Metagenome Family F094297

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094297
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	81 residues
Representative Sequence	MSIPDSVLAAIIAGTATLSASFVQLRSALLREAAGRSSAASRRRNRLQLIILVAIIGAAGVCGFALSQWLTSGERAAQAV
Number of Associated Samples	92
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	37.14 %
% of genes near scaffold ends (potentially truncated)	65.09 %
% of genes from short scaffolds (< 2000 bps)	64.15 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.547 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.962 % of family members)
Environment Ontology (ENVO)	Unclassified (39.623 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.660 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.74% β-sheet: 0.00% Coil/Unstructured: 34.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF16901	DAO_C	64.15
PF01266	DAO	2.83
PF00005	ABC_tran	1.89
PF03279	Lip_A_acyltrans	0.94
PF02635	DrsE	0.94
PF07615	Ykof	0.94
PF02525	Flavodoxin_2	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1560	Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)	Lipid transport and metabolism [I]	0.94
COG4261	Predicted acyltransferase, LPLAT superfamily	General function prediction only [R]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.55 %
All Organisms	root	All Organisms	42.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.55 %
cellular organisms	root	All Organisms → cellular organisms	42.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.55 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.55 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	17.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.66 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.55 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	17.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.66 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.55 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	17.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.66 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %
Kaistiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.55 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	17.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.66 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	3.77 %
Bauldia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.55 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	17.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.66 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	3.77 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.94 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.55 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	17.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.66 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	3.77 %
Bradyrhizobium sp. dw_78	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. dw_78	0.94 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.55 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	17.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.66 %
unclassified Anaeromyxobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter	3.77 %
Bradyrhizobium sp. dw_78	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. dw_78	0.94 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.55 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	17.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.66 %
Anaeromyxobacter sp. RBG_16_69_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp. RBG_16_69_14	3.77 %
Bradyrhizobium sp. dw_78	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. dw_78	0.94 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.94 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_106487634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	590	Open in IMG/M
3300005538\|Ga0070731_10237446	All Organisms → cellular organisms → Bacteria → Proteobacteria	1210	Open in IMG/M
3300005541\|Ga0070733_10472500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	838	Open in IMG/M
3300006086\|Ga0075019_11093544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	517	Open in IMG/M
3300006173\|Ga0070716_100423101	Not Available	964	Open in IMG/M
3300006175\|Ga0070712_100884679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	769	Open in IMG/M
3300006755\|Ga0079222_12476698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	521	Open in IMG/M
3300006806\|Ga0079220_10773345	Not Available	721	Open in IMG/M
3300007258\|Ga0099793_10202900	Not Available	951	Open in IMG/M
3300009137\|Ga0066709_104421479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	513	Open in IMG/M
3300010046\|Ga0126384_10797417	Not Available	845	Open in IMG/M
3300010048\|Ga0126373_11995473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	643	Open in IMG/M
3300010359\|Ga0126376_11856350	Not Available	641	Open in IMG/M
3300010376\|Ga0126381_101378813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1019	Open in IMG/M
3300016270\|Ga0182036_10520536	Not Available	944	Open in IMG/M
3300016270\|Ga0182036_10696368	All Organisms → cellular organisms → Bacteria → Proteobacteria	822	Open in IMG/M
3300016270\|Ga0182036_11424643	Not Available	580	Open in IMG/M
3300016319\|Ga0182033_11774519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	560	Open in IMG/M
3300016387\|Ga0182040_10719070	Not Available	818	Open in IMG/M
3300016387\|Ga0182040_11237286	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300016404\|Ga0182037_11358590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	627	Open in IMG/M
3300016404\|Ga0182037_11889954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	534	Open in IMG/M
3300017966\|Ga0187776_10352934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	971	Open in IMG/M
3300017972\|Ga0187781_10734539	Not Available	715	Open in IMG/M
3300017973\|Ga0187780_11100499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	581	Open in IMG/M
3300017995\|Ga0187816_10104367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. dw_78	1217	Open in IMG/M
3300018062\|Ga0187784_11579212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	519	Open in IMG/M
3300018085\|Ga0187772_10217988	All Organisms → cellular organisms → Bacteria → Proteobacteria	1287	Open in IMG/M
3300020579\|Ga0210407_10702221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	784	Open in IMG/M
3300021372\|Ga0213877_10280529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	560	Open in IMG/M
3300021559\|Ga0210409_10199183	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300021560\|Ga0126371_13659118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	519	Open in IMG/M
3300025939\|Ga0207665_10765318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	762	Open in IMG/M
3300027765\|Ga0209073_10251063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	688	Open in IMG/M
3300027869\|Ga0209579_10378335	Not Available	767	Open in IMG/M
3300029951\|Ga0311371_11110255	Not Available	925	Open in IMG/M
3300030520\|Ga0311372_11863539	Not Available	713	Open in IMG/M
3300031564\|Ga0318573_10168852	All Organisms → cellular organisms → Bacteria → Proteobacteria	1152	Open in IMG/M
3300031640\|Ga0318555_10315772	Not Available	846	Open in IMG/M
3300031679\|Ga0318561_10825966	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300031681\|Ga0318572_10309562	Not Available	934	Open in IMG/M
3300031708\|Ga0310686_108380231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	795	Open in IMG/M
3300031747\|Ga0318502_10244067	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp. RBG_16_69_14	1047	Open in IMG/M
3300031751\|Ga0318494_10292656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	938	Open in IMG/M
3300031751\|Ga0318494_10859982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	531	Open in IMG/M
3300031768\|Ga0318509_10036148	All Organisms → cellular organisms → Bacteria → Proteobacteria	2446	Open in IMG/M
3300031793\|Ga0318548_10525491	Not Available	578	Open in IMG/M
3300031797\|Ga0318550_10385956	Not Available	678	Open in IMG/M
3300031821\|Ga0318567_10833275	Not Available	522	Open in IMG/M
3300031831\|Ga0318564_10028510	All Organisms → cellular organisms → Bacteria → Proteobacteria	2366	Open in IMG/M
3300031833\|Ga0310917_10152668	All Organisms → cellular organisms → Bacteria → Proteobacteria	1525	Open in IMG/M
3300031833\|Ga0310917_10794715	Not Available	639	Open in IMG/M
3300031835\|Ga0318517_10160348	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp. RBG_16_69_14	1007	Open in IMG/M
3300031845\|Ga0318511_10619108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	505	Open in IMG/M
3300031846\|Ga0318512_10443296	Not Available	655	Open in IMG/M
3300031860\|Ga0318495_10252603	Not Available	789	Open in IMG/M
3300031860\|Ga0318495_10388226	Not Available	616	Open in IMG/M
3300031910\|Ga0306923_10529991	All Organisms → cellular organisms → Bacteria → Proteobacteria	1329	Open in IMG/M
3300031912\|Ga0306921_10479101	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp. RBG_16_69_14	1448	Open in IMG/M
3300031946\|Ga0310910_10555027	Not Available	911	Open in IMG/M
3300032010\|Ga0318569_10495066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	570	Open in IMG/M
3300032060\|Ga0318505_10296660	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300032065\|Ga0318513_10262290	Not Available	838	Open in IMG/M
3300032066\|Ga0318514_10149127	All Organisms → cellular organisms → Bacteria → Proteobacteria	1212	Open in IMG/M
3300032066\|Ga0318514_10366674	Not Available	764	Open in IMG/M
3300032068\|Ga0318553_10350509	Not Available	773	Open in IMG/M
3300032094\|Ga0318540_10467898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	609	Open in IMG/M
3300032261\|Ga0306920_102269251	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp. RBG_16_69_14	753	Open in IMG/M
3300032770\|Ga0335085_12362548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	530	Open in IMG/M
3300032805\|Ga0335078_12515176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	531	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.11%
Aquatic	Environmental → Aquatic	1.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.23%
Peat	Environmental → Terrestrial → Peat	1.89%
Freshwater	Environmental → Aquatic → Freshwater	0.94%
Sediment	Environmental → Aquatic → Sediment	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.13%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.55%
Loam	Environmental → Terrestrial → Soil → Loam	7.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	46.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.66%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.66%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.89%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.94%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.94%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001174	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1	Environmental	Open in IMG/M
3300001182	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12679J13547_10098992	3300001174	Forest Soil	MTMPDSVLAAIIAGSATLSASLLQLRSALLREATRGQSAARRKGKIQFIILLVVVGAAAI
JGI12668J13544_10038101	3300001182	Forest Soil	MTMPDSVLAAIIAGSATLSASLLQLRSALLRETTRGQSAARRKGKIQFIILLVVIGAAAIAGFALSQWLTSGERLAQSTMQ
JGI12635J15846_105255422	3300001593	Forest Soil	MTMPDSVLAAIIAGSATLSASLLQLRSALLREATRGQSAARRKGKIQFIILLVVVGAAAIAGFALSQWLTSGE
Ga0066684_100086135	3300005179	Soil	VLTMPDSVLAAIIAGTATLSASLLQLRSALLREATRGQSATRRKGRIQLIILLVVVGGAAIAGFAL
Ga0066684_100282951	3300005179	Soil	VLTMPDSVLAAIIAGTATLSASLLQLRSALLREATRGQSATRRKGRIQLIILLVVVGGAAIAGFALSQWLTS
Ga0066388_1064876341	3300005332	Tropical Forest Soil	VFTQMSDSILAAIIAGTATLSASFMQLRTAALRDRGQPGAATRRKNRMQRIVFLVIVGGAVVSGFALSQWLTQGERNAQGALAKELQA
Ga0070731_102374462	3300005538	Surface Soil	MSDSILAAVIAGTATLSASLLQLRAAILREASRGQSAVRRKGRVQLIILLVIVGAAAVCGFALSQWISSGERLAQRTMQQELQARVAEI
Ga0070733_103498051	3300005541	Surface Soil	MLLSDSVLAAIIAGTATLSASLLQLRSALLREAAGRNAAGGSRRKKRLPLIILGVVVGAAAVSGFALSQWLTNGE
Ga0070733_104725001	3300005541	Surface Soil	MSDSVLAAIIAGTATLSASFLQFRSASLREGGARQSTAARRKNRLQRLVLFVIIGAAAVSGFALSQWLTDGERAAQGALQRELQARIAE
Ga0066670_103789721	3300005560	Soil	MPDSVLAAIIAGTATLSASLLQLRSALLREATRGQSATRRKGRIQLIILLVVVGGAAIAGFAL
Ga0066694_100128984	3300005574	Soil	MPDSVLAAIIAGTATLSASLLQLRSALLREATRGQSATRRKGRIQLIILLVVVGGAAIAGFALSQWLTSGERLAQNTLQRE
Ga0066691_102975672	3300005586	Soil	MPDSVLAAIIAGTATLSASLLQLRSALLREATRSQSATRRKGRIQFIILLVVVGGAAIAGFALSQWLTSGERLAQNTLQ
Ga0075019_110935441	3300006086	Watersheds	MLMPESVLAAIIAGTATLSASFLQLRSALLRDGANRSPSASTRRKGRLQLIMLLVIIGAAAVSGFALSQWLNEGERAAQGVMQRELQARVAEL
Ga0070716_1004231012	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MCIAFFGSERPPAGYRPNGVLAWREELVAEAPMSIPDSVLAAIIAGTATLSASFVQLRSALMREAAAGRNSSAARRRNRLQLIIVFAVIGAAGVCGFALSQWLTS
Ga0070712_1008846793	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPDSVLAAIIAGTATLSASFLQFKSASLLDGGARQSAAARRKNRLQRIVLFVIVGGAAVSGFALSQWLTAGERAAQGALQHE
Ga0079222_102946671	3300006755	Agricultural Soil	MPDSVLAAIIAGTATLSASFLQLRSALLRDRGGQSGAARRKNRLQRILFLVIIGAATVSGFALSQWLTQ
Ga0079222_124766981	3300006755	Agricultural Soil	MVTDSILAALIAGTATLSASFLQLRSAALREAAQGRTATARRKNRVQRIVLLVIIGAAGASGFALSQWLNEGERAAQ
Ga0079220_107733452	3300006806	Agricultural Soil	MVTDSILAALIAGTATLSASFLQLRSAALREAAQGRSATARRKNRVQRIVLLVIIGAAGASGFALSQWLNEGERAAQSALQRELQ
Ga0099793_102029002	3300007258	Vadose Zone Soil	MPDSVLAAIIAGTATLSASLLQLRSALLREATRSQSATRRKGRIQLIILLVVVGGAAIAGFALSQWLTSGERLAQHTLQRE
Ga0066709_1044214792	3300009137	Grasslands Soil	MPDSVLAAIIAGTATLSASLLQLRSALLREAARGQSAARRKGRMQLIILIVVVGGAAIAGFALSQWLTSGERLAQNTLQ
Ga0126384_107974171	3300010046	Tropical Forest Soil	MLVPDSVLAAIIAGTATLSASFLQLRSALLREKAGRGGSAATRRRNRIHLIIFLVIIGAAAASGFALSQWLTAGERAAQS
Ga0126373_119954731	3300010048	Tropical Forest Soil	MLVPDSVLAAIIAGTATLSASFLQLRSALLRDGSGRGGSAATRRRNRIHLIIFLVIVGAAVASGFALSQWLTAGERAAQSVLEREL
Ga0134063_100013351	3300010335	Grasslands Soil	MPDSVLAAIIAGTATLSASLLQLRSALLREATRGQSATRRKGRIQLIILLVVVGGAAIAGFALSQWLTSGER
Ga0126376_118563502	3300010359	Tropical Forest Soil	MSIPDSVLAAIIAGTATLSASFVQLRSALLREAAGRTSRRRNRLQLIIFFAVIGAAGVCGFALSQWLTSGERSAQAVMQRELQARVSEIS
Ga0126381_1013788131	3300010376	Tropical Forest Soil	MLIPDSVLAALIAGTATLSASFVQLRSALLREAAAGRSSSAARRRNRLQLIILFAIIGASGGCGFALSQWLTAGERAAQSVMQRELQ
Ga0137363_100546413	3300012202	Vadose Zone Soil	MPDSVLAAIIAGTATLSASLLQLRSALLREATRSQSATRRKGRIQFIILLVVVGGAAIAGFALSQWLTSGERLAQNTLQR
Ga0137362_117540392	3300012205	Vadose Zone Soil	MTMSDSVLAAIIAGSATLSASLLQLRSALLREATRGQSAARRKGKIQFIILLVVVGAAAIAGFALSQWLTSGERLA
Ga0137386_109142882	3300012351	Vadose Zone Soil	MSIPMSDSVLAAIIAGTATLSASLLQLRSALLREAARGQSASRRKNRVQTILLLIVVGAAAVAGFALSQWLNSGERLAQR
Ga0137358_104917262	3300012582	Vadose Zone Soil	MTMPDSVLAAIIAGSATLSASLLQLRSALLRETTRGQSAARRKGKIQFIILLVVVGAAAI
Ga0137420_12425401	3300015054	Vadose Zone Soil	MTMPDSVLAAIIAGSATLSASLLQLRSALLRETTRGQSAARRKGKIQFIILVVVVGAAAIDCRLRAVAMAH
Ga0182036_105205361	3300016270	Soil	MLIPDSILAAIIAGTATLSASFVQLRSALLRDAAAGRSTSASRRRNRLQLIILVAIIVAAGVCGFALSQWLTAGERAAQGVMQ
Ga0182036_106963682	3300016270	Soil	MLLPDSILAAIIAGTATLSASFVQLRSALLREAAAGRSSSASRRRNRLQLIILCAIIGAAGVCGFALSQWLTAGERAAQGVMQRELQARVA
Ga0182036_114246431	3300016270	Soil	VLAWRRELAATQPMSIPDSVLAAIIAGTATLSASFVQLRSALMREAASRSSGVARRRLRLQFIIFIAVIVAAGVCGFALSQWLTSGERA
Ga0182033_117745191	3300016319	Soil	MSIPDSVLAAIIAGTATLSASFVQLRSALLREAAGRTTRRRNRLQLIIFFAVIGAAGVCGFALSQWLTSGERSAQAVMQRELQARVSEIS
Ga0182040_107190701	3300016387	Soil	MSIPDSVLAAIIAGTATLSASFVQLRSALLREAAAGRSSSASRRRNRVQLIILLVVVGASGVCGFALSQWLTSGERAAQAV
Ga0182040_112372862	3300016387	Soil	MSIPDSVLAAIIAGTATLSASFVQLRSALLREAAGRTTRRRNRLQLIIFFAVIGAAGVCGFALSQWLTSGERSAQA
Ga0182037_113585902	3300016404	Soil	MLIPDSVLAAIIAGTATLSASFVQLRSALMREAAAGRSSSASRRRNRVQLIILIAIIGAAGVCGFALSQWLTSGERAAQAVMQRELQA
Ga0182037_118899542	3300016404	Soil	MSIPDSVLAAIIAGTATLSASFVQLRSALLREAAGRSSAASRRRNRLQLIILVAIIGAAGVCGFALSQWLTSGERAAQAVLQRELQARVSEI
Ga0187776_103529341	3300017966	Tropical Peatland	MFTPTDSVLAAIIAGTATLSASFLQLRSATLREGARGPSAAGARRKNRLQRIVLFVIIGAAAVSGFALSQWLTEGERAAQS
Ga0187783_101307681	3300017970	Tropical Peatland	MPDSILAALIAGTATLSASFLQLRSALLRDGSSRAAASRRKSRLQLIILLVVVGTAAGAGFA
Ga0187781_107345392	3300017972	Tropical Peatland	MLLPDSVLAAIIAGTATLSASFVQLRSALLREATGRTPAAASRRRNRLQLILFCVVVGGAALGGFALSQWLTNGERAAQAVMQRELPARVAEIS
Ga0187780_111004992	3300017973	Tropical Peatland	VFSQMSDSVLAAIIAGTATLSASFLQLRSAALRDRGQPGAAARRKNRMQRIIFLVIIGGAVVSGFALSQWLTQGERNAQ
Ga0187816_101043671	3300017995	Freshwater Sediment	VLAWRGELAAEAPMSIPDSVLAAIIAGTATLSASFVQLRSALLRDAAGRPSAASRRRNRLQLIILLAVISAAGVCGFALSQWLTSGERAAQ
Ga0187784_115792122	3300018062	Tropical Peatland	MLLPDSVLAAIIAGTATLSASFVQLRSALLREATGRTPAAASRRRNRLQLILFCVVVGGAALGGFALSQWLTNGERA
Ga0187772_102179882	3300018085	Tropical Peatland	MSGGGGATRGSVAPESLVFNQMSDSVLAAIIAGTATLSASFLQLRSAALRDRGQPGAAARRKNRMQRIIFLVIIGGAAVSGFAASQWLT
Ga0066667_106109972	3300018433	Grasslands Soil	MPDSVLAAIIAGTATLSASLLQLRSALLREATRGQSATRRKGRIQLIILLVVVGGAAIAGFALS
Ga0066669_104737122	3300018482	Grasslands Soil	MPDSVLAAIIAGTATLSASLLQLRSALLREATRGQSATRRKGRIQLIILLVVVGGAAIAGFALSQWLT
Ga0066669_117326152	3300018482	Grasslands Soil	VLTMPDSVLAAIIAGTATLSASLLQLRSALLREATRGQSATRRKGRIQLIILLVVVGGAAIAGFALSQWLTSG
Ga0210407_107022211	3300020579	Soil	MPDSVIAAIIAGTATLSASFLQLRSAAQRDRGASSAARRKNQLQRIVLFVIIGGAVVSGFALSQWLTQGERAAQGALQRELQA
Ga0210395_101546021	3300020582	Soil	MLGLRPGARGRVLIPMSDSILAAVIAGTATLSASLLQLRAAILREATRGQSAVRRKGRVQLIILLVIVGAAAVCGFALSQWISSGERLAQRTMQ
Ga0210404_108575071	3300021088	Soil	MLGLRPGARGRVLIPMSDSILAAVIAGTATLSASLLQLRAAILREATRGQSAVRRKGRVQLIILLVIVGAAAVCGF
Ga0213877_102805291	3300021372	Bulk Soil	MSIPDSVLAAIIAGTATLSASFVQLRSALLREAAGRPSAATRRRNRLQLIILFAVIGAAGVCGFALSQWLTS
Ga0210384_111399102	3300021432	Soil	MTMPDSVLAAIIAGSATLSASLLQLRSALLRETTRGQSAARRKGKIQFIILLVVIGAAAIAGFALSQWLTSGERL
Ga0210409_101991834	3300021559	Soil	MPDSVLAAIIAGTATLSASFLQFKSASRLDGGARQSAAARRKNRLQRIVLFVILGGAAVSGFALSQWLTAGERAAEGAL
Ga0126371_136591182	3300021560	Tropical Forest Soil	MLVPDSILAAIIAGTATLSASFLQLRSAALREGGSRGGAAATRRRNRVHLIIFLVIVGGAAASGFALSQWLTAGERAAQTVLERELRAQMAELSR
Ga0207665_107653182	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MCIAFFGSERPPAGYRPNGVLAWREELVAEAPMSIPDSVLAAIIAGTATLSASFVQLRSALMREAAAGRNSSAARRRNRLQLIIVFAVIGAAGVCGFALSQWLTSGERAA
Ga0209234_11403211	3300026295	Grasslands Soil	MPDSVLAAIIAGTATLSASLLQLRSALLREATRGQSATRRKGRIQLIILLVVVGGAAIAGFA
Ga0209234_12513811	3300026295	Grasslands Soil	VLTMPDSVLAAIIAGTATLSASLLQLRSALLREATRGQSATRRKGRIQLIILLVVVGGAAIAGFA
Ga0209473_11445751	3300026330	Soil	MPDSVLAAIIAGTATLSASLLQLRSALLREATRGQSATRRKGRIQLIILLVVVGGAAIAGFALSQWLTSGE
Ga0257163_10161351	3300026359	Soil	MTMPDSVLAAIIAGSATLSASLLQLRSALLRETTRGQSAARRKGKIQFIILVVVVGAAAI
Ga0209808_10148831	3300026523	Soil	MPDSVLAAIIAGTATLSASLLQLRSALLREATRGQSATRRKGRIQLIILLVVVGGAAIAGFALSQ
Ga0209215_10447612	3300027266	Forest Soil	MSDSVLAAIIAGTATLSASLLQLRSALLRNASRGVSAGRRKGRLQMIILAVVVGAAAIAGFALSQWLTSGE
Ga0209073_102510631	3300027765	Agricultural Soil	MVTDSILAALIAGTATLSASFLQLRSAALREAAQGRSATARRKNRVQRIVLLVIIGAAGASGFALSQWLNEGERAAQSALQRELQAR
Ga0209579_102741391	3300027869	Surface Soil	MSDSILAAVIAGTATLSASLLQLRAAILREASRGQSAVRRKGRVQLIILLVIVGAAAVCGFALSQWISSGERLAQRTMQQ
Ga0209579_103783351	3300027869	Surface Soil	MPIPMSDSVLAAIIAGTATLSASLLQLRSASVRGGGSRGSGLAIRFKSRLTQILLLGVIVGAAVAGFGASQWLTEGERAAAANME
Ga0307504_100977942	3300028792	Soil	MTMPDSVLAAIIAGSATLSASLLQLRSALLREATRGQSAARRKGKIQFIILLVVVGAAAIAGFALSQWLTSGERLAQTTMQREL
Ga0311371_111102552	3300029951	Palsa	MLAWRGSLSPPRMTMSDSVLAAIIAGTATLSASFLQLRTARLRDGPSRAPSPAQRRRSRLQLIVLLAIIGAAGASGFALSQWLDA
Ga0311372_118635391	3300030520	Palsa	MLAWRGSLSPPRMTMSDSVLAAIIAGTATLSASFLQLRTARLRDGPSRAPSPAQRRRSRLQLIVLLAIIGAAGASGFALSQWLDAG
Ga0318573_101688521	3300031564	Soil	MSIPDSVLAAIIAGTATLSASFVQLRSALLREAAGRSSAASRRRNRLQLIILVAIIGAAGVCGFALSQWLTSGERAAH
Ga0318555_103157721	3300031640	Soil	MSIPDSVLAAIIAGTATLSASFVQLRSALLREAAAGRSSSASRRRNRVQLIILLVVVGASGVCGFALSQWLTSGERAAQAVMQRELQA
Ga0318561_108259662	3300031679	Soil	MLAWRRELAALAPMLLPDSVLAAIIAGTATLSASFVQLRSALMREAAAGRSSSASRRRNRLQLILLLAIIGAAGVCGFALSQWLTRG
Ga0318572_103095621	3300031681	Soil	MSIPDSVLAAIIAGTATLSASFVQLRSALLREAAGRTSRRRNRLQLIIFFAVIGAAGVCGFALSQWLTSGERSAQAVMQRELQAR
Ga0310686_1083802311	3300031708	Soil	VQSPMPDSVLAAIIAGTATLSASFLQLRSAALRDGRADRSAAARRKNRLQRMVLLVIIGAAAVSGFALSRWLTEGERAAQGALQRELQA
Ga0306917_101060141	3300031719	Soil	MLVPDSVLAAIIAGTATLSASFVQLRSALMREAAATRSSSAARRRNRLQLIILCAIIGAAGVCGFALS
Ga0318500_101571742	3300031724	Soil	MLLPDSVLAAIIAGTATLSASFVQLRSALMREAAAGRSSSASRRRNRLQLILLLAIIGAAGVCGFALSQWL
Ga0318502_102440672	3300031747	Soil	MSIPDSVLAAIIAGTATLSASFVQLRSALLREAAGRSSAASRRRHRLQLIILLAIIGAAGVCGFSLSQWLTAGERAAQAVLQ
Ga0318494_102926562	3300031751	Soil	MSIPDSVLAAIIAGTATLSASFVQLRSALLREAAGRSSAASRRRNRLQLIILVAIIGAAGVCGFALSQWLTSGERAAQAV
Ga0318494_108599822	3300031751	Soil	MLIPDSVLAAIIAGTATLSASFVQLRSALMREAAAGRSSSASRRRNRVQLIILIAIIGAAGVCGFALSQWLTSGERAAQAVMQRELQAR
Ga0318554_104655101	3300031765	Soil	VLAWQGQLALDALMLIPDSVLAAIIAGTATLSASFVQLRSALMREAAAGRSSSASRRRNRVQLIILIAIIGAAGV
Ga0318509_100361483	3300031768	Soil	MLIPDSILAAIIAGTATLSASFVQLRSALLRDAAAGRSTSASRRRNRLQLIILVAIIGAAGVCGFALSQWLTAGERAAQGVMQRELQARVAEI
Ga0318548_105254911	3300031793	Soil	MLAWRRELAALAPMLLPDSVLAAIIAGTATLSASFVQLRSALMREAAAGRSSSASRRRNRLQLILLLAIIGAAGVCGFALSQ
Ga0318550_103859562	3300031797	Soil	VLAWQGQLALDALMLIPDSVLAAIIAGTATLSASFVQLRSALMREAAAGRSSSASRRRNRVQLIILIAIIGAAGVCGFALSQWLTSGERAAQ
