NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F094327

Metagenome / Metatranscriptome Family F094327

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F094327
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 58 residues
Representative Sequence VEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEES
Number of Associated Samples 90
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 38.68 %
% of genes near scaffold ends (potentially truncated) 41.51 %
% of genes from short scaffolds (< 2000 bps) 89.62 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (66.981 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(13.207 % of family members)
Environment Ontology (ENVO) Unclassified
(25.472 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.170 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.69%    β-sheet: 12.07%    Coil/Unstructured: 67.24%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF00106adh_short 37.74
PF00282Pyridoxal_deC 9.43
PF01370Epimerase 7.55
PF04321RmlD_sub_bind 5.66
PF13191AAA_16 4.72
PF07690MFS_1 4.72
PF00196GerE 4.72
PF07282OrfB_Zn_ribbon 1.89
PF03976PPK2 0.94
PF13460NAD_binding_10 0.94
PF00701DHDPS 0.94
PF02082Rrf2 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG0451Nucleoside-diphosphate-sugar epimeraseCell wall/membrane/envelope biogenesis [M] 11.32
COG0702Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domainsGeneral function prediction only [R] 11.32
COG1086NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsCCell wall/membrane/envelope biogenesis [M] 11.32
COG0076Glutamate or tyrosine decarboxylase or a related PLP-dependent proteinAmino acid transport and metabolism [E] 9.43
COG1091dTDP-4-dehydrorhamnose reductaseCell wall/membrane/envelope biogenesis [M] 5.66
COG1087UDP-glucose 4-epimeraseCell wall/membrane/envelope biogenesis [M] 5.66
COG1088dTDP-D-glucose 4,6-dehydrataseCell wall/membrane/envelope biogenesis [M] 5.66
COG1089GDP-D-mannose dehydrataseCell wall/membrane/envelope biogenesis [M] 5.66
COG1090NAD dependent epimerase/dehydratase family enzymeGeneral function prediction only [R] 5.66
COG03294-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyaseCell wall/membrane/envelope biogenesis [M] 1.89
COG0640DNA-binding transcriptional regulator, ArsR familyTranscription [K] 0.94
COG1414DNA-binding transcriptional regulator, IclR familyTranscription [K] 0.94
COG1725DNA-binding transcriptional regulator YhcF, GntR familyTranscription [K] 0.94
COG1959DNA-binding transcriptional regulator, IscR familyTranscription [K] 0.94
COG2186DNA-binding transcriptional regulator, FadR familyTranscription [K] 0.94
COG2188DNA-binding transcriptional regulator, GntR familyTranscription [K] 0.94
COG2326Polyphosphate kinase 2, PPK2 familyEnergy production and conversion [C] 0.94
COG2378Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domainsTranscription [K] 0.94
COG2524Predicted transcriptional regulator, contains C-terminal CBS domainsTranscription [K] 0.94


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms66.98 %
UnclassifiedrootN/A33.02 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005165|Ga0066869_10037688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia807Open in IMG/M
3300005171|Ga0066677_10500821All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia698Open in IMG/M
3300005177|Ga0066690_10176479All Organisms → cellular organisms → Bacteria1414Open in IMG/M
3300005186|Ga0066676_11186147Not Available500Open in IMG/M
3300005327|Ga0070658_10182774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1765Open in IMG/M
3300005332|Ga0066388_101238963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1279Open in IMG/M
3300005332|Ga0066388_101785282All Organisms → cellular organisms → Bacteria1093Open in IMG/M
3300005338|Ga0068868_100110005All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales2238Open in IMG/M
3300005347|Ga0070668_101498519All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia617Open in IMG/M
3300005356|Ga0070674_101153448All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia686Open in IMG/M
3300005363|Ga0008090_15789051Not Available606Open in IMG/M
3300005365|Ga0070688_100708666All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia780Open in IMG/M
3300005434|Ga0070709_10682932All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300005435|Ga0070714_102382428Not Available514Open in IMG/M
3300005436|Ga0070713_101654078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia621Open in IMG/M
3300005445|Ga0070708_100743239All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales923Open in IMG/M
3300005445|Ga0070708_101900479All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia552Open in IMG/M
3300005450|Ga0066682_10279840Not Available1076Open in IMG/M
3300005553|Ga0066695_10606169All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales656Open in IMG/M
3300005554|Ga0066661_10310807Not Available970Open in IMG/M
3300005764|Ga0066903_101274025All Organisms → cellular organisms → Bacteria1371Open in IMG/M
3300005764|Ga0066903_104297016Not Available762Open in IMG/M
3300006028|Ga0070717_11111930All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300006031|Ga0066651_10805615Not Available510Open in IMG/M
3300006034|Ga0066656_10966922Not Available546Open in IMG/M
3300006046|Ga0066652_100314995All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1395Open in IMG/M
3300006050|Ga0075028_100416708Not Available771Open in IMG/M
3300006172|Ga0075018_10638348All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales570Open in IMG/M
3300006175|Ga0070712_100501587All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300006175|Ga0070712_100509745All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1009Open in IMG/M
3300006755|Ga0079222_10057798All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1840Open in IMG/M
3300006755|Ga0079222_12040192Not Available565Open in IMG/M
3300006800|Ga0066660_11553252All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300006804|Ga0079221_11178313All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300006806|Ga0079220_10924403All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia680Open in IMG/M
3300006904|Ga0075424_100737405All Organisms → cellular organisms → Bacteria1052Open in IMG/M
3300006914|Ga0075436_100945746All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales645Open in IMG/M
3300006914|Ga0075436_101102494Not Available598Open in IMG/M
3300006954|Ga0079219_10612437Not Available801Open in IMG/M
3300009545|Ga0105237_10483279Not Available1245Open in IMG/M
3300009792|Ga0126374_11249546All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia597Open in IMG/M
3300010043|Ga0126380_10062849All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2067Open in IMG/M
3300010048|Ga0126373_11450081Not Available752Open in IMG/M
3300010152|Ga0126318_10598285All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1157Open in IMG/M
3300010358|Ga0126370_11024610All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus755Open in IMG/M
3300010358|Ga0126370_11244839Not Available694Open in IMG/M
3300010360|Ga0126372_10331813All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1354Open in IMG/M
3300010361|Ga0126378_11922298All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria674Open in IMG/M
3300010373|Ga0134128_10765261Not Available1071Open in IMG/M
3300010376|Ga0126381_100457148All Organisms → cellular organisms → Bacteria1792Open in IMG/M
3300010398|Ga0126383_12589750Not Available591Open in IMG/M
3300012929|Ga0137404_11672729Not Available591Open in IMG/M
3300012977|Ga0134087_10502693Not Available610Open in IMG/M
3300013104|Ga0157370_12144231All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300014157|Ga0134078_10352502Not Available648Open in IMG/M
3300014166|Ga0134079_10695456Not Available518Open in IMG/M
3300014969|Ga0157376_13026509Not Available509Open in IMG/M
3300015200|Ga0173480_10509127All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia722Open in IMG/M
3300016294|Ga0182041_10625863Not Available948Open in IMG/M
3300016294|Ga0182041_10630652All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia944Open in IMG/M
3300016294|Ga0182041_11830863Not Available563Open in IMG/M
3300016357|Ga0182032_12000019Not Available508Open in IMG/M
3300016387|Ga0182040_10278063All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1270Open in IMG/M
3300016404|Ga0182037_10530957All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia990Open in IMG/M
3300016422|Ga0182039_10301812All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1327Open in IMG/M
3300019362|Ga0173479_10187261All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia861Open in IMG/M
3300020081|Ga0206354_11692871All Organisms → cellular organisms → Bacteria1375Open in IMG/M
3300021178|Ga0210408_10087639All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2443Open in IMG/M
3300021404|Ga0210389_10394289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1088Open in IMG/M
3300021479|Ga0210410_11218034All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia644Open in IMG/M
3300025907|Ga0207645_10206201All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1294Open in IMG/M
3300025915|Ga0207693_10410128All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1059Open in IMG/M
3300025915|Ga0207693_10915970Not Available672Open in IMG/M
3300025949|Ga0207667_11689421All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia600Open in IMG/M
3300025972|Ga0207668_10253848All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1430Open in IMG/M
3300026911|Ga0209620_1004990All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1031Open in IMG/M
3300027903|Ga0209488_10301574All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1196Open in IMG/M
3300028380|Ga0268265_10602740All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1050Open in IMG/M
3300028885|Ga0307304_10360409All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia651Open in IMG/M
3300031198|Ga0307500_10253833All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia544Open in IMG/M
3300031543|Ga0318516_10027753All Organisms → cellular organisms → Bacteria2961Open in IMG/M
3300031549|Ga0318571_10130127All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria853Open in IMG/M
3300031572|Ga0318515_10017269All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3360Open in IMG/M
3300031713|Ga0318496_10800466Not Available519Open in IMG/M
3300031720|Ga0307469_10307123Not Available1310Open in IMG/M
3300031720|Ga0307469_11655774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia616Open in IMG/M
3300031764|Ga0318535_10249818Not Available794Open in IMG/M
3300031771|Ga0318546_10472471All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia879Open in IMG/M
3300031832|Ga0318499_10051883All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1536Open in IMG/M
3300031890|Ga0306925_10176517All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2302Open in IMG/M
3300031896|Ga0318551_10148204Not Available1279Open in IMG/M
3300031938|Ga0308175_100825669Not Available1016Open in IMG/M
3300031947|Ga0310909_10603807All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria917Open in IMG/M
3300032043|Ga0318556_10245020Not Available935Open in IMG/M
3300032052|Ga0318506_10250114Not Available785Open in IMG/M
3300032770|Ga0335085_10015917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria10889Open in IMG/M
3300032770|Ga0335085_10021515All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia9183Open in IMG/M
3300032770|Ga0335085_10344384Not Available1749Open in IMG/M
3300032770|Ga0335085_11599917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria675Open in IMG/M
3300032805|Ga0335078_10055356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5846Open in IMG/M
3300032805|Ga0335078_10349217All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1965Open in IMG/M
3300032828|Ga0335080_10090757All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3387Open in IMG/M
3300032828|Ga0335080_11087567Not Available810Open in IMG/M
3300032892|Ga0335081_10009265All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia15840Open in IMG/M
3300033475|Ga0310811_10656197All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1032Open in IMG/M
3300034818|Ga0373950_0033371All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia961Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil13.21%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil8.49%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.49%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil8.49%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.49%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.72%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil4.72%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.77%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.83%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.83%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.89%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.89%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.89%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.94%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.94%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.94%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.94%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.94%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.94%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.94%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.94%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.94%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.94%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005165Soil and rhizosphere microbial communities from Laval, Canada - mgHMCEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010152Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026911Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031832Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300034818Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0066869_1003768813300005165SoilRIVLDALDPPAGRIRASGDDTELRFTGWLGLLRVLYQVMGAPAGPQAAAPDTEES*
Ga0066677_1050082123300005171SoilVEVRIALDALDPPAGTIRISGDKSELRFTGWLGLLRVLYQVMGAPAGSQAAAPDTEES*
Ga0066690_1017647923300005177SoilVEVRIALDALDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEET*
Ga0066676_1118614723300005186SoilVEVRIALDALDPPAGAIRVSGDDTELRFTGWLGLLRVLYQVMGAPAGPQAAAPDTEES*
Ga0070658_1018277423300005327Corn RhizosphereVEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAAAPDTEES*
Ga0066388_10123896323300005332Tropical Forest SoilVEVRISLDALDPPAGRVRVVPGSDNAELRFTGWLGLLRVLYQVMGSPGPHDTA*
Ga0066388_10178528223300005332Tropical Forest SoilVEVRIALDALDPPAGRIRVSGDDTELGFTGWLGLLRVLYQVMGAPAGPQAAPDTEES*
Ga0068868_10011000513300005338Miscanthus RhizosphereRSGQDERVEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAAAPDTEES*
Ga0070668_10149851913300005347Switchgrass RhizosphereQDERVEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAAAPDTEES*
Ga0070674_10115344823300005356Miscanthus RhizosphereDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGSQAAAPDTEES*
Ga0008090_1578905113300005363Tropical Rainforest SoilVEVRISLDALDPPAGRVWVVPGSDDAELRFIGWLGLLRVLDQVMGSPAAGPHDTEE*
Ga0070688_10070866623300005365Switchgrass RhizosphereVEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAAAPDTEGS*
Ga0070709_1068293223300005434Corn, Switchgrass And Miscanthus RhizosphereVEVRIALDALDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEEP*
Ga0070714_10238242813300005435Agricultural SoilLDALDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEEP*
Ga0070713_10165407823300005436Corn, Switchgrass And Miscanthus RhizospherePPGHDERVEVRIALDALDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEEP*
Ga0070708_10074323933300005445Corn, Switchgrass And Miscanthus RhizosphereVLDALDPPAGRIRASGDDTELRFTGWLGLLRVLYQVMGAPAGPQAAAPDTEES*
Ga0070708_10190047913300005445Corn, Switchgrass And Miscanthus RhizosphereLDALDPPAGTIRVSGDDPELRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEES*
Ga0066682_1027984013300005450SoilVEVRIALDALDPPAGTIRVSGDDPELRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEE*
Ga0066695_1060616923300005553SoilVEVRIALDAFDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEES*
Ga0066661_1031080723300005554SoilVEVRIALDALDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSPAGPRAAAPDTEES*
Ga0066903_10127402523300005764Tropical Forest SoilVEVRIALDALDPPAGTIRVSGDDTELRFAGWLGLLRVLYQVTGAPAGPQAAAPDTEEP*
Ga0066903_10429701613300005764Tropical Forest SoilVEVRISLDTLDPPAGRVRVMPGSDDAEMYFTGWLGLLRVLYQVTGSPAGSHDTEES*
Ga0070717_1111193023300006028Corn, Switchgrass And Miscanthus RhizosphereVEVRIALDALDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSPARPQAAAPDTEES*
Ga0066651_1080561513300006031SoilDERVEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAAAPDTEES*
Ga0066656_1096692213300006034SoilVEVRIALDALDPPAGTIRISGDKSELRFTGWLGLLRVLYQVMGAPAGSQAAASDTEES*
Ga0066652_10031499543300006046SoilRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAAAPDREES*
Ga0075028_10041670823300006050WatershedsVEVRIALDALDPPAGTIRVSGDDTVLRFTGWLGLLRVLYQVMGSPAGPQATAPDTEES*
Ga0075018_1063834823300006172WatershedsVEVRIALDALDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSSGGGPLDTEEQ*
Ga0070712_10050158723300006175Corn, Switchgrass And Miscanthus RhizosphereVLDALDPPAGIIRVSGDDPELRFTGWLGLLRVLYQVMGSPAGPQATAPDTEES*
Ga0070712_10050974513300006175Corn, Switchgrass And Miscanthus RhizosphereERVEVRIALDALDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEEP
Ga0079222_1005779823300006755Agricultural SoilVEVRISLDALDPPAGRVRVVPGSDDAELRFTGWLGLLRVLDQVMGSPAAGPHDAEDDEPRRAPSPP*
Ga0079222_1204019213300006755Agricultural SoilVEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAAAPDTE
Ga0066660_1155325213300006800SoilPPRHDERVEVRIALDALDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEET*
Ga0079221_1117831333300006804Agricultural SoilVEVRISLDALDPPAGRVRVVPGSDDAELRFTGWLGLLRVLDQVMGSPAAGPHDAEDDEPR
Ga0079220_1092440323300006806Agricultural SoilVEVRIALDALDPPAGTIRVSGDDPELRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEES*
Ga0075424_10073740523300006904Populus RhizosphereMLRAGGLGTMRVEVRIALDALDPPAGTIRVSGDDPELRFTGWLGLLRVLYQVMGHPPDRRPLPPDTEES*
Ga0075436_10094574613300006914Populus RhizosphereVEVRIALDALDPPAGHIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAAAPDTE
Ga0075436_10110249423300006914Populus RhizosphereVEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAAALDTEES*
Ga0079219_1061243723300006954Agricultural SoilVEVRISLDALDPPAGQVRVVPGSDDAELRFTGWLGLLRVLDQVMGSPAAGPHDKEE*
Ga0105237_1048327913300009545Corn RhizosphereVEVRIALDALDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSPAGPQAAASDIDEPGTTEKVVYCASAR
Ga0126374_1124954623300009792Tropical Forest SoilVEVRISLDTLDPPAGRVRVMPGSDDAEMYFTGWLGLLRVLYQVMGAPVGPRAAAPDTEES
Ga0126380_1006284923300010043Tropical Forest SoilMLRGRRPGHDERVEVRISLDALDPPAGRVRVVPGSDDAELRFTGWLGLLRVLYQVMGSPAAGPHDTEE*
Ga0126373_1145008123300010048Tropical Forest SoilVEVRISLDTLDPPAGRVRVMPGSDDAEMYFTGWLGLLRVLYQVTGSPAAPHDTEES*
Ga0126318_1059828513300010152SoilRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPRAAAPDTEES*
Ga0126370_1102461023300010358Tropical Forest SoilMLRGRRPGHDERVEVRISLDALDPPAGRVRVVPGSDDAELRFTGWLGLLRVLYQVTGAPAASDTEES*
Ga0126370_1124483923300010358Tropical Forest SoilVEIRIALDALDPPAGRIRVSGDDTELGFTGWLGLLRVLYQVTGSPAAPHDTEES*
Ga0126372_1033181323300010360Tropical Forest SoilMLRGRRPGHDERVEVRISLDALDPPAGRVRVVLGSEDAELRFIGWLGLLRVLDQVMGSPAAGPHDTEE*
Ga0126378_1192229823300010361Tropical Forest SoilVEVRISLDALDPPAGRVRVIPGSDDAELRFTGWLGLLRVLDQVMGSPAAGPHDMA*
Ga0134128_1076526123300010373Terrestrial SoilVEVRIALDALDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSPAGPQAAAPETEES*
Ga0126381_10045714823300010376Tropical Forest SoilMLRGRRPGHDERVEVRISLDALDPPAGRVRVVPGSDDAELRFTGWLGLLRVLDQVMGSPAAGPHDTA*
Ga0126383_1258975023300010398Tropical Forest SoilMLRGRRPGHDERVEVRISLDALDPPAGRVRVVPGSDDAELRFTGWLGLLRVLYQVMGSPAAGPHDTA*
Ga0137404_1167272923300012929Vadose Zone SoilALDALDPPAGTIRVSGDDIAHRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEES*
Ga0134087_1050269323300012977Grasslands SoilVEVRIALDALDPPAGRIRASGDDTELRFTGWLGLLRVLYQVMGAPAGPQAAAPDREES*
Ga0157370_1214423123300013104Corn RhizosphereRSGQDERVEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAAGPDTEES*
Ga0134078_1035250213300014157Grasslands SoilLEVRVVLDALDPPAGRIQASGDDTELRFTGWLGLLRVLYQVMGAPAGAPDTEES*
Ga0134079_1069545623300014166Grasslands SoilVEVRIALDALDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSPAGPQAAAPD
Ga0157376_1302650913300014969Miscanthus RhizosphereVEVRIALDALDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEES*
Ga0173480_1050912713300015200SoilVEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAAARDREES*
Ga0182041_1062586333300016294SoilMLRGQRPGHDERVEVRISLDALDPPAGRVRVVPGSDDAELRFTGWLGLLRVLYQVMGSPAAGPHDTA
Ga0182041_1063065213300016294SoilVAGRGSGHDERVEVRISLDTLDPPVGRVRVIPGSDDAELRFTGWLGLLRVLYQVMGSPGAGPHDTEE
Ga0182041_1183086313300016294SoilPGHDERVEVRISLDALDPPVGRVRVLPGSDDADMCFTGWLGLLQVLYQVTGSSAAGSHDTEQS
Ga0182032_1200001923300016357SoilERVEVRISLDTLDPPVGRVRVIPGSDDAELRFTGWLGLLRVLYQVMGSPGAGPHDTEE
Ga0182040_1027806333300016387SoilMLRGRRPGHDERVEVRISLDALDPPAGRVRVVPGSDDAELRFTGWLGLLRVLYQVMGSPAAGPHDPA
Ga0182037_1053095713300016404SoilPGHDERVEVRISLDTLDPPVGRVRVIPGSDDAELRFTGWLGLLRVLYQVMGSPGAGPHDTEE
Ga0182039_1030181233300016422SoilVEVRISLDTLDPPVGRVRVIPGSDDAELRFTGWLGLLRVLYQVMSSPGA
Ga0173479_1018726123300019362SoilVEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAAARDREES
Ga0206354_1169287123300020081Corn, Switchgrass And Miscanthus RhizosphereVEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAAAPDTEES
Ga0210408_1008763913300021178SoilVEVRISLDALDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSPAGPQAAAPD
Ga0210389_1039428913300021404SoilSPGHDERVEVRIALDALDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEES
Ga0210410_1121803413300021479SoilDERVEVRISLDALDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEE
Ga0207645_1020620113300025907Miscanthus RhizosphereVEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAAGPDTEES
Ga0207693_1041012823300025915Corn, Switchgrass And Miscanthus RhizosphereRSGQDERVEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAAAPDTEES
Ga0207693_1091597023300025915Corn, Switchgrass And Miscanthus RhizosphereVEVRIVLDALDPPAGIIRVSGDDPELRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEES
Ga0207667_1168942123300025949Corn RhizosphereALDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEEP
Ga0207668_1025384833300025972Switchgrass RhizosphereVEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPRAAAPDTEES
Ga0209620_100499023300026911Forest SoilVEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEES
Ga0209488_1030157413300027903Vadose Zone SoilGHDERVEVRIALDALDPPAGTIRVSGDDIAHRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEES
Ga0268265_1060274013300028380Switchgrass RhizosphereGQDERVEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAAAPDTEES
Ga0307304_1036040913300028885SoilEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGTPAGPQAAAPDTEES
Ga0307500_1025383313300031198SoilRIALDALDPPAGHIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAAAADTEES
Ga0318516_1002775343300031543SoilVEVRISLDALDPPVGRVRVLPGSDDADMCFTGWLGLLQVLYQVTGSSAAGSHDTEQS
Ga0318571_1013012723300031549SoilVEVRISLDTLDPPVGRVRVIPGSDDAELRFTGWLGLLRVLYQVMGSPGAGPHDTEE
Ga0318515_1001726943300031572SoilVEVRISLDALDPPAGRVRVVPGSDDAELRFTGWLGLLRVLYQVMGSPAAGPHDPA
Ga0318496_1080046613300031713SoilMLRGQRPGHDERVEVRISLDALDPPAGRVRVIPGSDDGELRFTGWLGLLRVLDQVMGSPAAGPHDTA
Ga0307469_1030712323300031720Hardwood Forest SoilVEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAA
Ga0307469_1165577413300031720Hardwood Forest SoilQDERVEVRIALDALDPPAGRIRVSGDDSELRFTGWLGLLRVLYQVMGAPAGPQAAAPDTEES
Ga0318535_1024981813300031764SoilLDALDPPVGRVRVLPGSDDADMCFTGWLGLLQVLYQVTGSSAAGSHDTEQS
Ga0318546_1047247123300031771SoilADVAGRGSGHDERVEVRISLDTLDPPVGRVRVIPGSDDAELRFTGWLGLLRVLYQVMGSPGAGPHDTEE
Ga0318499_1005188313300031832SoilHDERVEVRISLDTLDPPVGRVRVIPGSDDAELRFTGWLGLLRVLYQVMGSPGAGPHDTEE
Ga0306925_1017651733300031890SoilVEVRISLDALDPPAGRVRVVPGSDDAELRFTGWLGLLRVLDQVMGSPAAGPHDTA
Ga0318551_1014820433300031896SoilVEVRISLDTLDPPVGRVRVIPGSDDAELRFTGWLGLLRVLYQVMGSPGAGPHDRE
Ga0308175_10082566913300031938SoilVEVRIALDALDPPAGRIRVSGDDSELGFTGWLGLLRVLYQVMGAPAGPQAAAPDT
Ga0310909_1060380733300031947SoilVEVRISLDTLDPPVGRVRVIPGSDAAELRFTGWLGLLRVLYQVMGSPGAGPHDTEE
Ga0318556_1024502033300032043SoilSLDALDPPVGRVRVLPGSDDADMCFTGWLGLLQVLYQVTGSSAAGSHDTEQS
Ga0318506_1025011423300032052SoilLDPPVGRVRVLPGSDDADMCFTGWLGLLQVLYQVTGSSAAGSHDTEQS
Ga0335085_1001591773300032770SoilMLRGRRPGHDERVEVRISLDALDPPAGRVRVVPGSDDAELRFTGWLGLLRVLYQVMGSPAAGPHDTEE
Ga0335085_1002151553300032770SoilVEVRISLDALDPPAGRVRVVPGSDDAELRFTGWLGLLRVLYQVMGSPAAGPHDTEE
Ga0335085_1034438423300032770SoilVEVRISLDALDPPAGRVRVVPGSDDAELRFTGWLGLLRVLDQVMGSPAAGPQDTEE
Ga0335085_1159991723300032770SoilVEVRITLDALDPPAGRVRVMPGSDDAGLRFTGWLGLLRVLYQVTGSPAAGPHDTEEQ
Ga0335078_1005535633300032805SoilVLDDVDPPAGRIRASGDDTELRFTGWLGLLRVLYQVMGVPAGPQAAAPDTEES
Ga0335078_1034921723300032805SoilVEVRISLDALDPPAGRVRVVPGSDDAELRFTGWLGLLRVLDQVMGSPAAGPHDTEE
Ga0335080_1009075713300032828SoilDPPAGRVRVVPGSDDAELRFTGWLGLLRVLDQVMGSPAAGPHDTEE
Ga0335080_1108756723300032828SoilVEVRIALDALDPPAGTIRVSEDDIALRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEES
Ga0335081_10009265133300032892SoilVEVRISLDALDPPAGRVRVVPGSDDAELRFTGWLGLLRVLDQVMGSSAAGPHDTEE
Ga0310811_1065619723300033475SoilVEVRIALDALDPPAGRIRVSEDDSELRFTGWLGLLRVLYQVMGAPAGPRAAAPDTEES
Ga0373950_0033371_43_2193300034818Rhizosphere SoilVEVRIALDALDPPAGTIRVSGDDIALRFTGWLGLLRVLYQVMGSPAGPQAAAPDTEES


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.