NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F094328

Metagenome / Metatranscriptome Family F094328

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F094328
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 122 residues
Representative Sequence MIIPEILDYLEEADLEDWLTAAFIENERQLPLDHLCTNGGFRSASRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGLECQTGELLFTLDTETAEVTFNTDTPAFFRHQERDANVLLS
Number of Associated Samples 88
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 13.21 %
% of genes near scaffold ends (potentially truncated) 48.11 %
% of genes from short scaffolds (< 2000 bps) 92.45 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (50.943 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(35.849 % of family members)
Environment Ontology (ENVO) Unclassified
(30.189 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(69.811 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.92%    β-sheet: 27.45%    Coil/Unstructured: 51.63%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.67
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF03734YkuD 16.04
PF01903CbiX 14.15
PF01979Amidohydro_1 1.89
PF00106adh_short 0.94
PF04134DCC1-like 0.94
PF00291PALP 0.94
PF02954HTH_8 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 16.04
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 16.04
COG3011Predicted thiol-disulfide oxidoreductase YuxK, DCC familyGeneral function prediction only [R] 0.94


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms50.94 %
UnclassifiedrootN/A49.06 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000955|JGI1027J12803_103726490Not Available578Open in IMG/M
3300001593|JGI12635J15846_10661988Not Available603Open in IMG/M
3300002245|JGIcombinedJ26739_101082945Not Available688Open in IMG/M
3300002245|JGIcombinedJ26739_101319588Not Available613Open in IMG/M
3300002245|JGIcombinedJ26739_101593159Not Available550Open in IMG/M
3300002245|JGIcombinedJ26739_101675959Not Available534Open in IMG/M
3300004091|Ga0062387_101778935Not Available502Open in IMG/M
3300005437|Ga0070710_10151988All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1428Open in IMG/M
3300005546|Ga0070696_100865204Not Available748Open in IMG/M
3300005548|Ga0070665_100242425All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1803Open in IMG/M
3300005578|Ga0068854_100640750All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia911Open in IMG/M
3300005610|Ga0070763_10497807All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia697Open in IMG/M
3300005842|Ga0068858_100719065All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia972Open in IMG/M
3300005921|Ga0070766_10462371Not Available839Open in IMG/M
3300005921|Ga0070766_10740544Not Available667Open in IMG/M
3300005994|Ga0066789_10393010Not Available579Open in IMG/M
3300006172|Ga0075018_10618512Not Available578Open in IMG/M
3300006173|Ga0070716_101223391Not Available604Open in IMG/M
3300006175|Ga0070712_100625932Not Available913Open in IMG/M
3300009545|Ga0105237_10944082All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia869Open in IMG/M
3300009553|Ga0105249_11510564All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia744Open in IMG/M
3300010373|Ga0134128_13120335Not Available509Open in IMG/M
3300010375|Ga0105239_10641826All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1212Open in IMG/M
3300010379|Ga0136449_100067515All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia7725Open in IMG/M
3300010396|Ga0134126_11325881Not Available797Open in IMG/M
3300010397|Ga0134124_12685276Not Available541Open in IMG/M
3300010858|Ga0126345_1003620Not Available648Open in IMG/M
3300010865|Ga0126346_1043169Not Available672Open in IMG/M
3300011120|Ga0150983_10991099Not Available566Open in IMG/M
3300011120|Ga0150983_14281065Not Available642Open in IMG/M
3300011120|Ga0150983_14476268Not Available550Open in IMG/M
3300012960|Ga0164301_10876142All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia694Open in IMG/M
3300012989|Ga0164305_10326955All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1145Open in IMG/M
3300015242|Ga0137412_10422633Not Available1029Open in IMG/M
3300017970|Ga0187783_10587425All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia806Open in IMG/M
3300020579|Ga0210407_10043637All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia3339Open in IMG/M
3300020579|Ga0210407_10802887Not Available726Open in IMG/M
3300020579|Ga0210407_10828239Not Available712Open in IMG/M
3300020580|Ga0210403_10404666Not Available1114Open in IMG/M
3300020580|Ga0210403_10494831All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia994Open in IMG/M
3300020583|Ga0210401_10358093All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1321Open in IMG/M
3300021171|Ga0210405_10158264All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1794Open in IMG/M
3300021178|Ga0210408_11416980Not Available523Open in IMG/M
3300021180|Ga0210396_10802957All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia807Open in IMG/M
3300021181|Ga0210388_10382027All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1238Open in IMG/M
3300021181|Ga0210388_10890367All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia768Open in IMG/M
3300021358|Ga0213873_10037309All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus1238Open in IMG/M
3300021361|Ga0213872_10114685All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus1194Open in IMG/M
3300021372|Ga0213877_10000886All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus5816Open in IMG/M
3300021372|Ga0213877_10008110All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus2597Open in IMG/M
3300021401|Ga0210393_10150763All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1868Open in IMG/M
3300021402|Ga0210385_10482999All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia938Open in IMG/M
3300021403|Ga0210397_10258725All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1266Open in IMG/M
3300021405|Ga0210387_10718270All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia885Open in IMG/M
3300021420|Ga0210394_10130399All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2179Open in IMG/M
3300021432|Ga0210384_10321776All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1393Open in IMG/M
3300021432|Ga0210384_10445902All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1166Open in IMG/M
3300021439|Ga0213879_10017609All Organisms → cellular organisms → Bacteria1665Open in IMG/M
3300021474|Ga0210390_10039735All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus3844Open in IMG/M
3300021477|Ga0210398_10444106All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1057Open in IMG/M
3300022498|Ga0242644_1047003Not Available502Open in IMG/M
3300022507|Ga0222729_1038980Not Available627Open in IMG/M
3300022525|Ga0242656_1136271Not Available509Open in IMG/M
3300022529|Ga0242668_1122142Not Available549Open in IMG/M
3300022529|Ga0242668_1123568Not Available547Open in IMG/M
3300022531|Ga0242660_1059251Not Available856Open in IMG/M
3300022532|Ga0242655_10206150Not Available604Open in IMG/M
3300022533|Ga0242662_10279784Not Available550Open in IMG/M
3300022708|Ga0242670_1029168Not Available704Open in IMG/M
3300022709|Ga0222756_1075063Not Available545Open in IMG/M
3300022713|Ga0242677_1018236All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia844Open in IMG/M
3300022720|Ga0242672_1047119All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3713Open in IMG/M
3300022720|Ga0242672_1068545Not Available636Open in IMG/M
3300022724|Ga0242665_10105105All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300022726|Ga0242654_10411238Not Available521Open in IMG/M
3300025898|Ga0207692_10140478All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1373Open in IMG/M
3300025915|Ga0207693_10154482All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1805Open in IMG/M
3300025939|Ga0207665_10609973All Organisms → cellular organisms → Bacteria853Open in IMG/M
3300026291|Ga0209890_10228404Not Available587Open in IMG/M
3300027565|Ga0209219_1060634All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia943Open in IMG/M
3300027660|Ga0209736_1130811Not Available672Open in IMG/M
3300027667|Ga0209009_1002665All Organisms → cellular organisms → Bacteria4550Open in IMG/M
3300027817|Ga0209112_10172650Not Available734Open in IMG/M
3300027855|Ga0209693_10140784All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1192Open in IMG/M
3300027895|Ga0209624_10815128Not Available612Open in IMG/M
3300027908|Ga0209006_10307489Not Available1351Open in IMG/M
3300027908|Ga0209006_10448898All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1080Open in IMG/M
3300027908|Ga0209006_10521131All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia989Open in IMG/M
3300028047|Ga0209526_10145706All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1659Open in IMG/M
3300028759|Ga0302224_10068441All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1343Open in IMG/M
3300028798|Ga0302222_10045582All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1783Open in IMG/M
3300029701|Ga0222748_1130312Not Available515Open in IMG/M
3300029882|Ga0311368_11048679Not Available534Open in IMG/M
3300029943|Ga0311340_10568398All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia998Open in IMG/M
3300030007|Ga0311338_10522813All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1239Open in IMG/M
3300030057|Ga0302176_10017142All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus2727Open in IMG/M
3300030503|Ga0311370_10429678All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1648Open in IMG/M
3300030923|Ga0138296_1602284Not Available696Open in IMG/M
3300030923|Ga0138296_1801560Not Available540Open in IMG/M
3300031057|Ga0170834_109674248Not Available531Open in IMG/M
3300031057|Ga0170834_111637546Not Available652Open in IMG/M
3300031236|Ga0302324_100964797All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1164Open in IMG/M
3300032160|Ga0311301_10682632All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1450Open in IMG/M
3300032756|Ga0315742_13577500Not Available502Open in IMG/M
3300032828|Ga0335080_10775130All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia993Open in IMG/M
3300032955|Ga0335076_11472452Not Available567Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil35.85%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil16.04%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa7.55%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.60%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.77%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.83%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil2.83%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.89%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.89%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.89%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.89%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.89%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.89%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.94%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.94%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.94%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.94%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.94%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010858Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010865Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021358Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3Host-AssociatedOpen in IMG/M
3300021361Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2Host-AssociatedOpen in IMG/M
3300021372Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01EnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021439Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03EnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300022498Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022507Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022525Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022529Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022708Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022709Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022713Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022720Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026291Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027660Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027817Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028759Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1EnvironmentalOpen in IMG/M
3300028798Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2EnvironmentalOpen in IMG/M
3300029701Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030057Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1EnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030923Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032756Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined AssemblyEnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10372649013300000955SoilMIIPEILEYLEDADLEDWLTAAFIENESQLPLDVLCTNGGYRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGPETETRIERQTGELRFTLDTETAEVTFKADPPESLRPEVLDAEVLLS*
JGI12635J15846_1066198813300001593Forest SoilMIIPEILPYLEEADLEDWLTAAFIENVGQLPLDQLCTNGGSRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEEQKNGPEKESKIEPQTGELLFTLDTETAEVTFQTKAPAYFRHQDSDASALLS*
JGIcombinedJ26739_10108294513300002245Forest SoilMIIPEILEYLEEADLEDWLTAAFIENESQLPLDHLCTNGGSRSASRAPDIWMVELTNRTGKLWNGRFNVEFSEEPRNGLGPERQTGELQFTLDTETAEVTFNTDSPALFRHQDDDANILLS*
JGIcombinedJ26739_10131958813300002245Forest SoilMIIPEILEYLEEADLEDWLTAAFIENESQLPLDDLCTNGGFRSATRIPDIWMVELTDRTGRLWNGKFSVEFSEERRNGLEAVPSIEPQTGELLFTLDTETAEVTFKADVPASFRDQDPNS
JGIcombinedJ26739_10159315923300002245Forest SoilMIIPEILPYLEEADLEDWLTAAFIENVGQLPLDQLCTNGGSRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEEQKNGPEKESKIEPQTGELLFTLD
JGIcombinedJ26739_10167595923300002245Forest SoilMPAQAGRTFAPMIIPEILEYLEEADLEDWLTAAFIENESQLPLDXLCTKGGFRCASRIPDIWMVELTDRTGKLWNGRFNVEFSEERRNGLESAPSIERQTGELWFTLD
Ga0062387_10177893523300004091Bog Forest SoilTAAFIENQRQLPLDHLCTNGGHRSASRLPDIWMVELTNRTGKLWNGRFNVEFSEERRNGTEPSIENQTGELLFTLDTETAEVTFDTSASPRHQDRDANILVS*
Ga0070710_1015198823300005437Corn, Switchgrass And Miscanthus RhizosphereMIIPEILDYLEETDLEDWLTAAFIENQRQLPLDHLCTNGGHRSASRTPDIWMVELTNRTGKLWNGRFNVEFSEERRNGTEPSLENQTGELQFTLDTETAEVTFDTSASPRDQDRDANILVS*
Ga0070696_10086520413300005546Corn, Switchgrass And Miscanthus RhizosphereMIIPEILEYLEDADLEDWLTAAFIENESQLPLDVLCTNGGYRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGPETETRIERQTGELRFTLDTETAEVTFKADPPGSLSPEDLDADVLLS*
Ga0070665_10024242533300005548Switchgrass RhizosphereMIIPEILEYLDEADLEDWLTAAFIENESQLPLDDLCTNGGHRSASRIPDIWMVELTNRSGKLWNGRFNVEFSEERKSGLGAEAKVEPHTSELQFTLDTETAEVTFK
Ga0068854_10064075013300005578Corn RhizosphereMRRASAGRTNFFAPMIIPEILEYLDEADLEDWLTAAFIENESQLPLDDLCTNGGHRSASRIPDIWMVELTNRSGKLWNGRFNVEFSEERKSGLGAEAKVEPHTSELQFALDTETAEVTFKTDPPAFFRHQDHDANILLS*
Ga0070763_1049780723300005610SoilADLEDWLTAAFIENERQLPLDHLCTNGGFRSANRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGSDCLTGELLFTLDTETAEVTFNTDTHAFLRHQERDANVLLS*
Ga0068858_10071906513300005842Switchgrass RhizosphereMIIPEILEYLDEADLEDWLTAAFIENESQLPLDDLCTNGGHRSASRIPDIWMVELTNRSGKLWNGRFNVEFSEERKSGLGAEAKVEPHTSELQFTLDTETAEVTFKTDPPAFFRHQDHDANILLS*
Ga0070766_1046237133300005921SoilMIIPEILEYLNDADLEDWLTAAFIENESQLPLDVLCTNGGFRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGLETEPSIERQTGLLRFTLDTETAEVTFKADPSDSLGPEDPDADVLLS*
Ga0070766_1074054413300005921SoilMIIPEILDYLEEADLEDWLTAAFIENERQLPLDHLCTNGGFRSASRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGLECQTGELLFTLDTETAEVTFNTDTPAFFRHQE
Ga0066789_1039301013300005994SoilMIIPEILPYLEEADLEDWLTAAFIENVGQLPLDQLCTNGGSRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEEQKNGPEKGSKIEPQTGELLFTLDTETAEV
Ga0075018_1061851213300006172WatershedsILDYLEEADLEDWLTAAFIENERQLPLDHLCTNGGFRSASRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGSDCLTGELLFTLDTETAEVTFNTDTHSFLRHQERDANVLLS
Ga0070716_10122339113300006173Corn, Switchgrass And Miscanthus RhizosphereMIIPEILEYLNDADLEDWLTAAFIENESQLPLDVLCTNGGFRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGPETEPRIERQTGLLRFTLDTETAEVTFKADPSDSLGPEDPDADVLLS*
Ga0070712_10062593213300006175Corn, Switchgrass And Miscanthus RhizosphereMIIPEILEYLEEADLEDWLTAAFIENESQLPLDDLCTNGGFRSATRIPDIWMVELTDRTGRLWNGKFSVEFSEERRNGLEAVPSIEPQTGELLFTLDTETAEVTFKADVPASFRDQDPNSDVLLS*
Ga0105237_1094408213300009545Corn RhizosphereMRRASAGRTNFFAPMIIPEILEYLDEADLEDWLTAAFIENESQLPLDDLCTNGGHRSASRIPDIWMVELTNRSGKLWNGRFNVEFSEERKNGLGAEAKVEPHTSELQFTLDTETAEVTFKTDPPAFFRHQDHDANILLS*
Ga0105249_1151056413300009553Switchgrass RhizosphereMIIPEILEYLDEADLEDWLTAAFIENESQLPLDDLCTNGGHRSASRIPDIWMVELTNRSGKLWNGRFNVEFSEERKNGLGAEAKVEPHTSELQFTLDTETAEVTFKTDPPAFFRHQDQDANMLLS*
Ga0134128_1312033523300010373Terrestrial SoilMIIPEILEYLDEADLEDWLTAAFIENESQLPLDDLCTNGGHRSASRIPDIWMVELTNRSGKLWNGRFNVEFSEERKSGLGAEAKVEPHTSELQFTLDTETAEVTFKTDPPA
Ga0105239_1064182623300010375Corn RhizosphereMRRASAGRTNFFAPMIIPEILEYLDEADLEDWLTAAFIENESQLPLDDLCTNGGHRSASRIPDIWMVELTNRSGKLWNGRFNVEFSEERKNGLGAEAKVEPHTSELQFTLDTETAEVTFKTDPPAFFRHQDQDANMLLS*
Ga0136449_10006751543300010379Peatlands SoilMIIPEILQYLEEADLEDWLTAAFIENESQLPLDHLCKNGGYRSASRIPDIWMVELTNRTGKLWNGRFNVEFSEEQRNGLETEPRIEPQTGELLFTLDTETAEVTFKTDPAFFRHPDRDSNILLS*
Ga0134126_1132588113300010396Terrestrial SoilVTGRIKVLSPVGINLFSPMIIPEILEYLEDADLEDWLTAAFIENESQLPLDVLCTNGGYRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGPETETRIERQTGELRFTLDTETAEVTFKADPPGSLSPEDLDADVLLS*
Ga0134124_1268527613300010397Terrestrial SoilMIIPEILEYLEDADLEDWLTAAFIENESQLPLDVLCTNGGYRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGPETETRIERQTGELRFTLDTETAEVTFKVDPPGSLSPEDLDADVLLS*
Ga0126345_100362013300010858Boreal Forest SoilTRCPLEKLFAPMIIPEILPYLEEADLEDWLTAAFIENVGQLPLDQLCTNGGSRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEEQKNGPEKESKIEPQTGELLFTLDTETAEVTFQTKAPAYFRHQDSDASALLS*
Ga0126346_104316913300010865Boreal Forest SoilPAGAASRCPLEKLFAPMIIPEILPYLEEADLEDWLTAAFIENVGQLPLDQLCTNGGSRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEEQKNGPEKESKIEPQTGELLFTLDTETAEVTFQTKAPAYFRHQDSDASALLS*
Ga0150983_1099109913300011120Forest SoilMIIPEILDYLEEADLEDWLTAAFIENERQLPLDHLCTNGGFRSASRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGLECQTGELLFTLDTETAEVTFNTDTPAFFRHQERDANVLLS*
Ga0150983_1428106523300011120Forest SoilMIIPEILDYLEETDLEDWLTAAFIENQRQLPLDHLCTNGGHRSASRLPDIWMVELTNRTGKLWNGRFNVEFSEERRNGTEPSIENQTGELQFTLDTETAEVTFDISASPRHQDRDANILVS*
Ga0150983_1447626813300011120Forest SoilPNWDAVPADQPFCTMIIPEILEYLEEADLEDWLTAAFIENERQLPLDELCTNGGFRSASRIPDIWMLELTDRTGKLWNGRFNVEFSEELKSGLETEPKIEQQTGELLFTLDTETAEVTFKTDPPASFRHQDRETDILLS*
Ga0164301_1087614213300012960SoilMKLWLAEMRRASAGRSNFFAPMIIPEILEYLDEADLEDWLTAAFIENESQLPLDDLCTNGGHRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEEQKKGPEKESKIEPQTGELLF
Ga0164305_1032695523300012989SoilMKLWLAEMRRASAGRSNFFAPMIIPEILEYLDEADLEDWLTAAFIENESQLPLDDLCTNGGHRSASRIPDIWMVELTNRSGKLWNGRFNVEFSEERKSGLGAEAKVEPHTSELQ
Ga0137412_1042263313300015242Vadose Zone SoilDLEDWLTAAFIENESQLPLDVLCTNGGYRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGPETETRIERQTGELRFTLDTETAEVTFKADPPESLSPEVLDADVLLS*
Ga0187783_1058742523300017970Tropical PeatlandMFIPEILEHLEEADFEDWLTAAFIEHQEQLPLDHLCTNGSYRSLSSVPDIWMVEVTDRDGKHWTGRFNVEFSQVNRNGNISEPVPERANGEVQFTLDTETATVTFD
Ga0210407_1004363733300020579SoilMIIPEILDYLGEADLEDWLTAAFIENERQLPLDHLCTNGGFRSANRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGSDCLTGELLFTLDTETAEVTFNTDTHAFLRHQERDANVLLS
Ga0210407_1080288723300020579SoilMIIPEILEYLNDADLEDWLTAAFIENESQLPLDVLCTNGGFRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGHETEPRIERQTGLLRFTLDT
Ga0210407_1082823913300020579SoilDWLTAAFIENERQLPLDHLCTNGGFRSASRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGLECQTGELLFTLDTETAEVTFNTDTPAFFRHQERDANVLLSCLNHENIDPDAGSF
Ga0210403_1040466623300020580SoilMIIPEILDYLEEADLEDWLTAAFIENERQLPLDHLCTNGGFRSASRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGLECQTGELLFTLDTETAEVTFNTDTPAFFRHQERDANVLLS
Ga0210403_1049483123300020580SoilMIIPEILDYLEETDLEDWLTAAFIENQRQLPLDHLCTNGGHRSASRTPDIWMVELTNRTGKLWNGRFNVEFSEERRNGTEPGIENQTGELQFTLDTETAEV
Ga0210401_1035809313300020583SoilMIIPEILEYLNDADLEDWLTAAFIENESQLPLDVLCTNGGFRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGLETEPSIERQTGLLRFTLDTETAEVTFK
Ga0210405_1015826423300021171SoilMIIPEILEYLNDADLEDWLTAAFIENESQLPLDVLCTNGGFRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGLETGPSIERQTGLLRFTLDTETAEVTFKADPSDSLGSEDPDADVLLA
Ga0210408_1141698013300021178SoilLEYLEEADLEDWLTAAFIENESQLPLDDLCTKGGFRCASRIPDIWMVELTDRTGKLWNGRFNVEFSEERRNGLESAPSIERQTGELWFTLDTETAEVTFKADLHASFRDQDPDADVLLS
Ga0210396_1080295723300021180SoilRSNERAGDGPHELSAPMIIPEILDYLGEADLEDWLTAAFIENERQLPLDHLCTNGGFRSANRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGSDCLTGELLFTLDTETAEVTFNTDTHAFLRHQERDANVLLS
Ga0210388_1038202713300021181SoilMIIPEILDYLGEADLEDWLTAAFIENERQLPLDHLCTNGGFRSANRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGSDCLTGELLFTLDTETAEV
Ga0210388_1089036713300021181SoilMIIPEILDYLEETDLEDWLTAAFIENQRQLPLDHLCTNGGHRSASRLPDIWMVELTNRTGKLWNGRFNVEFSQERRNGTEPSLENQTGELQFTLDTETAEVTFGTSVSPRHQDRDANILV
Ga0213873_1003730923300021358RhizosphereMFIPEILEHLDEDDLEDWLTAAFIENQRQLPLDHLCTNGNSRSTSSAPDIWMVELTDRSGKHWSGRFNVEFSQEQKFGKEKEPVIERATGEVRFTLDTETAKVTFNGEQDNASPVDGQRDDT
Ga0213872_1011468523300021361RhizosphereMFIPEILEHLDEDDLEDWLTAAFIENQRQLPLDHLCTNGNSRSTSSAPDIWMVELTDRSGKHWSGRFNVEFSQEQKFGKEKEPVIERATGEVRFTLDTETAKVTFNGEQENASPVDGQRDDT
Ga0213877_1000088643300021372Bulk SoilMFIPEILEHLDEDDLEDWLTAAFIENQRQLPLDHLCTNGNSRSTSSAPDIWMVELTDRSGKHWSGRFNVEFSQKQKFGEEKEPVIERATGEVRFTLDTETAKVTFNGEQENASPVDGQRDDT
Ga0213877_1000811043300021372Bulk SoilMLIPEILEHLDEDDLEDWLTAAFIENQRELPLDHLCTNGGYRSSSSVPDIWMVEFTDRSGKRWSGRFNVEFSQEQKFGEEKEPISERATGEVRFTLDIETATVTFNGEQDDASPEAGQLHDT
Ga0210393_1015076323300021401SoilMIIPEILDYLEETDLEDWLTAAFIENQRQLPLDHLCTNGGHRSASRLPDIWMVELTNRTGKLWNGRFNVEFSEERRNGTEPGIENQTGELQFTLDTETAEVTFDTSASPRDQDRDANILV
Ga0210385_1048299913300021402SoilGVRYNGELSSPEPSGLAPGERPNLLFVPMIIPEILDYLEETDLEDWLTAAFIENQRQLPLDHLCTSGGHRSASRIPDIWMVELTNRTGKLWNGRFNVEFSQERRNGTEPSLENQTGELQFTLDTETAEVTFDTSVSPRHQDRDANILVS
Ga0210397_1025872513300021403SoilMIIPEILDYLEETDLEDWLTAAFIENQRQLPLDHLCTSGGHRSASRIPDIWMVELTNRTGKLWNGRFNVEFSQERRNGTEPSLENQTGELQFTLDTETAEVTFDTSVSPRHQDRDANILV
Ga0210387_1071827013300021405SoilMIIPEILDYLEETDLEDWLTAAFIENQRQLPLDHLCTNGGHRSASRLPDIWMVELTNRTGKLWNGRFNVEFSQERRNGTEPSLENQTGELQFTLDTET
Ga0210394_1013039923300021420SoilMIIPEILEYLNDADLEDWLTAAFIENESQLPLDVLCTNGGFRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGLETEPSIERQTGLLRFTLDTETAEVTFKADPSDSLGSEDPDADVLLA
Ga0210384_1032177613300021432SoilMIIPEILDYLEEADLEDWLTAAFIENERQLPLDHLCTNGGFRSASRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGLECLTGELLFTLDTETAE
Ga0210384_1044590223300021432SoilDADLEDWLTAAFIENESQLPLDVLCTNGGFRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGLETEPSIERQTGLLRFTLDTETAEVTFKADPSDSLGSEDPDADVLLA
Ga0213879_1001760923300021439Bulk SoilMPMIIPEILDILEEADLEDWLTAAFIENESRLPLDQLCIDGGYRSPGQPPDIWMVELTDRRGKFWSGKFNVEFSKESRDGLENEGRVESQIGKLFFTLDTETAEVTFKAECADRAQAH
Ga0210390_1003973523300021474SoilMIIPEILDYLEETDLEDWLTAAFIENQRQLPLDHLCTNGGHRSASRLPDIWMVELTNRTGKLWNGRFNVEFSEERRNGTEPGIENQTGELQFTLDTETAEVTFDTSASPRHQDRDASILV
Ga0210398_1044410613300021477SoilMIIPEILDYLEEADLEDWLTAAFIENERQLPLDHLCTNGGFRSASRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGSDCLTGELLFTLDTETAEVTFNTDTHAFLRHQERDANVLLS
Ga0242644_104700313300022498SoilARRWRPHELFAPMIIPEILDYLEEADLEDWLTAAFIENERQLPLDHLCTNGGFRSASRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGLECQTGELLFTLDTETAEVTFNTDTPAFFRHQERDANVLLS
Ga0222729_103898013300022507SoilSNERAGDRPHELSAPMIIPEILDYLGEADLEDWLTAAFIENERQLPLDHLCTNGGFRSANRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGLECQTGELLFTLDTETAEVTFNTDTPAFFRHQERDANVLLS
Ga0242656_113627113300022525SoilMIIPEILDYLEETDLEDWLTAAFIENERQLPLDHLCTNGGFRSANRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGLECQTGELLFTLDTETAEVTFNTDTPAFIRHQERDANVLLS
Ga0242668_112214213300022529SoilMIIPEILDYLEETDLEDWLTAAFIENERQLPLDHLCTNGGFRSANRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGLECQTGELLFTLDTETAEVTFNTDTPAFFRHQERDANVLLS
Ga0242668_112356813300022529SoilMIIPEILEYLDDADLEDWLTAAFIENESQLPLDVLCTNGGFRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGHETEPRIERQTGLLRFTLDTETAEVTFKADPSDSLGPEDLDADVLLS
Ga0242660_105925123300022531SoilAPMIIPEILDYLEETDLEDWLTAAFIENERQLPLDHLCTNGGFRSANRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGSDCLTGELLFTLDTETAEVTFNTDTHAFLRHQERDANVLLS
Ga0242655_1020615013300022532SoilAELECQGRSNNLFPPMIIPEILEYLNDADLEDWLTAAFIENESQIPLDVLCTNGGFRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGPETEPRIERQTGLLRFTLDTETAEVTFKADPSDSLGSEDPDADVLLA
Ga0242662_1027978413300022533SoilMIIPEILDYLKETDLEDWLTAAFIENQRQLPLDHLCTSGGHRSASRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGTEPGIENQTGELQFTLDTETAEVTFDTSASPRHQDRDANIL
Ga0242670_102916823300022708SoilRRWRPHELFAPMIIPEILDYLEEADLEDWLTAAFIENERQLPLDHLCTNGGFRSASRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGLECQTGELLFTLDTETAEVTFNTDTPAFFRHQERDANVLLS
Ga0222756_107506313300022709SoilSNERAGDGPHELSAPMIIPEILDYLGEADLEDWLTAAFIENERQLPLDHLCTNGGFRSANRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGLECQTGELLFTLDTETAEVTFNTDTPAFFRHQERDANVLLS
Ga0242677_101823613300022713SoilNERAGDGPHELSAPMIIPEILDYLGEADLEDWLTAAFIENERQLPLDHLCTNGGFRSANRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGSDCLTGELLFTLDTETAEVTFNTDTHAFLRHQERDANVLLS
Ga0242672_104711923300022720SoilMIIPEILDYLEEADLEDWLTAAFIENERQLPLDHLCTNGGFRSASRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGLEYQTGELLFTLDTETAEVTFNTDTPAFFRHQERDANVLLS
Ga0242672_106854513300022720SoilMIIPEILDYLEETDLEDWLTAAFIENQRQLPLDHLCTNGGHRSASRLPDIWMVELTNRTGKLWNGRFNVEFSEERRNGTEPGIENQTGELQFTLDTETAEVTFDTSASPRHQDRDANILI
Ga0242665_1010510513300022724SoilHTGIGRTNTLHPMIIPEILEYLEEADLEDWLTAAFIENESQLPLDHLCTNGGCRSASRVPDIWMVELTDRTGKLWNGRFNVEFSEERRNGVETEPKVECQTGELLFTLDTETAEVTFKTDTPTLFRHQDDDANILLS
Ga0242654_1041123813300022726SoilMIIPEILDYLEETDLEDWLTAAFIENERQLPLDHLCTNGGFRSANRIPDIWMVELTNRTGKLCNGRFNVEFSEERRNGLGTEPGLECLTGELLFTLDTETAEVTFNTDTPAFFRHQERDANVLLS
Ga0207692_1014047813300025898Corn, Switchgrass And Miscanthus RhizosphereMIIPEILDYLEETDLEDWLTAAFIENQRQLPLDHLCTNGGHRSASRTPDIWMVELTNRTGKLWNGRFNVEFSEERRNGTEPSLENQTGELQFTLDTETAEVTFDTSASPRDQDRDANILV
Ga0207693_1015448223300025915Corn, Switchgrass And Miscanthus RhizosphereMIIPEILEYLNDADLEDWLTAAFIENESQLPLDVLCTNGGFRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGPETETRIERQTGELRFTLDTETAEVTFKVDPPGSLSPEDLDADVLLS
Ga0207665_1060997313300025939Corn, Switchgrass And Miscanthus RhizosphereMIIPEILEYLEDADLEDWLTAAFIENESQLPLDVLCTNGGYRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGPETEPRIERQTGLLRFTLDTETAEVTFKADPSDSLGPEDPDADVLLS
Ga0209890_1022840413300026291SoilMIIPEILPYLEEADLEDWLTAAFIENVGQLPLDQLCTNGGSRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEEQKNGPEKGSKIEPQTGELLFTLDTETAEVTF
Ga0209219_106063413300027565Forest SoilVRYTPDYGIGRPAESVHGNRPDKHFTPMIIPEILEYLEEADLEDWLTAAFIENESQLPLDHLCTNGGCRSASRVPDIWMVELTDRTGKLWNGRFNVEFSEERRNGVETEPKVECHTGELLFTLDTETAEVTFKTDTPTLFRHQDDDANILLS
Ga0209736_113081113300027660Forest SoilMIIPEILPYLEEADLEDWLTAAFIENVGQLPLDQLCTNGGSRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEEQKNGPEKESKIEPQTGELLFTLDTETAEVTFQTKAPAYFRHQDSDASALLS
Ga0209009_100266533300027667Forest SoilMIIPEILEYLEEADLEDWLTAAFIENESQLPLDHLCTNGGCRSASRVPDIWMVELTDRTGKLWNGRFNVEFSEERRNGVETEPKVECQTGELLFTLDTETAEVTFKTDTATLLRHQDDDANILLS
Ga0209112_1017265013300027817Forest SoilMIIPEILDYLEETDLEDWLTAAFIENQKQLPLDHLCSNGGHRSASRLPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGSECLTGELLFTLDTETAEVTFNTDTPAFFRHQERDANVLLS
Ga0209693_1014078413300027855SoilMIIPEILEYLEEADLEDWLTAAFIENESQLPLDHLCTNGGCRSASRVPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGSDCLTGELLFTLDTETAEVTFNTDTHAFLRHQERDANVLLS
Ga0209624_1081512813300027895Forest SoilMIIPEILAYLDQADLEDWLTAAFIENESQLPLDELCTKGGFRSASRIPDIWMVEVTDRTGKLWNGRFNVEFSEELKNGLETEPKIAQQTGELLFTLDTETAEVTFKTDPPASFRHQDQETDILLS
Ga0209006_1030748923300027908Forest SoilMIIPEILEYLEEADLEDWLTAAFIENESQLPLDHLCTNGGSRSAGRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLEAEPKTERQTGELLFTLDTETAEVTFTTDRPSLFGHQDRDDNILLS
Ga0209006_1044889813300027908Forest SoilMIIPEILEYLEEADLEDWLTAAFIENESQLPLDHLCTNGGSRSASRAPDIWMVELTNRTGKLWNGRFNVEFSEEPRNGLGPERQTGELQFTLDTETAEVTFNTDSPALFRHQDDDANILL
Ga0209006_1052113113300027908Forest SoilMIIPEILDYLEETDLEDWLTAAFIENQKQLPLDHLCSNGGHRSASRLPDIWMVELTNRTGKLWNGRFNVEFSEERRIGTEPSIENQTGELQFTLDTETAEVTFDTSA
Ga0209526_1014570613300028047Forest SoilMIIPEILPYLEEADLEDWLTAAFIENVSQLPLDQLCTNGGSRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEEQKNGPEKGSKIEPQTGELLFTLDTETAEVTFQTKVPAYFRHQDSDASALLS
Ga0302224_1006844113300028759PalsaPARKTFCTMIIPEILEYLEEADLEDWLTAAFIENQSQLPLDDLCTNGGSRFVGRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGLETEPRIERQTGELLFTLDTETAEVTFKTDPPPSFRHEDRDADVLLS
Ga0302222_1004558213300028798PalsaMIIPEILEYLEEADLEDWLTAAFIENQSQLPLDDLCTNGGSRFVGRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGLETEPRIERQTGELLFTLDTETAEVTFKTDPPPSFRHEDRDADVLLS
Ga0222748_113031213300029701SoilHRSNERAGDGPHELSAPMIIPEILDYLGEADLEDWLTAAFIENERQLPLDHLCTNGGFRSANRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGSDCLTGELLFTLDTETAEVTFNTDTHAFLRHQERDANVLLS
Ga0311368_1104867913300029882PalsaFIENQSQLPLDDLCTNGGSRFVGRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGLETEPRIERQTGELLFTLDTETAEVTFKTDPPPSFRHEDRDADVLLS
Ga0311340_1056839823300029943PalsaMIIPEILEYLEEADLEDWLTAAFIENERQLPLDELCTNGGFRSASRIPDIWMLELTDRTGKLWNGRFNVEFSEELKSGLETEPKIEQQTGELLFTLDTETAEVTFKTDPPASFRHQDREADILLS
Ga0311338_1052281323300030007PalsaMIIPEILEYLEEADLEDWLTAAFIEHESQLPLDELCTNGGFRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEELKSGLETEPKIEQQTGELLFTLDTETAEVTF
Ga0302176_1001714213300030057PalsaCTMIIPEILEYLEEADLEDWLTAAFIENQSQLPLDDLCTNGGSRFVGRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGLETEPRIERQTGELLFTLDTETAEVTFKTDPPPSFRHEDRDADVLLS
Ga0311370_1042967833300030503PalsaPAPARKTFCTMIIPEILEYLEEADLEDWLTAAFIENQSQLPLDDLCTNGGSRFVGRIPDIWMVELTDRTGKLWNGRFNVEFSEERKNGLETEPRIERQTGELLFTLDTETAEVTFKTDPPPSFRHEDRDADVLLS
Ga0138296_160228423300030923SoilELFAPMIIPEILDYLEEADLEDWLTAAFIENERQLPLDHLCTNGGFRSANRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGLECQTGELLFTLDTETAEVTFNTDTPAFFRHQERDANVLLS
Ga0138296_180156013300030923SoilLGEADLEDWLTAAFIENERQLPLDHLCTNGGFRSANRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGSDCLTGELLFTLDTETAEVTFNTDTHAFLRHQERDANVLLS
Ga0170834_10967424813300031057Forest SoilMIIPEILDYLEETDLEDWLTAAFIENQRQLPLDHLCTSGGYRSASRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGTEPSIENQTCELQFTLDTETAEVTFDTPVSPRHQDRDANILV
Ga0170834_11163754613300031057Forest SoilPMIIPEILDYLEETDLEDWLTAAFIENERQLPLDHLCTNGGFRSASRIPDIWMVELTNRTGKLWNGRFNVEFSEERRNGLGTEPGLECQTGELLFTLDTETAEVTFKTDTPAFIRHQERDANVLLS
Ga0302324_10096479723300031236PalsaMIIPEILEYLEEADLEDWLTAAFIEHESQLPLDELCTNGGFRSASRIPDIWMVELTDRTGKLWNGRFNVEFSEELKSGLETEPKIEQQTGELLFTLDTETAEVTFKTDPSESFRHQDREADILLS
Ga0311301_1068263233300032160Peatlands SoilMIIPEILQYLEEADLEDWLTAAFIENESQLPLDHLCKNGGYRSASRIPDIWMVELTNRTGKLWNGRFNVEFSEEQRNGLETEPRIEPQTGELLFTLDTETAEVTFKTDPAFFRHPDRDSNILLS
Ga0315742_1357750013300032756Forest SoilRIEMPAQAGRAFAPMIIPEILEYLEEADLEDWLTAAFIENESQLPLDDLCTNGGFRSASRIPDIWMVELTNRTGKLWNGKFSVEFSEERRNGLEAAPSIEPQTGELLFTLDTETAEVTFKADVPVSFRDQDPNSDVLLS
Ga0335080_1077513013300032828SoilMLIPEILEHLDEDDLEDWLTAAFIENQRELPLDHLCANGGYRSSSSVPDIWMVEFTDRSGKRWSGRFNVEFSQEQKFGDEKGPISERATGEVRFTLDIETATVTFNGEQDDASPEAGQLHDT
Ga0335076_1147245213300032955SoilMLIPEILEHLDEDDLEDWLTAAFIENQRELPLDHLCTNGGYRSRSSVPDIWMVEFTDRSGKRWSGRFNVEFSQEQKFGDEKEPISERATGEVRFTLDIETAT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.