 |
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F094315 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 106 |
| Average Sequence Length | 156 residues |
| Representative Sequence | MVRPSRCWPGDDLDGFTEIYPQNPLLQAYFDSELLDTSGVPSPKILRVEDPFDVRFRIELYGPAWQCMAGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCDKTCIQLQYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA |
| Number of Associated Samples | 92 |
| Number of Associated Scaffolds | 106 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 50.00 % |
| % of genes near scaffold ends (potentially truncated) | 47.17 % |
| % of genes from short scaffolds (< 2000 bps) | 83.02 % |
| Associated GOLD sequencing projects | 86 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.82 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (82.075 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (16.038 % of family members) |
| Environment Ontology (ENVO) | Unclassified (24.528 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (43.396 % of family members) |
| ⦗Top⦘ |
| ⦗Top⦘ |
| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 2.16% β-sheet: 50.81% Coil/Unstructured: 47.03% | Feature Viewer |
|
|
|||||
| Powered by Feature Viewer | |||||
| Structure Viewer | |
|---|---|
|
| |
| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.82 |
| Powered by PDBe Molstar | |
| SCOP family | SCOP domain | Representative PDB | TM-score |
|---|---|---|---|
| b.2.5.7: DNA-binding domain from NDT80 | d1mnna_ | 1mnn | 0.62283 |
| b.1.18.7: ML domain | d1xwva_ | 1xwv | 0.61446 |
| b.1.18.8: RhoGDI-like | d1kmta1 | 1kmt | 0.60483 |
| b.1.18.7: ML domain | d1nepa_ | 1nep | 0.60457 |
| b.1.18.11: Arrestin/Vps26-like | d3ugua2 | 3ugu | 0.60221 |
| ⦗Top⦘ |
| Pfam ID | Name | % Frequency in 106 Family Scaffolds |
|---|---|---|
| PF03704 | BTAD | 15.09 |
| PF03601 | Cons_hypoth698 | 1.89 |
| PF03176 | MMPL | 1.89 |
| PF02678 | Pirin | 0.94 |
| PF01144 | CoA_trans | 0.94 |
| PF00296 | Bac_luciferase | 0.94 |
| PF09250 | Prim-Pol | 0.94 |
| PF13181 | TPR_8 | 0.94 |
| PF01613 | Flavin_Reduct | 0.94 |
| PF12840 | HTH_20 | 0.94 |
| COG ID | Name | Functional Category | % Frequency in 106 Family Scaffolds |
|---|---|---|---|
| COG3629 | DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain | Transcription [K] | 15.09 |
| COG3947 | Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains | Transcription [K] | 15.09 |
| COG1033 | Predicted exporter protein, RND superfamily | General function prediction only [R] | 1.89 |
| COG2409 | Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily | General function prediction only [R] | 1.89 |
| COG2855 | Uncharacterized membrane protein YadS, UPF0324 family | Function unknown [S] | 1.89 |
| COG1741 | Redox-sensitive bicupin YhaK, pirin superfamily | General function prediction only [R] | 0.94 |
| COG1788 | Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit | Lipid transport and metabolism [I] | 0.94 |
| COG1853 | FMN reductase RutF, DIM6/NTAB family | Energy production and conversion [C] | 0.94 |
| COG2057 | Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit | Lipid transport and metabolism [I] | 0.94 |
| COG2141 | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) | Coenzyme transport and metabolism [H] | 0.94 |
| COG4670 | Acyl CoA:acetate/3-ketoacid CoA transferase | Lipid transport and metabolism [I] | 0.94 |
| ⦗Top⦘ |
| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 82.08 % |
| All Organisms | root | All Organisms | 17.92 % |
| Visualization |
|---|
| Powered by ApexCharts |
| ⦗Top⦘ |
| Habitat | Taxonomy | Distribution |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 16.04% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 11.32% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 8.49% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 6.60% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 5.66% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 5.66% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 4.72% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 4.72% |
| Host-Associated | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated | 3.77% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 3.77% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 2.83% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 2.83% |
| Boreal Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil | 2.83% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 1.89% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.89% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.89% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.94% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.94% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.94% |
| Sugarcane Root And Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil | 0.94% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.94% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 0.94% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.94% |
| Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 0.94% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.94% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 0.94% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.94% |
| Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 0.94% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.94% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 0.94% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.94% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 0.94% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
| 3300003321 | Sugarcane bulk soil Sample H1 | Environmental | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300004799 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300004800 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300004803 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
| 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Environmental | Open in IMG/M |
| 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Environmental | Open in IMG/M |
| 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
| 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
| 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
| 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
| 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
| 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
| 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
| 3300005587 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 | Environmental | Open in IMG/M |
| 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Environmental | Open in IMG/M |
| 3300006031 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100 | Environmental | Open in IMG/M |
| 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
| 3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
| 3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
| 3300006903 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5 | Host-Associated | Open in IMG/M |
| 3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
| 3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
| 3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
| 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
| 3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
| 3300010048 | Tropical forest soil microbial communities from Panama - MetaG Plot_11 | Environmental | Open in IMG/M |
| 3300010361 | Tropical forest soil microbial communities from Panama - MetaG Plot_23 | Environmental | Open in IMG/M |
| 3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
| 3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
| 3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
| 3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
| 3300010858 | Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010861 | Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010865 | Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
| 3300011120 | Combined assembly of Microbial Forest Soil metaT | Environmental | Open in IMG/M |
| 3300012200 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG | Environmental | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
| 3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
| 3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
| 3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
| 3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
| 3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300017947 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG | Environmental | Open in IMG/M |
| 3300019212 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT25_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019228 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019257 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019263 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020075 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020076 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) | Environmental | Open in IMG/M |
| 3300020077 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300021151 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
| 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300022525 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300022527 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300022530 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300022724 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300029984 | I_Fen_E1 coassembly | Environmental | Open in IMG/M |
| 3300031096 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031421 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031469 | Fir Spring Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
| 3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
| 3300031748 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22 | Environmental | Open in IMG/M |
| 3300031770 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17 | Environmental | Open in IMG/M |
| 3300031819 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21 | Environmental | Open in IMG/M |
| 3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
| 3300032770 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5 | Environmental | Open in IMG/M |
| 3300033475 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC | Environmental | Open in IMG/M |
| 3300034652 | Metatranscriptome of peat soil microbial communities from wetland fen in Alaska, United States - Frozen_pond_02R_16 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034668 | Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| INPhiseqgaiiFebDRAFT_1044814161 | 3300000364 | Soil | MPRASKCWPGDDLDGYTEIYPQSPLLHAHWDSEILDTSGVPSHKIIRVEDPFDVRFRIELGGLAWQCMAGDWVFDIRFDEQGGPADFKLSSKLPADVLTVKGWKGCDKTCIQLLYRVPAGTIQESVYELTSTFRLYCCGKPAAIVGFEPKEEYQWYA* |
| JGI10216J12902_1013401781 | 3300000956 | Soil | MVRPSRCWPGDDLDGFTEIYPQNPLLQAYFDSEILDTSGVPSPKILRVEDPFDVRFRIELYGPAWQCMAGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKNWKGCDKTCIQLLYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| JGI10216J12902_1194499711 | 3300000956 | Soil | RAYWDSEILDTSGVPSDKILKVSDPFDVRFRIELDGPAWQCMAGDWVFDVRFDEQGGPADFKLSSLLPADALTVKNWKGCDKTCIELKYTVPANTIQDSVYELTSTFRLYCCGKPAAIVGFEPKEEYQWYA* |
| soilH1_103649492 | 3300003321 | Sugarcane Root And Bulk Soil | MPRPSRCWPGDDLDGYTEIYPESPLLRAHWDSEVLDTRGVPSDKIIRVSDPFDVRFRIELAGPAWQCMSGDWVFDVRFDEQGGPADFKLSSLLPAGALTVKDWKGCDKTCIQHQYRVPAGTIADSVYELTSTFRLYCCGKPAAIVGFEPLEEIQWYA* |
| Ga0062595_1002660101 | 3300004479 | Soil | MVRPSRCWPGDDLDGFTEIYPQNPLLQAYFDSELLDTSGVPSPKILRVEDPFDVRFRIELYGPAWQCMAGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCDKTCIQLLYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0058863_118913522 | 3300004799 | Host-Associated | RPSRCWPGDDLDGYTEIYPESPLLRAHWDSEVLDTRGVPSDKIIRVSDPFDVRFRIELAGPAWQCMSGDWVFDVRFDEQGGPADFKLSSLLPAGALTVKDWKGCDKTCIQHQYRVPAGTIADSVYELTSTFRLYCCGKPAAIVGFEPLEEFQWYA* |
| Ga0058861_118527493 | 3300004800 | Host-Associated | RPSRCWPGDDLDGYTEIYPESPLLRAHWDSEVLDTRGVPSDKIIRVSDPFDVRFRIELAGPAWQCMSGDWVFDVRFDEQGGPADFKLSSLLPAGALTVKDWKGCDRTCIQHQYRVPAGTIADSVYELTSTFRLYCCGKPAAIVGFEPLEEFQWYA* |
| Ga0058862_115946191 | 3300004803 | Host-Associated | MPIPSTCWAGDDLDGFTEIYPGNPLLRSYWDSELLDTSGVPSYRIIRVGDPFDVRFRIELIGPAWQCMAGDWVFDVRFDEQGGPADFKLSSKLPAGALTVRDWKGCAKTCIELLYRVPAGTIDDSVYQLTSTFRLYCCGKPAAIVGFEPLGVGLGLDQRRLGPFQLRHVGTGIDLEQL |
| Ga0058862_126916681 | 3300004803 | Host-Associated | MPRPSRCWPGDDLDGYTEIYPESPLLRAHWDSEVLDTRGVPSDKIIRVSDPFDVRFRIELAGPAWQCMSGDWVFDVRFDEQGGPADFKLSSLLPAGALTVKDWKGCDKTCIQHQYRVPAGTIADSVYELTSTFRLYCCGKPAAIVGFEPLEEFQWYA* |
| Ga0066388_1005439951 | 3300005332 | Tropical Forest Soil | SHEGGKQKTPATPFRSAIVSTPATPTPARRIHHPSRCWPGDDLDGYTEIYPQNPLLQAFFDSEIIDISGVPSPKIIRVGDPFDVRFRIELRGPAWECMAGDWVFDFRFEEQGGLDDFKLSSKLPPDALTVKGWRGCDKTCIELLYQVPAGTIADSVYELTSTFRLYCCGKPGPIVGFEPKEEYQWYA* |
| Ga0066388_1035740961 | 3300005332 | Tropical Forest Soil | MTTPSAPGEHEHCHCKRRHHGPSRCWPGDDLDGYTEIYPESPLLHAYWDSEILDTYGVPSKKIIRVSDPFNVRFRIELDGPAWQCMAGDWVFDVRFDEQGGPADFKLSSKLPADALTVKGWKGCEKTCIELLYTVPANTIADSVYEL |
| Ga0070680_1013876651 | 3300005336 | Corn Rhizosphere | RCWPGDDLDGYTEIYPESPLLRAHWDSEVLDTRGVPSDKIIRVSDPFDVRFRIELAGPAWQCMSGDWVFDVRFDEQGGPADFKLSSLLPAGALTVKDWKGCDKTCIQHQYRVPAGTIADSVYELTSTFRLYCCGKPAAIVGFEPLEEFQWYA* |
| Ga0070709_100454053 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | MVRPSRCWPGDDLDGFTEIYPQNPLLQAYYDSEILDTSGVPSPRILRVEDPFDVRFRIELAGPAWQCMSGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCEKTCIQLQYRVPAGTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0070709_101153681 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | GLSEQTVTPARFNRRFIAGCGGGFAARRMVVSGHEMPKPEPGRTSDRNPDERTRSATVPRPSRCWPGDDLDGYTEIYPETPLLHAHWDSEILDTSGVPSHKIIRVGDPFDVRFRIELGGPAWQCMSGDWVFDVRFDEQGGPADFKLSSKLPPDALTVKDWKGCEKTCIQLLYRVPAGTIEESVYELTSTFRLYCCEKPAAIIGFEPKEEYQWYA* |
| Ga0070714_1000240092 | 3300005435 | Agricultural Soil | MVRPSRCWPGDDLDGFTEIYPQNPLLQAFYDSELLDTSGVPSPKIIRVEDPFDVRFRIELYGPAWQCMSGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCDKTCIQLQYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0070714_1000468413 | 3300005435 | Agricultural Soil | VPRPSRCWPGDDLDGYTEIYPETPLLHAHWDSEILDTSGVPSHKIIRVGDPFDVRFRIELGGPAWQCMSGDWVFDVRFDEQGGPADFKLSSKLPPDALTVKDWKGCEKTCIQLLYRVPAGTIEESVYELTSTFRLYCCEKPAAIIGFEPKEEYQWYA* |
| Ga0070713_1008979612 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | MSTPCPPCTPKRKRPPSTCWPGDDLDGYTEIYPESPLLHAYWDSEILDTSGVPSRRIIRVEDTFDVRFRIELTGPAWQCMGGDWVFDVRFEEQGGPADFKLSSLLPVDALTVKDWKGCANTCVELLYRVPANTIKDSVYELTSTFRLYC |
| Ga0070711_1003018782 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | VRPSRCWPGDDLDGFTEIYPQNPLLQAYYDSEILDTSGVPSPRILRVEDPFDVRFRIELAGPAWQCMSGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCEKTCIQLQYRVPAGTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0070708_1001691251 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MPRASKCWPGDDLDGYTEIYPESPLLHAHWDSEILDTSGVPSHKIIRVEDPFDVRFRIELRGLAWQCMAGDWVFDIRFDEQGGPADFKLSSKLPADVLTVKGWKGCDKTCIQLLYRVPAGTIQESVYELT |
| Ga0070706_1005215151 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | MPRASKCWPGDDLDGYTEIYPESPLLHAHWDSEILDTSGVPSHKIIRVEDPFDVRFRIELRGLAWQCMAGDWVFDIRFDEQGGPADFKLSSKLPADVLTVKGWKGCDKTCIQLLYRVPAGTIQESVYELTSTFRLYCCGKPAAIVGFEPKEEYQWYA* |
| Ga0070707_10000132127 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | MPRPSRCWPGDDLDGYTEIYRESPLLRAHWVSEILDTSGVPSHKIIRVGDPFDVRFRIELAGPAWQCMAGDWVFDMRFDEQGGLAKFMLSSLLPTDALTVKDWKGCDTSCVEVKYTVPAGTIEESVFELHSTFRLFCCGKPAAIVGVEPLEEYQWYS* |
| Ga0070698_1006389082 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | SGVPSHKIIRVEDPFDVRFRIELRGLAWQCMAGDWVFDIRFDEQGGPADFKLSSKLPADVLTVKGWKGCDKTCIQLLYRVPAGTIQESVYELTSTFRLYCCGKPAAIVGFEPKEEYQWYA |
| Ga0070697_1010318252 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | KIIRVEDPFDVRFRIELGGLAWQCMAGDWVFDIRFDEQGGPADFKLSSKLPADVLTVKGWKGCDKTCIQLLYRVPAGTIQESVYELTSTFRLYCCGKPAAIVGFEPKEEYQWYA* |
| Ga0066654_108023511 | 3300005587 | Soil | SATMVRPSRCWPGDDLDGFTEIYPQNPLLQAYFDSELLDTSGVPSPKILRVEDPFDVRFRIELYGPAWQCMAGDWYFDMRFDEQGGPADFKLSSKLPADVLTVKNWKGCDKTCIQLQYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0068856_1006680362 | 3300005614 | Corn Rhizosphere | MVRPSRCWPGDDLDGFTEIYPQNPLLQAYFDSELLDTSGVPSPKILRVEDPFDVRFRIELYGPAWQCMAGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCDKTCIQLQYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0066903_1007592472 | 3300005764 | Tropical Forest Soil | MTTPATPTPAKRRHPPSICWPGDDLDGYTEIYPQDPLLHAYWDSEILDVNGVPSRKIIRVEDPFEVRFRIELRGPAWQCMAGDWVFDVRSDEQGGPADFKLSSKLPPDALTVKGWKGCDKTCVELPYTVPAGTIAESVYELTSTFRLYCCGKPGPIVGFEPKEEYQWYA* |
| Ga0066903_1023531512 | 3300005764 | Tropical Forest Soil | MIRPSTCFPGDDLDGYTEIYPQSPLVAYWDSEVLDTSGVPSYKILRVSDPFDVRFRVELVGPAWQCMAGDWVFDIRFDEQGGPADFKLSSLLPADALTVKNWKGCDKTCIELKYTVPANTIQDSVYELTSTFRLFCCGKPAAIVGFEPLEEYQWYL* |
| Ga0066903_1038996382 | 3300005764 | Tropical Forest Soil | MPRPSRCWPGDDLDGYTEIYPESPLLHAYWDSEILDTSGVASHKIIRVEDPFDIRFRIELRGPAWQCMAGDWVFDVRFDEQGGPADFKLSSKLPAGVLTVKNWKGCEKTCIELLYRVPAGTIAESVYEITTTFRLYCCGKPAAI |
| Ga0066903_1072947061 | 3300005764 | Tropical Forest Soil | DLDGYTEIYPQNPLLQAFFDSEIIDISGVPSPKIIRVGDPFDVRFRIELRGPAWECMAGDWVFDFRFEEQGGLDDFKLSSKLPPDALTVKGWRGCDKTCIELLYQVPAGTIADSVYELTSTFRLYCCGKPGPIVGFEPKEEYQWYA* |
| Ga0070717_100337784 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | VPRPSRCWPGDDLDGYTEIYPETPLLHAHWDSEILDTSGVPSHKIIRVEDPFDVRFRIELGGPAWQCMSGDWMFDVRFDEQGGPADFKLSSKLPPDALTVKDWKGCEKTCIQLLYRVPAGTIEESVYELTSTFRLYCCEKPAAIIGFEPKEEYQWYA* |
| Ga0066651_106265881 | 3300006031 | Soil | GVPSPKILRVEDPFDVRFRIELAGPAWQCMAGDWYFDMRFDEQGGPADFKLSSKLPADVLTVKNWKGCDKTCIQLQYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0070716_1000353162 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | MVVSGHEMPKPEPGRTSDRNPDERTRSATVPRPSRCWPGDDLDGYTEIYPETPLLHAHWDSEILDTSGVPSHKIIRVGDPFDVRFRIELGGPAWQCMSGDWVFDVRFDEQGGPADFKLSSKLPPDALTVKDWKGCEKTCIQLLYRVPAGTIEESVYELTSTFRLYCCEKPAAIIGFEPKEEYQWYA* |
| Ga0079221_109840811 | 3300006804 | Agricultural Soil | MVRPSRCWPGDDLDGFTEIYPHNPLLQAFYDSELLDTSGVPSPKIIRVEDPFDVRFRLELYGPAWQCMSGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCDKTCIQLQYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0075434_1007549241 | 3300006871 | Populus Rhizosphere | GVPSPKIIRVGDPFDVRFRIELYGPAWQCMAGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCDKTCIQLLYRVPARTIQDSVCEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0075426_107570321 | 3300006903 | Populus Rhizosphere | QNPLLQAYFDSELLDTSGVPSPKILRVEDPFDVRFRIELYGPAWQCMAGDWYFDMRFEEQGGPADFKLSSRLPAGALTVKDWKGCDKTCIQLLYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0075424_1006187112 | 3300006904 | Populus Rhizosphere | MLARRRPGRLYGDLPQNPLLQAYFDSELLDTSGVPSPKILRVEDPFDVRFRIELYGPAWQCMAGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCDKTCIQLLYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0075435_1002865262 | 3300007076 | Populus Rhizosphere | PQNPLLQAYFDSELLDTSGVPSPKILRVEDPFDVRFRIELYGPAWQCMAGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCDKTCIQLLYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0099827_104615282 | 3300009090 | Vadose Zone Soil | LLRAYWDSEILDTSGVPSEKILRVSDPFDVRFRIELTGPAWQCMAGDWQFDIRFDEQGGPADFKLSSLLPAGALTVKDWKGCDKTCIELKYTVPANTIQESVYELTSTFRLFCCGKPAAIVGFEPLEEYQWYS* |
| Ga0105245_114418671 | 3300009098 | Miscanthus Rhizosphere | MIASGREMAKQNPAIPMRSATMVRPSRCWPGDDLDGFTEIYPQNPLLQAYFDSEILDTSGVPSPRILRVEDPFDVRFRIELAGPAWQCMAGDWYFDMRFDEQGGPADFKLSSRLPAGVLTVKDWKGCDRTCIQLQYGVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWY |
| Ga0126374_102471611 | 3300009792 | Tropical Forest Soil | LLQAFFDSEIIDISGVPSPKIIRVGDPFDVRFRIELRGPAWECMAGDWVFDFRFEEQGGLDDFKLSSKLPPDALTVKGWRGCDKTCIELLYQVPAGTIADSVYELTSTFRLYCCGKPGPIVGFEPKEEYQWYA* |
| Ga0126380_103627211 | 3300010043 | Tropical Forest Soil | MIASGREMAKQNPAIPMRSATMVRPSRCWPGDDLDGFTEIYPQNPLLQAYFDSELLDTSGVPSPKILRVEDPFDVRFRIELYGPAWQCMAGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCEKTCIELQYRVPAGTIDDSVYELTSTFRLYCCGKPGPIVGFEPKEEYQWYA* |
| Ga0126373_100912631 | 3300010048 | Tropical Forest Soil | MTTPSVPSTPSPARRKRPPSICWPGDDLDGYTEIYPESPLLHSYWDSEILDTSGVPSRRIIRVEDPFDVRFRLELRGPAWQCMAGDWVFDVRFDEQGGPADFKLSSLLPAGALTVKGWKGCDTTCVHLQYTVPAKTIQDSVYELTSTFRLY |
| Ga0126378_107405462 | 3300010361 | Tropical Forest Soil | CWPGDDLDGYTEIYPESPLLHSYWDSEILDTSGVPSRRIIRVEDPFDVRFRLELRGPAWQCMAGDWVFDVRFDEQGGPADFKLSSLLPAGALTVKGWKGCDTTCVHLQYTVPAKTIQDSVYELTSTFRLYCCDKPGPIVGFEPKEEYQWYA* |
| Ga0126379_101214002 | 3300010366 | Tropical Forest Soil | MTTPSVPSTPSPARRKRPPSICWPGDDLDGYTEIYPESPLLHSYWDSEILDTSGVPSRRIIRVEDPFDVRFRLELRGPAWQCMAGDWVFDVRFDEQGGPADFKLSSLLPAGALTVKGWKGCDTTCVHLQYTVPAKTIQDSVYELTSTFRLYCCDKPGPIVGFEPKEEYQWYA* |
| Ga0134128_105435712 | 3300010373 | Terrestrial Soil | MRSAIMVRPSRCWPGDDLDGFTEIYPQNPLLQAYYDSEILDTSGVPSPRILRVEDPFDVRFRIELYGPAWQCMSGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCDKTCIQLQYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0126381_1017286781 | 3300010376 | Tropical Forest Soil | MSTPSTPTPSTLDEHCHCKKPPRPPSKCWPGDNLDGYTEIYPESPLLHAYYDSEIFDIRGVPSPKIIRVSDPFDVRFRIELRGPAWECMAGDWVFDVRFDEQGGPADFKLSSRLDPGVLTKKGWRGCDTTCIELRYTVPANKIEESVYELTSTFRLYCCERPG |
| Ga0126383_100564152 | 3300010398 | Tropical Forest Soil | MSTPSTPTPSTLDEHCHCKKPPRPPSKCWPGDNLDGYTEIYPESPLLHAYYDSEIFDIRGVPSPKIIRVSDPFDVRFRIELRGPAWECMAGDWVFDVRFDEQGGPADFKLSSRLDPGVLTKKGWRGCDTTCIELRYTVPANKIEESVYELTSTFRLYCCERPGPIVGFEPLEEFQWYA* |
| Ga0126345_10083821 | 3300010858 | Boreal Forest Soil | DSEVLDTSGVPSPRILRVEDAFDVRFRIELRGPAWQCMGGDWVFDVRFDEQGGPADFKLSSLLPAGALTVKDWKGCDRTCIQLLYTVPANTIKDTVYELTSTFRLYCCGKPGPIVGFEPKEEYQWYA* |
| Ga0126349_13094201 | 3300010861 | Boreal Forest Soil | LLQAYWDSEILDTSGVPSYKILRVSDPFDVRFRIELAGPAWQCMAGDWVFDIRFDEQGGPADFKLSSLLPAGALTVKDWKGCDKTCIQLKYTVPPNTLQDTVYELTSTFRLFCCGKPAAIVGFEPKEEYQWYS* |
| Ga0126346_12644441 | 3300010865 | Boreal Forest Soil | MSTPSTSSPLKAKRPPSTCWPGDDLDGYTEIYPESPLLRAYWDSEVLDTSGVPSPRILRVEDAFDVRFRIELRGPAWQCMGGDWVFDVRFDEQGGPADFKLSSLLPAGALTVKDWKGCDRTCIQLLYTVPANTIKDTVYELTSTFRLYCCGKPGPIVGFEPKEEYQWYA* |
| Ga0105246_120658152 | 3300011119 | Miscanthus Rhizosphere | LQAFYDSELLDTSGVPSPKIIRVEDPFDVRFRIELYGPAWQCMSGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCANTCVELLYRVPANTIKDSVYELTSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0150983_138558151 | 3300011120 | Forest Soil | MSTPCPPCTPKRKRPPSTCWPGDDLDGYTEIYPESPLLHAYWDSEILDTSGVPSRRIIRVEDTFDVRFRIELTGPAWQCMGGDWVFDVRFEEQGGPADFKLSSLLPVDALTVKDWKGCANTCVELLYRVPANTIKDSVYELTSTFRLYCCGKPGPVVGFEPKEEYQWYA* |
| Ga0137382_105990141 | 3300012200 | Vadose Zone Soil | MIASGREMAKQNPAIPMRSATMVRPSRCWPGDDLDGFTEIYPQNPLLQAYYDSEILDTSGVPSPRILRVEDPFDVRFRIELAGPAWQCMAGDWYFDMRFDEQGGPADFKLSSRLPAGVLTVKDWKGCDRTCIQLQYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0150985_1105626571 | 3300012212 | Avena Fatua Rhizosphere | GRIPGTLNEYRSSTVPTYGPSRPSTCWPGDNLDGYLEFNPPSAILIAYWDAEILDTTGVPSPKILPTSSPFDVRFRLELTGPAWRCMTGDWVFDLRFDEQGGPADFPLSTLLPADALTVKDWKGCDHGTCIERQYTVPAGTIQESVYEITAVMRLHCCGRPGPVVGFEPLEEYQWYS* |
| Ga0150984_1228501061 | 3300012469 | Avena Fatua Rhizosphere | WSGRIPGALNEYRSSTVPTYGPSRPSTCWPGDNLDGYLEFNPPSAILIAYWDAEILDTTGVPSPKILPTSSPFDVRFRLELTGPAWRCMTGDWVFDLRFDEQGGPADFPLSTLLPADALTVKDWKGCDHGTCIERQYTVPAGTIQESVYEITAVMRLHCCGRPGPVVGFE |
| Ga0164298_110058802 | 3300012955 | Soil | KIIRVEDPFDVRFRIELYGPAWQCMSGDWYFDMRFDKQGGPADFKLSSRLPAGALTVKDWKGCEKTCIQLQYRVPAGTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0164299_103976872 | 3300012958 | Soil | MVRPSRCWPGDDLDGFTEIYPQNPLLQAFYDSELLDTSGVPSPKIIRVEDPFDVRFRIELAGPAWQCMSGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCDKTCIQLQYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0164301_115044831 | 3300012960 | Soil | RNPAIPMRSATMVRPSRCWPGDDLDGFTEIYPQNPLLQAFYDSELLDTSGVPSPKIIRVEDPFDVRFRIELYGPAWQCMSGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCDKTCIQLQYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0164302_109868621 | 3300012961 | Soil | FGMGESATTTELHPFDVRFRIELYGPAWQCMSGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCDKTCIQLQYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA |
| Ga0126369_127151181 | 3300012971 | Tropical Forest Soil | RHPPSICWPGDDLDGYTEIYPQDPLLHAYWDSEILDVNGVPSRKIIRVEDPFEVRFRIELRGPAWQCMAGDWVFDVRFDEQGGPADFKLSSKLPPDALTVKGWKGCDKTCVELPYTVPAGTIAESVYELTSTFRLYCCGKPGPIVGFEPKEEYQWYA* |
| Ga0126369_135803761 | 3300012971 | Tropical Forest Soil | MTTPSVPSTPSPARRKRPPSICWPGDDLDGYTEIYPESPLLHSYWDSEILDTSGVPSRRIIRVEDPFDVRFRLELRGPAWQCMAGDWVFDVRFDEQGGPADFKLSSLLPAGALTVKGWKGCDTTCVHLQYTVPAKIIQDSVYELTSTFRL |
| Ga0132258_135753932 | 3300015371 | Arabidopsis Rhizosphere | MVASGREMAKQNPAIPMRSATMVRPSRCWPGDDLDGFTEIYPKNPLLQAYYDSEILDTSGVPSPRILRVEDPFDVRFRIELAGPAWQCMSGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCEKTCIQLQYRVPAGTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0132256_1024807651 | 3300015372 | Arabidopsis Rhizosphere | MVASGREMAKQNPAIPMRSATMVRPSRCWPGDDLDGFTEIYPKNPLLQAYYDSEILDTSGVPSPRILRVEDPFDVRFRIELAGPAWQCMSGDWYFDMRFDEQGGPADFKLSSRLPAGVLTVKDWKGCERTCIQLQYRVPKGTIPDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA* |
| Ga0187785_103514421 | 3300017947 | Tropical Peatland | MTRPTPIPSICWPGDNLDGFTEINPPSAMLRAYWDSEILDISGVPSDRILKVSDPFDVRFRIELVGPAWQCMSGDWVFDVRFDEQGGPADFQLSSLLPAGALTVKDWKGCEKTCVELQYRVPPNLLQDTVYQLTSTFRLHCCGKPASIVGFEPKKEYQWYV |
| Ga0180106_10711401 | 3300019212 | Groundwater Sediment | GPPGGQAAIPEMQSPRSAQKRPRREARWATMTRSSTCWPGSNLDGYTEINPPAGMLRAYWASEILDTSGVPSDRILKVGNPFDVRFRIELVGPAWQCMTGDWVFDIRFDEQGGPADFKLSSLLPPNVLTVTNWKGCQTTCIEHRYTVGPNLLQDTVYELTSTFRLHCCGKPAAIVGFEPKEEYQWYV |
| Ga0180119_11231801 | 3300019228 | Groundwater Sediment | MPRDSSCWPGTDLDGFTEFNPPAALLTAYWNAELLDTSGVPSERIIRVSDPFDVRFRVELLGPAWHCMAGDWVFDIRLDERGGPEDFKLSSKLPPDALSVVNWKGCEKTCVELKYTVPAKIVPEAVYELTATMRLHCCGRPGPVVGFDQLDEYQ |
| Ga0180115_11736511 | 3300019257 | Groundwater Sediment | PSRIPGEPNEHRSSIMPRDSSCWPGTDLDGFTEFNPPAALLTAYWNAELLDTSGVPSERIIRVSDPFDVRFRVELLGPAWHCMAGDWVFDIRLDERGGPEDFKLSSKLPPDALSVVNWKGCEKTCVDLKYTVPAKIVPEAVYELTATMRLHCCGRPGPVVGFDQLDEYQWYE |
| Ga0180115_13475681 | 3300019257 | Groundwater Sediment | WPNRIPGAQGKQESTVPTYGPQRPSTCWPTDNLNGYVEFNPQPGVLKAYWNAELLDTSGVPSEKIIRVEDPFDVRFRLELSGPGWQCMSGDWVFDIRFDEQGEQGDFKLSSKLPADVLTLKGWKGCDNNGTCVQHQYTVPAYTIQESVYELTATMRLHCCERPGPIV |
| Ga0184647_14930571 | 3300019263 | Groundwater Sediment | MPKYGPPIPSTCWPGDNLDGFLEFNPPDAMLRAYWDAEILDTTGLPSSRIIPVAAPFDVRFRLELTGPAWQCMAGDWVFDLRFDEQGGPLDFKLSSKLPPDALTVKDFKGCEGLCVHLQYTVPANTISEAVYEISATMRLHCCGKPGPVVGFEPLEEYQWYS |
| Ga0197907_103571593 | 3300020069 | Corn, Switchgrass And Miscanthus Rhizosphere | MPRPSRCWPGDDLDGYTEIYPESPLLRAHWDSEVLDTRGVPSDKIIRVSDPFDVRFRIELAGPAWQCMSGDWVFDVRFDEQGGPADFKLSSLLPAGALTVKDWKGCEKTCIQLQYRVPAGTIADSVYELTSTFRLYCCGKPAAIVGFEPLEEFQWYA |
| Ga0197907_108435911 | 3300020069 | Corn, Switchgrass And Miscanthus Rhizosphere | MPIPSTCWAGDDLDGFTEIYPGNPLLRSYWDSELLDTSGVPSYRIIRVGDPFDVRFRIELIGPAWQCMAGDWVFDVRFDEQGGPADFKLSSKLPAGALTVRDWKGCAKTCIELLYRVPAGTIDDSVYQLTSTFRLYCCGKPAAIVGFEPLGEYQWYT |
| Ga0206349_11734931 | 3300020075 | Corn, Switchgrass And Miscanthus Rhizosphere | KQRRLRALIAASSPEALPVSRGGRCSLERPRGGRTGITREPMRSTVMPRPSRCWPGDDLDGYTEIYPESPLLRAHWDSEVLDTRGVPSDKIIRVSDPFDVRFRIELAGPAWQCMSGDWVFDVRFDEQGGPADFKLSSLLPAGALTVKDWKGCDKTCIQHQYRVPAGTIADSVYELTSTFRLYCCGKPAAIVGFEPLEEFQWYA |
| Ga0206355_13525482 | 3300020076 | Corn, Switchgrass And Miscanthus Rhizosphere | MPRPSRCWPGDDLDGYTEIYPESPLLRAHWDSEVLDTRGVPSDKIIRVSDPFDVRFRIELAGPAWQCMSGDWVFDVRFDEQGGPADFKLSSLLPAGALTVKDWKGCDKTCIQHQYRVPAGTIADSVYELTSTFRLYCCGKPAAIVGFEPLEEFQWYA |
| Ga0206351_104136831 | 3300020077 | Corn, Switchgrass And Miscanthus Rhizosphere | RGGRTGITREPMRSTVMPRPSRCWPGDDLDGYTEIYPESPLLRAHWDSEVLDTRGVPSDKIIRVSDPFDVRFRIELAGPAWQCMSGDWVFDVRFDEQGGPADFKLSSLLPAGALTVKDWKGCDKTCIQHQYRVPAGTIADSVYELTSTFRLYCCGKPAAIVGFEPLEEFQWYA |
| Ga0179584_11118461 | 3300021151 | Vadose Zone Soil | MSTPATPYPHKPKRPPSNCWPGDDLDGYTEIYPESPLLRAYWDSEVLDTSGVPSPRILRVEDAFDVRFRIELRGPAWQCMGGDWVFDVRFDEQGGPADFKLSSLLPAGALTVKDWKGCDRTCVQRLYTVPANTIKDTVYELTSTFRLYCCGKPGPIVGFEPKEEYQWYA |
| Ga0126371_102614791 | 3300021560 | Tropical Forest Soil | MTTPATPTPAKRRHPPSICWPGDDLDGYTEIYPQDPLLHAYWDSEILDVNGVPSRKIIRVEDPFEVRFRIELRGPAWQCMAGDWVFDVRFDEQGGPADFKLSSKLPPGALTVKGWKGCDKTCVELPYTVPAGTIAESVYELTSTFRLYCCGKPGPIVGFEPKEEYQWYA |
| Ga0126371_109840122 | 3300021560 | Tropical Forest Soil | YTEIYPESPLLHAYYDSEIFDIRGVPSPKIIRVSDPFDVRFRIELRGPAWECMAGDWVFDVRFDEQGGPADFKLSSRLDPGVLTKKGWRGCDTTCIELRYTVPANKIEESVYELTSTFRLYCCERPGPIVGFEPLEEFQWYA |
| Ga0126371_110460401 | 3300021560 | Tropical Forest Soil | MTTPSVPSTPSPARRKRPPSICWPGDDLDGYTEIYPESPLLHSYWDSEILDTSGVPSRRIIRVEDPFDVRFRLELRGPAWQCMAGDWVFDVRFDEQGGPADFKLSSLLPAGALTVKGWKGCDTTCVHLQYTVPAKIIQDSVYELTSTFRLYCCDKPGPIVGFEPKEEYQWYA |
| Ga0224712_100307821 | 3300022467 | Corn, Switchgrass And Miscanthus Rhizosphere | RPSRCWPGDDLDGYTEIYPESPLLRAHWDSEVLDTRGVPSDKIIRVSDPFDVRFRIELAGPAWQCMSGDWVFDVRFDEQGGPADFKLSSLLPAGALTVKDWKGCDKTCIQHQYRVPAGTIADSVYELTSTFRLYCCGKPAAIVGFEPLEEFQWYA |
| Ga0242656_11121101 | 3300022525 | Soil | MARPSRCWPGDDLDGYTEIYPQNPLLQAYFDSEILDTSGVPSLKILRVEDPFDVRFRIELYGPAWQCMSGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCDRTCIQLLYRVPAGTIQESVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYARADQLGFRCRV |
| Ga0242664_11190831 | 3300022527 | Soil | MPRPSHCFPGDDLDGYTEIYPESPLLRAHWDSEILDTSGVPSFRILRVSDPFDVRFRIELGGPAWRCMAGDWVFDVRFEEQGGLDDFKLSSKLPAGALTVKDWKGCEKHCVELLYRVPAGTIQASVYQITSTFQLYCCGKPGVIVGFEPLKEYQWYT |
| Ga0242658_11802251 | 3300022530 | Soil | PSHCFPGDDLDGYTEIYPESPLLRAHWDSEILDTSGVPSFRILRVSDPFDVRFRIELGGPAWRCMAGDWVFDVRFEEQGGLDDFKLSSKLPAGALTVKDWKGCEKHCVELLYRVPAGTIQASVYQITSTFQLYCCGKPGVIVGFEPLKEYQWYT |
| Ga0242665_104026331 | 3300022724 | Soil | MARPSRCWPGDDLDGYTEIYPQNPLLQAYFDSEILDTSGVPSLKILRVEDPFDVRFRLELAGPAWQCMAGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCDRTCIQLLYRVPAGTIQESVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA |
| Ga0207692_100151503 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | MVRPSRCWPGDDLDGFTEIYPQNPLLQAFYDSELLDTSGVPSPKIIRVEDPFDVRFRIELYGPAWQCMSGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCDKTCIQLQYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA |
| Ga0207685_105966662 | 3300025905 | Corn, Switchgrass And Miscanthus Rhizosphere | FDSELLDTSGVPSPKILRVEDPFDVRFRIELYGPAWQCMAGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCEKTCIQLQYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA |
| Ga0207699_100791343 | 3300025906 | Corn, Switchgrass And Miscanthus Rhizosphere | MVRPSRCWPGDDLDGFTEIYPQNPLLQAYYDSEILDTSGVPSPRILRVEDPFDVRFRIELAGPAWQCMSGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCEKTCIQLQYRVPAGTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA |
| Ga0207646_1000586310 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | MPRPSRCWPGDDLDGYTEIYRESPLLRAHWVSEILDTSGVPSHKIIRVGDPFDVRFRIELAGPAWQCMAGDWVFDMRFDEQGGLAKFMLSSLLPTDALTVKDWKGCDTSCVEVKYTVPAGTIEESVFELHSTFRLFCCGKPAAIVGVEPLEEYQWYS |
| Ga0207646_100213183 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | MPRASKCWPGDDLDGYTEIYPESPLLHAHWDSEILDTSGVPSHKIIRVEDPFDVRFRIELRGLAWQCMAGDWVFDIRFDEQGGPADFKLSSKLPADVLTVKGWKGCDKTCIQLLYRVPAGTIQESVYELTSTFRLYCCGKPAAIVGFEPKEEYQWYA |
| Ga0207700_112475612 | 3300025928 | Corn, Switchgrass And Miscanthus Rhizosphere | VDFSFVLAPCRGKRSTRLTLPPKRKRPPSTCWPGDDLDGYTEIYPESPLLHAYWDSEILDTSGVPSRRIIRVEDTFDVRFRIELTGPAWQCMGGDWVFDVRFEEQGGPADFKLSSLLPVDALTVKDWKGCANTCVELLYRVPANTIKDSVYELTSTFRLYC |
| Ga0207664_100311573 | 3300025929 | Agricultural Soil | VPRPSRCWPGDDLDGYTEIYPETPLLHAHWDSEILDTSGVPSHKIIRVGDPFDVRFRIELGGPAWQCMSGDWVFDVRFDEQGGPADFKLSSKLPPDALTVKDWKGCEKTCIQLLYRVPAGTIEESVYELTSTFRLYCCEKPAAIIGFEPKEEYQWYA |
| Ga0207702_110500292 | 3300026078 | Corn Rhizosphere | ATMVRPSRCWPGDDLDGFTEIYPQNPLLQAYFDSELLDTSGVPSPKILRVEDPFDVRFRIELYGPAWQCMAGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCDKTCIQLQYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA |
| Ga0311332_106807551 | 3300029984 | Fen | DRIIRVGDPFNVRFRLELTGPGWQCMGGDWVFDVRFDEQGGPADFKLSSVLPADALTVKNWKGCDRQCVELTYPVPANTIAESVYEITTTFRLYCCDKPAAIVGFEPLEEYQWYA |
| Ga0308193_10779681 | 3300031096 | Soil | MTRPSTCWPGDDLDGYTEINPPNAWLRAYWDSEILDTSGVPSDRILKVSDPFDVRFRIELVGPAWQCMGGDWVFDVRFDEQGGPADFKLSSLVSAGALTVKDWKGCATTCVELKYTVPPNTLQDTVYELTSTFRLHCCGKPAAIVGFEPKEEYQLYS |
| Ga0170824_1289670861 | 3300031231 | Forest Soil | MTTPSAPSTPSPARRKRPPSICWPGDDLDGYTEIYPESPLLHSYWDSEILDTSGVPSRRIIRVEDPFDVRFRLELRGPAWQCMAGDWVFDVRFDEQGGPADFKLSSKLPAGVLTVKGWRGCDTTCVHLQYTVPAKTIQDSVYELTSTFRLYCCDKPGPIVGFEPKEEYQWYA |
| Ga0308194_101528651 | 3300031421 | Soil | MTRPSTCWPGDDLDGYTEINPPNAWLRAYWDSEILDTSGVPSDRILKVSDPFDVRFRIELVGPAWQCMGGDWVFDVRFDEQGGPADFKLSSLVSAGALTVKDWKGCATTCVELKYTVPPNTLQDTVYELTSTFRLHCCGKPAAIVGFEPKEEYQWYS |
| Ga0170819_144413981 | 3300031469 | Forest Soil | PESPLLHSYWDSEILDTSGVPSRRIIRVEDPFDVRFRLELRGPAWQCMAGDWVFDVRFDEQGGPADFKLSSKLPAGVLTVKGWRGCDTTCVHLQYTVPAKTIQDSVYELTSTFRLYCCDKPGPIVGFEPKEEYQWYA |
| Ga0310686_1115292066 | 3300031708 | Soil | MPRLSKCWPGDDLDGYTEIYPGSPLLHAYWDSEILDTSGVPSHKIIRVEDPFDVRFRIELVGPAWQCMAGDWVFDIRFDEQGGPADFKLSSKLPADALTVKGWKGCDKTCIELQYRVPAGTIEESVYELASTFRLYCCGKPAAIVGFEPKEEYQWYA |
| Ga0310813_111451162 | 3300031716 | Soil | AYFDSELLDTSGVPSPKILRVEDPFDVRFRIELYGPAWQCMAGDWYFDMRFDEQGGPADFKLSSRLPAGALTVKDWKGCDKTCIQLQYRVPARTIQDSVYEITSTFRLYCCGKPAAIVGFEPLEEYQWYA |
| Ga0318492_106060992 | 3300031748 | Soil | MPKAPPSKCWPGDDLDGYTEIYPQNPLLHAYWDSEIIDISGVPSRKIIRVEDPFDVRFRIELTGPAWQCMAGDWVFDVRFDEQGGPADFKLSSLLPPGALTVTDWKGCEKICIELLYTVPAGTISDSVYELTSTFRLYCCGKPGPIVGFEPKEEYQWYA |
| Ga0318521_107202391 | 3300031770 | Soil | MSTPSMASPAKRKHPPSKCWPGDDLDGYTEIYPESPLLHAYWDSEILDEFGVPSRKIIRVEDPFVVRFRIELTGPAWQCMGGDWVFDVDFDEQGGDQDFKLSSKLPADALTVKDWKGCNTTCIELTYTVPAGTIQDGVYELTSTFRLYCCGRPGPVVGFEPKEEYQWYA |
| Ga0318568_101443221 | 3300031819 | Soil | MSTPSMASPAKRKHPPSICWPGDDLDGYTEIYPESPLLHAYWDSEILDEFGVPSRKIIRVEDPFVVRFRIELTGPAWQCMGGDWVFDVDFDEQGGDQDFKLSSKLPADALTVKDWKGCNTTCIELTYTVPAGTIQDGVYELTSTFRLYCCGRPGPVVGFEPKEEYQWYA |
| Ga0306920_1035050861 | 3300032261 | Soil | SMASPAKRKHPPSICWPGDDLDGYTEIYPESPLLHAYWDSEILDEFGVPSRKIIRVEDPFVVRFRIELTGPAWQCMGGDWVFDVDFDEQGGDQDFKLSSKLPADALTVKDWKGCNTTCIELTYTVPAGTIQDGVYELTSTFRLYCCGRPGPVVGFEPKEEYQWYA |
| Ga0335085_1000301912 | 3300032770 | Soil | MSTPCPPCTPKRKRPPSTCWPGDDLDGYTEIYPESPLLHAYWDSEILDTSGVPSRRIIRVEDSFDVRFRIELRGPAWQCMGGDWVFDVRFDEQGGPADFKLSSLLPVDALTVKDWKGCAKTCVELLYTVPANTIKDSVYELTSTFRLYCCGKPGPIVGFEPKEEYQWYA |
| Ga0310811_1001091113 | 3300033475 | Soil | MPKPSRCWPGDDLDGYTEIYPESPLLRAHWDSEVLDTSGVPSHRIIRVSDPFDVRFRIELAGPAWQCMSGDWVFDIRFDEQGGPADFKLSSLLPAGVLTVKDWKGCEKTCVQLQYRVPAGTIADSVYELTSTFRLYCCGKPAAIVGFEPLEEFQWYA |
| Ga0316598_171540_192_593 | 3300034652 | Untreated Peat Soil | MLRAYWDSEILDTSGVPSDRILKVGDPFDVRFRIELVGPAWTCMTGDWVFDVRFDEQGGPADFKLSSLLPPNVLTVQNWKGCQTTCIELLYRVGPNLLQDTVYELTSTFRLYCCGKPAAIVGFEPKEEYQWYV |
| Ga0314793_128956_21_512 | 3300034668 | Soil | VPTYGPSRPSTCWPGDNLDGYLEFNPPSAILIAYWDAEILDTTGVPSPKILPTSSPFDVRFRLELTGPAWRCMTGDWVFDLRFDEQGGPADFPLSTLLPADALTVKDWKGCDHGTCIERQYTVPAGTIQESVYEITAVMRLHCCGRPGPVVGFEPLEEYQWYS |
| ⦗Top⦘ |
|
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |