Metagenome / Metatranscriptome Family F094370

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094370
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	81 residues
Representative Sequence	ASVSRVLKPGAPFIFTGAEIEEADDAGITGTMNGVTFHYYAVPSYRALTAEHGLVLVDVQDDPGVATYYLTRKSS
Number of Associated Samples	95
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.77 %
% of genes near scaffold ends (potentially truncated)	86.79 %
% of genes from short scaffolds (< 2000 bps)	92.45 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.887 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (12.264 % of family members)
Environment Ontology (ENVO)	Unclassified (32.075 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.509 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.68% β-sheet: 34.95% Coil/Unstructured: 54.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF13649	Methyltransf_25	3.77
PF13302	Acetyltransf_3	2.83
PF00135	COesterase	1.89
PF14329	DUF4386	1.89
PF13411	MerR_1	0.94
PF00849	PseudoU_synth_2	0.94
PF07596	SBP_bac_10	0.94
PF12867	DinB_2	0.94
PF00884	Sulfatase	0.94
PF05960	DUF885	0.94
PF08241	Methyltransf_11	0.94
PF07995	GSDH	0.94
PF13671	AAA_33	0.94
PF00067	p450	0.94
PF13744	HTH_37	0.94
PF04072	LCM	0.94
PF06445	GyrI-like	0.94
PF13207	AAA_17	0.94
PF01738	DLH	0.94
PF00903	Glyoxalase	0.94
PF00155	Aminotran_1_2	0.94
PF00282	Pyridoxal_deC	0.94
PF05139	Erythro_esteras	0.94
PF03551	PadR	0.94
PF13637	Ank_4	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG2165	Type II secretory pathway, pseudopilin PulG	Cell motility [N]	1.89
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	1.89
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.94
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	0.94
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	0.94
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.94
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.94
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.94
COG2124	Cytochrome P450	Defense mechanisms [V]	0.94
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.94
COG2312	Erythromycin esterase homolog	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.94
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.94
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.94

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
All Organisms	root	All Organisms	48.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
cellular organisms	root	All Organisms → cellular organisms	48.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	13.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.94 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.66 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	5.66 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.72 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.94 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.72 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.83 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.89 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.94 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.94 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.94 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.72 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.94 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.94 %
Acidobacteriia bacterium 12-62-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	0.94 %
Nitriliruptorales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales	0.94 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.72 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	3.77 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	0.94 %
Acidobacteriales bacterium 59-55	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 59-55	0.94 %
Nitriliruptoraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae	0.94 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.94 %
Acidobacteriia bacterium 12-62-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	0.94 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.72 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	3.77 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
unclassified Nitriliruptoraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → unclassified Nitriliruptoraceae	0.94 %
Parcubacteria group bacterium GW2011_GWA1_59_11	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA1_59_11	0.94 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.94 %
Acidobacteriales bacterium 59-55	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 59-55	0.94 %
Acidobacteriia bacterium 12-62-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	0.94 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.72 %
Myxococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	2.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Nitriliruptoraceae bacterium ZYF776	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → unclassified Nitriliruptoraceae → Nitriliruptoraceae bacterium ZYF776	0.94 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.94 %
Corallococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Corallococcus	0.94 %
unclassified Polyangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae	0.94 %
Parcubacteria group bacterium GW2011_GWA1_59_11	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA1_59_11	0.94 %
Acidobacteriales bacterium 59-55	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 59-55	0.94 %
Acidobacteriia bacterium 12-62-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	0.94 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.72 %
Myxococcus hansupus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus hansupus	1.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Polyangiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	0.94 %
Corallococcus coralloides	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Corallococcus → Corallococcus coralloides	0.94 %
Nitriliruptoraceae bacterium ZYF776	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → unclassified Nitriliruptoraceae → Nitriliruptoraceae bacterium ZYF776	0.94 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.94 %
Parcubacteria group bacterium GW2011_GWA1_59_11	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA1_59_11	0.94 %
Acidobacteriales bacterium 59-55	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 59-55	0.94 %
Acidobacteriia bacterium 12-62-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	0.94 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZRSKLJ01DJH1X	Not Available	506	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10692245	Not Available	509	Open in IMG/M
3300000559\|F14TC_100342531	Not Available	909	Open in IMG/M
3300000953\|JGI11615J12901_13455223	Not Available	511	Open in IMG/M
3300002459\|JGI24751J29686_10084336	All Organisms → cellular organisms → Bacteria → Proteobacteria	659	Open in IMG/M
3300004156\|Ga0062589_102538932	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus hansupus	531	Open in IMG/M
3300004157\|Ga0062590_100834027	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300004463\|Ga0063356_102119242	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300004479\|Ga0062595_102450257	Not Available	519	Open in IMG/M
3300004643\|Ga0062591_102146927	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	579	Open in IMG/M
3300005328\|Ga0070676_10808363	Not Available	692	Open in IMG/M
3300005329\|Ga0070683_101811033	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	587	Open in IMG/M
3300005331\|Ga0070670_101052396	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300005332\|Ga0066388_107859839	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300005338\|Ga0068868_102114978	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005340\|Ga0070689_101354331	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Corallococcus → Corallococcus coralloides	642	Open in IMG/M
3300005354\|Ga0070675_101058321	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300005367\|Ga0070667_100091776	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2612	Open in IMG/M
3300005441\|Ga0070700_101308087	Not Available	609	Open in IMG/M
3300005444\|Ga0070694_101108643	Not Available	660	Open in IMG/M
3300005444\|Ga0070694_101731783	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005454\|Ga0066687_10556170	Not Available	681	Open in IMG/M
3300005455\|Ga0070663_101647081	Not Available	573	Open in IMG/M
3300005457\|Ga0070662_100748189	Not Available	829	Open in IMG/M
3300005466\|Ga0070685_10956001	Not Available	640	Open in IMG/M
3300005531\|Ga0070738_10218611	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	856	Open in IMG/M
3300005548\|Ga0070665_101156782	Not Available	785	Open in IMG/M
3300005564\|Ga0070664_101904578	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300005713\|Ga0066905_101239965	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus hansupus	668	Open in IMG/M
3300006032\|Ga0066696_10835125	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300006162\|Ga0075030_100414689	Not Available	1073	Open in IMG/M
3300006169\|Ga0082029_1172933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1635	Open in IMG/M
3300006237\|Ga0097621_101071707	Not Available	756	Open in IMG/M
3300006844\|Ga0075428_102388622	Not Available	543	Open in IMG/M
3300006845\|Ga0075421_100598408	Not Available	1296	Open in IMG/M
3300006852\|Ga0075433_11824806	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA1_59_11	522	Open in IMG/M
3300006880\|Ga0075429_101763409	Not Available	537	Open in IMG/M
3300009156\|Ga0111538_11683143	Not Available	799	Open in IMG/M
3300009545\|Ga0105237_10087764	All Organisms → cellular organisms → Bacteria → Acidobacteria	3100	Open in IMG/M
3300009545\|Ga0105237_11641341	Not Available	650	Open in IMG/M
3300009551\|Ga0105238_11708963	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300009609\|Ga0105347_1515452	Not Available	520	Open in IMG/M
3300009698\|Ga0116216_10239482	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300009792\|Ga0126374_10320568	Not Available	1049	Open in IMG/M
3300010047\|Ga0126382_10549282	All Organisms → cellular organisms → Bacteria → Acidobacteria	940	Open in IMG/M
3300010376\|Ga0126381_100143191	All Organisms → cellular organisms → Bacteria	3127	Open in IMG/M
3300010376\|Ga0126381_101054062	Not Available	1174	Open in IMG/M
3300010376\|Ga0126381_101829419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → unclassified Nitriliruptoraceae → Nitriliruptoraceae bacterium ZYF776	876	Open in IMG/M
3300010376\|Ga0126381_104218052	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300010401\|Ga0134121_12335203	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	574	Open in IMG/M
3300011119\|Ga0105246_11165344	Not Available	707	Open in IMG/M
3300012041\|Ga0137430_1218541	Not Available	545	Open in IMG/M
3300012212\|Ga0150985_115535264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300012989\|Ga0164305_11284358	Not Available	639	Open in IMG/M
3300013105\|Ga0157369_10540262	Not Available	1205	Open in IMG/M
3300013296\|Ga0157374_11975250	Not Available	609	Open in IMG/M
3300013306\|Ga0163162_12288845	Not Available	621	Open in IMG/M
3300013307\|Ga0157372_10886327	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300014164\|Ga0181532_10155952	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300014168\|Ga0181534_10023005	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3136	Open in IMG/M
3300014658\|Ga0181519_10002683	All Organisms → cellular organisms → Bacteria	14941	Open in IMG/M
3300014969\|Ga0157376_10875536	Not Available	915	Open in IMG/M
3300014969\|Ga0157376_10884712	Not Available	910	Open in IMG/M
3300015371\|Ga0132258_12590425	Not Available	1267	Open in IMG/M
3300015372\|Ga0132256_100713253	Not Available	1119	Open in IMG/M
3300015374\|Ga0132255_100246561	All Organisms → cellular organisms → Bacteria → Acidobacteria	2550	Open in IMG/M
3300015374\|Ga0132255_101297562	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300017988\|Ga0181520_10006279	All Organisms → cellular organisms → Bacteria	18294	Open in IMG/M
3300018035\|Ga0187875_10073988	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300018040\|Ga0187862_10335359	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300019361\|Ga0173482_10697989	Not Available	524	Open in IMG/M
3300021560\|Ga0126371_12002916	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300025916\|Ga0207663_10279516	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300025925\|Ga0207650_11814678	Not Available	516	Open in IMG/M
3300025949\|Ga0207667_11415017	Not Available	668	Open in IMG/M
3300026035\|Ga0207703_10818129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	890	Open in IMG/M
3300026075\|Ga0207708_10914908	Not Available	760	Open in IMG/M
3300026325\|Ga0209152_10254146	Not Available	653	Open in IMG/M
3300026550\|Ga0209474_10338201	Not Available	854	Open in IMG/M
3300027462\|Ga0210000_1088384	Not Available	511	Open in IMG/M
3300028592\|Ga0247822_10313166	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	1203	Open in IMG/M
3300028747\|Ga0302219_10160391	Not Available	862	Open in IMG/M
3300028812\|Ga0247825_10124037	Not Available	1759	Open in IMG/M
3300028812\|Ga0247825_10876116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300029883\|Ga0311327_10538057	Not Available	710	Open in IMG/M
3300029910\|Ga0311369_10260835	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300030618\|Ga0311354_10590132	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 59-55	1081	Open in IMG/M
3300030688\|Ga0311345_11209703	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300031524\|Ga0302320_11002866	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300031525\|Ga0302326_11855967	Not Available	786	Open in IMG/M
3300031538\|Ga0310888_10075536	Not Available	1653	Open in IMG/M
3300031562\|Ga0310886_10579578	Not Available	686	Open in IMG/M
3300031716\|Ga0310813_11862975	Not Available	566	Open in IMG/M
3300031744\|Ga0306918_11340433	Not Available	550	Open in IMG/M
3300031901\|Ga0307406_10710261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300031901\|Ga0307406_12103179	Not Available	506	Open in IMG/M
3300031938\|Ga0308175_101310037	Not Available	807	Open in IMG/M
3300031944\|Ga0310884_10548845	Not Available	684	Open in IMG/M
3300032017\|Ga0310899_10518510	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300032122\|Ga0310895_10590741	Not Available	568	Open in IMG/M
3300032122\|Ga0310895_10596303	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300032126\|Ga0307415_102061241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300032805\|Ga0335078_10044604	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	6571	Open in IMG/M
3300033551\|Ga0247830_11012504	Not Available	663	Open in IMG/M
3300033551\|Ga0247830_11395364	Not Available	560	Open in IMG/M
3300034668\|Ga0314793_008469	Not Available	1390	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.21%
Host-Associated	Host-Associated	36.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.72%
Plants	Host-Associated → Plants	36.79%
Aquatic	Environmental → Aquatic	8.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.38%
Peat	Environmental → Terrestrial → Peat	6.60%
Freshwater	Environmental → Aquatic → Freshwater	5.66%
Sediment	Environmental → Aquatic → Sediment	2.83%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.04%
Loam	Environmental → Terrestrial → Soil → Loam	10.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.15%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	12.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.66%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	12.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.77%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.83%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.89%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.94%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002459	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027462	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_08069860	2170459024	Grass Soil	VFASVSRVLKPGAPFLFTAAERDGLDGADDPGITGEMNGVTFRYYAVSSYRALAAEHGLELVGIHDDPGREHVLSHPQVGVNRVN
ICChiseqgaiiFebDRAFT_106922451	3300000363	Soil	MFHLPRDDQGTVLASVSRVLKPAAPFLFTGAEIDGASDDGITGTMNGVTFHYYAVPSYRTLLAEHGFILVDVRDDPGVSTYFLAHKSR*
F14TC_1003425311	3300000559	Soil	VLKPGASFLFTAAEIDGADDAGITGTMNGVTFHYYAVPSYRRLVGEHGFVLVDVHDDPGVSTYYFARRRLDS*
JGI11615J12901_134552231	3300000953	Soil	RRVDQAAAFASVSRVLKPGAPFLFTAAEIDDVDDAGITGTMNGVTFPYYAVPSYRTLIVEFGFVLVDVHDDPGVSTSYLARKSP*
JGI24751J29686_100843361	3300002459	Corn, Switchgrass And Miscanthus Rhizosphere	LANVSRVLKPGAPFLFTAAEIKDADEDGITGTMNGVTFRYYAVPDYASLLGEHGFVLVEVHDDPGVSTYFLARTLV*
Ga0062589_1025389321	3300004156	Soil	SWGMMFHLPRREQAAVFASVSRVLKLGAPFLFTAAEIVGADEGGITGTMNGVTFHYYAVPSYQELVAEHGFVLVDIQDDPGVSTYFLARKSRCAEDE*
Ga0062590_1008340272	3300004157	Soil	PRDQAAAFAAVSRVLKPGAPFLFTAAEIPDVPPDDQGITGTMNGVTFRYYAVADYRTLIGEHGFELENVDDDPGVSTYYFSRKRAAAES*
Ga0063356_1021192421	3300004463	Arabidopsis Thaliana Rhizosphere	VSRVLKLGAPFLFTAAEIVGADEGGITGTMNGVTFHYYAVPSYQELVAEHGFVLVDIQDDPGVSTYFLARKSR*
Ga0062595_1024502572	3300004479	Soil	ASVSRVIKPGAPFLFTGQRSKKLTMPASQGDERCTFHYYAVPSYRALTAEHGLVLVDVQDDPGVATYYLTRKSS*
Ga0062591_1021469271	3300004643	Soil	LKPGSPFLFTAAEIDGADDAGITGTMNGVTFHYYAVPSYQTLIAEHGFVLVNVHDDPGVSTYFLARKAL*
Ga0070676_108083631	3300005328	Miscanthus Rhizosphere	RTCPFVDGVFDAAVSRVLKPGAPFLFTAAEIPDVPPDDLGITGTMNGVTFRYYAVADYRTLIGEHGFELENVYDDPGVSTYYFSRKRGR*
Ga0070683_1018110331	3300005329	Corn Rhizosphere	VFAGVSRVLKPDAPFLFTGAEIDGVDHDDAGITGTMNGVTFRYYAVPNYEKLIRSHGLALVDVHDDPGVSTYYLARKSTPANS*
Ga0070670_1010523962	3300005331	Switchgrass Rhizosphere	GEQSVALASVSRVLKPGAPFIFTGAEIEEADDAGITGTMNGVTFHYYAVPSYRALTAEHGLVLVDVQDDPGVATYYLTRKSS*
Ga0066388_1078598392	3300005332	Tropical Forest Soil	PFLFTAAEIESADNSGITGAMNGVTFRYYAVASYRTLIIEHDLVLVDVHDDPGISTYYLARKGSASCA*
Ga0068868_1021149782	3300005338	Miscanthus Rhizosphere	FTGTEIDGVDEDDAGITGTMNDVTFRYYAVPDYRRLIGAHGLELVDVHDDPGVSTYYLARKLPSR*
Ga0070689_1013543311	3300005340	Switchgrass Rhizosphere	VSWGMMFHLSRTDQSAAFARVSRVLKPGAPFLFTAAEIDDADDAGITGTMNGVTFHYYAVPNYRKLVAEHGFELVDVHDDPGVSTYFLARRS*
Ga0070675_1010583212	3300005354	Miscanthus Rhizosphere	SRLLKPGAPFLFTAAEIEGAAEEGITGTMNGVTFHYYAVPSYRTLIGEHGFELVNVYDDPGVSTYFLIRKTF*
Ga0070667_1000917761	3300005367	Switchgrass Rhizosphere	PRDQAAVFAAVSRVLTPGAPFLFTAAEIPDVPPDDLGITGTMNGVTFRYYAVADYRTLIGEHGFELENVYDDPGVSTYYFSRKRGR*
Ga0070700_1013080871	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	TTFAAVSRVLKPGAPFLFTAAEIPEVPADDPGITGTMNGVTFRYYAVKDYRTLIAKHGFALENVYDDPGVSTYYFARKAG*
Ga0070694_1011086432	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	RVLKPGAPFLFTAAEIPEVPADDPGITGTMNGVTFRYYAVKDYRTLIAKHGFALENVYDDPGVSTYYFARKAG*
