Metagenome / Metatranscriptome Family F094293

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094293
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	94 residues
Representative Sequence	MHRLFGLLAVMAAGLGLYLLFDAAPSGAGKALDGAPVAYSGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLALLGGVCAGILVLF
Number of Associated Samples	86
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.70 %
% of genes near scaffold ends (potentially truncated)	39.62 %
% of genes from short scaffolds (< 2000 bps)	82.08 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.113 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (15.094 % of family members)
Environment Ontology (ENVO)	Unclassified (29.245 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.943 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.02% β-sheet: 0.00% Coil/Unstructured: 40.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF13763	DUF4167	55.66
PF11799	IMS_C	3.77
PF00005	ABC_tran	3.77
PF00817	IMS	2.83
PF13414	TPR_11	1.89
PF12399	BCA_ABC_TP_C	1.89
PF02653	BPD_transp_2	1.89
PF12471	GTP_CH_N	0.94
PF14748	P5CR_dimer	0.94
PF01850	PIN	0.94
PF03734	YkuD	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	2.83
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.94
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.11 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.11 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.11 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	96.23 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	92.45 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.89 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	23.58 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7.55 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.83 %
Unclassified	root	N/A	1.89 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	0.94 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	0.94 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.58 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7.55 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.89 %
Unclassified	root	N/A	1.89 %
Casimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Casimicrobiaceae	0.94 %
Chromobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.58 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7.55 %
Unclassified	root	N/A	1.89 %
Casimicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Casimicrobiaceae → Casimicrobium	0.94 %
Pseudogulbenkiania	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Pseudogulbenkiania	0.94 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.94 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.58 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7.55 %
Unclassified	root	N/A	1.89 %
unclassified Pseudogulbenkiania	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Pseudogulbenkiania → unclassified Pseudogulbenkiania	0.94 %
Casimicrobium huifangae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Casimicrobiaceae → Casimicrobium → Casimicrobium huifangae	0.94 %
Hyphomicrobium zavarzinii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium zavarzinii	0.94 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.58 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7.55 %
Unclassified	root	N/A	1.89 %
Pseudogulbenkiania sp. NH8B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Pseudogulbenkiania → unclassified Pseudogulbenkiania → Pseudogulbenkiania sp. NH8B	0.94 %
Casimicrobium huifangae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Casimicrobiaceae → Casimicrobium → Casimicrobium huifangae	0.94 %
Hyphomicrobium zavarzinii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium zavarzinii	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003324\|soilH2_10324328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1498	Open in IMG/M
3300004156\|Ga0062589_101719966	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300004479\|Ga0062595_100662609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	829	Open in IMG/M
3300004629\|Ga0008092_11286867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300005178\|Ga0066688_10540803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	749	Open in IMG/M
3300005331\|Ga0070670_101974916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
3300005332\|Ga0066388_100153081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2887	Open in IMG/M
3300005332\|Ga0066388_100364899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2091	Open in IMG/M
3300005332\|Ga0066388_100400056	All Organisms → cellular organisms → Bacteria → Proteobacteria	2019	Open in IMG/M
3300005332\|Ga0066388_103647568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	786	Open in IMG/M
3300005332\|Ga0066388_104502746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	710	Open in IMG/M
3300005332\|Ga0066388_106581242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Pseudogulbenkiania → unclassified Pseudogulbenkiania → Pseudogulbenkiania sp. NH8B	586	Open in IMG/M
3300005365\|Ga0070688_100345160	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300005365\|Ga0070688_101435028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300005434\|Ga0070709_10747784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	764	Open in IMG/M
3300005529\|Ga0070741_10000729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	111642	Open in IMG/M
3300005577\|Ga0068857_100840062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	878	Open in IMG/M
3300005578\|Ga0068854_100997083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	741	Open in IMG/M
3300005615\|Ga0070702_100479384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	909	Open in IMG/M
3300005713\|Ga0066905_100052416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2508	Open in IMG/M
3300005713\|Ga0066905_102056714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300005764\|Ga0066903_100007876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium zavarzinii	9733	Open in IMG/M
3300005764\|Ga0066903_100043353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5350	Open in IMG/M
3300005764\|Ga0066903_100275434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2631	Open in IMG/M
3300005764\|Ga0066903_101672652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1211	Open in IMG/M
3300006031\|Ga0066651_10615791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300006173\|Ga0070716_100500643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	896	Open in IMG/M
3300006794\|Ga0066658_10041296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1936	Open in IMG/M
3300006797\|Ga0066659_11048702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300006904\|Ga0075424_100712327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1072	Open in IMG/M
3300006953\|Ga0074063_13417202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300009094\|Ga0111539_11056600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	944	Open in IMG/M
3300009098\|Ga0105245_10426570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1330	Open in IMG/M
3300009177\|Ga0105248_10290141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1842	Open in IMG/M
3300009545\|Ga0105237_11506338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	679	Open in IMG/M
3300009792\|Ga0126374_10443017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	921	Open in IMG/M
3300009792\|Ga0126374_10460674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	906	Open in IMG/M
3300009792\|Ga0126374_11725916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300010043\|Ga0126380_11075003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	684	Open in IMG/M
3300010046\|Ga0126384_10346239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1237	Open in IMG/M
3300010047\|Ga0126382_10170423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1515	Open in IMG/M
3300010358\|Ga0126370_10595812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	953	Open in IMG/M
3300010359\|Ga0126376_11870270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300010360\|Ga0126372_10784652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	942	Open in IMG/M
3300010361\|Ga0126378_10102482	All Organisms → cellular organisms → Bacteria → Proteobacteria	2828	Open in IMG/M
3300010361\|Ga0126378_10490202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1344	Open in IMG/M
3300010366\|Ga0126379_11289930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	836	Open in IMG/M
3300010398\|Ga0126383_10017856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5362	Open in IMG/M
3300010398\|Ga0126383_10038139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3892	Open in IMG/M
3300010398\|Ga0126383_10210562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1875	Open in IMG/M
3300012212\|Ga0150985_102462086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	840	Open in IMG/M
3300012212\|Ga0150985_120908351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	816	Open in IMG/M
3300012360\|Ga0137375_11165349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	593	Open in IMG/M
3300012685\|Ga0137397_11170759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300012924\|Ga0137413_11248044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300012924\|Ga0137413_11530869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300012957\|Ga0164303_10366182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	877	Open in IMG/M
3300012971\|Ga0126369_11247901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	833	Open in IMG/M
3300012984\|Ga0164309_10147606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1559	Open in IMG/M
3300012989\|Ga0164305_11397721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	616	Open in IMG/M
3300013306\|Ga0163162_11350517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	810	Open in IMG/M
3300014326\|Ga0157380_10792867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	963	Open in IMG/M
3300014326\|Ga0157380_11090233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	837	Open in IMG/M
3300014968\|Ga0157379_10323280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1409	Open in IMG/M
3300014969\|Ga0157376_12021243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300015195\|Ga0167658_1005710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4229	Open in IMG/M
3300015371\|Ga0132258_10361088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3595	Open in IMG/M
3300015373\|Ga0132257_101372514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	899	Open in IMG/M
3300016319\|Ga0182033_11919008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	539	Open in IMG/M
3300016341\|Ga0182035_10036587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3225	Open in IMG/M
3300016404\|Ga0182037_10031755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3368	Open in IMG/M
3300016445\|Ga0182038_10546213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	994	Open in IMG/M
3300016445\|Ga0182038_11373667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300018060\|Ga0187765_10283159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	988	Open in IMG/M
3300018482\|Ga0066669_10738603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	868	Open in IMG/M
3300019458\|Ga0187892_10582394	Not Available	500	Open in IMG/M
3300021432\|Ga0210384_11455263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300021476\|Ga0187846_10091780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1312	Open in IMG/M
3300025927\|Ga0207687_10108062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2059	Open in IMG/M
3300025941\|Ga0207711_10276729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1545	Open in IMG/M
3300026088\|Ga0207641_11735330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300026089\|Ga0207648_11462722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	642	Open in IMG/M
3300026325\|Ga0209152_10130245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	958	Open in IMG/M
3300030829\|Ga0308203_1025178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300030902\|Ga0308202_1052022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	754	Open in IMG/M
3300031545\|Ga0318541_10147329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1290	Open in IMG/M
3300031546\|Ga0318538_10059513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1891	Open in IMG/M
3300031561\|Ga0318528_10673795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300031682\|Ga0318560_10337700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	813	Open in IMG/M
3300031720\|Ga0307469_12480842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300031740\|Ga0307468_100959580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	748	Open in IMG/M
3300031768\|Ga0318509_10185317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1155	Open in IMG/M
3300031805\|Ga0318497_10670463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300031879\|Ga0306919_11377147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300031893\|Ga0318536_10081463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Casimicrobiaceae → Casimicrobium → Casimicrobium huifangae	1606	Open in IMG/M
3300031910\|Ga0306923_10152279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2640	Open in IMG/M
3300031946\|Ga0310910_10981492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300032001\|Ga0306922_10161488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2399	Open in IMG/M
3300032010\|Ga0318569_10530140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300032043\|Ga0318556_10369685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	750	Open in IMG/M
3300032060\|Ga0318505_10079805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1455	Open in IMG/M
3300032091\|Ga0318577_10391995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	663	Open in IMG/M
3300032091\|Ga0318577_10422880	Not Available	636	Open in IMG/M
3300032261\|Ga0306920_100000321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	55503	Open in IMG/M
3300032783\|Ga0335079_11879406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300033433\|Ga0326726_10745055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	947	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.19%
Host-Associated	Host-Associated	19.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.19%
Plants	Host-Associated → Plants	19.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.49%
Cave	Environmental → Terrestrial → Cave	1.89%
Peat	Environmental → Terrestrial → Peat	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.43%
Loam	Environmental → Terrestrial → Soil → Loam	16.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.89%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.89%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.89%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.94%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.94%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.94%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.94%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.94%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.94%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
soilH2_103243282	3300003324	Sugarcane Root And Bulk Soil	MHRLFGLLAVAAAALGLFLLFAPVPETGGAGAPPLNAAPVAYGGWALGLVMGLALAWLAGVDWSTLPERAVAWFRLQRRRLWLAALGGVFAGILLLF*
Ga0062589_1017199662	3300004156	Soil	PMHRLFGLLALTAAALGLYLLFGPEAGPRTGGVGIESAPIAYSGWALGLVMGLALAWLAGVDWSSLPVRAVTWVRLQRRRLWWAMLGSVFAGILLLF*
Ga0062595_1006626092	3300004479	Soil	LFGPDAEPRGPGMQAMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVLWVRLQRRRLWLAVLGSVFASILLLF*
Ga0008092_112868671	3300004629	Tropical Rainforest Soil	MHRLFGLLAVMAAGLGIYLLFSPDAAPSGAGKTLASAPVAYSGWALGLLMGLALAWLASINWSTVPARVVTWVKLQRRRLWLALLGGICAGILVLF*
Ga0066688_105408032	3300005178	Soil	MHRMFGLLALMAAGLGLYLLFGPDAEPRGSGMQAMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVLWVRLQRRRLWLAVLGSVFASILLLF*
Ga0070670_1019749161	3300005331	Switchgrass Rhizosphere	MHRLFGLLALMAAGLGLYLLFGPESEPRIGGAGIESAPIAYSGWALGLVMGLALAWLARIDWSTLPVRIITWVRLQRRRLWWAMLGSVFAGILLLF*
Ga0066388_1001530812	3300005332	Tropical Forest Soil	MHRLFGLLAVMAAALGLYLLFPAGEPRGADKALESMPVAYSGWALGLVMGLVLAWLASVDWSTLPLRVITWVRVQRRRLWLALLGGICAGILLLF*
Ga0066388_1003648993	3300005332	Tropical Forest Soil	MRRLFALMAMTAAALGLYLLFGADAEPRGAAKALENTPLAYGGWALGLVMGLALAWLASIDWFTLPVRALTWVRLQRRRLWLAILAGLCAGILVLF*
Ga0066388_1004000564	3300005332	Tropical Forest Soil	MRRLFGLLAMMAAVFGLFLLFGPDAEPRGAGRALDPTPVAYSGWALGLLMGLALAWLAGVDWSSLPVRAITWVGLQRRHLWFVLLGGLCAGILVLF*
Ga0066388_1036475682	3300005332	Tropical Forest Soil	MHRLFGLLAVMAAGVGIYLLFDAAPSGVGKIIDGTPLAQSGWALGLLTGLALAWLASINWSTMPARVVTWVRLQRRRLWLALLGGVCAGILVLF*
Ga0066388_1045027461	3300005332	Tropical Forest Soil	MAAALGLYLLFGPDEPRGVGKALDSAPIAYSGWALGLLMGLTLAWLAGINWSTLPARVVTWVKLQRRRLWLALLGGVCAGILVLF*
Ga0066388_1065812421	3300005332	Tropical Forest Soil	MHRLFGLLAVMAAGLGLYLLFDAAPSGVGKALDGAPVGYSGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLALLGGVCAGILVLF*
Ga0070688_1003451601	3300005365	Switchgrass Rhizosphere	MHRLFGLLALTAAALGLYLLFGPEAGPRTGGVGIESAPIAYSGWALGLVMGLALAWLAGVDWSSLPVRAVTWVRLQRRRLWWAMLGSVFAGILLLF*
Ga0070688_1014350282	3300005365	Switchgrass Rhizosphere	PMHRLFGLLALMAAGLGLYLLFGPESEPRIGGAGIESAPIAYSGWALGPVMGLPLAWVARIDWSTLPVRIITWVRLQRRRLWWAMLGSVFAGILLLF*
Ga0070709_107477841	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MHRLFGLLAVMAAGLGVYLLFGADAGPSGPGKALDSAPVAYSGWALGLLMGLTLAWLANINWSTVPARVITWVRLQRRRLWLALLGGICAGILVLF*
Ga0070741_10000729101	3300005529	Surface Soil	MHRLFGLMALAAAAIGLYLLFGPDAGPTGATSVGAETAPVTYGGWALGLIMGLVLAFLARVDWATLPARVVAWIRLQRRRLWLAMLGGVFAGILLLF*
Ga0068857_1008400621	3300005577	Corn Rhizosphere	LYLLFGPEAGPRTGGVGIESAPIAYSGWALGLVMGLALAWLAGVDWSSLPVRAVTWVRLQRRRLWWAMLGSVFAGILLLF*
Ga0068854_1009970831	3300005578	Corn Rhizosphere	MHRMFGLLALMAAGLGLYLLFGPDAEPRGSGMQAMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVLGVRLQRRRLWLAVLGSVFASILLLF*
Ga0070702_1004793841	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MHRLFGLLALMAAGLGLYLLFGPDLEPKGSGMQGLSNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVMWVRLQRRRLWLAVLGSVFATILLLF*
Ga0066905_1000524163	3300005713	Tropical Forest Soil	MHRLFALLAIMAAALGLYLLFGPDEPRGAGKALDSAPIAYSGWALGLLMGLTLAWLAGINWSTLPARVVTWVKLQRRRLWLALLGGV
Ga0066905_1020567142	3300005713	Tropical Forest Soil	VGIYLLFDAAPSGVGKIIDGTPLAQSGWALGLLTGLALAWLASINWSTMPARVVTWVRLQRRRLWLALLGGVCAGILVLF*
Ga0066903_1000078765	3300005764	Tropical Forest Soil	MRRLFGLMAVTAAALGLYLLFGPDAEPSGAGKALESAPAAYGGWALGLVMGLALAWLASIDWFTLPVRAITWVRLQRRRLWLALLAGLCAGILVLF*
Ga0066903_1000433533	3300005764	Tropical Forest Soil	MHRLFALLAIMAAALGLYLLFGPDEPRGAGKALDGAPIAYSGWALGLLMGLTLAWLAGINWSTLPARVVTWVKLQRRRLWLALLGGVCAGILVLF*
Ga0066903_1002754344	3300005764	Tropical Forest Soil	MHRLFGLMAVMAAALGLYLLFGPAGGPRGADKALDSVPVAYSGWALGLVMGLVLAWLASVDWSNLPMRVIAWVRVQRRRLWLALLGGICAGILLLF*
Ga0066903_1016726522	3300005764	Tropical Forest Soil	MHRLFGLLAVMAAGLGLYLLFDAAPSGAGKALDGAPVAYSGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLALLGSVCAGILVLF*
Ga0066651_106157911	3300006031	Soil	MHRMFGLLALMAAGLGLYLLFGADPEPRGSGMQAMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVLWVRLQRRRLWLAVLGSVFASILLLF*
Ga0070716_1005006432	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MHRLFGLLAVMAAGLGVYLLFGADAGPSGPGKALDSAPVAYSGWALGLLMGLTLAWLANINWSTVPARVITWVRRQRRRLWLALLGGICAGILVLF*
Ga0066658_100412963	3300006794	Soil	MHRMFGLLALMAAGLGLYLLFGADPEPKGSGMQAMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVLWVRLQRRRLWLAVLGSVFASILLLF*
Ga0066659_110487022	3300006797	Soil	MHRIFGLLALMAAGLGLYLLFGPDAEPRGSGMQAMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVLWVRLQRRRLWLAVLGSVFASILLLF*
Ga0075424_1007123272	3300006904	Populus Rhizosphere	MHRMFGLLALMAAGLGLYLLFGPDAEPRGSGMQAMHNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVLWVRLQRRRLWLAVLGSVFASILLLF*
Ga0074063_134172022	3300006953	Soil	LGLYLLFGPDLEPKGSGMQGLSNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVMWVRLQRRRLWLAVLGSVFATILLLF*
Ga0111539_110566002	3300009094	Populus Rhizosphere	MHRMFGLLALMAAGLGLYLLFGTDAEPRGSGMQAMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVLWVRLQRRRLWLAVLGSVFASILLLF*
Ga0105245_104265702	3300009098	Miscanthus Rhizosphere	MHRMFGLLALMAAGLGLYLLFGPDAEPRGPGMQAMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVLWVRLQRRRLWLAVLGSVFASILLLF*
Ga0105248_102901412	3300009177	Switchgrass Rhizosphere	MHRMFGLLALMAAGLGLYLLFGPDAEPRGSGMQAMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARLVLWVRLQRRRLWLAVLGSVFASILLLF*
Ga0105237_115063381	3300009545	Corn Rhizosphere	MHRLFGLLALTAAALGLYLLFGPEAGPRTGGVGIESVPIAYSGWALGLVMGLALAWLAGVDWSSLPVRAVTWVRLQRRRLWWAMLGSVFAG
Ga0126374_104430171	3300009792	Tropical Forest Soil	MHRQFGLLAVMAAGVGIYLLFDAAPSGVGKIIDGTPLAQSGWALGLLTGLALAWLASINWSTMPAQVVTWVRLQRRRLWLALLGGVCAGILVLF*
Ga0126374_104606741	3300009792	Tropical Forest Soil	MRRLFGLMAVTAAALGLYLLFGPDAEPSGAGKALESAPVAYGGWALGLVMGLALAWLASIDWFTLPVRAITWVRLQRRRLWLALLAGVCAGILVLF*
Ga0126374_117259162	3300009792	Tropical Forest Soil	MHRLFGLLAVMAAGLGLYLLFDAAPSGAGKALDGAPVGYSGWALGLLMGLALAWLASINWSTVPARAVTWVRLQRRRLWLALLGGICAGILVLF*
Ga0126380_110750031	3300010043	Tropical Forest Soil	MHRLFGLLAVMAAGLGVYLLFADTAPSGPGKALDNAPIAYSVWALGLLMGLTLAWLASINWSTVPARIVTWVRLQRRRLW
Ga0126384_103462391	3300010046	Tropical Forest Soil	MHRLFGLLAVMAAGVGIYLLFDAAPSGVGKIIDGTPLAQSGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLALLGGVCAGILVLF*
Ga0126382_101704232	3300010047	Tropical Forest Soil	MHRLFGLLAVMAAGLGLYLLFDAAPNGAGKALDGAPVAYSGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLALLGGVCAGILVLF*
Ga0126370_105958122	3300010358	Tropical Forest Soil	MHRLFGLLAVMAAGLGLYLLFDAAPSGAGKALDGAPVAYSGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLALLGGVCAGILVLF*
Ga0126376_118702701	3300010359	Tropical Forest Soil	MRRLFGLLAVTAAALGCYLLLGPDADPRGARALETAPVAYGGWALGLVMGLALAWLASIDWFTLPVRAITWVRLQRRRVWLAVLGGVCAGILVLF*
Ga0126372_107846523	3300010360	Tropical Forest Soil	AALGLYLLFGPAGGPRGADKALDSVPVAYSGWALGLVMGLVLAWLASVDWSNLPMRVIAWVRVQRRRLWLALLGGICAGILLLF*
Ga0126378_101024821	3300010361	Tropical Forest Soil	MRRLFGLLAVTAAALGCYLLLGPDADPRGARALETAPVAYGGWALGLVMGLALAWLASIDWFTLPVRAITWVRLQRRRLWLALLAGLCAGILVLF*
Ga0126378_104902022	3300010361	Tropical Forest Soil	MHRLFGLLAVMAAGLGLYLLFDAAPSGAGKALDGAPVGYSGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLALLGSVSAGILVLF*
Ga0126379_112899301	3300010366	Tropical Forest Soil	MHRLFGLLAVMAAGLGLYLLFDAAPSGAGKALDGAPVGYSGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLALLGSVCAGILVLF*
Ga0126383_100178564	3300010398	Tropical Forest Soil	MRRLFGLMAVTAAALGLYLLFGPDAEPSGAGKALESAPVAYGGWALGLVMGLALAWLASIDWFTLPVRAITWVRLQRRRLWLALLAGLCAGILVLF*
Ga0126383_100381394	3300010398	Tropical Forest Soil	MRRLFGLLAVTAAALGCYLLLGPDADPRGARALETAPVAYGGWALGLVMGLALAWLASIDWFTLPVRAITWVRLQRRRLWLAVLGGVCAGILVLF*
Ga0126383_102105622	3300010398	Tropical Forest Soil	MHRLFGLLAVMAAGLGLYLLFDTAPSGAGKALDDAPVGYSGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLALLGSVCAGILVLF*
Ga0150985_1024620861	3300012212	Avena Fatua Rhizosphere	PAADTDRVGILPIGMQRKGGPMHRLLGLLALMAAGLGLYLLFGPEAEPRASGMGMESAPIAYSGWALGLVMGLALAWLAGVDWSNLPERIVTWVRMQRRRLWLAVLGSVFASILLLF*
Ga0150985_1209083512	3300012212	Avena Fatua Rhizosphere	LLALMAAGLGLYLLFGADPEPRGSGMQAMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVLWVRLQRRRLWLAVLGSVFASILLLF*
Ga0137375_111653491	3300012360	Vadose Zone Soil	MHRLFGLLAVMAAGLGLYLLFGADAEPKAAGMQALDGTPMAYSGWALGLVMGLTLAWLAGVDWSNLPTRVVMWVRLQRRRLWLAVLGSVFASILLLF*
Ga0137397_111707592	3300012685	Vadose Zone Soil	LFGPEAEPRAGGLQGLESAPIAYSGWALGLVMGLTLAWLAGVDWSNLPARVVMWVRLQRRRLWLAVLGSVFASILLLF*
Ga0137413_112480441	3300012924	Vadose Zone Soil	MHRLFGLLALLAAGLGLYLLFGPEAEPRAGGMQALESAPIAYGGWALGLIMGLALAWLAGVDWSNLPARVVMWVRLQRRRLWLALLGSVFASILLLF*
Ga0137413_115308691	3300012924	Vadose Zone Soil	MHRLFGLLAVVSAGLGMYLLLGPEAEPNAGGPQGLASAPIAYSGWALGLVMGLALAWLAGVDWSNLPARMVMWVRLQRRRLWLAVLGSVFASILLLFGGDAPGAGSPAD
Ga0164303_103661821	3300012957	Soil	MHRLFGLLALMAAGLGLYLLFGPESEPRIGGAGIESVPIAYSGWALGLVMGLALAWLARIDWSNLPVGIITWVRLQRRRLWWVMLGSVFAGILLLF*
Ga0126369_112479011	3300012971	Tropical Forest Soil	MAVMAAALGLYLLFGPAGGPRGADKALDSVPVAYSGWALGLVMGLVLAWLASVDWSNLPMRVIAWVRVQRRRLWLALLGGICAGILLLF*
Ga0164309_101476062	3300012984	Soil	MHRMFGLLALMAAGLGLYLLFGPYAEPRGSGMQAMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVLWVRLQRRRLWLAVLGSVFASILLLF*
Ga0164305_113977212	3300012989	Soil	MHRLFGLLALMAAGLGLYLLFGPESEPRIGGAGIESAPIAYSGWALGLVMGLALAWLARIDWSNLPVRIITWVRLQRRRLWWAMLGSVFAGILLLF*
Ga0163162_113505172	3300013306	Switchgrass Rhizosphere	MHRMFGLLALMAAGLGLYLLFGPDAEPRGSGMQGLSNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVMWVRLQRRRLWLAVLGSVFATILLLF*
Ga0157380_107928672	3300014326	Switchgrass Rhizosphere	LGLYLLFGPDLEPKGSGIQGLSNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVMWVRLQRRRLWLAVLGSVFATILLLF*
Ga0157380_110902331	3300014326	Switchgrass Rhizosphere	MHRMFGLLALMAAGLGLYLLFGPDAEPRGSGMQAMQNAPVAYSCWALGLVMGLTLAWLAGVDWSNLPARLVLWVRLQRRRLWLAVLGSVFASILLLF*
Ga0157379_103232801	3300014968	Switchgrass Rhizosphere	MHRLFGLLALTAAALGLYLLFGPEAGPRTGGVGIESAPIAYSGWALGLVMGLALAWLAGVDWSSLPVRAVTWVRLQRRRLWWAMLGSVFACILLLF*
Ga0157376_120212431	3300014969	Miscanthus Rhizosphere	MHRLFGLLALTAAALGLYLLFGPEAGPRTGGVGIESAPIAYSGWALGLVMGLALAWLAGVDWSSLPVRAVTWVRLQRRRLWWAMLGRVFA
Ga0167658_10057101	3300015195	Glacier Forefield Soil	ILAVMAAGLGLFLLFGPEANPSRTGGMQGLESAPVAYSGWALGLVMGLALAWLAGVDWSNLPARVVTWVRLQRRRLWLAALGSVFASILLLF*
Ga0132258_103610882	3300015371	Arabidopsis Rhizosphere	MHRLFGLLAVMAAGLGVYLLFGVDAAPSGAGKTLNSAPVAYSGWALGLLMGLALAWLASINWSNLPMRVVTWVKLQRRRLWLALLGGVCAGILVLF*
Ga0132257_1013725142	3300015373	Arabidopsis Rhizosphere	AAGLGLYLLFGPDAEPRGSGMQAMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARLVLWVRLQRRRLWLAVLGSVFASILLLF*
Ga0182033_119190081	3300016319	Soil	MRRLFGLLAVTAAALGCYLLLGPDADPRGARALETAPVAYGGWALGLVTGLALAWLASIDWFTLPVRAITWVRLQRRRLWLAVL
Ga0182035_100365872	3300016341	Soil	MRRLFGLLAMTAAALGCYLLLGPDADPRGARALETAPVAYGGWALGLVTGLALAWLASIDWFTLPVRAITWVRLQRRRLWLAVLGGVCAGILVLF
Ga0182037_100317553	3300016404	Soil	MHRMFGLLAVMAAGLGVYLLFGVDAAPTGAGKALDGAPVAYGGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLVLLGGVCAGILVLF
Ga0182038_105462132	3300016445	Soil	MHRLFGLLAVMAAGLGVYLLFGVDAAPTGAGKALDGAPVAYGGWALGLLMGLALAWLASINWSTVPARVLTWVRLQRRRLWLVLLGG
Ga0182038_113736672	3300016445	Soil	MRRLFGLLAVTAAALGCYLLLGPDADPRGARALETAPVAYGGWAMGLIMGLALAWLTSIDWFTLPVRAITWVRLQRRRLWLAVLGGVCAGILVLF
Ga0187765_102831593	3300018060	Tropical Peatland	GLLAVMAAGLGVYLLFGVDAAPSGAGKALDGTPVAYSGWALGLLMGLALAWLASINWSTVPARVLTWVRLQRRRLWLVLLGGVCAGILVLF
Ga0066669_107386031	3300018482	Grasslands Soil	MHRMFGLLALMAAGLGLYLLFGPDAEPRGSMQAMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVLWVRLQRRRLWLAVLGSVFASILLLF
Ga0187892_105823941	3300019458	Bio-Ooze	MHRLFVLLALGAAGLGLWVLLAGPDAEPLERGTRALSLAPVAYSGWAAGLLMGLALAWLATVEWRDLPARVGGWVRLQRRRLGLVVLGGVFAGVLLL
Ga0210384_114552631	3300021432	Soil	FGLLAVMAAGLGVYLLFGADAGPSGPGKALDSAPVAYSGWALGLLMGLTLAWLANINWSTVPARVITWVRLQRRRLWLALLGGICAGILVLF
Ga0187846_100917801	3300021476	Biofilm	MHRLFGLLAMIAALFGLYLLFGPDAEPRGAGSGLDHAPVALSGWALGLLMGLALAWLAGVDWSTLSVRVVTWVRLQRRRLWL
Ga0207687_101080623	3300025927	Miscanthus Rhizosphere	MHRMFGLLALMAAGLGLYLLFGPDAEPRGSGMQAMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVLWVRLQRRRLWLAVLGSVFASILLLF
Ga0207711_102767292	3300025941	Switchgrass Rhizosphere	MHRMFGLLALMAAGLGLYLLFGPDAEPRGSGMQAMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARLVLWVRLQRRRLWLAVLGSVFASILLLF
Ga0207641_117353301	3300026088	Switchgrass Rhizosphere	LLALTAAALGLYLLFGPEAGPRTGGVGIESAPIAYSGWALGLVMGLALAWLAGVDWSSLPVRAVTWVRLQRRRLWWAMLGSVFAGILLLF
Ga0207648_114627221	3300026089	Miscanthus Rhizosphere	SHVQATGTQRKGEPMHRLFGLLALTAAALGLYLLFGPEAGPRTGGVGIESAPIAYSGWALGLVMGLALAWLAGVDWSSLPVRAVTWVRLQRRRLWWAMLGSVFAGILLLF
Ga0209152_101302453	3300026325	Soil	MHRMFGLLALMAAGLGLYLLFGPDAEPRGSGMQVMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVLWVRLQRRRLWLAVLGSVFASILLLF
Ga0308203_10251782	3300030829	Soil	PMHRMFGLLALMAAGLGLYLLFGADPEPRGSGMQAMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVLWVRLQRRRLWLAVLGSVFASILLLF
Ga0308202_10520222	3300030902	Soil	GLLAVMAAGLGLYLLFGADPEPRGSGMQAMQNAPVACSGWALGLVMGLTLAWLAGVDWSNLPARVVLWVRLQRRRLWLAVLGSVFASILLLF
Ga0318541_101473293	3300031545	Soil	MHRLFGLLAVMAAGLGVYLLFGVDAAPTGAGKALDGAPVAYGGWALGLLMGLALAWLASINWSTVPVRVVTWVRLQRRRLWLVLLGGVCAGILVLF
Ga0318538_100595133	3300031546	Soil	MHRLFGLLAVMAAGLGVYLLFGVDAAPTGAGKALDGAPVAYGGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLVLLGGVCAGILVLF
Ga0318528_106737952	3300031561	Soil	MHRLFGLLAVMAAGLGVYLLFGVDAAPTGAGKALDGAPVAYGGWALGLLMGLALAWLASINWSTVPARVLTWVRLQRRRLWLVLLGGVCAGILVLF
Ga0318560_103377001	3300031682	Soil	GGPMHRLFGLLAVMAAGLGVYLLFGVDAAPSGAGKALDGTPVAYSGWALGLLMGLALAWLASINWSTVPARVLTWVRLQRRRLWLVLLGGVCAGILVLF
Ga0307469_124808421	3300031720	Hardwood Forest Soil	MHRMFGLLALMAAGLVLYLLFGPDTEPRGSGMQAMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVLWVRLQRRRLWLAVLGSVFASILLLF
Ga0307468_1009595802	3300031740	Hardwood Forest Soil	MHRMFGLLALMAAGLGLYLLFGPDAEPKGSGMQAMQNAPVAYSGWALGLVMGLTLAWLAGVDWSNLPARVVLWVRLQRRRLWLAVLGSVFASILLLF
Ga0318509_101853173	3300031768	Soil	GPMHRLFGLLAVMAAGLGVYLLFGVDAAPSGAGKALDGTPVAYSGWALGLLMGLALAWLASINWSTVPARVLTWVRLQRRRLWLVLLGGVCAGILVLF
Ga0318497_106704631	3300031805	Soil	LSRGAEVGQMHRLFGLLAVMAAGLGVYLLFGVDAAPTGAGKALDGAPVAYGGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLVLLGGVCAGILVLF
Ga0306919_113771472	3300031879	Soil	MHRLFGLLAVMAAGLGVYLLFGVDAAPTGAGKTLDGAPVAYGGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLVLLGGVCAGILVLF
Ga0318536_100814632	3300031893	Soil	MHRLFGLLAVMAAGLGVYLLFGVDAAPTGAGKALDGAPVAYGGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLVLLGGVC
Ga0306923_101522791	3300031910	Soil	RLFGLLAVMAAGLGVYLLFGVDAAPTGAGKALDGAPVAYGGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLVLLGGVCAGILVLF
Ga0310910_109814921	3300031946	Soil	MHRLFGLLAVMAAGLGVYLLFGVDAAPSGAGKALDGTPVAYSGWALGLLMGLALAWLASINWSTVPARVLTWVRLQRRRLWLVLLGGVCAGILVLF
Ga0306922_101614881	3300032001	Soil	GQMHRLFGLLAVMAAGLGVYLLFGVDAAPTGAGKALDGAPVAYGGWALGLLMGLALAWLASINWSTVPVRVVTWVRLQRRRLWLVLLGGVCAGILVLF
Ga0318569_105301402	3300032010	Soil	VGQMHRLFGLLAVMAAGLGVYLLFGVDAAPTGAGKALDGAPVAYGGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLVLLGGVCAGILVLF
Ga0318556_103696851	3300032043	Soil	LLAVMAAGLGVYLLFGVDAAPTGAGKALDGAPVAYGGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLVLLGGVCAGILVLF
Ga0318505_100798051	3300032060	Soil	MHRLFGLLAVMAAGLAVAYGGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLVLLGGVCAGILVLF
Ga0318577_103919951	3300032091	Soil	GLGVYLLFGVDAAPTGAGKALDGAPVAYGGWALGLLMGLALAWLASINWSTVPARVVTWVRLQRRRLWLVLLGGVCAGILVLF
Ga0318577_104228801	3300032091	Soil	MHRLFGLLAVMAAGLGVYLLFGVDAAPTGAGKALDGAPVAYGGWALGLLMGLALAWLASINWSTVPVRVVTWVRLQRRR
Ga0306920_10000032110	3300032261	Soil	MRRLFGLLAVTAAALGCYLLLGPDADPRGARALETAPVAYGGWALGLVTGLALAWLASIDWFTLPVRAITWVRLQRRRLWLAVLGGVCAGILVLF
Ga0335079_118794061	3300032783	Soil	MHRLFGLLAMMAAVLGLYLLFGADADPSAATKALDSAPVAYSGWALGLLMGLALAWLASINWSTVPARVLTWVRLQRRRLWLALLGGICAGILVLF
Ga0326726_107450552	3300033433	Peat Soil	MHRLFGLLALMAAGLGLYLLFGPEAEPRAGALESAPVAYSGWALGLVMGLALAWLAGVDWSNLPVRVVTWVRLQRRRLWLALLGSVFASILLLF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094293

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences