NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F094351

Metagenome / Metatranscriptome Family F094351

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F094351
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 78 residues
Representative Sequence MDNPAAPAEALNMEQLLHLHTLTKDVSKFCQKQLRGYLDTMALLFRPRRMLGEAMEGAERESVGGS
Number of Associated Samples 97
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(10.377 % of family members)
Environment Ontology (ENVO) Unclassified
(28.302 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(43.396 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.00%    β-sheet: 0.00%    Coil/Unstructured: 50.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF13646HEAT_2 6.60
PF13599Pentapeptide_4 2.83
PF00805Pentapeptide 1.89
PF11876DUF3396 1.89
PF09937DUF2169 0.94
PF05943VipB 0.94
PF04965GPW_gp25 0.94
PF00109ketoacyl-synt 0.94
PF13665Tox-PAAR-like 0.94
PF09346SMI1_KNR4 0.94
PF15575Imm49 0.94
PF14412AHH 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG1357Uncharacterized conserved protein YjbI, contains pentapeptide repeatsFunction unknown [S] 1.89
COG3517Predicted component TssB of the type VI protein secretion system, VipA/VipB/TssB familyIntracellular trafficking, secretion, and vesicular transport [U] 0.94


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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil10.38%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds7.55%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog7.55%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.77%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.83%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.83%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.83%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere2.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.83%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.89%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.89%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.89%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.89%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.89%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.89%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.94%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.94%
SedimentEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment0.94%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.94%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.94%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.94%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.94%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.94%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.94%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.94%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.94%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.94%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.94%
Poplar Biomass BioreactorEngineered → Solid Waste → Wood → Composting → Bioreactor → Poplar Biomass Bioreactor0.94%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908004Poplar biomass bioreactor microbial communities from Brookhaven National Lab, NY - total biomass decay communityEngineeredOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005607Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006642Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-DEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010937Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139EnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2EnvironmentalOpen in IMG/M
3300012906Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014499Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaGEnvironmentalOpen in IMG/M
3300014839Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020034Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300021858Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026294Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028574Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2EnvironmentalOpen in IMG/M
3300028766Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2EnvironmentalOpen in IMG/M
3300029952II_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029955II_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300030020II_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300030041Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1EnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300034125Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
PBDC3_056584002124908004Poplar Biomass BioreactorMETPAESLNVEQLLNLHTLTKDVAKVCQKQLRSHLDTIALLFRPRRILGDAMEGAERES
F14TC_10220520033300000559SoilMSNDAGFVETLNVERLLHLHTLTKDVARFCQKQLRGYLDTLALLFRPRRMLGNAIEGGEPESGGGAERTAN
Ga0063356_10216158623300004463Arabidopsis Thaliana RhizosphereMDNPAGQTEALNVERLLHLHTLTKEVAKFCQKQLRAYLDSMSLLFRPRRILGDAIEGGER
Ga0063356_10285292123300004463Arabidopsis Thaliana RhizosphereMETPAESLNVEQLLHLHTLTKDVAKVCQKQLRSYLDTTALLFRPRRILGDAMEGAERETVGGSDRNLTELRDL
Ga0066395_1022670813300004633Tropical Forest SoilMVDSGGAAEPLNVEQLLRLHTITKDVSRFCQKQLRGYLETLALLFRPRRILGEAIEGGEKESVGGSDRTLAEL
Ga0062594_10333534723300005093SoilMDNPAAPAEALNMEQLLHLHTLTKDVSKLCQKQLRGYLDTMALLFRPRRMLGEAMEGGERETVGGSDRTVAELRDLYRRVSVRPF
Ga0070690_10152430113300005330Switchgrass RhizosphereMDDWFVPAEALKVEQLLQLHAVTKEVSKFFQKQLRGYLDSMALLFRPRRILGEAIEGGERESVGGSERTLSELRELYRRVAVRPFGLRPELSVPL
Ga0066388_10798383823300005332Tropical Forest SoilMDNPAASAQSLNVEQLLQLHNLTKDVAKVCQKQLRGYLDTMALLFRPRRILGAAMEGAEPESGVGSERTVTELRELFK
Ga0068868_10224963913300005338Miscanthus RhizosphereMDNPSLPTQSLNVEQLLRLHALTRDVSKFCQKQFRGYLETMSLLFRPRR
Ga0070689_10030622623300005340Switchgrass RhizosphereMDNPAAPAEALNMEQLLHLHTLTKDVSKLCQKQLRGYLDTMALLFRPRRMLGEAMEGGERETVGGSDRTV
Ga0070688_10054329413300005365Switchgrass RhizosphereMDNPAAPAEALNMEQLLHLHTLTKDVSKLCQKQLRGYLDTMALLFRPRRMLGEAMEGGERETVGGSDRTVA
Ga0070663_10066333723300005455Corn RhizosphereMDNPSLPTQSLNVEQLLRLHALTRDVSKFCQKQFRGYLETMSLLFRPRRILGEAIEGGEK
Ga0070681_1108513413300005458Corn RhizosphereMDNPAAAATEPLKIEQLLHLHTLTKEVSKFCQRQLRGHLDTLAILFRPRRILGEFVEGSERESVGGSD
Ga0070679_10090026413300005530Corn RhizosphereMFRRQEIDMDNPAAAATEPLKIEQLLHLHTLTKEVSKFCQRQLRGHLDTLAILFRPRRILGEFVEGSERESVGGSDRTLAELKDLYKRVALRPFDLRPELAVP
Ga0070672_10163507723300005543Miscanthus RhizosphereMENPAASTQALNLEQLLQLHALTKDVAKFCHKQLRGYLETLALLFRPRRILGEAIEGTEREGAGGSERNVAELRELYQRVAGRPFDLRSDLALPIESV
Ga0070664_10097285033300005564Corn RhizosphereMDNPPPAETLNVQRLLQLHTLTREVSKFCQKQLRGYLDTMALLFRPRRMLGQAIEGGEKESVGGSEKTVIELRELYRKVAVRPFDL
Ga0066691_1067814413300005586SoilMDSSVGHAESLNVEQLLRLHSLTKEVSKFCQKQLRGYLDTIAMLFRPRRILGEAIEGGEREGVGGSD
Ga0070740_1020908913300005607Surface SoilMDNPAAPTESLDIEQLLRLHTLTKEVARLCQKQLRAYLDAIALLFRPRRMLGDAMEGAERESAGGSERTVAELRDLYRKVAPRPFDLRPELSFPL
Ga0068859_10222657523300005617Switchgrass RhizosphereMDNPAAPAEALNMEQLLHLHTLTKDVSKLCQKQLRGYLDTMALLFRPRRMLGEAMEGGERETV
Ga0068864_10215109523300005618Switchgrass RhizosphereMDNPAAPAESLNVEQLLQLHTLTKDVSKLCQKQLRGYLETLALLFRPRRMLGDAMEGAERETVGGSDRTLTELRDLYRKVAVRPFDLRPELTTPLESVSTQMQLYEWE
Ga0066903_10669741313300005764Tropical Forest SoilMDNPAAPAEALNVEQLLHLHTLTKEVSKFCQRQLRAYLDALAILFRPRRILGDAIEGSERESVGGSDRTLAELRELYRR
Ga0068863_10037314423300005841Switchgrass RhizosphereMDNPVGPAESLNVEQLLHLHTLTKEVSKFCQKQLRGYLETTSLLFRPRRILGEAIEGAEKESVGGSDRTVAELRELYRKVA
Ga0066790_1015473633300005995SoilMDNPAAPAEALNVEQLLHLHNLTKDLSKLCQKQLRGYLDTMALLFRPRRVLGDAME
Ga0075028_10023617313300006050WatershedsMDQTAAPASALNIEQLLQLHSLTKDVAKLCQKQLRTYLDTVAMLFRPRRTLGDAIEGSERESIANADRNVAELRELFRGVALRPFDVRPELNLPIESISTQIQLNEWE
Ga0075028_10082097213300006050WatershedsMDQSAAPAASALNVEQLLQLHSLTKDVAKLCQKQLRTYLDTVAMLFRPRRTLGDAIEGSERESIANADHNVAELRELFRSVALRPF
Ga0075017_10108412423300006059WatershedsMANQGIVIKEPLLVENRAAGAEALKIEELLHLHNLTKDVAKLCQKQLRGYLDTMALLFRPRRILGEAMEGSERESIVG
Ga0075015_10056888523300006102WatershedsVENRAAGAEALKIEELLHLHNLTKDVAKLCQKQLRGYLDTMALLFRPRRILGEAMEGSERESIVGAERTMAELRELY
Ga0075018_1004680243300006172WatershedsMDQSAAPASALNVEQLLQLHSLTKDVAKLCQTQLRTYLDTVAMLFRPRRTLGDSIEGSERESIANADRNVAELRELFRGVALRPFDLRPELSLPIESISTQIQLNEWE
Ga0070765_10117141523300006176SoilMDNPAAPAETLNVEQLLHLHTLTKELSKFCQKQLRSYLDTMALLFRPRRILGDAMEGAERESVGGSDRTVTELRELYRRVAVRPFD
Ga0097621_10163227313300006237Miscanthus RhizosphereMDNPAAPAESLNVEQLLHLHTLTKDVAKLCQKQLRAHLDTLALLFRPRRILGDAMEGAERETVGGSDRTLAELRDLYRKVALRPFDLRPELTLPLESVSTEMRLY
Ga0075021_1040254723300006354WatershedsMDQSAAPASALNIEQLLQLHSLTKDVAKLCQKQLRTYLDTVAMLFRPRRTLGDAIEG
Ga0068871_10146661513300006358Miscanthus RhizosphereMDNPAAPAEALNMEQLLHLHTLTKDVSKFCQKQLRGYLDTMALLFRPRRMLGEAMEGAE
Ga0068871_10148378423300006358Miscanthus RhizosphereMDDWFVPAEALKVEQLLQLHAVTKEVSKFFQKQLRGYLDSMALLFRPRRILGEAIEGG
Ga0075521_1057309233300006642Arctic Peat SoilMDNPAAPAAESLNVEQLLHLHTLTKDVARLCQKQLRGYLDTMALLFRPRRILGD
Ga0066665_1065214923300006796SoilMDKPAVPAESLNVEQLLHLHALTKEVSKFCQKQLKGYLDTMAMLFRPRRSLGDAIEGGEREAVGG
Ga0075424_10188183213300006904Populus RhizosphereMEQQPSLTPDINVEQLLHLHTVTKEVSKFCHRQLRGYLDAMAIVFRPRRILGEAIEGGER
Ga0066709_10129251513300009137Grasslands SoilMNPSDNLNAGQVLRLHNLTKDVSKFCERQLRTYLDALAPVFRARRIL
Ga0105248_1074582113300009177Switchgrass RhizosphereMDNPAAPAESLNVEQLLHLHTLTKDVAKLCQKQLRGHLDTLALLFRPRRILGDAMEGAERETVG
Ga0126382_1064469113300010047Tropical Forest SoilMDNPAAPAEVLNVEQLLRLHTLTKEVSKFCHKQLRAYLDTMALLFRPRRILGEAMEGAEPESVGGSDRIVAEL
Ga0126373_1320966713300010048Tropical Forest SoilMENRAAPTEALNVEQLLHLHNLTKDVSKFCQKQLRNYLDTTALLFRPRRMLGDAMEGAEHEAIWGSERNTAELRELYLRVAIRPFDLRPELNLPLESVSTQ
Ga0126372_1045007313300010360Tropical Forest SoilMVDSGGAAEPLNVEQLLRLHTITKDVSRFCQKQLRGYLETLALLFRPRRILGEAIEGGEKESVGGSDRTLAELREL
Ga0126378_1294676713300010361Tropical Forest SoilMDNPAASAAALNVEQLLHLHTLTKDVAKVCQKQLRAYLDTMALLFRPRRILGDYMEGAEKESVGGSDRTLAELR
Ga0134125_1075921623300010371Terrestrial SoilMENPASQTEALNVEQLLHLHTLTKDVAKFCQKQLRGYLDTTALLFRPRRILGDAMEGAERESVGGSE
Ga0126383_1231427613300010398Tropical Forest SoilMDNPAAPVASLNVEQLLQLHNLTKDVAKVCQKQLRGCLDTMALLFRPRRILGAAMEGAEPESGVGSERTVTELRELFKKVALRPFALRPELSFPLASAS
Ga0134127_1330381713300010399Terrestrial SoilMDNPAAPAESLNVEQLLHLHTLTKEVAKLCQKQLRGYLDTLALLFRPRRMLGDAMEGAERESVGGSKRAIAELRDLYRKAALRPFDLRPELNIPLESVSTQMQLYEW
Ga0137776_102276013300010937SedimentMDNQDVSTDSLNLEQLVQLHALTKDVSKFCHKQLRGYLDTAALLFRPRRILGEAIEG
Ga0137380_1108376213300012206Vadose Zone SoilMNKPAGPAESLNVEQLLHLHTLTKEVSKLCQKQLRGYLDTMALLFRPRRILGEAIEGGER
Ga0137361_1185509813300012362Vadose Zone SoilMDNPAAPAQALNIDELLHLHTLTKDVSKLCQKQLRGYLDTMALLFRPRRMLGEAVEGAEREAAGGSDRTIEEFRDLYRRV
Ga0150984_10754749333300012469Avena Fatua RhizosphereMPEQASAAQTLSLEQLLHLHTLTRELSRLYQRQLRGYLDTLALLFRPRRILGDAIE
Ga0137397_1107907523300012685Vadose Zone SoilMVNPSGSAESLNVEQLLHLRTLTEEVSKFCQKQLKGYLDTMAMLFRPRRSLGDAIEGGEREGVGGADRSLAGLREIYKCVALRPWDPPPE
Ga0157299_1006326513300012899SoilMEHQPSLKPDINVEQLLRLHALTREVSRFCQKQLRGYLDTMSLLFRPRRILGEAIEGGEKESVGGSERTVTELRELYRKVAVRPFELRPELGVPIE
Ga0157295_1014626713300012906SoilMEHQPSLKPDINVEQLLRLHALTREVSRFCQKQLRGYLDTMSLLFRPRRILGEAIEGGEKESVGG
Ga0137394_1064023523300012922Vadose Zone SoilMVNPSGSAESLNVEQLLHLRTLTEEVSKFCQKQLKGYLDTMAMLFRPRRSLGDVIEGGERESVGGSDRTLAEL
Ga0126375_1098820813300012948Tropical Forest SoilMDSPVGPAEPINVEQLLHLHTLTKEVSKFCQKQLRGYLDTIALLFRPRRILGEAIEGGEKESVGGSDRTLAELRELFRKVALRPFDLRQELNVPLESISTQMQLYEWE
Ga0126369_1022412533300012971Tropical Forest SoilMSEASLNVEQLLQLHALTREVSNFFQKQLRGYLDTLSLLFRPRRILGEAIEGGEKESVGGSDRNI
Ga0126369_1144386713300012971Tropical Forest SoilMDNPAAPAEVLNVEQLLRLHTLTKEVSKFCHKQLRAYLDTMALLFRPRRILGEAMEGAEPESVGGSDRIV
Ga0126369_1291345813300012971Tropical Forest SoilMDNPAAMAAEPLKIEQLLHLHTLTKEVSKFCQRQLRAHLDTLAILFRPRRILGEYIEGSERESVGGSDRTLAELRDL
Ga0157374_1289369113300013296Miscanthus RhizosphereMDNPAAPAEALNMEQLLHLHTLTKDVSKFCQKQLRGYLDTMALLFRPRRMLGEAMEGAERESVGGS
Ga0182012_1080157713300014499BogMDQSAATAPALNMEQLLQLHSLTKDVAKLCQKQLRTYLDTTAMLFRPRRSLGDAIEGSERESVPHSERNVTELRELYRKVALRPFDL
Ga0182027_1040338713300014839FenMDNSAAPAESLNVEQLLHLHTLTKEVAKVCQKQLRGYLDTLALLFRPRRMLGDAMEGAERETVGGSERTVAELRELYRKLALRPFDLRPELSLPLESVSTQ
Ga0157379_1252795813300014968Switchgrass RhizosphereMDNPAAPAESLNVEQLLHLHTLTKDVAKLCQKQLRGNLDTLALLFRPRRILGDAMEGAERETVGGSDRTLTELRDLYRKVALRPFDLRPELTLPLESVSTEMRLYEWEYL
Ga0157376_1207887913300014969Miscanthus RhizosphereMDNPAAPAEALNMEQLLHLHTLTKDVSKLCQKQLRGYLDTMALLFRPRRMLGEAMEGGERETVGGS
Ga0137409_1139647613300015245Vadose Zone SoilMDNPVVPVEALKIEQLLHLHTLTKEVSKFCQKQLRGYLDTMALMFRPRRILGDLIEGSEKESVGGSDRTLAELKEL
Ga0181520_1082478113300017988BogMDNPAPPADTLNVEQLLHLHTLTKDVAKVCQKQLRGFLDTMALLFRPRRILGDAIEGSERESVGSFDRNVAELRDLYRKVAPRQFDLRPELNFP
Ga0187771_1009959233300018088Tropical PeatlandMDNSAAPAESLNVDQLLQLHTLTKEVAKLCQKQLRGYLETMALLFRPRRMLGDAMEGAEREAVGGSERTVNELRDLYR
Ga0187771_1184081823300018088Tropical PeatlandMDNPAAPAEALNVEQLLHLHTLTKDLSKFCQKQLRAYLDTMALLFRPRRILGDAMEG
Ga0066662_1071451223300018468Grasslands SoilMDNPAAAAQSLNLDQLLHLHTLTKEVSKFCHKQLRGYLDTMALLFRPRRIFGDAMEGAERETAAGSERAVAELRDL
Ga0193753_10003171133300020034SoilMDNPAIPAESLKIEQLLQLHALTKDVSKFCQKQLRGYLDTAALLFRPRRTLGDAIEGSEPESAGSSERNVAELRELYRRVALRPFDLRPELTLQ
Ga0126371_1005012913300021560Tropical Forest SoilMDNPAASAAALNVEQLLHLHTLTKDVAKVCQKQLRAYLDTLALLFRPRRILGDFMEGAERESVGGSDRTLAELRDLYKKVALRPFD
Ga0126371_1059078023300021560Tropical Forest SoilMENRAVPAEALNVEQLLHLHNLTKDVSKFCQKQLRSYLDTAALLFRPRRMLGDAIEGAEPELIGGS
Ga0213852_115297353300021858WatershedsMDNPAPPAESLNVEQLLHLHTLTKDVAKVCQKQLRGYLDTLALLFRPRRIFGDAIEGAERESVAGADRNVAELRELYRKVALRPFDLRPELSLPLESV
Ga0242655_1015801713300022532SoilMDNLAGSAEALNVEQLLHIHTLTKEVAKACQKQLRGYLDTMAPLFRPRRMLGEAVEGTDRESATKSEQTIAEFREL
Ga0207707_1132844923300025912Corn RhizosphereMDNPAAAATEPLKIEQLLHLHTLTKEVSKFCQRQLRGHLDTLAILFRPRRILGEFVEG
Ga0207659_1103157613300025926Miscanthus RhizosphereMDNPAAPAESLNVEQLLHLHTLTKDVSKFCQKQLRGYLETMALLFRPRRSLGEAMEGAERETVGGSERTLLELRDLYRRV
Ga0207664_1098787513300025929Agricultural SoilMENPAASAEALNVEQLLHLHTLTKEVAKVCQKQLRGYLETMALLFRPRRMLGDAMEGAERESVGGSERTVAELRELY
Ga0207691_1155069413300025940Miscanthus RhizosphereMDDWFVPAEALKVEQLLQLHAVTKEVSKFFQKQLRGYLDSMALLFRPRRILGEAIEGGERESVGGSERTLSELRELYRRVAVRPFGLRPELSVPLESISTSMQLFEW
Ga0207711_1206355513300025941Switchgrass RhizosphereMDNPAAPAESLNVEQLLHLHTLTKDVSKFCQKQLRGYLETLALLFRPRRILGDAMEGAERESVGGSERTLLELRDLYRRVAVR
Ga0207641_1028202613300026088Switchgrass RhizosphereMDNPVGPAESLNVEQLLHLHTLTKEVSKFCQKQLRGYLETTSLLFRPRRILGEAIEGAEKESVGGSDRTVAELRELYRKVALRPFDLRPE
Ga0207641_1047733323300026088Switchgrass RhizosphereMDDWFVPAEALKVEQLLQLHAVTKEVSKFFQKQLRGYLDSMALLFRPRRILGEAIEGGERESVGGSERTLSELRELYRRVAVRPFGLRPELSVPLESI
Ga0207648_1182499533300026089Miscanthus RhizosphereMDNPAAPAEALNMEQLLHLHTLTKDVSKLCQKQLRGYLDTMALLFRPRRMLGEAVEGAARESAAGSERTIAEFRDLYRS
Ga0209839_1026568223300026294SoilMDNPAAPAEALNVEQLLHLHNLTKDLSKLCQKQLRGYLDTMALLFRPRRMLGDAIEGATA
Ga0209517_1025383023300027854Peatlands SoilMDNPAAPAEGLNVEQLLHLHTLTKDVAKICQKQLRGYLDTMALLFRPRRILGDAMEGAERESVGGSERTLAELRELYRKVALRQFDLRPELSVPLESVSTQMQLYEW
Ga0209068_1025082923300027894WatershedsMDQTAAPASALNIEQLLQLHSLTKDVAKLCQKQLRTYLDTVAMLFRPRRTLGDAIEGSERESIANADRNVAELRELFRGVALRPFDVRPELNLPIESIS
Ga0209068_1061226123300027894WatershedsMDQSAAPAASALNVEQLLQLHSLTKDVAKLCQKQLRTYLDTVAMLFRPRRTLGDAIEGS
Ga0302153_1024612923300028574BogMDQPAASAPALNIEQLLQLHSLTKDVAKLCQKQLRTYLDTAAMLFRPRRTLGDAIEGSERESIPNSERNVTELRELFRSV
Ga0302269_109071113300028766BogMDQPAASAPALNIEQLLQLHSLTKDVAKLCQKQLRTYLDTAAMLFRPRRTLGDAIEGSE
Ga0311346_1120739123300029952BogMDQPAASAPALNIEQLLQLHSLTKDVAKLCQKQLRTYLDTAAMLFRPRRTLGDAIEGSER
Ga0311342_1050697123300029955BogMEQLLQLHSLTKEVAKLCQKQLRTYLDTTAMLFRPRRSLGDAIEGSERESVPHSERNVTELRELYRKVALRPFDLRPELSVPIESISTQIQLQE
Ga0311344_1115364613300030020BogMDQSAAPAPALNIEQLLQLHALTKDVAKHCQKQLRTYLDTTAMLFRPRRILGDAIEGSERESSTNAERNVAELRELFRSVALRPFDLRPELSVPIQSI
Ga0302274_1038477823300030041BogMDQPAASAPALNIEQLLQLHSLTKDVAKLCQKQLRTYLDTAAMLFRPRRTLGDAIEGSERESIPNSERNVTELRELFRSVALRPFDLRP
Ga0311354_1106805233300030618PalsaMDNPAAPAEALNVEQLLHLHTLTKDLSKFCQKQLRGYLDTMALLFRPRRILGDAMEGAERESGVASDRTVAE
Ga0170824_11328010413300031231Forest SoilMDNPAPPAEDLKIEQLLHLHTLTKEVSKFCQKQLRGYLDTMALLFRPRRILGDAM
Ga0302320_1220236013300031524BogMDQSAPAPALNIEQLLQLHALTKDVAKLCQKQLRTYLDTTAMLFRPRRILGDAIEGSERESIANSDRNVAELRELFRSVALRPFDLRPELSVPIESISTQM
Ga0310686_10386950643300031708SoilMDNPAVPAEDLKIEQLLHLHTLTKEVSKFCQKQLRGYLDTMALLFRPRRILGEAME
Ga0306918_1069132013300031744SoilMDKPAAPAEGLNVEQLLHLHTLTKEVAKVCQKQLRGHLDTLALLFRPRRILGDAMEGAEPESGGGSERTVTELRELYRKIALRPFDLRPELSLPLESVSTQMQLYD
Ga0302319_1090132313300031788BogMDNQAPPADALNVEQLLQLHTLTKDVAKVCQKQLRGFLDTIALLFRPRRVLGDAIEGSERESVGSSDRNVAELRELYRKVAPRPFDLR
Ga0310916_1124777013300031942SoilMENPAAPAHALNIEQLLLLHNLTKDVSKFCQKQLRGYLDTMALLFRPRRIL
Ga0306926_1078175233300031954SoilMEDPAAPAHALNIEQLLLLHNLTKDVSKFCQKQLRGYLDTMALLFRPRR
Ga0308176_1179901823300031996SoilMDKAPPAEDLNIDQLLQLHAVTKDVARLCQKQLRTCLDTMALLFRPRRMLGDAVEGAERESAVGSDKNLAELS
Ga0306924_1097179813300032076SoilMEDPAAPAHALNIEQLLLLHNLTKDVSKFCQKQLRGYLDTMALLFRPRRILGEAMEGGEGEFFGGSERTISELR
Ga0311301_1185854413300032160Peatlands SoilMDNPAAPAEALNIDQLLHLHTLTKEVSKLCQKQLRGYLDTLALLFRPRRILGEAIEGSERESAGGSDRAVAELREL
Ga0306920_10349353213300032261SoilMDNPAAAESLNVEQLLHLHTLTKDVAKLCQKQLRAHLETLALLFRPRRILGDAIEGAERESVGGSDRTLAELRELYRKVAQRTFDLRPELTVPLESV
Ga0335080_1131587313300032828SoilMDNPAAPAEGLNVEQLLQLHTLTKEVARACQKQLRGYLDTMALLFRPRRILGEAMEGAER
Ga0335069_1049235633300032893SoilMDNPAAPAEGLNVEQLLQLHTLTKEVARACQKQLRGYLDTMALLFRPRRILGEAMEGAERESVGDSERTLAELRDLYRKVALRPFDLRPELTV
Ga0335073_1102226213300033134SoilMDNQAPPADALNVEQLLQLHTLTKDVAKVCQKQLRGFLDTMALLFRSRRILGDAIEGSERESVGSSDRNVAELRELYRKVAPRPFDLRPELNFPLESIST
Ga0370484_0174627_385_5823300034125Untreated Peat SoilMDNSAAAESLNIEQLLQLHSLTKDVSKFCQKQLRGYLDTLALLFRPRRSLGEAIEGGERESVGGAE


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