Metagenome / Metatranscriptome Family F094324

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094324
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	104 residues
Representative Sequence	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPAIASSSIIAVRGEDSVKVISNDGHFGMELQPGDWRLIFAVKEFYGIPTEKKVQVLEGKHINLGEIRLTQ
Number of Associated Samples	75
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.87 %
% of genes near scaffold ends (potentially truncated)	22.64 %
% of genes from short scaffolds (< 2000 bps)	77.36 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil (16.981 % of family members)
Environment Ontology (ENVO)	Unclassified (24.528 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.943 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 20.45% β-sheet: 37.88% Coil/Unstructured: 41.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF16653	Sacchrp_dh_C	19.81
PF03435	Sacchrp_dh_NADP	19.81
PF10043	DUF2279	2.83
PF02880	PGM_PMM_III	1.89
PF03629	SASA	1.89
PF13414	TPR_11	0.94
PF01878	EVE	0.94
PF00873	ACR_tran	0.94
PF02446	Glyco_hydro_77	0.94
PF02754	CCG	0.94
PF00528	BPD_transp_1	0.94
PF02469	Fasciclin	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	1.89
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	1.89
COG0247	Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF	Energy production and conversion [C]	0.94
COG1640	4-alpha-glucanotransferase	Carbohydrate transport and metabolism [G]	0.94
COG1673	Predicted RNA-binding protein, contains PUA-like EVE domain	General function prediction only [R]	0.94
COG2048	Heterodisulfide reductase, subunit B	Energy production and conversion [C]	0.94
COG2335	Uncaracterized surface protein containing fasciclin (FAS1) repeats	General function prediction only [R]	0.94
COG2947	Predicted RNA-binding protein, contains EVE domain	General function prediction only [R]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	99.06 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	99.06 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	99.06 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	92.45 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	92.45 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	92.45 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Chitinophagaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae	63.21 %
Niastella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella	3.77 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chitinophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	63.21 %
Niastella koreensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella → Niastella koreensis	3.77 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000313\|WSSedB1CaDRAFT_10005846	All Organisms → cellular organisms → Bacteria	3478	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101873634	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella → Niastella koreensis	47177	Open in IMG/M
3300000559\|F14TC_107669101	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella → Niastella koreensis	519	Open in IMG/M
3300001213\|JGIcombinedJ13530_108821209	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	928	Open in IMG/M
3300001409\|JGI20185J14861_1009698	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella → Niastella koreensis	614	Open in IMG/M
3300004091\|Ga0062387_101144041	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	606	Open in IMG/M
3300005165\|Ga0066869_10014559	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1120	Open in IMG/M
3300005367\|Ga0070667_100810502	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	869	Open in IMG/M
3300005542\|Ga0070732_10700726	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	616	Open in IMG/M
3300005841\|Ga0068863_101355170	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	719	Open in IMG/M
3300005944\|Ga0066788_10001544	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	4412	Open in IMG/M
3300005950\|Ga0066787_10000008	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	30783	Open in IMG/M
3300005993\|Ga0080027_10000425	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	18281	Open in IMG/M
3300005993\|Ga0080027_10002055	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	7871	Open in IMG/M
3300005994\|Ga0066789_10009998	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	4195	Open in IMG/M
3300005994\|Ga0066789_10191849	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	862	Open in IMG/M
3300005995\|Ga0066790_10001057	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	11351	Open in IMG/M
3300005995\|Ga0066790_10130524	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1077	Open in IMG/M
3300006047\|Ga0075024_100372104	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	719	Open in IMG/M
3300006050\|Ga0075028_100016636	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	3165	Open in IMG/M
3300006057\|Ga0075026_100582331	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	655	Open in IMG/M
3300006172\|Ga0075018_10660177	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella → Niastella koreensis	562	Open in IMG/M
3300006173\|Ga0070716_100996203	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	662	Open in IMG/M
3300006176\|Ga0070765_100164425	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1991	Open in IMG/M
3300006237\|Ga0097621_100014491	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	5900	Open in IMG/M
3300006642\|Ga0075521_10000387	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	12522	Open in IMG/M
3300006642\|Ga0075521_10038908	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2036	Open in IMG/M
3300010147\|Ga0126319_1344824	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	777	Open in IMG/M
3300010154\|Ga0127503_10054369	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	576	Open in IMG/M
3300010154\|Ga0127503_10103131	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	508	Open in IMG/M
3300010154\|Ga0127503_11124435	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	738	Open in IMG/M
3300010865\|Ga0126346_1398112	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	585	Open in IMG/M
3300011120\|Ga0150983_16594228	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	708	Open in IMG/M
3300012212\|Ga0150985_113781343	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1024	Open in IMG/M
3300012212\|Ga0150985_122134764	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	904	Open in IMG/M
3300012469\|Ga0150984_104771350	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1966	Open in IMG/M
3300012469\|Ga0150984_115409103	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1020	Open in IMG/M
3300012924\|Ga0137413_10246258	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1225	Open in IMG/M
3300013104\|Ga0157370_10754943	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	886	Open in IMG/M
3300013105\|Ga0157369_10086483	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	3348	Open in IMG/M
3300014968\|Ga0157379_11827630	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	597	Open in IMG/M
3300014969\|Ga0157376_10014040	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5995	Open in IMG/M
3300014969\|Ga0157376_10246578	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1666	Open in IMG/M
3300014969\|Ga0157376_11657613	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	674	Open in IMG/M
3300015242\|Ga0137412_10398210	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1066	Open in IMG/M
3300017792\|Ga0163161_10860592	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	765	Open in IMG/M
3300018433\|Ga0066667_10922509	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	752	Open in IMG/M
3300020021\|Ga0193726_1009496	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	5319	Open in IMG/M
3300020034\|Ga0193753_10000739	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	30637	Open in IMG/M
3300020062\|Ga0193724_1008391	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	2205	Open in IMG/M
3300020581\|Ga0210399_10188470	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1714	Open in IMG/M
3300021086\|Ga0179596_10417175	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	678	Open in IMG/M
3300021403\|Ga0210397_10128287	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1749	Open in IMG/M
3300021403\|Ga0210397_10315716	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1151	Open in IMG/M
3300021403\|Ga0210397_10459139	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	960	Open in IMG/M
3300021403\|Ga0210397_10846114	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	707	Open in IMG/M
3300021405\|Ga0210387_10341907	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1321	Open in IMG/M
3300021420\|Ga0210394_10218694	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1663	Open in IMG/M
3300021420\|Ga0210394_10472586	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1103	Open in IMG/M
3300021432\|Ga0210384_10030433	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5053	Open in IMG/M
3300021478\|Ga0210402_10036534	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4266	Open in IMG/M
3300021478\|Ga0210402_10300163	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1487	Open in IMG/M
3300022530\|Ga0242658_1222442	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	523	Open in IMG/M
3300022718\|Ga0242675_1114209	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	534	Open in IMG/M
3300025427\|Ga0208077_1007961	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1518	Open in IMG/M
3300025464\|Ga0208076_1036612	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	858	Open in IMG/M
3300025505\|Ga0207929_1013000	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1572	Open in IMG/M
3300025625\|Ga0208219_1107986	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	629	Open in IMG/M
3300025878\|Ga0209584_10039116	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1658	Open in IMG/M
3300025878\|Ga0209584_10172924	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	819	Open in IMG/M
3300025986\|Ga0207658_10729821	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	896	Open in IMG/M
3300026214\|Ga0209838_1000013	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	19906	Open in IMG/M
3300026215\|Ga0209849_1002750	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2923	Open in IMG/M
3300026281\|Ga0209863_10001282	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	9992	Open in IMG/M
3300026281\|Ga0209863_10002168	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	7196	Open in IMG/M
3300026291\|Ga0209890_10065202	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1315	Open in IMG/M
3300026294\|Ga0209839_10000124	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	35733	Open in IMG/M
3300026294\|Ga0209839_10082498	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1115	Open in IMG/M
3300027684\|Ga0209626_1151213	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	613	Open in IMG/M
3300027855\|Ga0209693_10390027	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	673	Open in IMG/M
3300027894\|Ga0209068_10091530	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1595	Open in IMG/M
3300027894\|Ga0209068_10218183	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1053	Open in IMG/M
3300027908\|Ga0209006_11523575	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	505	Open in IMG/M
3300027915\|Ga0209069_10357933	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	790	Open in IMG/M
3300030841\|Ga0075384_10018436	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	750	Open in IMG/M
3300030841\|Ga0075384_11153578	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	575	Open in IMG/M
3300031057\|Ga0170834_103610579	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1170	Open in IMG/M
3300031057\|Ga0170834_103893094	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	756	Open in IMG/M
3300031057\|Ga0170834_104938912	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	646	Open in IMG/M
3300031057\|Ga0170834_105738184	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	534	Open in IMG/M
3300031057\|Ga0170834_110362895	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	599	Open in IMG/M
3300031057\|Ga0170834_114037153	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	580	Open in IMG/M
3300031122\|Ga0170822_17069185	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	513	Open in IMG/M
3300031128\|Ga0170823_10719346	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	608	Open in IMG/M
3300031128\|Ga0170823_13635441	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	935	Open in IMG/M
3300031231\|Ga0170824_100449598	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	503	Open in IMG/M
3300031231\|Ga0170824_100763159	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	565	Open in IMG/M
3300031231\|Ga0170824_112908694	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	536	Open in IMG/M
3300031231\|Ga0170824_119764872	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	599	Open in IMG/M
3300031231\|Ga0170824_126433921	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	537	Open in IMG/M
3300031446\|Ga0170820_14566372	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1628	Open in IMG/M
3300031469\|Ga0170819_12860017	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	643	Open in IMG/M
3300031469\|Ga0170819_17083963	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	587	Open in IMG/M
3300031474\|Ga0170818_102333472	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	630	Open in IMG/M
3300032515\|Ga0348332_10499151	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	631	Open in IMG/M
3300032954\|Ga0335083_10352739	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1273	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.85%
Host-Associated	Host-Associated	14.15%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.64%
Plants	Host-Associated → Plants	14.15%
Aquatic	Environmental → Aquatic	13.21%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.43%
Sediment	Environmental → Aquatic → Sediment	6.60%
Freshwater	Environmental → Aquatic → Freshwater	4.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.77%
Marine	Environmental → Aquatic → Marine	1.89%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.94%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.60%
Loam	Environmental → Terrestrial → Soil → Loam	6.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.66%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.77%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.13%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	14.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.49%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	8.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.72%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.77%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	16.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.15%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	10.38%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	8.49%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.60%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	3.77%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.83%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.89%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000313	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B1 Cattail	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001409	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300030841	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedB1CaDRAFT_100058462	3300000313	Wetland	MRKGILELGFIILMVICIHAERLLHKGSITGRVSPARDASSIIAVRGNDSVKVVSNDGHFGMELQPGNWKLIFATNKYGVLPTERRVRVLEGQHIILGEIRLSR*
INPhiseqgaiiFebDRAFT_10187363431	3300000364	Soil	MRRGMLELCLIIIVVIGIHAERLMHNGSIEGRISPAKASQSVIAVRGNDSVKVTSNDGHFGMELQPGEWNLIFAVNEYNGFHGMKTVKIQEGKHVNLGEIKLSQ*
F14TC_1076691011	3300000559	Soil	MRSRMLELCLIIIVVIGIHAERLMHNGSIEGRISPAKASQSIIAVRGSDSVKVTSNDGHFGMELQPGDWKLIFAINEYNGVHAVKTVQIQEGKRVNLGEIKLTQ*
JGIcombinedJ13530_1088212092	3300001213	Wetland	MRRGILELGLVIAVIIGFHTTRLLHSGSVVGRISPVKATPSVIAVRGNDSVRVVSNNGHFGMELQPGNWKLIFTADEYNSAPFEKKVQVFEGRRVNLGEIRLTQ*
JGI20185J14861_10096982	3300001409	Arctic Peat Soil	MRRGFLELCLIIVVVIGIHAERLFHNGSIEGRISPALASPSVIAVRGNDSVKVNSNNGHFGMELQPGDWKLIFAVKELNGLPTEKKVQVFDGQRINL
Ga0062387_1011440411	3300004091	Bog Forest Soil	MEMRRGILELCLIIAVVIGIHAERLLHNGSVEGRIFPAIASPSVIAVRGNDSVKVISNDGHFGMELQPGDWKLIFAIKELNGLPIEKKVQVLEGQRINLGEIRLNQ*
Ga0066869_100145591	3300005165	Soil	MRRGMLELCLLIVVVIGIHAERILHNGSIEGRISPANSSSSVIAVRGSDSLKVTSNDGHFGMELQPGDWKLIFAVKDFNSVPTEKKIQVLEGQRINLGEIRLAQ*
Ga0070667_1008105021	3300005367	Switchgrass Rhizosphere	FFVNRPFKRYNQVQMRRGMLELCLLIVVVIGIHAERILHNGSIEGRISPANTSSSVIAVRGSDSLKVTSNDGHFGMELQPGDWKLIFAVKEFNSVPTEKKIQVLEGQRINLGEIRLAQ*
Ga0070732_107007261	3300005542	Surface Soil	MRRGILELCLIIVVVIGIHAERLLHNGTIEGRVSPAMASSSIIAVRGEDSVKVISNDGHFGMELQPGDWRLIFAVNELYGIPTEKKVQVLEGKHINLGEIRLAQ*
Ga0068863_1013551702	3300005841	Switchgrass Rhizosphere	MLELCLIIIVVIGIHAERLMHNGSIEGRISPVKASQSIIAVRGKDSVKVTSNDGHFGMELQPGDWKLIFAINEYNGVHAVKTVQVREGKRVNLGEIRLTQ*
Ga0066788_100015443	3300005944	Soil	MRRGILELCLIIVVVIGIHAERLLHNGSIEGKVYPAIASPSIIAIRGNDSVRVISNDGHFGMDLQPGDWRLIFAIKEFNGISTEKKVQVSEGKRTNLGEIRLTQ*
Ga0066787_100000089	3300005950	Soil	MRRGMLELCLIIVVVIGIHAERLLHNGSIEGRISPAKPSPSIIAVRGNDSVRAVSNDGHFGIDLQPGDWKLIIAAKELNGISTEKKVQVLEGKRVNLGEIRLAQ*
Ga0080027_1000042514	3300005993	Prmafrost Soil	MRRGFLELSLIIIAVIGIHAERFLHNGSIVGRIFSSSPSPTVIAVRGKDSVRVISNDGRFGMELQPGAWKLIFASNNINGAPTEKNVHVFEGKRINLGDIRLTE*
Ga0080027_100020554	3300005993	Prmafrost Soil	MRRGLLELCLIIVVVIGIHAERLLHNGSIVGRISPAEITSSITAVRGSDSVRVTSNDGHFGMDLQPGDWKLIFAIKEYNSIPTEKKVQVLEGQRVNLGEIRLTQ*
Ga0066789_100099983	3300005994	Soil	MQRGFLELCLIIVVVIGIHAERILHSGSIVGKISPDNPASSVIAVRGSDSVKVLANDGHFGMELQPGDWKLIIALKEYNSLPTEKRIQVQEGQRVNLGEIRLTP*
Ga0066789_101918492	3300005994	Soil	LELCLIIVVVIGIHAERLLHNGSIEGRISPAKPSPSIIAVRGNDSVRAVSNDGHFGIDLQPGDWKLIIAAKELNGISTEKKVQVLEGKRVNLGEIRLAQ*
Ga0066790_100010575	3300005995	Soil	MRRGLLELCLIIVVVIGIHAERLLHNGSIVGRISPAEITSSITAVRGSDSVRVTSNDGHFGMDLQPGDWKLIFTIKEYNSIPTEKKVQVLEGQRVNLGEIRLTQ*
Ga0066790_101305242	3300005995	Soil	MKMRRGLLELCLVIAVVIGIHAERLLHNGSIEGRISPALASPSVIAVRGNDSVKVISNNGHFGMELQPGDWKLIFAVKELNGLPIEKKVQVFEGQRINLGEIRLSQ*
Ga0075024_1003721042	3300006047	Watersheds	MLELCLIIIIVIGIHAERLFHQATIEGVISSSSPNPSVVAIKGNDSIKVVSNNGHFGMELQPGDWKLIFASQEINGIQTEKNVQVLEGQRLNMGVIHLAQ*
Ga0075028_1000166363	3300006050	Watersheds	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPAAASSSIIAVRGDDSVKVISNDGHFGMELQPGDWRLIFAVKEFYGIPTEKKVQVMEGKHINLGEIRISQ*
Ga0075026_1005823312	3300006057	Watersheds	MRRGMLELCLIIIIVIGIHAERLFHQATIEGVISSSSPNPSVVAIKGNDSIKVVSNNGHFGMELQPGDWKLIFASQEINGIQTEKNVQVLEGQRLNMGVIHLAQ*
Ga0075018_106601771	3300006172	Watersheds	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPAAASSSIIAVRGDDSVKVISNDGHFGMELQPGDWRLIFAVKEFYGIPTEKKVQVMEGKHINLGEIRLSQ*
Ga0070716_1009962031	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPAKAFSSIIAVKGEDSVKVISNDGHFGMELQPGDWRLIFAVKEFYGAPTEKKVQVTEGKHINLGEIRLAR*
Ga0070765_1001644253	3300006176	Soil	MRRGILELSLIIAVVIGIHAERLLHNGSIEGRIIPAMASPSVIAVRGNDSVKVTSNNGHFGMELQPGDWKLIFAIKELNGLPTEKNVQVLEGQRINLGEIRLNQ*
Ga0097621_1000144912	3300006237	Miscanthus Rhizosphere	MRRGMLELCLIIIVVIGIHAERLMHNGSIEGRISPVKASQSIIAVRGKDSVKVTSNDGHFGMELQPGDWKLIFAINEYNGVHAVKTVQVREGKRVNLGEIRLTQ*
Ga0075521_1000038714	3300006642	Arctic Peat Soil	MQRGLLELCLIIVVVIGIHSERILHSGSVVGKISPDNLASSVIAVRGGDSVKVMANDGHFGMELQPGDWKLIIALKEYNSLPTEKRIQVQEGQRLNLGEIRLNQ*
Ga0075521_100389082	3300006642	Arctic Peat Soil	MRRGMLELCLIIIVVIGIHAERLLHNGSIEGKVSPARASSSIIAVRGEDSVKVISNDGHFGMELQPGDWRLIFAVKEFYGIPTEKKIQVLEGKHINLGEIRLTQ*
Ga0126319_13448242	3300010147	Soil	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPAMASSSIIAVRGEDSVKVISNDGHFGMELRPGDWKLIFAVKEFYGVPREKKVQVLEGKHINLGEIRLN*
Ga0127503_100543691	3300010154	Soil	PPLRSVFISVNAIFSYAIINLKMQRGFLELCLIIVVVIGIHAERILHSGSIVGKISPDNPASSVIAVRGSDSVKVLANDGHFGMELQPGDWKLIIALKEYNSLPTEKRIQVQEGQRINLGEIRLTP*
Ga0127503_101031312	3300010154	Soil	YNQVQMRRGMLELCLVIVVVIGIHAERILHNGSIEGRISPANTSSSVIAVRGSDSLKVTSNDGHFGMELQPGDWKLIFAIKEINSVPTEKRIQVLEGQRINLGEIRLAQ*
Ga0127503_111244351	3300010154	Soil	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPVTASSSIIAVRGEDSVKVISNDGHFGMELQPGDWKLIFAVKEFYGIPTEKKIQVMEGKHINLGEIRLTQ*
Ga0126346_13981122	3300010865	Boreal Forest Soil	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPVTASSSIIAVRGEDSVKVISNDGHFGMELQPGDWRLIFAVKEIYGIPTEKKVQVLEGKHINLGEIRLTQ*
Ga0150983_165942282	3300011120	Forest Soil	MKMRRGILELSLIIAVVIGIHAERLLHNGSIEGRIIPAMASPSVIAVRGNDSVKVTSNNGHFGMELQPGDWKLIFAIKELNGLPTEKNVQVLEGQRINLGEIRLNQ*
Ga0150985_1137813432	3300012212	Avena Fatua Rhizosphere	KFQNSIIDCDRPPRVIRLFNELTNWKMRRGLLELCLIIVVVIGIHAERLLHNGSIEGRISPAKASSSIIAVRGQDSVKVRSNDGHFGMELQPGDWKLIFAVKEFYGSPTEKKVQVLEGKHINLGEIRLTE*
Ga0150985_1221347642	3300012212	Avena Fatua Rhizosphere	MQIPNSIIDCDRRRVIRLFNELINWKMRRGMLELCLIIIVVIGIHAERLLHNGSIEGRVSPSKASSSIIAVRGEDSIKVTSYDGHFGMELQPGDWKLIFAVKDFYGLP
Ga0150984_1047713502	3300012469	Avena Fatua Rhizosphere	MQIPNSIIDCDRRRVIRLFNEIINWKMRRGMLELCLIIIVVIGIHAERLLHNGSIEGRVSPSKASSSIIAVRGEDSIKVMSYDGHFGMELQPGDWKLIFAVKDFYGLPTEKKIQVLEGKHYNLGEIRLAQ*
Ga0150984_1154091032	3300012469	Avena Fatua Rhizosphere	MRRGLLELCLIIVVVIGIHAERLLHNGSIEGRISPAKASSSIIAVRGQDSVKVRSNDGHFGMELQPGDWKLIFAVKEFYGSPTEKKVQVLEGKHINLGEIRLTE*
Ga0137413_102462581	3300012924	Vadose Zone Soil	MRRGILELCFIIIVVIGIHAERLLHNGSIEGRVSPAMASSAIIAVRGEDSVKVISNDGHFGMELQPGDWRLIFAVKEFYGSPTEKK
Ga0157370_107549432	3300013104	Corn Rhizosphere	MLELCLLIVVVIGIHAERILHNGSIEGRISPANTSSSVIAVRGSDSLKVTSNDGHFGMELQPGDWKLIFAVKEFNSVPTEKKIQVLEGQRINLGEIRLAQ*
Ga0157369_100864832	3300013105	Corn Rhizosphere	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPAKAFSSIIAVRGEDSVKVFSNDGHFGMELQPGDWRLIFAVKEFNVPPTEKKVQVTEGKHINLGEIHLAE*
Ga0157379_118276301	3300014968	Switchgrass Rhizosphere	MLELCLIIIVVIGIHAERLMHNGSIEGRISPVKASQSIIAVRGKDSIKVTSNDGHFGMELQPGDWKLIFAINEYNGVHAVKTVQVREGKRVNLGEIRLTQ*
Ga0157376_100140404	3300014969	Miscanthus Rhizosphere	MLELCLIIIVVIGIHAERLMHNGSIEGRVSPVKASQSIIAVRGKDSIKVTSNDGHFGMELQPGDWKLIFAINEYNGVHAVKTVQVREGKRVNLGEIRLTQ*
Ga0157376_102465782	3300014969	Miscanthus Rhizosphere	MLELCLLIVVVIGIHAERILHNGSIEGRISPANTSSSVIAVRGSDSLKVTSNDGHFGMELQPGDWKLIFAVKDFNSVPTEKKIQVLEGQRINLGEIRLAQ*
Ga0157376_116576131	3300014969	Miscanthus Rhizosphere	ERLLHNGSIVGRIAPGTTASSVIAVRGSDSIKVIPNDGHFGMELQPGDWKLIIAQKEYNSLLTEKKIQVQEGQHINLGEIRLPQ*
Ga0137412_103982102	3300015242	Vadose Zone Soil	MRRGILELCFIIIVVIGIHAERLLHNGSIEGRVSPAMASSAIIAVRGEDSVKVISNDGHFGMELQPGDWRLIFAAKEYNGISTEKKVQVREGKRTNLGEIRLTQ*
Ga0163161_108605922	3300017792	Switchgrass Rhizosphere	MLELCLIIIVVIGIHAERLMHNGSIEGRISPVKASQSIIAVRGKDSVKVTSNDGHFGMELQPGDWKLIFAINEYNGVHAVKTVQVREGKRVNLGEIRLTQ
Ga0066667_109225092	3300018433	Grasslands Soil	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPAQAFSSIIAVRGEDSVKVFSNDGHFGMELQPGDWRLIFAVKEFNVPPTEKKVQVTEGKHINLGEIRLAE
Ga0193726_10094962	3300020021	Soil	MRRGMLELCLIIIVVIGIHAERLLHNGSIEGRVSPSVASPSIIAIRGNDSIRVSSNEGHFGMELQPGDWRLIFAAKEYNGISTEKKVQVREGKRINLGEIRLTQ
Ga0193753_100007392	3300020034	Soil	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPAMASSAIIAVRGEDSVKVISNDGHFGMELQPGDWKLIFAVKEFYGVPTEKKVQILEGKHINLGEIRLN
Ga0193724_10083912	3300020062	Soil	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPAIASSSIIAVRGEDSVKVISNDGHFGMELQPGDWRLIFAVKEFYGIPTEKKVQVLEGKHINLGEIRLTQ
Ga0210399_101884701	3300020581	Soil	MQRGILELCLIIAVVIGIHAERLLHSGSIEGRISPSVGSPSVIAVRGNDSVKVTSNNGHFGMELQPGDWKLIFAIKELNGIPTEKNVQVLEGQRINLGEIRLNQ
Ga0179596_104171751	3300021086	Vadose Zone Soil	CLIIIVVIGIHAERLLHNGSIEGRVSPAVTSPSIIAIRGNDSIKVSSNEGHFGMELQPGDWRLIFAAKEYNGISTEKKVQVREGKRTNLGEIRLTQ
Ga0210397_101282871	3300021403	Soil	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRLSPATASSSIIAVRGEDSVKVISNDGHFGMELQPGDWRLIFAVKEFYGIPTEKKVQVLEGKHINLGEIRLTQ
Ga0210397_103157161	3300021403	Soil	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPALASSSIIAVRGEDSVKVISYDGHFGMELQPGDWRLIFAVKELYGAPTEKKVQVQEGKHINLGEIRLTQ
Ga0210397_104591392	3300021403	Soil	KMRRGMLELCLIIIAVIGIHAERLLHNGTIEGRISPAIATPSIIAVRGSDSVNVISNNGHFGTDLRPGDWKLIFASSEYNAVPTEKRVQVLEGQRINLGEIRLTQ
Ga0210397_108461142	3300021403	Soil	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPVMASSSIIAVRGEDSVKVISNDGHFGMELQPGDWRLIFAVKEFYGIPTEKKVQVLEGKHINLGEIRLTQ
Ga0210387_103419072	3300021405	Soil	MRRGLLELCLIIAVVIGIHAERLLHNGSIEGRIFPAMASPSVVAVRGNDSVKVISNDGHFGMELQPGDWKLIFAIKELNGLPIEKNVQV
Ga0210394_102186941	3300021420	Soil	MQRGILELCLIIAVVIGIHAERLLHSGSIEGRISPSMGSPSVIAVRGNDSVKVTSNNGHFGMELQPGDWKLIFAIKELNGIPTEKNVQVLEGQRINLGEIRLNQ
Ga0210394_104725862	3300021420	Soil	MQRGLLELCLIIVVVIGIHAERLLHSGSIEGRISPPAASSSVIAVRGNDSVKVNSNNGHFGMELQPGDWKLIFAIKELNGLPTEKKIQVMEGKRINLGEIRLNQ
Ga0210384_100304332	3300021432	Soil	MRRGILELSLIIAVVIGIHAERLLHNGSIEGRIIPAMASPSVIAVRGNDSVKVTSNNGHFGMELQPGDWKLIFAIKELNGLPTEKNVQVLEGQRINLGEIRLNQ
Ga0210402_100365342	3300021478	Soil	MQRGVLELCLIIAVVIGIHAERMLHNGSVEGRIFPAVASPSVIAVRGNDSVKVISNNGHFGMELQPGDWKLIFAIKELNGLPIEKNIQVMEGQRINLGEIRLNQ
Ga0210402_103001632	3300021478	Soil	MQRGILELCLLIAVVIGIHAERLLHSGSIEGRISPSVGSPSVIAVRGNDSVKITSNNGHFGMELQPGDWKLIFAIKELNGIPIEKNVQILEGQRINLGEIRLNQ
Ga0242658_12224421	3300022530	Soil	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPAMASSSIIAVRGQDSVKVISNDGHFGMELQPGDWRLIFAVNELYGISTEKKVQVLEGKHINLGEIRLAQ
Ga0242675_11142091	3300022718	Soil	IDFSCISLIFFFTIISLKMQRGLLELCLIIAVVIGIHSERILHSGSVVGKISPDNQASSVIAVRGNDSVKVVASDGHFGMELQPGDWKLIIALKEYNSLPTEKKIQVQEGQRLNLGEIRLAQ
Ga0208077_10079612	3300025427	Arctic Peat Soil	MQRGLLELCLIIVVVIGIHSERILHSGSVVGKISPDSLASSVIAVRSGDSVKVIANDGHFGMELQPGDWKLIIALKEYNSLPTEKRIQVQEGQRLNLGEIRLNQ
Ga0208076_10366122	3300025464	Arctic Peat Soil	MRRGLLELCLIIVVVIGIHAERLLHSGSVVGKISPGKPVSSIIAVRGNDSVRVIPNNGHFGMELQPGDWRLIIALKEYNSFPTEKRIQVQEGQRLNLGEIRLAQ
Ga0207929_10130002	3300025505	Arctic Peat Soil	MRRGFLELCLIIVVVIGIHAERLFHNGSIEGRISPALASPSVIAVRGNDSVKVNSNNGHFGMELQPGDWKLIFAVKELNGLPTEKKVQVFDGQRINLGEIRLSQ
Ga0208219_11079862	3300025625	Arctic Peat Soil	MLELCLIIIVVIGIHAERLLHNGSIEGRVSPAMASPSIIAVRGNDSVKIKSNDGRFGMELQPGDWKLIFAVKEFNGIPTEKKVQVLEGKRINLGEIRLTE
Ga0209584_100391161	3300025878	Arctic Peat Soil	MQRGLLELCLIIVVVIGIHSERILHSGSVVGKISPDNLASSVIAVRGGDSVKVMANDGHFGMELQPGDWKLIIALKEYNSLPTEKRIQVQEGQRLNLGEIRLNQ
Ga0209584_101729241	3300025878	Arctic Peat Soil	RSSALLCKFQNSIIDCDCHRVIRLFNELINWKMRRGMLELCLIIIVVIGIHAERLLHNGSIEGKVSPARASSSIIAVRGEDSVKVISNDGHFGMELQPGDWRLIFAVKEFYGIPTEKKIQVLEGKHINLGEIRLTQ
Ga0207658_107298211	3300025986	Switchgrass Rhizosphere	LCDAAFHIRFFVNRPFKRYNQIQMRRGMLELCLLIVVVIGIHAERILHNGSIEGRISPANTSSSVIAVRGSDSLKVTSNDGHFGMELQPGDWKLIFAVKEFNSVPTEKKIQVLEGQRINLGEIRLAQ
Ga0209838_100001312	3300026214	Soil	MRRGMLELCLIIVVVIGIHAERLLHNGSIEGRISPAKPSPSIIAVRGNDSVRAVSNDGHFGIDLQPGDWKLIIAAKELNGISTEKKVQVLEGKRVNLGEIRLAQ
Ga0209849_10027503	3300026215	Soil	MRRGILELCLIIVVVIGIHAERLLHNGSIEGKVYPAIASPSIIAIRGNDSVRVISNDGHFGMDLQPGDWRLIFAIKEFNGISTEKKVQVSEGKRTNLGEIRLTQ
Ga0209863_100012829	3300026281	Prmafrost Soil	MRRGFLELSLIIIAVIGIHAERFLHNGSIVGRIFSSSPSPTVIAVRGKDSVRVISNDGRFGMELQPGAWKLIFASNNINGAPTEKNVHVFEGKRINLGDIRLTE
Ga0209863_100021681	3300026281	Prmafrost Soil	MRRGILELCLIIVVVIGIHAERLLHNGSIEGKVYPAIASPSIIAIRGNDSVRVISNDGHFGMDLQPGDRRLIFAIKEFNGISTEKKVQVSEGKRTNLGEIRLTQ
Ga0209890_100652022	3300026291	Soil	MQRGFLELCLIIVVVIGIHAERILHSGSIVGKISPDNPASSVIAVRGSDSVKVLANDGHFGMELQPGDWKLIIALKEYNSLPTEKRIQVQEGQRVNLGEIRLTP
Ga0209839_100001247	3300026294	Soil	MRRGLLELCLIIVVVIGIHAERLLHNGSIVGRISPAEITSSITAVRGSDSVRVTSNDGHFGMDLQPGDWKLIFTIKEYNSIPTEKKVQVLEGQRVNLGEIRLTQ
Ga0209839_100824982	3300026294	Soil	MLELCLIIVVVIGIHAERLLHNGSIEGRISPAKPSPSIIAVRGNDSVRAVSNDGHFGIDLQPGDWKLIIAAKELNGISTEKKVQVLEGKRVNLGEIRLAQ
Ga0209626_11512132	3300027684	Forest Soil	IHAERLMHNGSIEGRISPAKPSPSIIAVRGSDSVRVDSNDGHFGMDLQPGDWKLIFALKEYNAVPTEKKVQVLEGKRVNLGEIRLDQ
Ga0209693_103900271	3300027855	Soil	AERLLHNGSIEGRIIPAMASPSVIAVRGNDSVKVTSNNGHFGMELQPGDWKLIFAIKELNGLPTEKNVQVLEGQRINLGEIRLNQ
Ga0209068_100915302	3300027894	Watersheds	MRRGMLELCLIIIIVIGIHAERLFHQATIEGVISSSSPNPSVVAIKGNDSIKVVSNNGHFGMELQPGDWKLIFASQEINGIQTEKNVQVLEGQRLNMGVIHLAQ
Ga0209068_102181832	3300027894	Watersheds	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPAAASSSIIAVRGDDSVKVISNDGHFGMELQPGDWRLIFAVKEFYGIPTEKKVQVMEGKHINLGEIRLSQ
Ga0209006_115235751	3300027908	Forest Soil	WKMRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPVMASSSIIAVRGEDSVKVISNDGHFGMELQPGDWRLIFAVKEFYGIPTEKKVQVLEGKHINLGEIRLTQ
Ga0209069_103579332	3300027915	Watersheds	MLELCLIIIIVIGIHAERLFHQATIEGVISSSSPNPSVVAIKGNDSIKVVSNNGHFGMELQPGDWKLIFASQEINGIQTEKNVQVLEGQRLNMGVIHLAQ
Ga0075384_100184361	3300030841	Soil	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPAMTSSSIIAIRGQDSVKVISNDGHFGMELQPGDWRLIFAVNELYGISTEKKVQVLEGKHINLGEIRLAQ
Ga0075384_111535781	3300030841	Soil	PALSSPSVIAVRGSDSIKVNSKNGYFDMDLQPGNWKLVFALKELNSTSTEKNVKVLEGQRVDLGEIRLDQ
Ga0170834_1036105791	3300031057	Forest Soil	MQRGLLELCLIIVVVIGIHAERLLHNGSIEGRILPANLSRSVVAVRGDDSIRVVSKDGHFGMELQPGDWKLIIGANELNSTPTEKQIQVMEGQRVNLGEIRLVQ
Ga0170834_1038930942	3300031057	Forest Soil	MQRGLLELCLIIAVVIGIHSERILHSGSVVGKISPDNQASSVIAVRGNDSVKVVANDGHFGMELQPGDWKLIIALKEYNSLPTEKKIQVQEGQRLNLGEIRLTQ
Ga0170834_1049389122	3300031057	Forest Soil	MRRGMLELCLIIVVVIGIHAERLLHNGSIEGRVSPSAASPSIIAVKGNDSVRVNSSDGHFGMDLQPGDWKLIFAVKEYPGIPTEKKVQVLEGKRVNLGEIRLAQ
Ga0170834_1057381841	3300031057	Forest Soil	RVIRLFNDLINWKMRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPAMASSSIIAVRGEDSVKVISNDGHFGMELQPGDWRLIFAVNELYGIPTEKKVQVLEGKHINLGEIRLAQ
Ga0170834_1103628952	3300031057	Forest Soil	MQRGLLELCLIIVVVIGIHAERLLHNGSIEGRILPANLSRSVVAVRGDDSIRVVSQDGHFGMELQPGDWKLIIGANELNSTPTEKQIQVMEGQRVNLGEIRLVQ
Ga0170834_1140371531	3300031057	Forest Soil	MRRGILELCLLIVVVIGIHAERILHNGSIEGRISPASTSSSVIAVRGSDSLKVTSNDGHFGMELQPGDWKLIFAVKEINSVPTEKRIQVLEGQRINLGEIRLAQ
Ga0170822_170691851	3300031122	Forest Soil	MRRGILELCLLIVVVIGIHAERILHNGSIEGRISPVSTSSSVIAVRGSDSLKVTSNDGHFGMELQPGDWKLIFAVKELNSVPTEKKIQVLEGQRRES
Ga0170823_107193462	3300031128	Forest Soil	FPYFFYYYNSLKMQRGLLELCLIIAVVIGIHSERILHSGSVVGKISPDNQASSVIAVRGNDSVKVVANDGHFGMELQPGDWKLIIALKEYNSLPTEKKIQVQEGQRLNLGEIRLTQ
Ga0170823_136354412	3300031128	Forest Soil	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPAKASSSIIAVRGQDSVKVISNDGHFGMELQPGDWRLIFAVNELYGISTEKKVQVLEGKHINLGEIRLAQ
Ga0170824_1004495981	3300031231	Forest Soil	ISLKMQRGLLELCLIIAVVIGIHSERILHSGSVVGKISPDNQASSVIAVRGNDSVKVVANDGHFGMELQPGDWKLIIALKEYNSFPTEKRIQIQEGQRLNLGEIRLAQ
Ga0170824_1007631591	3300031231	Forest Soil	MRRGMLELCLIIIVVIGIHAERLLHNGSIEGRVSPAVASPSIIAIRGNDSIRVSSNEGHFGMELQPGDWRLIFAAKEFNGISTEKKVQVREGKRTNLGEIRLTQ
Ga0170824_1129086941	3300031231	Forest Soil	LIIVVVIGIHAERLLHNGSIEGRILPANLSRSVVAVRGDDSIRVVSQDGHFGMELQPGDWKLIIGANELNSTPTEKQIQVMEGQRVNLGEIRLVQ
Ga0170824_1197648721	3300031231	Forest Soil	FHILFFENRPFKRYNKVQMRRGMLELCLLIVVVIGIHAERILHNGSIEGRISPANTSSSVIAVRGSDSLKVISNDGHFGMELQPGDWKLIFAVKDFNSVPTEKKIQVLEGQRINLGEIRLAQ
Ga0170824_1264339212	3300031231	Forest Soil	MQRGLLELCLIIVVVIGIHAERLLHNGSIEGRISPAKASPSIIAVRGNDSVTVTSNDGHFGMELQPGDWKLIFAVKEFNGVSTEKKIQVLEGKRVNLGEIRLTQ
Ga0170820_145663722	3300031446	Forest Soil	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPAKASSSIIAVRGQDSVRVISNDGHFGMELQPGDWRLIIAVNELYGISTEKKVQVLEGKHINLGEIRLAQ
Ga0170819_128600171	3300031469	Forest Soil	MRRGILELCLIIIVVIGIHAERLLHNGSIEGRVSPAMASSSIIAVRGEDSVKVISNDGHFGMELQPGDWRLIFAVNELYGIPTEKKYRYWKANILIWAKFG
Ga0170819_170839631	3300031469	Forest Soil	MQRGLLELCLIIVVVIGIHAERLLHNGSIEGRILPANLSRSVVAVRGGDSIRVVSRDGHFGMELQPGDWKLIIGANELNSTPTEKQIQVMEGQRVNLGEIRLVQ
Ga0170818_1023334722	3300031474	Forest Soil	MQRGLLELCLIIAVVIGIHSERILHSGSVVGKISPDNQASSVIAVRGNDSVKVVANDGHFGMELQPGDWKLIIALKEYNSFPTEKRIQIQEGQRLNLGEIRLAQ
Ga0348332_104991512	3300032515	Plant Litter	MRRGMLELVLIIIVVIGIHAERIMHNGFVEGRISPGNTSSSVIAVRGGDSLKINSRDGHFGMDLQPGDWKLIFASTQWNSVPMEKNVQVLEGKRVNMGEIRLVQ
Ga0335083_103527391	3300032954	Soil	MQRGLLELCLIIAAVIGIHSERILHSGSVVGKIFPDNLASSVIAVRGNDSVKVVANDGHFGMELQPGDWKLIIALKEYNTLSTEKRIRMQEGQRLNLGEIRLTQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094324

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences