | Not Available | 516 | Open in IMG/M |
3300017753|Ga0181407_1034900 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1347 | Open in IMG/M |
3300017781|Ga0181423_1029083 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 2244 | Open in IMG/M |
3300017782|Ga0181380_1049395 | Not Available | 1509 | Open in IMG/M |
3300021375|Ga0213869_10049825 | Not Available | 2185 | Open in IMG/M |
3300021375|Ga0213869_10098084 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 1430 | Open in IMG/M |
3300021375|Ga0213869_10378260 | Not Available | 584 | Open in IMG/M |
3300021378|Ga0213861_10165364 | Not Available | 1239 | Open in IMG/M |
3300021957|Ga0222717_10002328 | All Organisms → cellular organisms → Bacteria | 14775 | Open in IMG/M |
3300021959|Ga0222716_10508904 | Not Available | 675 | Open in IMG/M |
3300022053|Ga0212030_1004946 | Not Available | 1482 | Open in IMG/M |
3300022053|Ga0212030_1037023 | Not Available | 684 | Open in IMG/M |
3300022061|Ga0212023_1006465 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Aequorivita → unclassified Aequorivita → Aequorivita sp. | 1424 | Open in IMG/M |
3300022072|Ga0196889_1020543 | Not Available | 1375 | Open in IMG/M |
3300022072|Ga0196889_1040945 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Aequorivita → unclassified Aequorivita → Aequorivita sp. | 916 | Open in IMG/M |
3300022072|Ga0196889_1107584 | Not Available | 504 | Open in IMG/M |
3300022164|Ga0212022_1007380 | Not Available | 1483 | Open in IMG/M |
3300022164|Ga0212022_1042920 | Not Available | 700 | Open in IMG/M |
3300022169|Ga0196903_1006720 | Not Available | 1482 | Open in IMG/M |
3300022169|Ga0196903_1007547 | Not Available | 1387 | Open in IMG/M |
3300022169|Ga0196903_1013360 | Not Available | 1009 | Open in IMG/M |
(restricted) 3300023210|Ga0233412_10279508 | Not Available | 735 | Open in IMG/M |
3300025276|Ga0208814_1001886 | Not Available | 9406 | Open in IMG/M |
3300025276|Ga0208814_1004451 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp. | 5565 | Open in IMG/M |
3300025276|Ga0208814_1044254 | Not Available | 1333 | Open in IMG/M |
3300025276|Ga0208814_1102915 | Not Available | 714 | Open in IMG/M |
3300025508|Ga0208148_1000212 | All Organisms → cellular organisms → Bacteria | 22551 | Open in IMG/M |
3300025508|Ga0208148_1001710 | Not Available | 8108 | Open in IMG/M |
3300025508|Ga0208148_1059536 | Not Available | 917 | Open in IMG/M |
3300025543|Ga0208303_1028844 | Not Available | 1493 | Open in IMG/M |
3300025543|Ga0208303_1031195 | Not Available | 1417 | Open in IMG/M |
3300025621|Ga0209504_1036041 | Not Available | 1650 | Open in IMG/M |
3300025626|Ga0209716_1029330 | Not Available | 2062 | Open in IMG/M |
3300025626|Ga0209716_1116463 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 736 | Open in IMG/M |
3300025645|Ga0208643_1051672 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Aequorivita → unclassified Aequorivita → Aequorivita sp. | 1258 | Open in IMG/M |
3300025645|Ga0208643_1070994 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1013 | Open in IMG/M |
3300025652|Ga0208134_1090151 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Aequorivita → unclassified Aequorivita → Aequorivita sp. | 868 | Open in IMG/M |
3300025668|Ga0209251_1104505 | Not Available | 803 | Open in IMG/M |
3300025704|Ga0209602_1042144 | Not Available | 1966 | Open in IMG/M |
3300025705|Ga0209374_1047107 | Not Available | 1576 | Open in IMG/M |
3300025809|Ga0209199_1084439 | Not Available | 1369 | Open in IMG/M |
3300025832|Ga0209307_1209559 | Not Available | 562 | Open in IMG/M |
3300025849|Ga0209603_1160883 | Not Available | 901 | Open in IMG/M |
3300025853|Ga0208645_1194908 | Not Available | 723 | Open in IMG/M |
3300025874|Ga0209533_1075079 | Not Available | 1800 | Open in IMG/M |
3300025874|Ga0209533_1374216 | Not Available | 522 | Open in IMG/M |
3300025876|Ga0209223_10073044 | Not Available | 1976 | Open in IMG/M |
3300025876|Ga0209223_10181443 | Not Available | 1047 | Open in IMG/M |
3300025876|Ga0209223_10202039 | Not Available | 970 | Open in IMG/M |
3300025880|Ga0209534_10275898 | Not Available | 788 | Open in IMG/M |
3300027672|Ga0209383_1003954 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 8189 | Open in IMG/M |
3300027672|Ga0209383_1025948 | Not Available | 2433 | Open in IMG/M |
3300027686|Ga0209071_1185849 | Not Available | 583 | Open in IMG/M |
3300027704|Ga0209816_1065293 | Not Available | 1557 | Open in IMG/M |
3300027771|Ga0209279_10158979 | Not Available | 662 | Open in IMG/M |
3300028125|Ga0256368_1037781 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Aequorivita → unclassified Aequorivita → Aequorivita sp. | 860 | Open in IMG/M |
3300031519|Ga0307488_10235501 | Not Available | 1216 | Open in IMG/M |
3300031519|Ga0307488_10807888 | Not Available | 518 | Open in IMG/M |
3300031630|Ga0308004_10029758 | Not Available | 2386 | Open in IMG/M |
3300031658|Ga0307984_1085024 | Not Available | 936 | Open in IMG/M |
3300033742|Ga0314858_157141 | Not Available | 584 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 32.08% |
Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 18.87% |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 12.26% |
Deep Ocean | Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean | 7.55% |
Pelagic Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine | 5.66% |
Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 3.77% |
Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine | 3.77% |
Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 2.83% |
Sea-Ice Brine | Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine | 2.83% |
Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 2.83% |
Sackhole Brine | Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine | 1.89% |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 1.89% |
Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 1.89% |
Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 0.94% |
Marine | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine | 0.94% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000101 | Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010 | Environmental | Open in IMG/M |
3300000116 | Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010 | Environmental | Open in IMG/M |
3300004279 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m | Environmental | Open in IMG/M |
3300004448 | Marine viral communities from Newfoundland, Canada BC-1 | Environmental | Open in IMG/M |
3300004457 | Marine viral communities from Newfoundland, Canada MC-1 | Environmental | Open in IMG/M |
3300004461 | Marine viral communities from Newfoundland, Canada BC-2 | Environmental | Open in IMG/M |
3300006029 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA | Environmental | Open in IMG/M |
3300006164 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA | Environmental | Open in IMG/M |
3300006165 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA | Environmental | Open in IMG/M |
3300006193 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA | Environmental | Open in IMG/M |
3300006352 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA | Environmental | Open in IMG/M |
3300006802 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 | Environmental | Open in IMG/M |
3300006803 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA | Environmental | Open in IMG/M |
3300006810 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 | Environmental | Open in IMG/M |
3300006920 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 | Environmental | Open in IMG/M |
3300006947 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA | Environmental | Open in IMG/M |
3300007229 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA | Environmental | Open in IMG/M |
3300007231 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA | Environmental | Open in IMG/M |
3300007540 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG | Environmental | Open in IMG/M |
3300007542 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG | Environmental | Open in IMG/M |
3300009071 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 | Environmental | Open in IMG/M |
3300009076 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511 | Environmental | Open in IMG/M |
3300009077 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 | Environmental | Open in IMG/M |
3300009428 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 | Environmental | Open in IMG/M |
3300009440 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 | Environmental | Open in IMG/M |
3300009443 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421 | Environmental | Open in IMG/M |
3300009467 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530 | Environmental | Open in IMG/M |
3300009495 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 | Environmental | Open in IMG/M |
3300017753 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26 | Environmental | Open in IMG/M |
3300017781 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14 | Environmental | Open in IMG/M |
3300017782 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19 | Environmental | Open in IMG/M |
3300021375 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132 | Environmental | Open in IMG/M |
3300021378 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131 | Environmental | Open in IMG/M |
3300021957 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D | Environmental | Open in IMG/M |
3300021959 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D | Environmental | Open in IMG/M |
3300022053 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2) | Environmental | Open in IMG/M |
3300022061 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2) | Environmental | Open in IMG/M |
3300022072 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3) | Environmental | Open in IMG/M |
3300022164 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v2) | Environmental | Open in IMG/M |
3300022169 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3) | Environmental | Open in IMG/M |
3300023210 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MG | Environmental | Open in IMG/M |
3300025276 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes) | Environmental | Open in IMG/M |
3300025508 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025543 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
3300025621 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511 (SPAdes) | Environmental | Open in IMG/M |
3300025626 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes) | Environmental | Open in IMG/M |
3300025645 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes) | Environmental | Open in IMG/M |
3300025652 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes) | Environmental | Open in IMG/M |
3300025668 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025704 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes) | Environmental | Open in IMG/M |
3300025705 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m (SPAdes) | Environmental | Open in IMG/M |
3300025809 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes) | Environmental | Open in IMG/M |
3300025832 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530 (SPAdes) | Environmental | Open in IMG/M |
3300025849 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes) | Environmental | Open in IMG/M |
3300025853 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes) | Environmental | Open in IMG/M |
3300025874 | Pelagic Microbial community sample from North Sea - COGITO 998_met_04 (SPAdes) | Environmental | Open in IMG/M |
3300025876 | Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes) | Environmental | Open in IMG/M |
3300025880 | Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes) | Environmental | Open in IMG/M |
3300027672 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes) | Environmental | Open in IMG/M |
3300027686 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA (SPAdes) | Environmental | Open in IMG/M |
3300027704 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes) | Environmental | Open in IMG/M |
3300027771 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes) | Environmental | Open in IMG/M |
3300028125 | Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SB | Environmental | Open in IMG/M |
3300031519 | Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2 | Environmental | Open in IMG/M |
3300031630 | Marine microbial communities from water near the shore, Antarctic Ocean - #38 | Environmental | Open in IMG/M |
3300031658 | Marine microbial communities from Ellis Fjord, Antarctic Ocean - #78 | Environmental | Open in IMG/M |
3300033742 | Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSum2010_100795673 | 3300000101 | Marine | MKKYIIESDTPLLDFTLEYPRISIDVEYAATLSKFALLSYLDEEFMFYHERADR* |
DelMOSum2010_101051382 | 3300000101 | Marine | MKKYIIESDTPLFDFTLEYPRISIDVEYAATLSKFALLSYLDEEFMFYHERADR* |
DelMOSpr2010_100132267 | 3300000116 | Marine | MKKYIIESETPLFDFTLEYPRIHIDMEYAATLSNFELLSYLDEEFMFYHERIDR* |
DelMOSpr2010_101116972 | 3300000116 | Marine | MKKYIIESETPLFDFTLEYPRIYIDMEYAATLSNFELLSYLDEEFMFYHERIDR* |
Ga0066605_100200798 | 3300004279 | Marine | MKKYIIESDTPLLDFTLEYPRINIDMEYAATLSRFALLSYLDDEFMFYHERADR* |
Ga0065861_10548282 | 3300004448 | Marine | MWKLFRKRSGFMKKYIIESNTPLFDFTLEYPRIDIDMEYAATLSRFALLSYLDDEFMFYHERIDR* |
Ga0066224_11310151 | 3300004457 | Marine | MKKYIIESDTPLFDFTLEYPRIDIDMEYAATLSRFALLSYLDEEFMFYHERADR* |
Ga0066223_10186061 | 3300004461 | Marine | MKKYIIESETPLFDFTLEYPRIDIDMEYAATLSRFALLSYLDDEFMFYHERIDR* |
Ga0075466_10119503 | 3300006029 | Aqueous | MWKLLRRGGRFMKKYIIESDTPLLDFTLEYPRIDIDMEYASTLSRFALLSYLDDEFMFYHERADR* |
Ga0075441_100093825 | 3300006164 | Marine | MKKYIIESDTPLFNFTLEYPRIHIDMEYAATLSRFALLSYLDEEFMFYHERIDR* |
Ga0075443_101154093 | 3300006165 | Marine | MWKLFRKRGKFMKKYIIESDTPLFNFTLEYPRIHIDMEYAATLSRFALLSYLDEEFMFYHERIDR* |
Ga0075445_100120641 | 3300006193 | Marine | RLFFLRRHMWKLFRKRGEFMKKYIIESDTPLFDFTLEYPRIHIDMEYAATLSRFALLSYLDEEFMFYHERIDR* |
Ga0075445_100511832 | 3300006193 | Marine | MKKYIIKSDTPLFYFTLEYPRIHIDMEYAATLSNFELLSYLDEEFMFYHERIDR* |
Ga0075448_100939175 | 3300006352 | Marine | PLFDFKLEYPRIHIDMEYAATLSNFELLSYLDEEFMFYHERIDR* |
Ga0070749_103501662 | 3300006802 | Aqueous | MKKYIIESDTPLFDFTMEYPRIHIDMEYAATLSDFELLSYLDEEFMFYHERVDR* |
Ga0075467_101508493 | 3300006803 | Aqueous | MKKYIIESETPLFDFTLEYPRIHIDVEYAATLSNFELLSYLDEEFMFYHERIDR* |
Ga0075467_103096112 | 3300006803 | Aqueous | SDTPLLDFTLEYPRISIDVEYAATLSKFALLSYLDEEFMFYHERADR*VIMLNQ* |
Ga0075467_106464772 | 3300006803 | Aqueous | MKKYIIESDTPLFDFTLEYPRIHIDMEYAATLSKFALLSYLDEEFMFYHERIDR*VTMLNQ* |
Ga0070754_103557762 | 3300006810 | Aqueous | MKKYIIESDTPLLDFTLEYPRIHIDMEYAATLSRFALLSYLDDEFMFYHERADR* |
Ga0070748_100112830 | 3300006920 | Aqueous | MKKYIIESDTPLLDFTLEYPRIHIDMEYASTLSRFALLSYLDDEFMFYHERADR* |
Ga0070748_12007222 | 3300006920 | Aqueous | MKKYIIESNTPLLDFTLEYPRISIDVEYAATLSKFALLSYLDEEFMFYH |
Ga0070748_12118051 | 3300006920 | Aqueous | MKKYIIESDTPLLDFTLEYPRIDIDIKYASTLSRFALLSYLDDEFMFYHERADR* |
Ga0075444_101016413 | 3300006947 | Marine | MKKYILKSDTPIFDFRLEYPRIPIDVLYAATLSRFALLSYLDEEFMFYHERIDR* |
Ga0075468_101402772 | 3300007229 | Aqueous | MKKYIIESDTPLLDFTLEYPRIDIDMEYASTLSRFALLSYLDDEFMFYHERADR* |
Ga0075469_101434231 | 3300007231 | Aqueous | MKKYIIESDTPLFDFTLEYPRIHIDVEYAATLSNFELLSYLDEEFMFYHERI |
Ga0099847_10121292 | 3300007540 | Aqueous | MKKYIIESDTPLFDFTLEYPRIHIDMKYAAKLSKFALLSYLDEEFMFYHERIDR* |
Ga0099847_11887992 | 3300007540 | Aqueous | MKKYIIESDTPLFDFTLEYPRIHIDVEYAATLSNFELLSYLDEEFMFYHERIDR* |
Ga0099846_10564082 | 3300007542 | Aqueous | LLRRGGGFMKKYIIESDTPLFDFTLEYPRIHIDVEYAATLSNFELLSYLDEEFMFYHERIDR* |
Ga0115566_105325701 | 3300009071 | Pelagic Marine | MKKYIIESDTPLFDFTLEYPRIHIDMEYAATLSNFELLSYLDEEFMFYHERIDR* |
Ga0115550_10358984 | 3300009076 | Pelagic Marine | MKKYIIESDTPLLDFTLEYPRISIDVEYAATLSNFELLSYLDEEFMFYHERIDR* |
Ga0115550_11127652 | 3300009076 | Pelagic Marine | MKKYIIESDTPLFDFTLEYPRISIDVEYAATLSKFALLSYLDEEFMFYHERIDR* |
Ga0115552_10094803 | 3300009077 | Pelagic Marine | MKKYIIESDTPLLDFTLEYPRISIDVEYAATLSKFALLSYLDEEFMFYHERIDR* |
Ga0114915_10113767 | 3300009428 | Deep Ocean | MKKYIIESDTPLFDFKLEYPRIHIDMEYAATLSNFELLSYLDEEFMFYHERIDR* |
Ga0114915_10314224 | 3300009428 | Deep Ocean | MKKYIIESDTPLFDFTLEYPRIYIDMKYAATLSRFALLSYLDDEFMFYHERIDR* |
Ga0114915_10499982 | 3300009428 | Deep Ocean | MKKYIIESDTPLFDFTLEYPRIHIDMEYAATLSRFALLSYLDEEFMFYHERIDR* |
Ga0114915_11024052 | 3300009428 | Deep Ocean | MKKYILKSDTPIFDFRLEYPRIPIDVLYASTLSRFALLSYLDEEFMFYHERIDR*I* |
Ga0115561_13994431 | 3300009440 | Pelagic Marine | MKKYIIESDTPLLDFTLEYPRISIDVKYAATLSKFALLSYLDEEFMFYHERIDR* |
Ga0115557_11272255 | 3300009443 | Pelagic Marine | DTPLLDFTLEYPRISIDVEYAATLSNFELLSYLDEEFMFYHERIDR* |
Ga0115565_105233212 | 3300009467 | Pelagic Marine | MKKYIIESDTPLFDFTLEYPRISINVEYAATLSNFELLSYLDEEFMFYHERIDR* |
Ga0115571_10332234 | 3300009495 | Pelagic Marine | MKKYIIESDTPLLDFTLEYPRIDIDMEYAATLSRFALLSYLDDEFMFYHERIDR* |
Ga0115571_10587236 | 3300009495 | Pelagic Marine | MKKYIIESDTPLLDFTLEYPRINIDMEYASTLSRFALLSYLDDEFMFYHERADR* |
Ga0115571_11619323 | 3300009495 | Pelagic Marine | MKKYIIESDTPLLDFTLEYPRIDIDMEYAATLSRFALLSYLDDELMFYHERADR* |
Ga0115571_11851832 | 3300009495 | Pelagic Marine | MKKYIIESDTPLLDFTLEYPRIDINMEYAATLSRFALLSYLDDEFMFYHERADR* |
Ga0115571_13220242 | 3300009495 | Pelagic Marine | MKKYIIESDTPLFDFTLEYPKIDIDMEYAATLSRFALLSYLDDELMFYHERADR* |
Ga0115571_14240762 | 3300009495 | Pelagic Marine | MKKYIIESDTPLFDFTLEYPRISIDVEYAATLSNFELLSYLDEEFMFYHERIDR* |
Ga0181407_10349002 | 3300017753 | Seawater | MKKYIIESDTPLLDFTMEYPRIDIDMEYASTLSRFALLSYLDDEFMFYHERADR |
Ga0181423_10290836 | 3300017781 | Seawater | MKKYIIESDTPLLDFTMEYPRINIDMEYASTLSRFALLSYLDDEFMFYHERADR |
Ga0181380_10493954 | 3300017782 | Seawater | MWKLLRRGGRFMKKYIIESDTPLLDFTLEYPRIDIDMEYAATLSRFALLSYLDDEFMFYHERADR |
Ga0213869_100498253 | 3300021375 | Seawater | MKKYIIESDTPLLDFTLEYPRIDIDMEYASTLSRFALLSYLDDEFMFYHERADR |
Ga0213869_100980842 | 3300021375 | Seawater | MKKYIIESDTPLLDFTLEYPRIDIDMEYAATLSRFALLSYLDDEFMFYHERADR |
Ga0213869_103782603 | 3300021375 | Seawater | SNSVMKKYIIESDTPLLDFTLEYPRIHIDMEYAATLSRFALLSYLDDEFMFYHERADR |
Ga0213861_101653642 | 3300021378 | Seawater | MKKYIIESDTPLLDFTLEYPRIHIDMEYAATLSRFALLSYLDDEFMFYHERADR |
Ga0222717_1000232817 | 3300021957 | Estuarine Water | MKKYIIESDTPLLDFTLEYPRIDIDIKYASTLSRFALLSYLDDEFMFYHERADR |
Ga0222716_105089043 | 3300021959 | Estuarine Water | MWKLLRRGGRFMKKYIIESDTPLLDFTLEYPRIDIDIKYASTLSRFALLSYLDDEFMFYHERADR |
Ga0212030_10049462 | 3300022053 | Aqueous | MKKYIIESETPLFDFTLEYPRIHIDMEYAATLSNFELLSYLDEEFMFYHERIDR |
Ga0212030_10370233 | 3300022053 | Aqueous | MKKYIIKSDTPLLDFTLEYPRISIDVEYAATLSKFALLSYLDEEFMFYHERIDR |
Ga0212023_10064652 | 3300022061 | Aqueous | MKKYIIESDTPLFDFTLEYPRIHIDMEYAATLSNFELLSYLDEEFMFYHERVDR |
Ga0196889_10205432 | 3300022072 | Aqueous | MKKYIIESDTPLFDFTLEYPRIDIDMEYAATLSRFALLSYLDDEFMFYHERIDR |
Ga0196889_10409452 | 3300022072 | Aqueous | MKKYIIESDTPLFDFTLEYPRISIDVEYAATLSKFALLSYLDEEFMFYHERADR |
Ga0196889_11075841 | 3300022072 | Aqueous | MWKLLRRGGRFMKKYIIESDTPLLDFTLEYPRIDIDMEYASTLSRFALLSYLD |
Ga0212022_10073802 | 3300022164 | Aqueous | MKKYIIESDTPLLDFTLEYPRISIDVEYAATLSKFALLSYLDEEFMFYHERIDK |
Ga0212022_10429202 | 3300022164 | Aqueous | MKKYIIESDTPLLDFTLEYPRISIDVEYAATLSKFALLSYLDEEFMFYHERADR |
Ga0196903_10067201 | 3300022169 | Aqueous | MKKYIIESDTPLLDFTLEYPRISIDVEYAATLSKFALLSYLDEEFMF |
Ga0196903_10075471 | 3300022169 | Aqueous | MKKYIIESDTPLFDFTMEYPRIHIDMEYAATLSNFELLSYLDEEFMFYHERVDR |
Ga0196903_10133602 | 3300022169 | Aqueous | MKKYIIGSDTPLLDFTLEYPRISIDVEYAATLSKFALLSYLDEEFMFYHERIDR |
(restricted) Ga0233412_102795082 | 3300023210 | Seawater | MWKLLRRGGRLMKKYIIESDTPLLDFTLEYPRINIDMEYAATLSRFALLSYLDDEFMFYHERADR |
Ga0208814_100188612 | 3300025276 | Deep Ocean | MKKYIIESDTPLFDFTLEYPRIYIDMKYAATLSRFALLSYLDDEFMFYHERIDR |
Ga0208814_100445113 | 3300025276 | Deep Ocean | MKKYIIESDTPLFDFKLEYPRIHIDMEYAATLSNFELLSYLDEEFMFYHERIDR |
Ga0208814_10442543 | 3300025276 | Deep Ocean | MKKYIIESDTPLFDFTLEYPRIHIDMEYAATLSRFALLSYLDEEFMFYHERIDR |
Ga0208814_11029152 | 3300025276 | Deep Ocean | MKKYILKSDTPIFDFRLEYPRIPIDVLYASTLSRFALLSYLDEEFMFYHERIDR |
Ga0208148_10002122 | 3300025508 | Aqueous | MKKYIIESDTPLFDFTMEYPRIHIDMEYAATLSDFELLSYLDEEFMFYHERVDR |
Ga0208148_10017102 | 3300025508 | Aqueous | MKKYIIESDTPLLDFTLEYPRISIDVEYAATLSKFALLSYLDEEFMFYHERIDR |
Ga0208148_10595362 | 3300025508 | Aqueous | MWKLLRRGGRFMKKYIIESDTPLLDFTLEYPRIDIDMEYASTLSRFALLSYLDDEFMFYHERADR |
Ga0208303_10288445 | 3300025543 | Aqueous | MKKYIIESDTPLFDFTLEYPRIHIDMKYAAKLSKFALLSYLDEEFMFYHERIDR |
Ga0208303_10311952 | 3300025543 | Aqueous | MKKYIIESDTPLFDFTLEYPRIHIDVEYAATLSNFELLSYLDEEFMFYHERIDR |
Ga0209504_10360413 | 3300025621 | Pelagic Marine | MKKYIIESDTPLLDFTLEYPRISIDVEYAATLSNFELLSYLDEEFMFYHERIDR |
Ga0209716_10293302 | 3300025626 | Pelagic Marine | MKKYIIESDTPLFDFTLEYPRIDIDMEYAATLSRFALLSYLDDELMFYHERADR |
Ga0209716_11164632 | 3300025626 | Pelagic Marine | MKKYIIESDTPLLDFTLEYPRIDINMEYAATLSRFALLSYLDDEFMFYHERADR |
Ga0208643_10516722 | 3300025645 | Aqueous | MKKYIIESDTPLFDFTLEYPRIHIDMEYAATLSNFELLSYLDEEFMFYHERIDR |
Ga0208643_10709943 | 3300025645 | Aqueous | DTPLFDFTLEYPRIHIDMEYAATLSNFELLSYLDEEFMFYHERIDR |
Ga0208134_10901513 | 3300025652 | Aqueous | ESDTPLLDFTLEYPRISIDVEYAATLSKFALLSYLDEEFMFYHERADR |
Ga0209251_11045053 | 3300025668 | Marine | MWKLLRRGGRFMKKYIIESDTPLLDFTLEYPRINIDMEYAATLSRFALLSYLDDEFMFYHERADR |
Ga0209602_10421444 | 3300025704 | Pelagic Marine | MKKYIIESDTPLLDFTLEYPRIDIDMEYAATLSRFALLSYLDDEFMFYHERIDR |
Ga0209374_10471075 | 3300025705 | Marine | MKKYIIESDTPLLDFTLEYPRINIDMEYASTLSRFALLSYLDDEFMFYHERADR |
Ga0209199_10844395 | 3300025809 | Pelagic Marine | IESDTPLLDFTLEYPRISIDVEYAATLSKFALLSYLDEEFMFYHERIDR |
Ga0209307_12095591 | 3300025832 | Pelagic Marine | MKKYIIESDTPLLDFTLEYPRISIDVEYAATLSKFALLSYLDEEFMFYHERADRXT |
Ga0209603_11608832 | 3300025849 | Pelagic Marine | MKKYIIESDTPLLDFTLEYPRINIDMEYAATLSRFALLSYLDDELMFYHERADR |
Ga0208645_11949081 | 3300025853 | Aqueous | DTPLLDFTLEYPRIDIDMEYASTLSRFALLSYLDDEFMFYHERADR |
Ga0209533_10750794 | 3300025874 | Pelagic Marine | MWKLLRKRSGFMKKYIIESDTPLLDFTLEYPRISIDVEYAATLSNFELLSYLDEEFMFYHERIDR |
Ga0209533_13742163 | 3300025874 | Pelagic Marine | PIDTMKKYIIESDTPLLDFTLEYPRISIDVEYAATLSKFALLSYLDEEFMFYHERIDR |
Ga0209223_100730446 | 3300025876 | Pelagic Marine | MKKYIIESDTPLFDFTLEYPRIHIDVEYAATLSKFALLSYLDEEFMFYHERIDR |
Ga0209223_101814433 | 3300025876 | Pelagic Marine | MKKYIIESDTPLFDFTLEYPRISINVEYAATLSNFELLSYLDEEFMFYHERIDR |
Ga0209223_102020391 | 3300025876 | Pelagic Marine | LLRRGGRLMKKYIIESDTPLLDFTLEYPRISIDVEYAATLSKFALLSYLDEEFMFYHERADR |
Ga0209534_102758982 | 3300025880 | Pelagic Marine | MKKYIIESDTPLLDFTLEYPRISIDVEYAATLSKFALLSYLDEEFM |
Ga0209383_10039544 | 3300027672 | Marine | MKKYIIKSDTPLFYFTLEYPRIHIDMEYAATLSNFELLSYLDEEFMFYHERIDR |
Ga0209383_10259488 | 3300027672 | Marine | MKKYIIESDTPLFDFTLEYPRIYIDMKYAATLSRFALLSYLDEEFMFYHERIDR |
Ga0209071_11858491 | 3300027686 | Marine | PLFDFKLEYPRIHIDMEYAATLSNFELLSYLDEEFMFYHERIDR |
Ga0209816_10652934 | 3300027704 | Marine | MKKYILKSDTPIFDFRLEYPRIPIDVLYAATLSRFALLSYLDEEFMFYHERIDR |
Ga0209279_101589793 | 3300027771 | Marine | MKKYIIESDTPLFNFTLEYPRIHIDMEYAATLSRFALLSYLDEEFMFYHERIDR |
Ga0256368_10377811 | 3300028125 | Sea-Ice Brine | MKKYIIKSDTPLFDFTLEYPRIYIDMEYAATLSNFELLSYLDEEFMFYHERIDR |
Ga0307488_102355014 | 3300031519 | Sackhole Brine | MKKYIIESDTPLFDFTLEYPRISIDVEYASTLSKFALLSYLDEEFMFYHERIDR |
Ga0307488_108078882 | 3300031519 | Sackhole Brine | MKKYIIESETPLFDFTLEYPRIYIDMEYAATLSNFELLSYLDEEFMFYHERIDR |
Ga0308004_100297584 | 3300031630 | Marine | MKKYIIKSDTPLFDFTLEYPRIHIDMEYAATLSRFALLSYLDDEFMFYH |
Ga0307984_10850242 | 3300031658 | Marine | MKKYIIESDTPLFDFTLEYPRINIDMKYAATLSRFALLSYLDEEFMFYHERIDR |
Ga0314858_157141_21_218 | 3300033742 | Sea-Ice Brine | MWKLLRKRSGFMKKYIIESETPLFDFTLEYPRIYIDMEYAATLSNFELLSYLDEEFMFYHERIDR |
Ga0314858_184492_395_535 | 3300033742 | Sea-Ice Brine | MKKYIIESETPLLDFTIEYPRIKINVNHATKLSRLDLLLYLKDEFKF |
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