Ga0318567_108332751	3300031821	Soil	MSIPDSVLAAIIAGTATLSASFVQLRSALLREAAGRSSAASRRRNRLQLIILVAIIGAAGVCGFALSQWLTSGERAAQAVLQRELQAR
Ga0318564_100285103	3300031831	Soil	MLVPDSVLAAIIAGTATLSASFVQLRSALMREAAATRSSSAARRRNRLQLIILCAIIGAAGVCGFALSQWLTAGE
Ga0310917_101526682	3300031833	Soil	MLLPDSILAAIIAGTATLSASFVQLRSALLREAAAGRSSSASRRRNRLQLIILCAIIGAAGVCGFALSQWLTAGERAAQGVM
Ga0310917_107947152	3300031833	Soil	MSIPDSVLAAIIAGTATLSASFVQLRSALLREAAGRTSRRRNRLQLIIFFAVIGAAGVCGFALSQWLTSGERSAQAVMQRELQA
Ga0318517_101603481	3300031835	Soil	MLLPDSILAAIIAGTATLSASFVQLRSALLREAAAGRTTSASRRRNRLQLIILVAIIGASGVCGFALSQWLTAGERAAQ
Ga0318511_106191082	3300031845	Soil	MLIPDSILAAIIAGTATLSASFVQLRSALLRDAAAGRSTSASRRRNRLQLIILVAIIGAAGVCGFALSQWLTAGERAAQGVMQREL
Ga0318512_104432962	3300031846	Soil	MLIPDSILAAIIAGTATLSASFVQLRSALLRDAAAGRSTSASRRRNRLQLIILVAIIGAAGVCGFALSQWLTAGERAAQGVMQRELQARVA
Ga0318495_102526031	3300031860	Soil	MLIPDSVLAAIIAGTATLSASFVQLRSALMREAAAGRSSSASRRRNRVQLIILIAIIGAAGVCGFALSQWLTSGERAAQAVMQREL
Ga0318495_103882261	3300031860	Soil	MSIPDSVLAAIIAGTATLSASFVQLRSALMREAAAGRSSSAARRRNRLQLIILFATIGAAGVCGFALSQWLTSGERAAQGVM
Ga0318520_110633742	3300031897	Soil	VLAWQGQLALDALMLIPDSVLAAIIAGTATLSASFVQLRSALMREAAAGRSSSASRRRNRVQLIILIAIIGAADLGDPGLQL
Ga0306923_105299912	3300031910	Soil	MSIPDSVLAAIIAGTATLSASFVQLRSALLREAAGRTTRRRNRLQLIIFFAVIGAAGVCGFALSQWLTSGERSAQAVMQ
Ga0306921_104791012	3300031912	Soil	MAIPDSVLAAIIAGTATLSASFVQLRSALLREAAAGRSSSAARRRNRLQLIILCAIIGAAGVCGFALSQWLT
Ga0310910_105550271	3300031946	Soil	MLAWRRELAALAPMLLPDSVLAAIIAGTATLSASFVQLRSALMREAAAGRSSSASRRRNRLQLILLLAIIGAAGVCGFALSQWLTAGE
Ga0318569_104950662	3300032010	Soil	MLLPDSILAAIIAGTATLSASFVQLRSALLREAAAGRSSSASRRRNRLQLIILCAIIGAAGVCGFALSQWLTAGERAAQGVMQREL
Ga0318505_102966601	3300032060	Soil	MLLPDSVLAAIIAGTATLSASFVQLRSALMREAAAGRSSSASRRRNRLQLILLLAIIGAAGVCGFALSQWLTAGERAAQGVMQREL
Ga0318513_102622902	3300032065	Soil	MLAWRRELAALAPMLLPDSVLAAIIAGTATLSASFVQLRSALMREAAAGRSSSASRRRNRLQLILLLAIIGAAGVCGFALSQWLTAGELE
Ga0318514_101491271	3300032066	Soil	MLIPDSILAAIIAGTATLSASFVQLRSALLRDAAAGRSTSASRRRNRLQLIILVAIIGAAGVCGFALSQWLTAGERAAQ
Ga0318514_103666742	3300032066	Soil	MLMPDSVLAAIIAGTATLSASFLQLRSALLRDAASRSGSAATRRKNRLQLIIFLAIIGGAAASGFALSQWLTAGERAAQGVMQRELQA
Ga0318553_103505092	3300032068	Soil	MLIPDSVLAAIIAGTATLSASFVQLRSALLRDAAAGRATSASRRRNRLQLIILVAIIGASGVCGFALSQWLTAGERAAQGVMQ
Ga0318540_104678982	3300032094	Soil	MLIPDSVLAAIIAGTATLSASFVQLRSALMREAAAGRSSSASRRRNRVQLIILIAIIGAAGVCGFALSQWLTSGERAAQAVMQRELQARV
Ga0307471_1008901092	3300032180	Hardwood Forest Soil	MTMPDSVLAAIIAGSATLSASLLQLRSALLREATRGQSAARRKGKIQFIILIVVVGAAAIAGFALSQWLTSGERLAQTTMQRELQA
Ga0306920_1022692512	3300032261	Soil	MSIPDSVLAAIIAGTATLSASFVQLRSALMREAAAGRSSAGARRRNRLQLIILFAVIGAAGLCGFALSQWLTAGERA
Ga0335085_123625481	3300032770	Soil	VFTQMSDSVLAAIIAGTATLSASFLQLRSAALRDRGVPGAAARRKNRLQRIIFLVIIGASAVSGFAASQWLNEGERAAQGALQKE
Ga0335078_125151762	3300032805	Soil	VLTPSDSVLAAIIAGTATLSASFLQLRSAALREARSTGSKRKSRLQRIVFLAIIGGAAVSGFAVSQWLTAGERSAQGVLAKELQARIAEVSHT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094297

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences