NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F094397

Metagenome Family F094397

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F094397
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 38 residues
Representative Sequence MKKKKNIPNNFRGKEDKFWSNIVKGLKKFLESPFK
Number of Associated Samples 65
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 61.32 %
% of genes near scaffold ends (potentially truncated) 19.81 %
% of genes from short scaffolds (< 2000 bps) 59.43 %
Associated GOLD sequencing projects 53
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (45.283 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(76.415 % of family members)
Environment Ontology (ENVO) Unclassified
(92.453 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(91.509 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.98%    β-sheet: 0.00%    Coil/Unstructured: 73.02%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF06067DUF932 23.58
PF03796DnaB_C 6.60
PF12705PDDEXK_1 6.60
PF09588YqaJ 5.66
PF02086MethyltransfD12 3.77
PF00589Phage_integrase 2.83
PF05866RusA 1.89
PF14090HTH_39 0.94
PF00535Glycos_transf_2 0.94
PF13539Peptidase_M15_4 0.94
PF00772DnaB 0.94
PF12728HTH_17 0.94
PF09374PG_binding_3 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 7.55
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 6.60
COG0338DNA-adenine methylaseReplication, recombination and repair [L] 3.77
COG3392Adenine-specific DNA methylaseReplication, recombination and repair [L] 3.77
COG4570Holliday junction resolvase RusA (prophage-encoded endonuclease)Replication, recombination and repair [L] 1.89


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms54.72 %
UnclassifiedrootN/A45.28 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001450|JGI24006J15134_10000424Not Available26169Open in IMG/M
3300001450|JGI24006J15134_10001662All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon12610Open in IMG/M
3300001450|JGI24006J15134_10002600Not Available9864Open in IMG/M
3300001450|JGI24006J15134_10104527All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → unclassified Gimesia → Gimesia sp.1010Open in IMG/M
3300001683|GBIDBA_10012017All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon5051Open in IMG/M
3300002231|KVRMV2_100410368All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → unclassified Gimesia → Gimesia sp.763Open in IMG/M
3300003690|PicViral_1000482All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes29855Open in IMG/M
3300006164|Ga0075441_10160009All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon847Open in IMG/M
3300006736|Ga0098033_1006010All Organisms → Viruses → Predicted Viral4120Open in IMG/M
3300006736|Ga0098033_1174780All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon598Open in IMG/M
3300006738|Ga0098035_1008349All Organisms → Viruses → Predicted Viral4332Open in IMG/M
3300006738|Ga0098035_1011224All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → unclassified Gimesia → Gimesia sp.3660Open in IMG/M
3300006738|Ga0098035_1076881Not Available1183Open in IMG/M
3300006738|Ga0098035_1305137Not Available518Open in IMG/M
3300006750|Ga0098058_1004720All Organisms → Viruses → Predicted Viral4185Open in IMG/M
3300006751|Ga0098040_1002323Not Available7798Open in IMG/M
3300006751|Ga0098040_1040285Not Available1472Open in IMG/M
3300006751|Ga0098040_1057526All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon1201Open in IMG/M
3300006752|Ga0098048_1085621All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → unclassified Gimesia → Gimesia sp.961Open in IMG/M
3300006752|Ga0098048_1126755All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon766Open in IMG/M
3300006753|Ga0098039_1027980All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium2009Open in IMG/M
3300006753|Ga0098039_1231098All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon624Open in IMG/M
3300006754|Ga0098044_1093989All Organisms → Viruses → Predicted Viral1233Open in IMG/M
3300006754|Ga0098044_1104083All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Sphingobacterium1161Open in IMG/M
3300006754|Ga0098044_1326491All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → unclassified Gimesia → Gimesia sp.584Open in IMG/M
3300006789|Ga0098054_1006129All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon5210Open in IMG/M
3300006789|Ga0098054_1108644Not Available1036Open in IMG/M
3300006789|Ga0098054_1200933All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium726Open in IMG/M
3300006793|Ga0098055_1202265Not Available754Open in IMG/M
3300006924|Ga0098051_1027784All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon1612Open in IMG/M
3300006925|Ga0098050_1097103All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon754Open in IMG/M
3300006927|Ga0098034_1063032Not Available1082Open in IMG/M
3300006928|Ga0098041_1179145Not Available679Open in IMG/M
3300006928|Ga0098041_1264501All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → unclassified Gimesia → Gimesia sp.548Open in IMG/M
3300006929|Ga0098036_1077237All Organisms → Viruses → Predicted Viral1026Open in IMG/M
3300008050|Ga0098052_1006626All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon6350Open in IMG/M
3300008050|Ga0098052_1009319Not Available5164Open in IMG/M
3300008050|Ga0098052_1023284Not Available2911Open in IMG/M
3300008050|Ga0098052_1147207All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon934Open in IMG/M
3300008051|Ga0098062_1005475All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon3110Open in IMG/M
3300008220|Ga0114910_1005451All Organisms → cellular organisms → Bacteria5131Open in IMG/M
3300009173|Ga0114996_10025300Not Available5816Open in IMG/M
3300009173|Ga0114996_10125466Not Available2143Open in IMG/M
3300009173|Ga0114996_10786282Not Available690Open in IMG/M
3300009173|Ga0114996_10838409Not Available663Open in IMG/M
3300009425|Ga0114997_10055509Not Available2529Open in IMG/M
3300009425|Ga0114997_10521838Not Available631Open in IMG/M
3300009441|Ga0115007_10614258Not Available724Open in IMG/M
3300009595|Ga0105214_115535All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium583Open in IMG/M
3300009622|Ga0105173_1006693All Organisms → Viruses → Predicted Viral1538Open in IMG/M
3300009622|Ga0105173_1087871Not Available561Open in IMG/M
3300010150|Ga0098056_1222402All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon628Open in IMG/M
3300010150|Ga0098056_1259809Not Available575Open in IMG/M
3300010151|Ga0098061_1005965Not Available5545Open in IMG/M
3300010151|Ga0098061_1109609All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon1023Open in IMG/M
3300010153|Ga0098059_1006129Not Available5247Open in IMG/M
3300010155|Ga0098047_10408064Not Available508Open in IMG/M
3300010883|Ga0133547_10199091All Organisms → Viruses → Predicted Viral4270Open in IMG/M
3300010883|Ga0133547_10562186Not Available2289Open in IMG/M
3300020374|Ga0211477_10003524Not Available8750Open in IMG/M
3300020395|Ga0211705_10109659Not Available1002Open in IMG/M
3300020451|Ga0211473_10031171All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon2640Open in IMG/M
3300020470|Ga0211543_10508070Not Available572Open in IMG/M
3300020472|Ga0211579_10008861All Organisms → cellular organisms → Bacteria6875Open in IMG/M
3300020474|Ga0211547_10202538All Organisms → cellular organisms → Bacteria1019Open in IMG/M
3300020477|Ga0211585_10069741All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → unclassified Gimesia → Gimesia sp.2498Open in IMG/M
(restricted) 3300024517|Ga0255049_10291638Not Available749Open in IMG/M
3300025061|Ga0208300_102271All Organisms → cellular organisms → Bacteria5613Open in IMG/M
3300025072|Ga0208920_1005386Not Available3001Open in IMG/M
3300025084|Ga0208298_1067673All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon675Open in IMG/M
3300025096|Ga0208011_1001216Not Available9224Open in IMG/M
3300025096|Ga0208011_1016368Not Available1961Open in IMG/M
3300025096|Ga0208011_1029565Not Available1351Open in IMG/M
3300025096|Ga0208011_1045789Not Available1026Open in IMG/M
3300025103|Ga0208013_1001311Not Available11761Open in IMG/M
3300025103|Ga0208013_1007113All Organisms → Viruses → Predicted Viral3805Open in IMG/M
3300025103|Ga0208013_1030941All Organisms → Viruses → Predicted Viral1528Open in IMG/M
3300025103|Ga0208013_1109909All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.688Open in IMG/M
3300025109|Ga0208553_1006023All Organisms → Viruses → Predicted Viral3588Open in IMG/M
3300025109|Ga0208553_1016823All Organisms → cellular organisms → Bacteria1968Open in IMG/M
3300025109|Ga0208553_1054901All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium978Open in IMG/M
3300025112|Ga0209349_1000599Not Available18137Open in IMG/M
3300025112|Ga0209349_1023997Not Available2114Open in IMG/M
3300025118|Ga0208790_1086006All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Sphingobacterium932Open in IMG/M
3300025118|Ga0208790_1132374All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon702Open in IMG/M
3300025125|Ga0209644_1098543Not Available691Open in IMG/M
3300025132|Ga0209232_1220067Not Available567Open in IMG/M
3300025133|Ga0208299_1007644All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon5770Open in IMG/M
3300025141|Ga0209756_1323911Not Available534Open in IMG/M
3300025151|Ga0209645_1045142All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon1567Open in IMG/M
3300025168|Ga0209337_1000577Not Available29530Open in IMG/M
3300025168|Ga0209337_1005104All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon8990Open in IMG/M
3300025168|Ga0209337_1040058Not Available2515Open in IMG/M
3300025168|Ga0209337_1153634All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → unclassified Gimesia → Gimesia sp.993Open in IMG/M
3300025218|Ga0207882_1028839Not Available801Open in IMG/M
3300025251|Ga0208182_1007792All Organisms → Viruses → Predicted Viral3230Open in IMG/M
3300025259|Ga0207876_1040252All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium633Open in IMG/M
3300026087|Ga0208113_1081584All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300026117|Ga0208317_1009288All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium583Open in IMG/M
3300027779|Ga0209709_10184251Not Available987Open in IMG/M
3300027844|Ga0209501_10021817Not Available5007Open in IMG/M
(restricted) 3300027861|Ga0233415_10000191Not Available31054Open in IMG/M
3300032048|Ga0315329_10569492Not Available602Open in IMG/M
3300033742|Ga0314858_033809All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon1192Open in IMG/M
3300034654|Ga0326741_020149All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium TMED671188Open in IMG/M
3300034654|Ga0326741_070169Not Available582Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine76.42%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine7.55%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean3.77%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic3.77%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.89%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater1.89%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.94%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.94%
Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume0.94%
Marine, Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume0.94%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.94%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001683Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assemblyEnvironmentalOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300003690Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assemblyEnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008051Marine viral communities from Cariaco Basin, Caribbean Sea - 23_WHOI_OMZEnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009441Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M MetagenomeEnvironmentalOpen in IMG/M
3300009595Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300020374Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)EnvironmentalOpen in IMG/M
3300020395Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX555987-ERR599133)EnvironmentalOpen in IMG/M
3300020451Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)EnvironmentalOpen in IMG/M
3300020470Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)EnvironmentalOpen in IMG/M
3300020472Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)EnvironmentalOpen in IMG/M
3300020474Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)EnvironmentalOpen in IMG/M
3300020477Marine microbial communities from Tara Oceans - TARA_B100001123 (ERX555935-ERR599156)EnvironmentalOpen in IMG/M
3300024517 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3EnvironmentalOpen in IMG/M
3300025061Marine viral communities from Cariaco Basin, Caribbean Sea - 23_WHOI_OMZ (SPAdes)EnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025109Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025218Marine viral communities from the Deep Pacific Ocean - MSP-103 (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025259Marine viral communities from the Deep Pacific Ocean - MSP-146 (SPAdes)EnvironmentalOpen in IMG/M
3300026087Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A (SPAdes)EnvironmentalOpen in IMG/M
3300026117Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500 (SPAdes)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027844Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027861 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MGEnvironmentalOpen in IMG/M
3300032048Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315EnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M
3300034654Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24006J15134_10000424273300001450MarineMTKRKKNINNNFRGAEDRFWKKVVNGLKKFLESPFK*
JGI24006J15134_10001662113300001450MarineMAKRGRPRKNKPNNFRGSEDKFWSNVVKGLRKFLESPFK*
JGI24006J15134_10002600233300001450MarineMPKRKNISNNFRGKEDIFWIKVKRGIKRFLEPAFKEK*
JGI24006J15134_1010452753300001450MarineMTKRKKNINNNFRGAEDKFWKKVVNGLKKFLESPFK*
GBIDBA_1001201783300001683Hydrothermal Vent PlumeMKKSKKNIPNNFRGEEDIFWIKIKKGIKKFLEPAFKEK*
KVRMV2_10041036833300002231Marine SedimentMPRKKRANKNIPNNFRGKEDRFWIKIVKGLKKFLESPFK*
PicViral_100048293300003690Marine, Hydrothermal Vent PlumeMKKRKNIDGNFRGWEDIFFIKIKKGLNKFFESPFKRGKK*
Ga0075441_1016000923300006164MarineMAKRGRPRKNKPNNFRGAEDKFWSNIVKGLKKFLESPFK*
Ga0098033_1006010103300006736MarineMKKKTKKNIPNNFRGKEDKFWSSIVKGLKNFLQSPFK*
Ga0098033_117478013300006736MarineNKKKRNVPNNFRGVEDKFWTRIFKGIKNFLQSPFK*
Ga0098035_1008349123300006738MarineMKKKKNIPNNFRGKEDKFWSNIVKGLKKFLESPFK*
Ga0098035_1011224123300006738MarineMPRKKKNIPNNFRGEEDKFWSRIVKGLKKFLESPFK*
Ga0098035_107688133300006738MarineMRRRKRKKNIPNNFRGKEDTFWKKVRDGLKQFLKSPFK*
Ga0098035_130513723300006738MarineMPRKKNISNNFKGKEDIFWIKVKKGIKKFLEPAFKEK*
Ga0098058_100472043300006750MarineMKKKTKKNIPNNFRGKEDKFWSNIVKGLKKFLESPFK*
Ga0098040_1002323193300006751MarineMKKLKKNIAGNFKGKEDIFWIKIKKGIKKFLEPAFKEK*
Ga0098040_104028533300006751MarineMPRRKRKKNIPNNFRGKEDTFWKKVRDGLKQFLKSPFK*
Ga0098040_105752623300006751MarineMPKKRKVRKNIPNNFRGKEDRFWTKVVKGLKSFLESPFK*
Ga0098048_108562153300006752MarineMPKKKKNIPNNFRGKEDIFWIKVVKGFKKFLESPFK*
Ga0098048_112675513300006752MarineKKRGRPRKNIPNNFRGTEDRFWSKIVKGLKKFLESPFK*
Ga0098039_102798023300006753MarineMKKRKNIDGNFRGWEDIFFIKVKKGLKKFLESPFKGGKK*
Ga0098039_123109813300006753MarineKRKGYTNIPNNFRGSEDIFWTKIVKGVRNFLQSPFK*
Ga0098044_109398913300006754MarineMPKKRKTRKNIPNNFRGKEDRFWTKVVKGLKSFLESPFK*
Ga0098044_110408333300006754MarineMKKKKKNIPNNFRGKEDLFWKKIADGLKVFLASPFKDNV*
Ga0098044_132649123300006754MarineMKKKTKKNIPNNFRGKEDKFWSNIVKGLKNFLQSPFK*
Ga0098054_100612933300006789MarineMPTKRKPRKKNIQGNFRGAEDKFWSNVIKGFKKFLKSPFK*
Ga0098054_110864453300006789MarineERLKMPRKKKNIPNNFRGEEDKFWSRIAKGLKKFLESPFK*
Ga0098054_120093323300006789MarineMPKKKKNIDGNFRGKEDLFWKNVVKGFKKFLESPFKK*
Ga0098055_120226533300006793MarineMPTKRKPKKKNIQGNFRGAEDKFWSNVIKGFKKFLES
Ga0098051_102778413300006924MarineKKKTKKNIPNNFRGKEDKFWSNIVKGLKKFLESPFK*
Ga0098050_109710323300006925MarineKKRKVRKNIPNNFRGKEDRFWTKVVKGLKSFLESPFK*
Ga0098034_106303233300006927MarineMRRKKRKKNIPNNFRGKEDTFWKKVRDGLKQFLKSPFK*
Ga0098041_117914533300006928MarineMPKKKKNTPNNFRGKEDIFWIKVVKGFKKFLESPFK*
Ga0098041_126450113300006928MarineMPKKITKKKNIQGNFRGKEDLFFKKIRDVLKKFLESPFK
Ga0098036_107723713300006929MarineKMPKKKKNTPNNFRGKEDIFWIKVVKGFKKFLESPFK*
Ga0098052_1006626133300008050MarineMPKKKNIPHNLRGSEDLFWSKVIKGFKKFLTPAFKRKRQDK*
Ga0098052_100931933300008050MarineMKKLKKNIAGNFKGKEDIFWIKVKKGIKKFLEPAFKEK*
Ga0098052_102328413300008050MarineRKNIPNNFRGKEDIFWIKIKKGIKKFLEPAFKEK*
Ga0098052_114720723300008050MarineMPKKTTKKKNIPNNFRGKEDLFFKKVRDGLKKFLESPFK*
Ga0098062_100547533300008051MarineMPKKRAYKRKNIPNNFRGKEDRFWTKIVKGLKKFLESPFK*
Ga0114910_1005451103300008220Deep OceanMKKRKNINGNFRGWEDIFFIKIKKGLNKFFESPFKRGKK*
Ga0114996_10025300153300009173MarineMKKSKKNIPNNFRGEEDIFWTKIKKGIKKFLKPAFN*
Ga0114996_1012546643300009173MarineMNPKPKAKSKKNIPNNFRGKEDVFWIKIKKGIKIFLEPAFKEK*
Ga0114996_1078628233300009173MarineMKRKKNIPNNFRGKEDKFWIKIKKGIKKFLEPAFKEK*
Ga0114996_1083840923300009173MarineMKKSKKNIPSNFRGEEDIFWIKIKKGIKKFLEPVFKEK*
Ga0114997_1005550953300009425MarineMPRKKNISNNFKGKEDIFWIKVKKGIKKFFEPAFKDK*
Ga0114997_1052183833300009425MarineMNPKPKTKSKKNIPNNFRGKEDIFWIKIKKGIKKFLEPAFREK*
Ga0115007_1061425823300009441MarineMNPKPKTKSKKNIPNNFRGKEDIFWIKIKKGIKTFL*
Ga0105214_11553513300009595Marine OceanicKKRKNIDGNFRGWEDIFFIKIKKGLNKFFESPFKRGKK*
Ga0105173_100669323300009622Marine OceanicMKKRKNIDGNFRGWEDIFFISIKKGLKKFLESPFKRTKK*
Ga0105173_108787113300009622Marine OceanicMPRKKNKPGNFRGKEDLFWKKVRDGLKKFLQSPFK*
Ga0098056_122240213300010150MarineMEMPTKRKPRKKNIQGNFRGAEDKFWSNVIKGFKKFLKSPFK*
Ga0098056_125980913300010150MarineMPKQKRKKNIPNNFRGKEDKFWSNVIKGLKKFLESPFK*
Ga0098061_1005965133300010151MarineMKKKTKSKKNIPNNLRGAEDKFWSNIVKGLKKFLESPFK*
Ga0098061_110960933300010151MarineMPTKRKTKKKNIQGNFRGAEDKFWSNVIKGFKKFLESPFK*
Ga0098059_1006129103300010153MarineMKKRKNIPNNFRGKEDIFWIKIKKGIKKFLEPAFKEK*
Ga0098047_1040806413300010155MarineRLKMPRKKKNIPNNFRGEEDKFWSRIVKGLKKFLESPFK*
Ga0133547_1019909143300010883MarineMKKTKKNIPNNFRGSEDVFWIKIKRGMRKFLKPAFKKEK*
Ga0133547_1056218613300010883MarineMPKTKKIAGNFRGSEDIFWTKVVRGLKKFLESPFKYEVEYEL*
Ga0211477_10003524143300020374MarineMPKKTIKKKNIPNNFRGKEDIFFKKVRDGLKKFLESPFK
Ga0211705_1010965933300020395MarineKTSVRKNIVGNFRGSEDIFFIKVRDGLRKFLESPFK
Ga0211473_1003117113300020451MarineKRTRKRKNIDGNLRGSEDIFWIKVIKGLEKFLESPFR
Ga0211543_1050807013300020470MarineKRKKNIAGNFRGSEDIFWTKVVKGFKKFLEPPKWS
Ga0211579_1000886143300020472MarineMPKKTIKKKNIPNNFRGKEDLFFKKIRDGLKKFLESPFK
Ga0211547_1020253833300020474MarineMPKTKRKNIVGNFRGSEDIFWKKVRDGMKKFLEPAFKG
Ga0211585_1006974123300020477MarineMPKKTTKKKNIPNNFRGKEDLFFKKVRDGLKKFLESPFK
(restricted) Ga0255049_1029163813300024517SeawaterMPRKKKNIPNNFRGEEDKFWSRIVKGLKKFLESPFK
Ga0208300_10227183300025061MarineMPKKRAYKRKNIPNNFRGKEDRFWTKIVKGLKKFLESPFK
Ga0208920_100538633300025072MarineMKKKTKKNIPNNFRGKEDKFWSNIVKGLKKFLESPFK
Ga0208298_106767313300025084MarineKKKTKKNIPNNFRGKEDKFWSNIVKGLKKFLESPFK
Ga0208011_100121693300025096MarineMKKLKKNIAGNFKGKEDIFWIKVKKGIKKFLEPAFKEK
Ga0208011_101636823300025096MarineMPKKRKVRKNIPNNFRGKEDRFWTKVVKGLKSFLESPFK
Ga0208011_102956523300025096MarineMPRKKNISNNFKGKEDIFWIKVKKGIKKFLEPAFKEK
Ga0208011_104578933300025096MarineMPRRKRKKNIPNNFRGKEDTFWKKVRDGLKQFLKSPFK
Ga0208013_1001311143300025103MarineMKKRKNIPNNFRGKEDIFWIKIKKGIKKFLEPAFKEK
Ga0208013_100711393300025103MarineMPTKRKPRKKNIQGNFRGAEDKFWSNVIKGFKKFLKSPFK
Ga0208013_103094123300025103MarineMKKKTKKNIPNNFRGKEDKFWSNIVKGLKNFLQSPFK
Ga0208013_110990913300025103MarineMKKLKKNIAGNFKGKEDIFWIKIKKGIKKFLEPAFKEK
Ga0208553_100602343300025109MarineMKKKTKKNIPNNFRGKEDKFWSSIVKGLKNFLQSPFK
Ga0208553_101682323300025109MarineMRRRKRKKNIPNNFRGKEDTFWKKVRDGLKQFLKSPFK
Ga0208553_105490113300025109MarineMKKRKNIDGNFRGWEDIFFIKVKKGLKKFLESPFKGG
Ga0209349_100059993300025112MarineMKKKKNIPNNFRGKEDKFWSNIVKGLKKFLESPFK
Ga0209349_102399733300025112MarineMKKKTKKNIPNNFRGEEDKFWSNIVKGLKKFLQSPFK
Ga0208790_108600633300025118MarineMKKKKKNIPNNFRGKEDLFWKKIADGLKVFLASPFKDNV
Ga0208790_113237413300025118MarineRRRMKKKTKKNIPNNFRGKEDKFWSNIVKGLKNFLQSPFK
Ga0209644_109854333300025125MarineMPRRKRRKNIPNNFRGKEDTFWKKVRDGLKQFLKSPFK
Ga0209232_122006713300025132MarineKMPTKKTTKKKNIPNNFRGKEDLFFKKVRDGLKKFLESPFKXTRK
Ga0208299_100764443300025133MarineMPKKKNIPHNLRGSEDLFWSKVIKGFKKFLTPAFKRKRQDK
Ga0209756_132391123300025141MarineMPTKRKTKKKNIQGNFRGAEDKFWSNVIKGFKKFLESPFK
Ga0209645_104514223300025151MarineMPTKRKPKKKNIQGNFRGAEDKFWSNVVKGFKKFLESPFK
Ga0209337_1000577153300025168MarineMPKRKNISNNFRGKEDIFWIKVKRGIKRFLEPAFKEK
Ga0209337_100510493300025168MarineMAKRGRPRKNKPNNFRGSEDKFWSNVVKGLRKFLESPFK
Ga0209337_104005833300025168MarineMTKRKKNINNNFRGAEDRFWKKVVNGLKKFLESPFK
Ga0209337_115363413300025168MarineMTKRKKNINNNFRGAEDKFWKKVVNGLKKFLESPFK
Ga0207882_102883923300025218Deep OceanMKKRKNIDGNFRGWEDIFFTSIKKGLKKFLESPFKRTKK
Ga0208182_100779233300025251Deep OceanMKKRKNIDGNFRGWEDIFFIKIKKGLNKFFESPFKRGKK
Ga0207876_104025213300025259Deep OceanMKKRKNIDGNFRGWEDIFFISIKKGLKKFLESPFKRTKK
Ga0208113_108158413300026087MarineRRVGFHTTARKNIPGNFRGAEDIFFIKISAGIKKFLESPFK
Ga0208317_100928813300026117Marine OceanicKKRKNIDGNFRGWEDIFFIKIKKGLNKFFESPFKRGKK
Ga0209709_1018425113300027779MarineMPRKKNISNNFKGKEDIFWIKVKKGIKKFFEPAFKDK
Ga0209501_1002181713300027844MarineMKKSKKNIPNNFRGEEDIFWTKIKKGIKKFLKPAFN
(restricted) Ga0233415_10000191303300027861SeawaterMKKSKKTGFTVNIPNNFRGKEDIFWIKIKKGIKKFLEPAFKEK
Ga0315329_1056949233300032048SeawaterMKKSKKAGFTVKKNIPNNFRGKEDIFWTKIKKGIKKFLEPAFKEK
Ga0314858_033809_308_4333300033742Sea-Ice BrineMKMAKRGRPRKNKPNNFRGSEDKFWSNVVKGLRKFLESPFK
Ga0326741_020149_419_5323300034654Filtered SeawaterMRRKKKTNIPNNFRGKEDIFWKKIKDGLKHFLKSPFK
Ga0326741_070169_49_1593300034654Filtered SeawaterMPRKKKNIPNNFRGEEDKFWSKIVKGLKKFLKSPFK


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