Ga0070694_1017317831	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	FHLEPRDQAAAFAAVSRVMKPGAPFLFTAAEIPDVPPDDLGITGTMNGVTFRYYAVADYRTLIGEHGFELENVYDDPGVSTYYFSRKRAAAES*
Ga0066687_105561701	3300005454	Soil	AFANVSRVLKPGAPFLFTAAEIEGADESGITGTMNGVTFHYYAVASYRTMLAAHGMVLADVHDEPGVSTYYLARKQQ*
Ga0070663_1016470812	3300005455	Corn Rhizosphere	RDQAAVFAAVSRVLTPGAPFMFTAAEIPDVPPDDLGITGTMNGVTFRYYAVADYRTLIGEHGFELENVYDDPGVSTYYFSRKRSAAES*
Ga0070662_1007481892	3300005457	Corn Rhizosphere	FAAVSRVLKTGAPFLFTAAEIPEVPADDPGITGTMNGVTFRYYAVKDYRTLIAKHGFALENVYDDPGVSTYYFARKAG*
Ga0070685_109560012	3300005466	Switchgrass Rhizosphere	APFLFTAADIPDVPPDDLGITGTMNGVTFRYYAVADYRTLIGEHGFELENVYDDPGVSTYYFSRKRGR*
Ga0070738_102186111	3300005531	Surface Soil	SVSRVLKPGGAFLFTGVETAESDDPGTTGTMNDVAFHYHAVPSYRSLTAEHGLMLLNIQDEPGVATYYLARKPL*
Ga0070665_1011567822	3300005548	Switchgrass Rhizosphere	MALASVSRVLRPGAPFLFTGAEIEEADDAGITGTMNGVTFHYYAIPSYRALTAEHGLVLVDVQDDPGVATYYLTRKSS*
Ga0070664_1019045782	3300005564	Corn Rhizosphere	FHLEPRDQARTFAAVSRVLKPGAPFLFTAAEIAEVPADDPGITGTMNGVTFRYFAVKDYRTLIAEHDFALERVYDDPGVSTYYYARKRS*
Ga0066905_1012399651	3300005713	Tropical Forest Soil	MFHLPHDDQAVAFASVSSVLKPGAPFLFTAPEIDGVDDAGITGTMNGVTFHCYGVPSYRALVAEHGLVLIDVHDDPGVSTYYLARKSQ*
Ga0066696_108351251	3300006032	Soil	VSRVLKPGASFLFTAAEIDGADDAGITGTMNGVTFHYYAVPSYRRLVAEHGFVLVDVHDNPGVSTYYLARRSW*
Ga0075030_1004146893	3300006162	Watersheds	SVALASVSRVLKPGAPFLFTGAEIDEADDAGITGTMNGVTFHYYAVPSYRALTAEQGLVVVDVQDDPGVATYYLARKSS*
Ga0082029_11729331	3300006169	Termite Nest	STAFASVSRVLKPDAPFLFTGAEIDGASDDGITGTMNGVTFHYYAVPSYRTLLAEHGFTLVDVYDDPGVSTYYLAHKSR*
Ga0097621_1010717072	3300006237	Miscanthus Rhizosphere	LFTGAEIEEADDAGITGTMNGVTFHYYAVPSYRALTAEHGLVLVDVQDDPGVATYYLTRKSS*
Ga0075428_1023886222	3300006844	Populus Rhizosphere	DQTAAFASVSRVLKPGASFLFTAAEIDDADDAGITGTMNGVTFHYYAVSSYRTLLAQHGFVLVDVHDDPGVSTYYLARRSS*
Ga0075421_1005984082	3300006845	Populus Rhizosphere	MPWGMMFHLARRDQTAAFGSMSRVLKAGASFLFTAAEIDGADDAGITGTMNGVTFPYYAVSSYRALVAEHGLVLVDVHDDPGVSTYFLARRS*
Ga0075433_118248061	3300006852	Populus Rhizosphere	ISWGMMFHLTAEDQSTAIGSLSRILKPGAPFLFTAAETANVPDPDRAGTGTMNGVTFYYYAVDSYRTLMAPHGLELVDVYDDPGVSTYYLARKER*
Ga0075429_1017634091	3300006880	Populus Rhizosphere	LEPRDQAAAFAAVSRVLTPGAPFLFTAAEIPDVRPDDLGITGTMNGVTFRYYAVADYRTLIGEHGFELENVYDDPGVTTYYFSRKRAAAES*
Ga0111538_116831432	3300009156	Populus Rhizosphere	QATTFAAVSRVLKPGAPFLFTAAEIPEVPANDPGITGMMNGVTFRYYAVKDYRTLIAKHGFALENVYDDPGVSTYYFARKAG*
Ga0105237_100877641	3300009545	Corn Rhizosphere	APFLFTGAEIEEADDAGITGTMNGVTFHYYAVPSYRALMAEHGLVLVDVQDDPGVATYYFASKSS*
Ga0105237_116413412	3300009545	Corn Rhizosphere	MFHLPWRDQDAVFAGVSRVLKPDAPFLFTGAEIDGVGNDDAGITGTMNGVTFRYYAVPNYEKLIRSHGLSLVDVHDDPGVSTYFLARKSTPTCAP*
Ga0105238_117089631	3300009551	Corn Rhizosphere	QAAALASLSRVLKPGAPFLFTAAEIEGAADSGITGTMNGVTFHYYAVESYRPLLIEHGLTLVDVHDDPGVNTYYLAVRARS*
Ga0105347_15154522	3300009609	Soil	FHLEPRDQAAAFAAVSRVLKPGAPFLFTAAEIPEVRPDDQGITGTMNGVTFRYYAVADYRTLIGEHGFELENVYDDPGVSTYYFSRKRTAAES*
Ga0116216_102394821	3300009698	Peatlands Soil	VSRALKPSAPFLFTATEIDGVDNTGVTGTMNGVTFHYYAVPSYQNLIDEHGLVLVNIYDDPGVSTYYLTRKSP*
Ga0126374_103205681	3300009792	Tropical Forest Soil	RRVDQAAAFASVSRVLKPGAQFLFTAAEIDDADDAGIAGTMNGVTFPYYAIPSYRTMIVEYGLVLVDVHDDPGVSTSYLARKSP*
Ga0126382_105492821	3300010047	Tropical Forest Soil	QAVAFASVSSVLKPGAPFLFTAPEIDGVDDAGITGTMNGVTFHCYGVPSYRALVAEHGLVLIDVHDDPGVSTYYLARKSQ*
Ga0126381_1001431911	3300010376	Tropical Forest Soil	MLFHLRRVDQAAAFASVSRVLKPGAPFLFTAAEIDDADDAGITGTMNGVTFPYYAIPSYRTMIVEYGLVLVDVHDDPGVSTSYLARK
Ga0126381_1010540621	3300010376	Tropical Forest Soil	AFASVSRVLKPGAQFLFTAAEIDDADDAGITGTMNGVTFPYYAIPSYRTMIVEYGLVLVDVHDDPGVSTSYLARKSP*
Ga0126381_1018294191	3300010376	Tropical Forest Soil	AAMLANVSRVLRPGSPFLFTAAEIESADDNGITGTMNGVTFYYYAVASYRTLIADHGLVLVDIHDDPGVGTYYLARKMQ*
Ga0126381_1042180522	3300010376	Tropical Forest Soil	FDAAVSWGMMFHLTRPDQALTLANVSRVLKPGAPFLFTAAEVEDADEGGITGTMNNVTFRYNAVPSYRTLALEHGLVLVNVYDDPGVSTYYLTRKSGE*
Ga0134121_123352031	3300010401	Terrestrial Soil	FASVSRVLKPGAPFLFTAAEIESADDSGITGTMNGVPFRYYAVASYRTLIIEQDLVLVDVHDDPGVSTYYLARKRQ*
Ga0105246_111653442	3300011119	Miscanthus Rhizosphere	ASVSRVLKPGAPFIFTGAEIEEADDAGITGTMNGVTFHYYAVPSYRALTAEHGLVLVDVQDDPGVATYYLTRKSS*
Ga0137430_12185412	3300012041	Soil	VSRVLKPGAPFLFTAAEIPEVRPDDQGITGTMNGVTFRYYAVADYRTLIGEHGFELENVYDDPGVSTYYFSRKRAAAES*
Ga0150985_1155352642	3300012212	Avena Fatua Rhizosphere	DQAKVFAGVSRVLKPGAPFLFTGAERAEFDAAGITGTMNGVTFHYYAVASYRALISKYGFEVVDVYEDAGGSTYYAAQKTG*
Ga0164305_112843582	3300012989	Soil	VALASVSRVLKPGAPFLFTGAEIEEADDAGITGTMNGMTFHYYAVPSYRALTAEHGLVLVDVQDDPGVATYYLTRKSS*
Ga0157369_105402621	3300013105	Corn Rhizosphere	MFHLPRRDQDAVFAGVSRLLKPDAPFLFTGAEIDGVDHDDAGIMGTMNGVTFRYYAVPNYEKLIRSHGFSLIEVHDDPGVSTYFLARKSTPTCAP*
Ga0157374_119752501	3300013296	Miscanthus Rhizosphere	DQAAAFSAVSRLLKPGAPFLFTAAEIPDVPPDDLGITGTMNGVTFRYYAVADYRTLIGEHGFELENVYDDPGVSTYYFSRKRAAAES*
Ga0163162_122888452	3300013306	Switchgrass Rhizosphere	AVSRVLKPGAPFLFTAAEIPDVPPDDLGITGTMNGVTFRYYAVADYRTLIGEHGFELENVHDDPGVSTYYFSRKRAAAES*
Ga0157372_108863273	3300013307	Corn Rhizosphere	VSRVLKPGAPFLFTGAEIEDADDAGITGTMNGVTFHYYAVPSYRMLAAEHGMELVNVQDDPGVATYDLSRKSS*
Ga0181532_101559521	3300014164	Bog	RALKPSAPFLFTATEIDGADNTGVTGTMNGVTFHYYAVPSYQSLIDEHGLVLVNIYDDPCVSTYYLTRKAP*
Ga0181534_100230053	3300014168	Bog	MIFHLSAADQAAVFASVSRALKPSAPFLFTATEIDGADNTGVTGTMNGVTFHYYAVPSYQSLIDEHGLVLVNIYDDPCVSTYYLTRKVP*
Ga0181519_1000268317	3300014658	Bog	QAAVFASVSRALKPSAPFLFTATEIAGADNTGVTGTMNGVTFHYYAVPSYQSLIDEHGLVLVNSYDDPGVSTYYLTRKGP*
Ga0157376_108755362	3300014969	Miscanthus Rhizosphere	MGMMFHLSRGEQSVALASVSRVLKPGAPFLFTGAEIEEADDAGITGTMNGVTFHYYAVPSYRALTAEHGLVLVDVQDDPGVATYYLTRKSF*
Ga0157376_108847122	3300014969	Miscanthus Rhizosphere	RVLKPGAPFLFTGAEIEEADDAGITGTMNGVTFHYYAVPSYRALTAEHGLVLVDVQDDPGVATYYLTRKSS*
Ga0132258_125904251	3300015371	Arabidopsis Rhizosphere	PFLFTGAEIEDAGDAGITGTMNGVTFRYYAGSDESHRTLLQEHGFALLNIHTDSGDNTYYLARKTTNAVC*
Ga0132256_1007132532	3300015372	Arabidopsis Rhizosphere	AISMGMMFHLSPGDQAVAFASVSRVLKPGAPFLFTGAEIEEADDAGITGTMNGVTFHYYAVPSYRALTAEHGLVLVDVQDDPGVATYYLTRKSS*
Ga0132255_1002465613	3300015374	Arabidopsis Rhizosphere	GALFLFTGAETEEADDAGITGTMNGVTFHYYAVSSYRALTAEHGLVLVDIQDDPGVATYYLTRKSS*
Ga0132255_1012975623	3300015374	Arabidopsis Rhizosphere	LKPGAPFLFTAAEREGDDAAGITGEMNGVTFHYYTVPSYRALAAEHGLELVSVYDDPGVSTYYLMRKLP*
Ga0181520_100062794	3300017988	Bog	MIFHLSAADQAAVFASVSRALKPSAPFLFTATEIAGADNTGVTGTMNGVTFHYYAVPSYQSLIDEHGLVLVNSYDDPGVSTYYLTRKGP
Ga0187875_100739884	3300018035	Peatland	PADQAAVFASVSRALKPSAPFLFTATEIDGVDKTGVTGTMNGVTFHYYAVPSYQNLIDEHGLVLVNIYDDPGVSTYYLTRKSP
Ga0187862_103353592	3300018040	Peatland	SAPFLFTATEIDGADNTGVTGTMNGVTFHYYAVPSYQSLIDEHGLVLVNIYDDPCVSTYYLTRKVP
Ga0173482_106979892	3300019361	Soil	FAAVSRVLKPGAPFLFTAAEIPDVPPDDQGITGTMNGVTFRYYAVADYRTLIGEHGFELENVDDDPGVSTYYFSRKRAAAES
Ga0126371_120029162	3300021560	Tropical Forest Soil	RRGVSWGMMFHLSPVDQAAAFASVSRVLNSGAPFLFTAAEIQGAGPGGITGTMNGVTFHYYAVHSYEKLMAEYGLALIDVHDDTGVSTYYLAHKSLP
Ga0207663_102795163	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	QAAALASLSRVLKPGAPFLFTAAEIEGAADSGITGTMNGVTFHYYAVESYRPLLIEHGLMLVDVHDDPGVSTYYLAVRARS
Ga0207650_118146781	3300025925	Switchgrass Rhizosphere	TPSNQAKAFTSMARVLKRGAPFLFTAAEILDVGENDAGITGTMNGVTFHYYAIPDYRTFIERYGFELVDVVDDQGVSTYYFARRI
Ga0207667_114150171	3300025949	Corn Rhizosphere	SRSPKGFAPNPSFWMFHLPRRDQDAVFAGVSRVLKPDAPFLFTGAEIDGVDHDDAGIMGTMNGVTFRYYAVPNYEKLIRSHGFSLIEVHDDPGVSTYFLARKSTPTCAP
Ga0207703_108181291	3300026035	Switchgrass Rhizosphere	ARTFAAVSRVLKPGAPFLFTAAEIAEVPADDPGITGTMNGVTFRYFAVKDYRTLIAEHDFALERVYDDPGVSTYYYARKRS
Ga0207708_109149081	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	AAFSSVSRLLKPGAPFLFTAAELPDVPPDDLGITGTMNGVTFRYYAVADYRTLIGEHGFELENVYDDPGVSTYYFSRKRGR
Ga0209152_102541461	3300026325	Soil	QDTAFANVSRVLKPGAPFLFTAAEIEGADESGITGTMNGVTFHYYAVPGYRTLLAAHGMVLVDVHDEPGVSTYYLARKGPSLLH
Ga0209474_103382012	3300026550	Soil	GMMFHLPRGDQAAAFASVSRVLKPGASFLFTAAEIDGADDAGITGTMNGVTFHYYAVPSYRRLVAEHGFVLVDVHDNPGVSTYYLARRSW
Ga0210000_10883841	3300027462	Arabidopsis Thaliana Rhizosphere	DQAAAFAAVSRVLKPGAPFLFTAAEIPDVRPDDLGITGTMNGVTFRYYAVADYRSLIGEHGFELENVYDDPGVSTYYFSRKRAAAES
Ga0247822_103131662	3300028592	Soil	APFLFTAAEIEGADDAGITGTMNGVTFHYYAVPSYRTLVAEHGFVLVDVHDDPGVSTYYLARKSR
Ga0302219_101603911	3300028747	Palsa	SAPFLFTAAEIAGVDNTGVTGTMNGVTFRYYAVPSYRNLIDEHGLILVNIHDDPGVSTYYFTRKSP
Ga0247825_101240373	3300028812	Soil	RTCPFVDGVFDAAVSRVLKPGAPFLFTAAEIPEVRPDDLGITGTMNGVTFRYYAVPDYRALIGEHGFELENVYDDPGVSTYYFSRKRAVAES
Ga0247825_108761161	3300028812	Soil	DQAAAFASVSRLLKPGATFLFTATEIVGVDDAGITGTMNGVTFHYYAVPSYGQLVAEHGFVLVDVHDDPGVSTYYLARRSW
Ga0311327_105380571	3300029883	Bog	APFLFTGAEIEGVGDTAVRGTMNGVTFHYYAVPSYRNLIEAHGLLLENTYDDPGVSTYYLTRKSACRA
Ga0311369_102608352	3300029910	Palsa	RALKPSAPFLFTAAEIAGVDNTGVTGTMNGVTFRYYAVPSYRNLIDEHGLILVNIHDDPGVSTYYFTRKSP
Ga0311354_105901322	3300030618	Palsa	IFHLPPADQAAVFASVSRALKPSAPFLFTAAEIAGVDNTGVTGTMNGVTFRYYAVPSYRNLIDEHGLILVNIHDDPGVSTYYFTRKSP
Ga0311345_112097032	3300030688	Bog	VSRALKPGAPFLFTGTEIEGVGDTGVTGTMSGVTFHYYAVPRYQNLIDAHGLVLENIHDDPGVSTYYLTRKSCANLTA
Ga0302320_110028661	3300031524	Bog	DARRLPFAEGSLDAAVSWGMIFHLPPTGQAAVFASVSRALKTGAPFLFTGTEIEGVGDTGVTGTMSGVTFHYYAVPRYQDLIDAHGLVLENIHEDPGVSTYYLTRKSS
Ga0302326_118559671	3300031525	Palsa	LKPGAPFLFTATEIDGVGNTGATGTMNGVTFHYYAVPRYQNLMDAHGFVLEKVHDDPGVSTYYFTRKSP
Ga0310888_100755361	3300031538	Soil	MKPGAPFLFTAAEIPEVRPDDLGITGTMNGVTFRYYAVADYRTLIGEHGFELENVYDDPGVSTYYFSRKRAAAES
Ga0310886_105795781	3300031562	Soil	VSRVMKPGAPFLFTAAEIPEVRPDDLGITGTMNGVTFRYYAVADYRTLIGEHGFELENVYDDPGVSTYYFSRKRAAAES
Ga0310813_118629752	3300031716	Soil	MRLIAAGPWVWRKRSLKPGAQFLFTAAEIDDADDAGITGTMNGVTFPYYAVPSYRALIVEYGLVLVDVHDDPGVSTSYLARKSPKAGL
Ga0306918_113404331	3300031744	Soil	SWGMLFHLRRVDQAAAFASVSRVLKPGASFLFTAAEIDDADDAGITGTMNGVTFPYYAVPSYRTLIVEYGLVLVDVHDDPGVSTSYLARKSP
Ga0307406_107102611	3300031901	Rhizosphere	VLKPGAPFLFTGAEIDGASDDGITGTMNGVTFHYYAVPSYRTLLAEHGFTLVDVHDDPGVSTYFLAHKLR
Ga0307406_121031792	3300031901	Rhizosphere	IFHLPRGDQAAAFESVSRVLKPGASFLFTAAEIDGADDAGITGTMNGVTFRYYAVPSYRSLLAEHGFVLVDVHDDPGVSTYFLARRSG
Ga0308175_1013100371	3300031938	Soil	FASVSRVLKPGATFLFTAAEIYDADDAGITGTMNGVTFPYYAIPSYRTLIAEYGLVLFEVHDDPGVSTSYLARKSP
Ga0310884_105488452	3300031944	Soil	FAAVSRVLKPGAPFLFTAAEIPDVRPDDLGITGTMNGVTFRYYAVADYRTLIGEHGFELENVYDDPGVSTYYFSRKRAAAES
Ga0310899_105185101	3300032017	Soil	GMLFHLTPSDQATAFASVSRVLKGGAPFLFTAAEIRDVGDNDPGITGTMNGVTFHYYAIPDYRTFIDQYGFELVDVVDDPGVSTYYFARRKG
Ga0310895_105907411	3300032122	Soil	AAAFATVSRVLKPGAPFLFTAAEIPEVRPDDLGITGTMNGVTFRYYAVADYRTLIGEHGFELENVYDDPGVSTYYFSRKRAAAES
Ga0310895_105963032	3300032122	Soil	FTAAEIRDVGDNDPGITGTMNGVTFHYYAIPDYRTFIDQYGFELVDVVDDPGVSTYYFARRKG
Ga0307415_1020612411	3300032126	Rhizosphere	LPRGDQAAAFESVSRVLKPGASFLFTAAEIDGADDAGITGTMNGVTFRYYAVPSYRSLLAEHGFVLVDVHDDPGVSTYFLARRSG
Ga0335078_100446048	3300032805	Soil	MIFHLSAADQAAVFAGVSRALKPSAPFLFTATEIDGADNTAVTGTMNGVTFHYYAVPSYQSLIDEHGLVLVNIYDDPGVSTYYLTRKAP
Ga0247830_110125041	3300033551	Soil	RRDQPAAFESVSRVLKPGASFLFTAAEIDGADDAGITGTMNGVTFRYYAVPSYRELVAEHGFVLVDVHDDPGVSTYFLARRLW
Ga0247830_113953641	3300033551	Soil	FESVSRVLKPGASFLFTAAEIDGADDAGITGTMNGVTFHYYAAPSYRELVAEHGFVLVDVHDDPGVSTYFLARRLW
Ga0314793_008469_5_292	3300034668	Soil	MLFHLEPRDQAAVFAAVSRVLTPGAPFLFTAAEIPDVPPDDLGITGTMNGVTFRYYAVADYRTLIGEHGFELENVYDDPGVSTYYFSRKRSAAES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094370

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences