Metagenome Family F094354

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F094354
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	53 residues
Representative Sequence	VSLLFALVVSLCAATVAALFVTMWRDGDPVAAAALAFALLPVLILTIMAWRAAL
Number of Associated Samples	47
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.05 %
% of genes near scaffold ends (potentially truncated)	32.08 %
% of genes from short scaffolds (< 2000 bps)	77.36 %
Associated GOLD sequencing projects	46
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (79.245 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (42.453 % of family members)
Environment Ontology (ENVO)	Unclassified (42.453 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.528 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.98% β-sheet: 0.00% Coil/Unstructured: 39.02%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.1: Ferritin	d3bvfa1	3bvf	0.89212
a.24.27.1: MW0975(SA0943)-like	d2ap3a1	2ap3	0.88975
a.23.1.1: HSC20 (HSCB), C-terminal oligomerisation domain	d1fpoa2	1fpo	0.88656
a.25.1.1: Ferritin	d4cvra_	4cvr	0.88647
a.25.1.1: Ferritin	d3ka8a_	3ka8	0.88206

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00582	Usp	16.04
PF01546	Peptidase_M20	6.60
PF11387	DUF2795	5.66
PF00557	Peptidase_M24	4.72
PF01149	Fapy_DNA_glyco	4.72
PF06831	H2TH	2.83
PF07687	M20_dimer	1.89
PF03704	BTAD	1.89
PF08447	PAS_3	0.94
PF09250	Prim-Pol	0.94
PF00384	Molybdopterin	0.94
PF08352	oligo_HPY	0.94
PF13560	HTH_31	0.94
PF02776	TPP_enzyme_N	0.94
PF12728	HTH_17	0.94
PF01609	DDE_Tnp_1	0.94
PF04879	Molybdop_Fe4S4	0.94
PF00353	HemolysinCabind	0.94
PF13412	HTH_24	0.94
PF00583	Acetyltransf_1	0.94
PF09362	DUF1996	0.94
PF00496	SBP_bac_5	0.94
PF01037	AsnC_trans_reg	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	7.55
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	1.89
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	1.89
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.94
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.94
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.94
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.94
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.94
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.25 %
Unclassified	root	N/A	20.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.25 %
Unclassified	root	N/A	20.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.25 %
Unclassified	root	N/A	20.75 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	56.60 %
Unclassified	root	N/A	20.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.89 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.94 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.94 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	49.06 %
Unclassified	root	N/A	20.75 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	7.55 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.94 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.94 %
Candidatus Aegiribacteria	genus	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Aegiribacteria	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	28.30 %
Unclassified	root	N/A	20.75 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	7.55 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.89 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.89 %
Candidatus Dadabacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dadabacteria	0.94 %
unclassified Candidatus Aegiribacteria	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Aegiribacteria → unclassified Candidatus Aegiribacteria	0.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	28.30 %
Unclassified	root	N/A	20.75 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	7.55 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.89 %
Candidatus Aegiribacteria sp. MLS_C	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Aegiribacteria → unclassified Candidatus Aegiribacteria → Candidatus Aegiribacteria sp. MLS_C	0.94 %
Candidatus Dadabacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dadabacteria → Candidatus Dadabacteria bacterium	0.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	28.30 %
Unclassified	root	N/A	20.75 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.89 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1.89 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	1.89 %
Candidatus Aegiribacteria sp. MLS_C	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Aegiribacteria → unclassified Candidatus Aegiribacteria → Candidatus Aegiribacteria sp. MLS_C	0.94 %
Candidatus Dadabacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dadabacteria → Candidatus Dadabacteria bacterium	0.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.75 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	10.38 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	6.60 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	5.66 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	1.89 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	1.89 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1.89 %
Candidatus Aegiribacteria sp. MLS_C	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Aegiribacteria → unclassified Candidatus Aegiribacteria → Candidatus Aegiribacteria sp. MLS_C	0.94 %
Candidatus Dadabacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dadabacteria → Candidatus Dadabacteria bacterium	0.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.75 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	10.38 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	6.60 %
Rubrobacter xylanophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	2.83 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1.89 %
Rubrobacter tropicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter tropicus	1.89 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → environmental samples	1.89 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1.89 %
Rubrobacter radiotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	0.94 %
Candidatus Aegiribacteria sp. MLS_C	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Aegiribacteria → unclassified Candidatus Aegiribacteria → Candidatus Aegiribacteria sp. MLS_C	0.94 %
Candidatus Dadabacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dadabacteria → Candidatus Dadabacteria bacterium	0.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.75 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	10.38 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	6.60 %
Rubrobacter xylanophilus DSM 9941	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus → Rubrobacter xylanophilus DSM 9941	2.83 %
uncultured Arthrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → environmental samples → uncultured Arthrobacter sp.	1.89 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1.89 %
Rubrobacter tropicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter tropicus	1.89 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1.89 %
Rubrobacter radiotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	0.94 %
Candidatus Aegiribacteria sp. MLS_C	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Aegiribacteria → unclassified Candidatus Aegiribacteria → Candidatus Aegiribacteria sp. MLS_C	0.94 %
Candidatus Dadabacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dadabacteria → Candidatus Dadabacteria bacterium	0.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2119805009\|FNTS007_GKN1E7E01AEI3X	Not Available	510	Open in IMG/M
2119805012\|FNTS067_GJ87FRN01E4BI9	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	519	Open in IMG/M
3300000095\|LCrCPGB2aDRAFT_c000415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	5763	Open in IMG/M
3300000095\|LCrCPGB2aDRAFT_c001710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	3660	Open in IMG/M
3300000095\|LCrCPGB2aDRAFT_c002020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	3435	Open in IMG/M
3300005562\|Ga0058697_10028144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus → Rubrobacter xylanophilus DSM 9941	2022	Open in IMG/M
3300005562\|Ga0058697_10028530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus → Rubrobacter xylanophilus DSM 9941	2012	Open in IMG/M
3300005562\|Ga0058697_10426941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	662	Open in IMG/M
3300005562\|Ga0058697_10624199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	565	Open in IMG/M
3300005981\|Ga0081538_10032317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3509	Open in IMG/M
3300005981\|Ga0081538_10133939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1158	Open in IMG/M
3300006169\|Ga0082029_1792780	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300006876\|Ga0079217_11557766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300006894\|Ga0079215_10852801	Not Available	645	Open in IMG/M
3300006918\|Ga0079216_10180070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1136	Open in IMG/M
3300007004\|Ga0079218_12447682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	615	Open in IMG/M
3300007004\|Ga0079218_12459832	Not Available	614	Open in IMG/M
3300007004\|Ga0079218_12927032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	574	Open in IMG/M
3300007790\|Ga0105679_10413608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1878	Open in IMG/M
3300007790\|Ga0105679_10463693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1031	Open in IMG/M
3300007790\|Ga0105679_10680898	All Organisms → cellular organisms → Bacteria	3284	Open in IMG/M
3300007790\|Ga0105679_10905733	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300007790\|Ga0105679_10914314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1838	Open in IMG/M
3300009147\|Ga0114129_13129546	Not Available	540	Open in IMG/M
3300009789\|Ga0126307_10022590	All Organisms → cellular organisms → Bacteria	4767	Open in IMG/M
3300009789\|Ga0126307_10041484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3573	Open in IMG/M
3300009789\|Ga0126307_10078060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2612	Open in IMG/M
3300009789\|Ga0126307_10109267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter tropicus	2196	Open in IMG/M
3300009789\|Ga0126307_10192172	All Organisms → cellular organisms → Bacteria	1637	Open in IMG/M
3300009789\|Ga0126307_10262738	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300009789\|Ga0126307_10465115	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300009840\|Ga0126313_10000593	All Organisms → cellular organisms → Bacteria	17552	Open in IMG/M
3300009840\|Ga0126313_10114640	All Organisms → cellular organisms → Bacteria	1999	Open in IMG/M
3300009840\|Ga0126313_10141299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1810	Open in IMG/M
3300009840\|Ga0126313_10190754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1569	Open in IMG/M
3300009840\|Ga0126313_10902774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	721	Open in IMG/M
3300009840\|Ga0126313_11274770	Not Available	607	Open in IMG/M
3300010036\|Ga0126305_10020569	All Organisms → cellular organisms → Bacteria	3473	Open in IMG/M
3300010036\|Ga0126305_10077533	All Organisms → cellular organisms → Bacteria	1950	Open in IMG/M
3300010036\|Ga0126305_10120044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1604	Open in IMG/M
3300010036\|Ga0126305_10335428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	987	Open in IMG/M
3300010037\|Ga0126304_10061609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → environmental samples → uncultured Arthrobacter sp.	2302	Open in IMG/M
3300010037\|Ga0126304_11241520	Not Available	511	Open in IMG/M
3300010038\|Ga0126315_10012014	All Organisms → cellular organisms → Bacteria	4135	Open in IMG/M
3300010038\|Ga0126315_10530314	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300010038\|Ga0126315_10747661	Not Available	641	Open in IMG/M
3300010039\|Ga0126309_10001298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	8803	Open in IMG/M
3300010039\|Ga0126309_10011226	All Organisms → cellular organisms → Bacteria	3692	Open in IMG/M
3300010039\|Ga0126309_10198564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1109	Open in IMG/M
3300010039\|Ga0126309_10367562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	852	Open in IMG/M
3300010039\|Ga0126309_10385811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	834	Open in IMG/M
3300010039\|Ga0126309_10778150	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dadabacteria → Candidatus Dadabacteria bacterium	622	Open in IMG/M
3300010040\|Ga0126308_10068669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter tropicus	2105	Open in IMG/M
3300010040\|Ga0126308_10147505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus → Rubrobacter xylanophilus DSM 9941	1483	Open in IMG/M
3300010040\|Ga0126308_10284113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1084	Open in IMG/M
3300010041\|Ga0126312_10250311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1244	Open in IMG/M
3300010041\|Ga0126312_10261906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1216	Open in IMG/M
3300010044\|Ga0126310_10008071	All Organisms → cellular organisms → Bacteria	4746	Open in IMG/M
3300010044\|Ga0126310_10292494	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300010044\|Ga0126310_10364179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1018	Open in IMG/M
3300010044\|Ga0126310_10494748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	892	Open in IMG/M
3300010044\|Ga0126310_10550641	Not Available	852	Open in IMG/M
3300010044\|Ga0126310_10896412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690	Open in IMG/M
3300010045\|Ga0126311_10076019	All Organisms → cellular organisms → Bacteria	2240	Open in IMG/M
3300010045\|Ga0126311_10338033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1144	Open in IMG/M
3300010045\|Ga0126311_10959843	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300010045\|Ga0126311_11594856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300010166\|Ga0126306_10209688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → environmental samples → uncultured Arthrobacter sp.	1474	Open in IMG/M
3300018432\|Ga0190275_10086315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2740	Open in IMG/M
3300018432\|Ga0190275_12596913	Not Available	584	Open in IMG/M
3300018465\|Ga0190269_11511432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300018466\|Ga0190268_10104819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1325	Open in IMG/M
3300018466\|Ga0190268_10301767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	962	Open in IMG/M
3300018719\|Ga0193596_1015263	Not Available	1177	Open in IMG/M
3300018757\|Ga0193612_1002808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	3029	Open in IMG/M
3300018757\|Ga0193612_1044092	Not Available	762	Open in IMG/M
3300018757\|Ga0193612_1083573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	528	Open in IMG/M
3300018877\|Ga0193600_1100009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	680	Open in IMG/M
3300018891\|Ga0193610_1079023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	867	Open in IMG/M
3300018891\|Ga0193610_1146775	Not Available	571	Open in IMG/M
3300018914\|Ga0193594_1031501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1398	Open in IMG/M
3300018915\|Ga0193591_1120375	Not Available	812	Open in IMG/M
3300018915\|Ga0193591_1134639	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300018915\|Ga0193591_1150654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	692	Open in IMG/M
3300018915\|Ga0193591_1155642	Not Available	676	Open in IMG/M
3300018917\|Ga0193611_1111852	Not Available	713	Open in IMG/M
3300018918\|Ga0193616_1143186	Not Available	656	Open in IMG/M
3300018931\|Ga0193601_1063612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1099	Open in IMG/M
3300018931\|Ga0193601_1140578	Not Available	656	Open in IMG/M
3300018933\|Ga0193614_1107281	Not Available	776	Open in IMG/M
3300018962\|Ga0193589_1049178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1255	Open in IMG/M
3300019135\|Ga0193602_1133916	Not Available	560	Open in IMG/M
3300019142\|Ga0193597_1122737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	791	Open in IMG/M
3300019377\|Ga0190264_10430361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	870	Open in IMG/M
3300019377\|Ga0190264_10752992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	731	Open in IMG/M
3300021184\|Ga0196959_10116559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627	Open in IMG/M
3300028744\|Ga0307318_10127911	Not Available	867	Open in IMG/M
3300031852\|Ga0307410_10034353	All Organisms → cellular organisms → Bacteria	3283	Open in IMG/M
3300031995\|Ga0307409_100274584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1554	Open in IMG/M
3300032002\|Ga0307416_100413060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1391	Open in IMG/M
3300032002\|Ga0307416_100663157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1129	Open in IMG/M
3300032004\|Ga0307414_10411927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1177	Open in IMG/M
3300032159\|Ga0268251_10026390	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Aegiribacteria → unclassified Candidatus Aegiribacteria → Candidatus Aegiribacteria sp. MLS_C	1768	Open in IMG/M
3300032159\|Ga0268251_10226084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	745	Open in IMG/M
3300032159\|Ga0268251_10453473	Not Available	565	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.85%
Host-Associated	Host-Associated	14.15%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.85%
Plants	Host-Associated → Plants	14.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.85%
Phylloplane	Host-Associated → Plants → Phylloplane	6.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.66%
Roots	Host-Associated → Plants → Roots	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.60%
Sand	Environmental → Terrestrial → Soil → Sand	29.25%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	6.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.66%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.94%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	29.25%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	6.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.66%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	1.89%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	42.45%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	23.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.55%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	6.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	5.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	1.89%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.94%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2119805009	Soil microbial communities from sample at FACE Site NTS_007 Nevada Test Site	Environmental	Open in IMG/M
2119805012	Soil microbial communities from sample at FACE Site NTS_067 Nevada Test Site	Environmental	Open in IMG/M
3300000095	Soil microbial communities from Colorado Plateau, Green Butte sample - Light Crust, Colorado Plateau, Green Butte 2	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018719	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018757	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 42 hrs after wetting v1	Environmental	Open in IMG/M
3300018877	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 42 hrs after wetting v1	Environmental	Open in IMG/M
3300018891	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018914	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 42 hrs after wetting v1	Environmental	Open in IMG/M
3300018915	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018917	Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018918	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018931	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018933	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 42 hrs v1	Environmental	Open in IMG/M
3300018962	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300019135	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300019142	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid late stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FNTS007_09909500	2119805009	Soil	MGVIFALVTSLCAAVVAGLFVTMWLDGDAMTTTALAVALLPTLVLTMMAWGEAL
FNTS067_05726850	2119805012	Soil	VSVLFALVVSLCAAVLSVLFVTMWLDGDGVTTTALAVALLPMVVLTML
LCrCPGB2aDRAFT_00041511	3300000095	Soil	VSVVFALVVTLCAAVVAALFVTMWLDGDGVATAALAFALLPTLVLAMLAWGEAL*
LCrCPGB2aDRAFT_0017109	3300000095	Soil	VSVLFALVVSLCASVAVFLFVIMWLDRDFVAAVALAFALFPLLVLTIMAWREAL*
LCrCPGB2aDRAFT_0020207	3300000095	Soil	VIVLFALVTSLCAAVVAVLFVTMWLDRDRVTTAALAFALLPMLVLTMMAWGEAL*
Ga0058697_100281445	3300005562	Agave	VSLLFALVVSLCAATVAALFVSMWRDGDPVAAAALAFALLPVLILAIMAWRAAL*
Ga0058697_100285303	3300005562	Agave	MILLFALVITLCAAIVATLFVTMWRDGDLVAAAALAFALLPVLILTIIAWRVAL*
Ga0058697_104269411	3300005562	Agave	VSLLFALVVSLCAATVAALFVSMWRDGDPVAAAALAFALL
Ga0058697_106241992	3300005562	Agave	GSVSLLFALVVSLCAATVAALFITMWRDGDPVAATALAFALLPVLILTIMAWRAAL*
Ga0081538_100323174	3300005981	Tabebuia Heterophylla Rhizosphere	VSLLFALVVSLCAATVAALFIIMWRDGDPVAAAALAFALLPVLVLAIVAWRAVL*
Ga0081538_101339391	3300005981	Tabebuia Heterophylla Rhizosphere	MSVLFALVITLCAATVAILFVTMWRDGDLVVAAALAFALLPVLVLTIMAWRAAL*
Ga0082029_17927803	3300006169	Termite Nest	LSLLFALVVSLCAATVATLFVMMWRDGDPVASAVLAFALLPVLILTIMAWRAAL*
Ga0079217_115577662	3300006876	Agricultural Soil	QQRNRGHEEVGMSLLFALVITLCAATVATLFVIMWRDGDLVAAAALAFALLPVLILTIIAWRAAL*
Ga0079215_108528012	3300006894	Agricultural Soil	VSLLFALVVSLCAATVAALFVTMWRDGDPVAAAALAFALLPVLILAILAWRAAL*
Ga0079216_101800701	3300006918	Agricultural Soil	MSLLFALVITLCAATVATLFVIMWRDGDLVAAAALAFALLPVLILTIIA
Ga0079218_124476821	3300007004	Agricultural Soil	VSLLFALVVSLCAATVAALFITMWRDGDPLAAAALALALLPVLVLAIMAWRAVL*
Ga0079218_124598321	3300007004	Agricultural Soil	MSLLFALVITLCAATVATLFVIMWRDGDLVAAAALAFALLPVLILTIIAWRAAL*
Ga0079218_129270321	3300007004	Agricultural Soil	VSLLFALVVSLCAATVAALFVTMWRDGDPVAAAALAFALLPVLVLAI
Ga0105679_104136085	3300007790	Soil	VSLLFALVVSLCAATVAALFVSMWRHGDFVAAAALAFALLPVLILTIMAWRAAL*
Ga0105679_104636932	3300007790	Soil	VSLLFALVVSLCAATVAALFITMWRDGDPVAATVLAFALLPVLILTIMAWRAAL*
Ga0105679_106808983	3300007790	Soil	VSLLFALVVSLCAATVAALFVTMWHDGDPVAAAALAFALLPMLVLTIIAWRAAL*
Ga0105679_109057332	3300007790	Soil	VSLLFALVVSLCAATVAALFLTMWRDGDPVAATALGLALLTVLILTIMAWRAAL*
Ga0105679_109143143	3300007790	Soil	VILLLFALVVSVCATIVAILFVIMWRDGDPVGAAALAFALLPVLILTIMAWRAAL*
Ga0114129_131295462	3300009147	Populus Rhizosphere	VSLLFALVVSLCAATVAALFVTMWRDGDPVAAAALAFTLLPVLILTILAWRAVL*
Ga0126307_100225903	3300009789	Serpentine Soil	VSLLFALVVSLCAATVATLFTIMWRDGDPVAATVLGFALLPVLILTIMAWRVAL*
Ga0126307_100414846	3300009789	Serpentine Soil	VSLLFALVVSLCAATVAALFVTMWRDGDPVAAVALAFALLPVLILTIMAWRAAL*
Ga0126307_100780601	3300009789	Serpentine Soil	VSLLFALVVSLCAATVAALFITMWRDGDPVAATALAFALLPVLILTIMAWRAAL*
Ga0126307_101092672	3300009789	Serpentine Soil	VSLLFALVVSVCAATVAALFVSMWRDGYPVAVVALAIALLPVLILTVIAWRAAL*
Ga0126307_101921722	3300009789	Serpentine Soil	MSLLFALVITLCAATVATLFVIMWRDGDPVAAAALAFALLPVLILTIMAWRLAL*
Ga0126307_102627382	3300009789	Serpentine Soil	VSLLFALVVSLCAVTVAALFLTMWRDGDPVSATALAIALLPMLILTIMALRAAL*
Ga0126307_104651152	3300009789	Serpentine Soil	LSLLFALVVSLCAATVATLFVIMWRDGDLVAAAVLGFALLPVLILTIMAWRAAL*
Ga0126307_117872892	3300009789	Serpentine Soil	VAALFVSMWRDGDPVAVAALAFALLPVLILTILAWRPAL*
Ga0126313_1000059314	3300009840	Serpentine Soil	VSLLFALVVSLCAATVAALFITLWRDGDPVAATALAFALLPVLILTIMAWRAAL*
Ga0126313_101146402	3300009840	Serpentine Soil	VSLLFALVVSLCAATVAALFLTMWRDGDPVAATALGLALLPMLILTIMAWRAAL*
Ga0126313_101412992	3300009840	Serpentine Soil	VSLLFALIVSLCAATVAALFITMWRDGDLVAATALALALLPVLILTIMAWRAAL*
Ga0126313_101907542	3300009840	Serpentine Soil	VSLLFALVVSLCAATVAALFVSMWRDGDPVAVAALAFALLPVLILTILAWRPAL*
Ga0126313_109027741	3300009840	Serpentine Soil	EGREEGSVSLLFALVVSLCAATVAALFITMWRDGDPVAATALAFALLPVLILTIMAWRAAL*
Ga0126313_112747701	3300009840	Serpentine Soil	VSLLFALVVSLCAATVAALFVSMWRDGDPVAVAALAFALL
Ga0126305_100205695	3300010036	Serpentine Soil	VRKEGSVSLLFALVVSLCAATVATLFITMWRDGDPVAATALALALLPVLILTIMAWRAAL
Ga0126305_100775331	3300010036	Serpentine Soil	EEGSVSLLFALVVSLCAATVAALFITMWRDGDPVAATALAFALLPVLILTIMAWRAAL*
Ga0126305_101200442	3300010036	Serpentine Soil	VSLLFALVVSLCAATVAALFLTMWRDGDPVAATALGLALLPVLILTIMAWRAAL*
Ga0126305_103354281	3300010036	Serpentine Soil	ALVVSLCAATVAALFVSMWRDGDPVAVAALAFALLPVLILTILAWRAAL*
Ga0126304_100616092	3300010037	Serpentine Soil	MSLLFALVITLCAATVATLFLIMWRDGDLVAAAALAFALLPVLILTIIAWRAAL
Ga0126304_112415202	3300010037	Serpentine Soil	MSLLFALVITLCAATVAILFVIMWRDGDLVAAAALAFALLPVLILTIIAWRAAL*
Ga0126315_100120143	3300010038	Serpentine Soil	VSLLFALVVSLCAATVVALFVSMWRDGDPVAVAALAFALLPVLILTILAWRAAL*
Ga0126315_105303141	3300010038	Serpentine Soil	ALVVSLCAATVAALFVSMWRDGDPVAAAALAFALLPVLILAIMAWRAAL*
Ga0126315_107476611	3300010038	Serpentine Soil	VSFLFALVDSLCAATVAALFITMWRDGDPVAATALAFALLPVLILTIMAWRAAF*
Ga0126309_100012986	3300010039	Serpentine Soil	MSLLFALVVSLCAATVAALFISMWRDGDPVAATALAFALLPVLILTIMAWRAAL*
Ga0126309_100112267	3300010039	Serpentine Soil	VSLLFALVVSLCAATVAALFITMWRDGDVVGAAVLAFALLPVLILTIMAWRAAL*
Ga0126309_101985642	3300010039	Serpentine Soil	MVLLLALDASICAAVIALLFATMWLDGDAVTTATLAFALLPTLVFALLAWRMAP*
Ga0126309_103675621	3300010039	Serpentine Soil	VSLLFALIVSLCAATVAALFITMWRDGDPVAATALALALLPVLILTIMAWRAAL*
Ga0126309_103858112	3300010039	Serpentine Soil	LSLLFALVVSLCAATIATLFVIMWRDGDPVAAAVLAFALLPVLILTIMAWRAAL*
Ga0126309_107781502	3300010039	Serpentine Soil	VSLLFALVVSLCAATVAALFITMWRDGDPVAATALALALLPVLVLTIMAWRAAL*
Ga0126308_100686692	3300010040	Serpentine Soil	VSLLFALVVSLCAATVAALFVGMWRDGDPVAAAALAFALLPVLILTIMAWRAPL*
Ga0126308_101475053	3300010040	Serpentine Soil	HEEGRKEGSVSLLFALVVSLCAATVAALFVSMWRDGDPVAGAALAFALLPVLILAIMAWRAAL*
Ga0126308_102841131	3300010040	Serpentine Soil	TEAGGMSVLFAMVTSLCAAVLAALFVTAWRDGESAVTTALSAALLSVLILTMMAWEEAL*
Ga0126312_102503112	3300010041	Serpentine Soil	VSLLFALVVSLCAATVVALFVSMWRDGDPVAVAALAFALLPVLILTILAWRAA
Ga0126312_102619062	3300010041	Serpentine Soil	VSLLFALVVYLCAATVAALFITMWRDGDPVAATALAFALLPVLILTIMAWRAAL*
Ga0126310_100080713	3300010044	Serpentine Soil	LSLLFALVVSLCAATVAALFITMWRDGDPVAATALALALLPVLILTILAWRAAL*
Ga0126310_102924943	3300010044	Serpentine Soil	LRAREERSVSLLFALVVSLCAATVAALFVTMWRDGDPVAAAALAFALLPVLILTIMAWRAAL*
Ga0126310_103641792	3300010044	Serpentine Soil	VHEDDREERSLSILFALVVSLCAATVATLFVIMWRDGDLVAAAVLAFALLPVLILTIIAWRAAL*
Ga0126310_104947483	3300010044	Serpentine Soil	FALVVSLCAATVAALFITMWRDGDPVAATALAFALLPVLILTIMAWRAAL*
Ga0126310_105506411	3300010044	Serpentine Soil	TSRKVRSVSLLFALVVSLCAATVAALFITLWRDGDPVAATALAFALLPVLILTIMAWRAAL*
Ga0126310_108964122	3300010044	Serpentine Soil	SVSLLFALVVSLCAATVAALFITMWRDGDPVAATALAFALLPVLILTIMAWRAAL*
Ga0126311_100760195	3300010045	Serpentine Soil	VHEDDREERSLSILFALVVSLCAATVATLFVIMWRDGDLVAAAVLAFALLPVLILTIMAWRESL*
Ga0126311_103380334	3300010045	Serpentine Soil	GGMSVLFAMVTSLCAAVLAALFVTAWRDGESAVTTALSAALLSVLILTMMAWEEAL*
Ga0126311_109598431	3300010045	Serpentine Soil	VSLLFALVVSLCAATVAALFLTMWRDGDPVAATALGLALLPV
Ga0126311_115948562	3300010045	Serpentine Soil	LCAATVAALFITMWRDGDPVAATALAFALLPVLILTIIAWRAAL*
Ga0126306_102096881	3300010166	Serpentine Soil	MSLLFALVITLCAATVATLFLIMWRDGDLVAAAALAFALLPVLILTIIAWRAAL*
Ga0190275_100863153	3300018432	Soil	MSLLFALVITLCAATVATLFVIMWRDGDLVAAAALAFALLPVLILTIIAWRAAL
Ga0190275_125969132	3300018432	Soil	FALVVSMCATAVAVLFVIMWRDGDPVGAAALAFALLPVLVLAIVAWRAAL
Ga0190269_115114322	3300018465	Soil	EEGRKEGSVSLLFALVVSLCAATVAALFVSMWRDGDPVAAAALAFALLPVLILTIIAWRAAL
Ga0190268_101048193	3300018466	Soil	VTLLLFALVVSMCAATVAVLFVIMWRDGDPVGAAVLAFALLPVLVLTIMVWRAVL
Ga0190268_103017672	3300018466	Soil	VSLLFALVVSLCAATVAALFVTMWRDGDLVGAAVLAFALLPVLILTIIAWRAAL
Ga0193596_10152635	3300018719	Soil	MSLLFALVVTLCAAVVDALFVTMWLDGDVIATAAVAYALLPVLVLAMLAWGEAL
Ga0193612_10028082	3300018757	Soil	LSVVFALVVTLCAAVVAALFVTMWLDGDGVATAALAFALLPTLVLAMLAWGEAL
Ga0193612_10440921	3300018757	Soil	VSVLFALVVSLCAAVAAALFVTMWLDGDAAATAALAFALLPLLVLTMMAWGEAL
Ga0193612_10835732	3300018757	Soil	VSVLFALVVSLCASVAVFLFVIMWLDRDFVAAVALAFALFPLLVLTIMAWRETL
Ga0193600_11000091	3300018877	Soil	MSSLFALVTSLCAATVAVLFVTMWLDGDRVSTAALAFALFSVLVLAMM
Ga0193610_10790231	3300018891	Soil	MAVLFALVVSLCAAVVAALFVAMWFDGDAIATAALVVALFPVLILAMMAWGEAL
Ga0193610_11467752	3300018891	Soil	MSLLFALVVTLCAAVVAALFVTLWLDGDVIATAALAYALLPVLVLAMLAWGEAL
Ga0193594_10315012	3300018914	Soil	MGVLFALVVSLCAAVVAALFVAMWFDGDAIATAALVVALFPVLILAMMAWGEAL
Ga0193591_11203752	3300018915	Soil	MSSLFALVTSLCAATVAVLFVTMWLDGDRVSTAALAFALFSVLVLAMMAWGEAL
Ga0193591_11346391	3300018915	Soil	LVTSLCAAVVAVLFVTMWLDGDGVATAALAFALLPTLVLAMLAWGEAL
Ga0193591_11506542	3300018915	Soil	VSVLFALVVSLCASVAVFLFVIMWLDRDFVAAVALAFALFPLLVLTFMAWGEAL
Ga0193591_11556423	3300018915	Soil	MSLLFALVVTLCAAVVAALFVSMWLDGDVIATAAVAYALLPVLVLAMLAWGEAL
Ga0193611_11118522	3300018917	Soil	VSVIFAVVTSLCAAVVAVLFVTMWLDRDRVSTAALAFALLPVLVLTMMAWGEAL
Ga0193616_11431862	3300018918	Soil	MGASRMSLLFALVVSLCAATTAALFVTMWLDGDAIATAALVVALFPVLILAMMAWGEAL
Ga0193601_10636121	3300018931	Soil	VTSLCAAVVAVLFVTMWLDGDGVTTTALAVALLPVLVLTMLAWGEAL
Ga0193601_11405782	3300018931	Soil	MSFLFALVVTLCSAVVAALFVTMWLDGDGIATAAMAFALFPTLVLAMLAWGEAL
Ga0193614_11072813	3300018933	Soil	MSLLFALVVTLCAAVVAALFVTLWLDGDVIATAALAYALLPVLV
Ga0193589_10491783	3300018962	Soil	VSVLFALVVTLCAAVVAVLFVTMWLDGDAVTTTALAFALLPVLVLTMMAWGEAL
Ga0193602_11339163	3300019135	Soil	VSVLFALVVSLCAAVAAALFVTMWLDGDAAATAALAFALLPLLVLTMMAW
Ga0193597_11227372	3300019142	Soil	MIFIFALVTSLSAAVVAVLFITMWFDGDGVTTTALAVALLPMLVLTMMAWREAL
Ga0190264_104303611	3300019377	Soil	VSLLFALVVSLCAATVAALFMIMWRDGDPVAAAALA
Ga0190264_107529922	3300019377	Soil	VSVIFALVTSLCAAVVAVLFVTMWLDGDGVTTTALAVALLPMLVLTMLAWGEAL
Ga0196959_101165592	3300021184	Soil	VILLFALVVSLCAATVAALFVIMWRDGDHIAAAALAFALLPVLVLAIVAWRAVL
Ga0307318_101279112	3300028744	Soil	VSLLFALVVSLCAATVAALFVTMWRDGDPVAAAALAFALLPVLILTIMAWRAAL
Ga0307410_100343534	3300031852	Rhizosphere	VSFLFALVVSLCAATVAALFITMWRDGDPVAATALAFALLPVLILTIMAWRAAF
Ga0307409_1002745842	3300031995	Rhizosphere	VSLLFALVVSLCAATVAALFVSMWRDGDPVAVAALAFALLPVLILTILAWRAAL
Ga0307416_1004130601	3300032002	Rhizosphere	VSFLFALVVSLCAATVAALFITMWRDGDPVAATALAFALLPVLIL
Ga0307416_1006631572	3300032002	Rhizosphere	VSVLFALVTSLCAAVVAALFMRMWLDGDVALSTALAAALLSTLVLAMMAWEEAL
Ga0307414_104119271	3300032004	Rhizosphere	VSFLFALVVSLCAATVAALFITMWRDGDPVAATALAFALLPV
Ga0268251_100263902	3300032159	Agave	MILLFALVITLCAAIVATLFVTMWRDGDLVAAAALAFALLPVLILTIIAWRVAL
Ga0268251_102260842	3300032159	Agave	HEEGREDGSVSLLFALVVSLCAATVAALFITMWRDRDPVATTALAFALLPVLILTIMAWRAAL
Ga0268251_104534732	3300032159	Agave	VSLLFALVVSLCAATVAALFITMWRDGDPVAATALALALVPVLILTIMAWRAAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094354

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences