Metagenome / Metatranscriptome Family F094288

Basic Information
Family ID	F094288
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	139 residues
Representative Sequence	TCSVNGGDTFQATRAVYTGEATSSDPRLAGALRIRAWSLVDTTNGVGHVFGVFHIRGTGTRAHGTLNAALSDGKASGLARGFVRHSWGRIVASLGATFDPSAGFSSGSLGGSTTGAGFIRSGRWCHPPHWPQS
Number of Associated Samples	93
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	31.25 %
% of genes near scaffold ends (potentially truncated)	20.75 %
% of genes from short scaffolds (< 2000 bps)	26.42 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Most Common Taxonomy
Group	Unclassified (69.811 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (18.868 % of family members)
Environment Ontology (ENVO)	Unclassified (25.472 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.774 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 46.58% Coil/Unstructured: 53.42%
Feature Viewer

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Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF01040	UbiA	35.85
PF00994	MoCF_biosynth	3.77
PF00005	ABC_tran	2.83
PF01966	HD	0.94
PF02602	HEM4	0.94
PF01967	MoaC	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0315	Molybdenum cofactor biosynthesis enzyme MoaC	Coenzyme transport and metabolism [H]	0.94
COG1587	Uroporphyrinogen-III synthase	Coenzyme transport and metabolism [H]	0.94

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
All Organisms	root	All Organisms	30.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
cellular organisms	root	All Organisms → cellular organisms	30.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.47 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5.66 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.83 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.94 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.83 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.94 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.83 %
Delftia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Delftia	0.94 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.83 %
unclassified Delftia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Delftia → unclassified Delftia	0.94 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.83 %
Delftia sp. RIT313	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Delftia → unclassified Delftia → Delftia sp. RIT313	0.94 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000953\|JGI11615J12901_10640807	All Organisms → cellular organisms → Bacteria → Terrabacteria group	749	Open in IMG/M
3300004479\|Ga0062595_100140269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1383	Open in IMG/M
3300004479\|Ga0062595_100527182	All Organisms → cellular organisms → Bacteria → Terrabacteria group	896	Open in IMG/M
3300005332\|Ga0066388_106276772	All Organisms → cellular organisms → Bacteria → Terrabacteria group	600	Open in IMG/M
3300005336\|Ga0070680_101070990	All Organisms → cellular organisms → Bacteria → Terrabacteria group	697	Open in IMG/M
3300005435\|Ga0070714_100173347	All Organisms → cellular organisms → Bacteria	1959	Open in IMG/M
3300005439\|Ga0070711_101463680	All Organisms → cellular organisms → Bacteria → Terrabacteria group	595	Open in IMG/M
3300005532\|Ga0070739_10061181	All Organisms → cellular organisms → Bacteria	2350	Open in IMG/M
3300005557\|Ga0066704_10229899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1258	Open in IMG/M
3300005559\|Ga0066700_10252901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1232	Open in IMG/M
3300005598\|Ga0066706_11125909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Delftia → unclassified Delftia → Delftia sp. RIT313	599	Open in IMG/M
3300005764\|Ga0066903_107580201	All Organisms → cellular organisms → Bacteria → Terrabacteria group	559	Open in IMG/M
3300006028\|Ga0070717_10348924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1323	Open in IMG/M
3300006173\|Ga0070716_100658329	All Organisms → cellular organisms → Bacteria → Terrabacteria group	795	Open in IMG/M
3300006854\|Ga0075425_100001469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	23184	Open in IMG/M
3300009093\|Ga0105240_11879771	All Organisms → cellular organisms → Bacteria → Terrabacteria group	623	Open in IMG/M
3300010133\|Ga0127459_1138602	All Organisms → cellular organisms → Bacteria → Terrabacteria group	570	Open in IMG/M
3300010152\|Ga0126318_10160323	All Organisms → cellular organisms → Bacteria → Terrabacteria group	510	Open in IMG/M
3300010362\|Ga0126377_12559541	All Organisms → cellular organisms → Bacteria → Terrabacteria group	586	Open in IMG/M
3300010376\|Ga0126381_101981197	All Organisms → cellular organisms → Bacteria → Terrabacteria group	839	Open in IMG/M
3300010398\|Ga0126383_12510334	All Organisms → cellular organisms → Bacteria → Terrabacteria group	600	Open in IMG/M
3300012923\|Ga0137359_11248508	All Organisms → cellular organisms → Bacteria → Terrabacteria group	631	Open in IMG/M
3300012972\|Ga0134077_10487765	All Organisms → cellular organisms → Bacteria → Terrabacteria group	544	Open in IMG/M
3300013296\|Ga0157374_11122604	All Organisms → cellular organisms → Bacteria → Terrabacteria group	807	Open in IMG/M
3300015373\|Ga0132257_104503346	All Organisms → cellular organisms → Bacteria → Terrabacteria group	507	Open in IMG/M
3300025917\|Ga0207660_11337205	All Organisms → cellular organisms → Bacteria → Terrabacteria group	581	Open in IMG/M
3300026308\|Ga0209265_1127341	All Organisms → cellular organisms → Bacteria → Terrabacteria group	643	Open in IMG/M
3300026547\|Ga0209156_10457069	All Organisms → cellular organisms → Bacteria → Terrabacteria group	528	Open in IMG/M
3300027773\|Ga0209810_1000742	All Organisms → cellular organisms → Bacteria	62458	Open in IMG/M
3300031198\|Ga0307500_10118748	All Organisms → cellular organisms → Bacteria → Terrabacteria group	728	Open in IMG/M
3300031939\|Ga0308174_10280900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1305	Open in IMG/M
3300033412\|Ga0310810_10182265	All Organisms → cellular organisms → Bacteria	2398	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.08%
Host-Associated	Host-Associated	17.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.13%
Plants	Host-Associated → Plants	17.92%
Aquatic	Environmental → Aquatic	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.72%
Freshwater	Environmental → Aquatic → Freshwater	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.38%
Loam	Environmental → Terrestrial → Soil → Loam	19.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.89%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.66%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.77%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.49%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.66%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.89%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010133	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300024286	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK28	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11615J12901_106408071	3300000953	Soil	AGVAAARGRAPSVQGASASFSAPTVTKKYQVTCSVTGGDTFQATRAVYRGQAASSDPRLAGALTIRAWSLVDTTNGVGHVYGVFHIKGEGTRAHGTLNAALANGKASGIARGFVRHNWGRIVVSLGSDFDPNAGFSTGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0062595_1001402691	3300004479	Soil	MSRKRLGLLGLLVVTIALVVAGVAAARGRAPSVQAATATFTATTVSQKYQVTCSVNGGDTFEGTRATYTGMAVSSDPRLAGELTIRAWSLVDMTSGVGHVYGVFHIKGVGAGAHGTLNAALSSGKASGLARGFVRHRHGRIVTSLGSTFDPNTGFSDGSLGGSTTGAGFIRSGRWCHPPHWPSS*
Ga0062595_1003344421	3300004479	Soil	RLTGALTIRAWSLVDTTNGVGHLFGQFRIKGTGRNLAHGTLNAAISGGNASGLARGFVRGRWGHVVASLGATFDPTAGFSSGSIGSSTVGAGFLRSGRWCHPPNWPGSQG*
Ga0062595_1005271822	3300004479	Soil	MSRKRLALLGVFVVAMALVAAGVAAARGRAPSVQSASATFTAPTVSQKYQVTCSVNGGDTFEATRATYTGTALSSDPRLAGELTIRAWSLVDTTNGVGHVFGIFQIRGVETRAHGTLNAALATGDASGIARGFVRHPWGRVVASLGATFDPDTGFSSGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0066395_104141681	3300004633	Tropical Forest Soil	RAMYTGTATSADPRLAGALTIRAWSLVDTTNGVGHLFGTFHIKGTGRNQAHGTLNAAISGGTASGLARGFVRGRWGHVVASLGATFDPTAGFSSGSIGSSTAGAGFLRSGRWCHPPNWPASNGS*
Ga0066679_102318631	3300005176	Soil	TGTATSADPRLAGALTIRAWSLIDTTNGVGHLFGEFRITGTGRNLAHGTLNAAISGGNASGLARGFVRGRWGHVVASLGATFDPTAGFSSGSIGSSTAGAGFLRSGRWCHPPHWPSS*
Ga0066684_102437702	3300005179	Soil	TCSVNGGDTFQATRAVYTGEATSSDPRLAGALRIRAWSLVDTTNGVGHVFGVFHIRGTGTRAHGTLNAALSDGKASGLARGFVRHSWGRIVASLGATFDPSAGFSSGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0066678_106494482	3300005181	Soil	TRAVYTGEATSSDPRLAGALRIRAWSLVDTTNGVGHVFGVFHIRGTGTRAHGTLNAALSDGKASGLARGFVRHSWGRIVASLGATFDPSAGFSSGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0066671_110766531	3300005184	Soil	QATRATYTGTATSADPRLAGALTIRAWSLIDTTNGVGHLFGEFRITGTGRNLAHGTLNAAISGGNASGLARGFVRGRWGHIVASLGSTFDPTAGFSSGSIGSSTAGAGFLRSGRWCHPPHWPSS*
Ga0066388_1062767721	3300005332	Tropical Forest Soil	APSVQSVSAEFNATTVTQRYLTTCSVNGGDTFQATRAMYTGTATSADPRLAGALTIRAWSLVDTTNGVGHLFGTFHIKGTDRNQAHGTLNAAISGGTASGLARGFVRGRWGHVVASLGATFDPTAGFSSGSIGSSTAGAGFLRSGRWCHPPNWPASNGS*
Ga0070680_1010709902	3300005336	Corn Rhizosphere	SVQAASATFAATTVSRESQVTCSVTGGDTFQATIATYTGTSSSSDPRLAGALRIRAWSLVDTTNGVGHVYGRFHIKGAGTRAHGTLNAALANGKASGIARGFVRHNWGRIVASLGSDFAPNAGFSQGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0068868_1006005771	3300005338	Miscanthus Rhizosphere	VTGGDTFQATRAVYRGLATSSDPRLAGAITIRAWSLVDTTNGVGHVYGVFRIKGAGTRAHGTLNAALANGKASGIARGFVRHNWGRIVVSLGSDFDPSTGFSTGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0068868_1010638101	3300005338	Miscanthus Rhizosphere	VSNKSQVTCSVTGGDTFQATIATYTGTSTSVDPRLAGALRIRAWSLVDTTNGVGHVFGRFHIIGAGTRAHGTLNAALASGKASGIARGFVRHTWGRIVASLGSDFDPNAGFSTGSIGGSTVGAGFIRSGRWCHPPHWPQS*
Ga0070660_1011099841	3300005339	Corn Rhizosphere	TKKYQVTCSVTGGDTFQATRAVYSGEATSSDPRLAGALTIRAWSLVDTTNGVGHVYGVFHIRGAGTRAHGTLNAALANGKASGIARGFVRHNWGRIVVSLGSDFDPNAGFSTGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0070691_110815101	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VSQHYLTTCSVNGGDTFQATRATYTGTAASADPRLAGALTIRAWSLVDTTNGVGHLFGEFRIRGTGRNLAHGTLNAAISGGNASGLARGFVRGRWGHIVASLGATFDPTAGFSSGSIGSSTAGAGFLRSGRWCHPPNWPSS*
Ga0070659_1009603842	3300005366	Corn Rhizosphere	NGGDTFQATRAKYTGTATSADPRLAGALTIRAWSLVDTTNGVGHLYGTFRIEGSGNQRAHGTLNAAISGGNASGLARGFVRGKWGHVVASLGAAFSPTAGFSSGSIGSSTVGAGFLRSGRWCHPPNWPAGQGA*
Ga0070714_1001733472	3300005435	Agricultural Soil	MSRKRLALLGVFVVAMALVAAGVAAARGRAPSVQSASATFMAPTVSQKYQVTCSVNGGDTFEATRATYTGTALSSDPRLAGELTIRAWSLVDTTNGVGHVFGIFQIRGVDTRAHGTLNAALATGDASGIARGFVRHPWGRVVASLGATFDPDTGFSSGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0070713_1014972702	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	QHSLTTCSVNGGDTFQATRATYTGTATSPDPRLSGALTIWAWSLVDTTNGVGHLFGNFRIVGAGVNRAHGTLNAAISGGNASGLARGFVRGKWGHVVASLGATFDPVTGFSSGSIGSSTVGAGFLRSGRWCHPAGWPGSKGA*
Ga0070710_108114271	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VSNLSQVTCSVTGGDTFQATKATYTGTSTSTDPRLAGALTIHAWSLVDTTNGVGHVFGDFRIKGPGTAAHGTLNGAIANGEASGIARGFVRHDWGRIVASMGSSFDPSAGFSNGSLGGATAGAGFIRSGQWCTPPHWPKS*
Ga0070711_1014636801	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSRKRLALLGVFVVAMALVAAGVAAARGRAPSVQSASATFMAPTVSQKYQVTCSVNGGDTFEATRATYTGTALSSDPRLAGDLTIRAWSLVDTTNGVGHVFGIFQIRGVDTRAHGTLNAALATGDASGIARGFVRHPWGRVVASLGATFDP
Ga0070663_1010891561	3300005455	Corn Rhizosphere	VDPRLAGALRIRAWSLVDTTNGVGHVFGRFHIIGAGTRAHGTLNAALASGKASGIARGFVRHKWGRIVASLGSDFDPNAGFSTGSIGGSTVGAGFIRSGRWCHPPHWPQS*
Ga0070698_1004755412	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	TTCSVNGGDTFQATRAMYTGTATSADPRLAGALTIRAWSLVDTTNGVGHLFGTFHIKGTNRNQAHGTLNAAISGGTASGLARGFVRGRWGHVVASLGATFDPTAGFSSGSIGSSTAGAGFLRSGRWCHPPNWPASNGS*
Ga0070739_100611812	3300005532	Surface Soil	MSRKRFALLGLFVAAALVSVGVAAAHGRQPSVQSATATFNATTVAQKYQATCSVNGGDSFQATRAVYTGTSTSTDPRLAGALTIRAWSLVDTTNGVGHVYGHFRIVGTGTRAHGTLNAALSDGKASGIARGFLRHEWGRIVASLGATFDPNVGFSSGSLGGSTSGAGFVRSGRWCHPPNWPQP*
Ga0066704_102298991	3300005557	Soil	MSRKRLALLGVFVVAMALVAAGVAAARGRAPSVQSASATFTAPTVSQKYQVTCSVNGGDTFEATRATYTGTALSSDPRLAGELTIRAWSLVDTTNGVGHVFGIFQIRGVDTRAHGTLNAALATGDASGIARGFVRHPWGRLVASLGATFDPDTGFSSGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0066700_102529012	3300005559	Soil	MSRKRLALLGVFVVAMALVAGGVAAARGRAPSVQSASATFTAPTVSQKYQVTCSVNGGDTFEATRATYTGTALSSDPRLAGELTIRAWSLVDTTNGVGHVFGIFQIRGVDTRAHGTLNAALATGDASGIARGFVRHPWGRVVASLGATFDPDTGFSSGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0066703_103114282	3300005568	Soil	TVSQKYQVTCSVNGGDTFEATRATYAGAAQSSDPRLAGTLTTRAWSLVDTTNGVGHVFGIFQIRGVDTRAHGTLNAALATGDASGIARGFVRHPWGRLVASLGATFDPDTGFSSGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0066703_108238451	3300005568	Soil	QVTCSVNGGDTFQATRAVYTGEATSSDPRLAGALRIRAWSLVDTTNGVGHVFGVFHIRGTGTRAHGTLNAALSDGKASGLARGFVRHSWGRIVASLGATFDPSAGFSSGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0066654_107580511	3300005587	Soil	SQVTCSVTGGDTFQATIATYTGAASSSDPRLAGALRIRAWSLVDTTNGVGHVFGEFHIKGAGTRAHGTLNAALADGKASGIARGFVRNDWGRIVASLGSDFSPNAGFSTGSLGGSTTGAGFIRSGQWCHPPNWPRS*
Ga0066706_106935992	3300005598	Soil	DVSQLSQVTCSVTGGDTFQATKATYRGTSLSSDPRLAGALTIRAWSLVDTTNGVGHVFGNFRIKGPGTRAHGTLNGAIANGEASGIARGFVRHQWGRIVASMGSTFNPNTGFSTGSLGGSTVGAGFIRSGRWCAPPHWPQS*
Ga0066706_111259091	3300005598	Soil	MSRKRLALMGLVVVAALTAVGVAAARGKGTSVQAASATFSATNVSRLNQVTCSVTGGDTFQATRAVYKGESLSNDPRLVGALTIRAWSLVDTSNGVGHVYGLFRIKGPGTRAHGTLNAALANGEASGIARGFVRHEGGRIVASLGSTFNPNAGFSTGSLGGSTVGAGFIRSGRWCAPPNWPRS*
Ga0066903_1070293601	3300005764	Tropical Forest Soil	VTQRYLTTCSVNGGDTFQATRAMYTGTATSADPRLAGALTIRAWSLVDTTNGVGHLFGNFQIKGTGRNQAHGTLNAAISGGTASGLARGFVRGRWGHVVASLGATFDPTAGFSSGSIGSSTAGAGFLRSGRWCHPPNWPASAGS*
Ga0066903_1070541971	3300005764	Tropical Forest Soil	RLAGTLTIRAWSLVDTTNGVGHLFGFFRIVGSGNTRAHGTLNAAIAGGNASGLARGFVRGKWGHVVASLGSGFDPTAGFSSGSIGSSTVGAGFLRSGRWCHPAGWPGSNGA*
Ga0066903_1075802011	3300005764	Tropical Forest Soil	ATAHRGAPSVQAVSAEFNATTVTQRYLTTCSVNGGDTFQATRAMYTGTATSADPRLAGALTIRAWSLVDTTNGVGHLFGTFNIKGAGRNQAHGTLNAAISGGSASGLARGFVRGRWGHVVASLGATFDPTAGFSSGSIGSSTAGAGFLRSGRWCHPPNWPASNGS*
Ga0070717_103489241	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSRKRLALLGVFVVAMALVAAGVAAARGRAPSVQSASATFMAPTVSQKYQVTCSVNGGDTFEATRATYTGTALSSDPRLAGDLTIRAWSLVDTTNGVGHVFGIFQIRGVDTRAHGTLNAALDSGQASGIARGFVRHQWGRIVASLGSTFDPNTGFSSGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0066656_110548401	3300006034	Soil	TCSVTGGDTFQATIATYTGTSTSVDPRLAGALRIRAWSLVDTTNGVGHVFGLFRIRGAGTRAHGTLNAALAGGKASGIARGFVRHRWGRIVASLGSTFDPNAGFSTGSLGGSTAGAGFIRSGRWCHPSHWPQS*
Ga0070716_1006583292	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSRKRFALLGVVVAAALTAVGVAAAHRGAPSVQSVTATFDATTVTQHYLTTCSVNGGDTFQATRAVYTGTAASSDPRLAGDLTIRAWSLVDTTNGVGHLFGTFRIKGTGNNRAHGTLNAAISGGKASGLARGFTRGPWGHVVASLGATFDPVAGFSSGSIGSGTAGAGFLRSGRWCHPRNWPASSGS*
Ga0070712_1007046871	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GGDTFQATIATYTGTSTSVDPRLAGALRIRAWSLVDTTNGVGHVFGRFHITGAGTRAHGTLNAALASGKASGIARGFVRHKWGRIVASLGSDFDPNAGFSTGSIGGSTVGAGFIRSGRWCHPPNWPQS*
Ga0070712_1013083831	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ATRAKYTGTATSADPRLAGALTIRAWSLVDTTNGVGHLYGTFRIEGSGNQRAHGTLNAAISGGNASGLARGFVRGKWGHVVASLGAAFSPTAGFSSGSIGSSTVGAGFLRSGRWCHPPNWPAGQGA*
Ga0079222_110143651	3300006755	Agricultural Soil	ATRATYTGTATSADPRLTGALTIRAWSLVDTTNGVGHLFGRFRIKGTGRNLAHGTLNAAISGGTASGLARGFVRGRWGHIVASLGATFDPTAGFSSGSIGSSTTGAGFLRSGRWCHPPNWPSS*
Ga0066653_106839171	3300006791	Soil	SVTGGDTFQATIATYTGTSTSADPRLAGALRIRAWSLVDTTNGVGHVFGRFYIKGAGTRAHGTLNAALASGKASGIARGFVRHKWGRIVASLGSDFDPNAGFSTGSIGGSTIGAGFIRSGRWCHPPHWPQS*
Ga0066660_115919731	3300006800	Soil	TSSDPRLAGALRIRAWSLVDTTNGVGHVFGVFHIRGTGTRAHGTLNAALSDGKASGLARGFVRHSWGRIVASLGATFDPSAGFSSGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0075425_10000146929	3300006854	Populus Rhizosphere	ASATFNAPTVSNKSQVTCSVTGGDTFQATIATYTGASLSTDPRLAGALRIRAWSLVDTTNGVGHVFGRFHIIGAGTRAHGTLNAALASGKASGIARGFVRHKWGRIVASLGSDFDPNAGFSTGSIGGSTVGAGFIRSGRWCHPPNWPQS*
Ga0105240_118797711	3300009093	Corn Rhizosphere	MAAGVAAARGRAPTVQGASASFSAPTVTKKYQVTCSVTGGDTFQATRAVYSGEATSSDPRLAGALTIRAWSLVDTTNGVGHVYGVFHIRGAGTRAHGTLNAALANGKASGIARGFVRHKWGRIVVSLGSDFDPNTGFSMGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0105248_104302151	3300009177	Switchgrass Rhizosphere	DTFQATRAVYRGLATSSDPRLAGAITIRAWSLVDTTNGVGHVYGVFRIKGAGTRAHGTLNAALANGKASGIARGFVRHTWGRIVASLGSDFDPNAGFSTGSIGGSTVGAGFIRSGRWCHPPHWPQS*
Ga0126384_116968142	3300010046	Tropical Forest Soil	FNATTVTQRYLTTCSVNGGDTFQATRAMYTGTATSADPRLAGALTIRAWSLVDTTNGVGHLFGTFNIKGAGRNQAHGTLNAAISGGSASGLARGFVRGRWGHVVASLGATFDPTAGFSSGSIGSSTAGAGFLRSGRWCHPAGWPGSNGA*
Ga0126373_117212591	3300010048	Tropical Forest Soil	SSADPRLGGVLTIHAWSLVDTTNGVGHLYGTFRINGAGKNRAHGTLNAAIAGGQASGIARGWTGGPWGHLVASLGSTFDPTAGFSSGSIGSGTAGAGFLRSGRWCHPPNWPASSGS*
Ga0127459_11386021	3300010133	Grasslands Soil	AASATFAAATVSNKSQVTCSVSGGDTFQATIATYTGASSSSDPRLAGALRIRAWSLVDTTNGVGHVFGIFHINGAGTRAHGTMNAALAGGKASGIARGFVRHQWGRIVASLGSDFDPNAGFSSGSLGGSTTGAGFIRSGRWCHPPNWPRS*
Ga0126318_101603231	3300010152	Soil	SADFAAATVSNLSQVTCSVTGGDTFQATRATYTGEASSNDPRLAGALTIRAWSLVDTSNGVGHVYGIFHIKGAGTRAHGTLNAALANGKASGIARGFVKHRWGRIVASLGSTSDPNTGFSAGSLGGSTTGAGFIRSGRWCHPPHWPQG*
Ga0134084_100443231	3300010322	Grasslands Soil	QVTCSVTGGDTFQATIATYTGTSTSADPRLAGALRIRAWSLVDTTNGVGHVFGRFYIKGAGTRAHGTLNAALASGKASGIARGFVRHKWGRIVASLGSDFDPNAGFSTGSIGGSTIGAGFIRSGRWCHPPHWPQS*
Ga0134064_100942292	3300010325	Grasslands Soil	GGDTFQATKATYRGTSLSSDPRLAGALTIRAWSLVDTTNGVGHVFGNFRIKGPGTRAHGTLNGAIANGEASGIARGFVRHQWGRIVASMGSTFNPNTGFSTGSLGGSTVGAGFIRSGRWCAPPHWPQS*
Ga0126378_112673301	3300010361	Tropical Forest Soil	DTFQATKATYTGTATSTDPRLAGALTIHAWSLVDTSNGVGHVFGNFRIKGPGTAAHGTLNGAIANGEASGIARGFVRHDWGRIVASMGSSFDPNAGFSEGSLGGSTAGAGFIRSGQWCTPPHWPKS*
Ga0126377_125595411	3300010362	Tropical Forest Soil	AHRGAPSVQAVSATFNATTVTQRYLTTCSVNGGDTFQASRAIYTGTASSADPRLGGALTIRAWSLVDTTNGVGHLYGTFRIKGTGRNQAHGTLNAAIAGGKASGLARGFVRGKWGHIVASLGSTFDPTAGFSSGSIGSGTAGAGSLRSGRWCHPPNWPASSGS*
Ga0134066_103995352	3300010364	Grasslands Soil	DPRLAGALRIRAWSLVDTTNGVGHVFGNFRIKGPGTRAHGTLNGAIANGEASGIARGFVRHQWGRIVASMGSTFNPNTGFSTGSLGGSTVGAGFIRSGRWCAPPHWPQS*
Ga0126379_112377611	3300010366	Tropical Forest Soil	GGDTFAATRAIYTGTSTSTDPRLAGAITVRAWSLVDTTNGVGHVFGVFRIRGTAGGAHGTLNAALASGMASGLARGFVRGKYGRLVASLGATFDPSAGFSTGSIGGSTTGAGFIRSGRWCHPPHWPAG*
Ga0126379_119324282	3300010366	Tropical Forest Soil	YLTTCSVNGGDTFQATRAIYTGTATSADPRLTGALTIRAWSLVDTTNGVGHLFGNFRIKGTGRNQAHGTLNAAIAGGKASGLARGFVRGKWGHIVASLGSTFDPTAGFSSGSIGSGTAGAGFLRSGRWCHPPHWPASSGS*
Ga0134125_107226332	3300010371	Terrestrial Soil	MYQVTCSVTGGDTFQATRATYKGTVASADPRLAGALTVRAWSLVDTTNGVGHVYGRFYIKGAGTRAHGTLNAALADGKASGIARGYVHHRWGRIVVSLGTLFDPNTGFSTGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0126381_1019811971	3300010376	Tropical Forest Soil	ATFDATTVTQRFLTTCSVNGGDTFQATRAVYAGTAASSDPQLAGALTIRAWSLVDTTNGVGHLYGTFRIDGTGNDRAHGTLNAAISGGKASGLARGFTGGPWGHVVASLGATFDPVAGFSSGSLGSGTTGAGFLRSGRWCHPRNWPASQGS*
Ga0134126_126822731	3300010396	Terrestrial Soil	QVTCSVTGGDTFQATRATYKGTVASADPRLAGALTVRAWSLVDTTNGVGHVYGRFYIKGAGTRAHGTLNAALADGKASGIARGYVHHRWGRIVVSLGTLFDPNTGFSTGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0126383_125103342	3300010398	Tropical Forest Soil	VSATFDATTVTQRYLTTCSVNGGDTFQATRAMYTGTATSADPRLAGALTIRAWSLVDTTNGVGHLFGTFRIKGTGRNQAHGTLNAAIAGGKASGLARGFVRGRWGHVVASLGATFDPTAGFSERSIGSGTAGAGFLRSGRWCHPPNWPASSGS*
Ga0105246_108292201	3300011119	Miscanthus Rhizosphere	TIATYTGTSTSVDPRLAGALRIRAWSLVDTTNGVGHVFGRFHIIGAGTRAHGTLNAALASGKASGIARGFVRHTWGRIVASLGSDFDPNAGFSTGSIGGSTVGAGFIRSGRWCHPPHWPQS*
Ga0137381_110288182	3300012207	Vadose Zone Soil	GGDTFQATRAVYRGTSLSSDPRLAGALTIRAWSLVDTTNGVGHVFGLFRIKGPGTQAHGTLNAAVANGNASGIARGFVRHKWGRIVASLGSTFDPNAGFSLGSLGGSTAGAGFIRSGRWCAPPNWPQG*
Ga0137376_106495811	3300012208	Vadose Zone Soil	SSDPRLAGTLTIRAWSLVDTTNGVGHVFGLFRIAGTDGGHAHGTLNAALADGKASGIARGFVRHRWGRLVASLGATFDPSAGFASGSVGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0134055_10148481	3300012401	Grasslands Soil	TFQATIATYTGASSSSDPRLAGALRIRAWSLVDTTNGVGHVFGIFHINGAGTRAHGTMNAALAGGKASGIARGFVRHQWGRIVASLGSDFDPNAGFSSGSLGGSTTGAGFIRSGRWCHPPNWPRS*
Ga0137359_112485081	3300012923	Vadose Zone Soil	ASATFSATTVANKDQVTCSVTGGDTFQATRAVYTGSSLSSDPRLAGALTIRAWSLVDTTNGVGHVFGLFRIKGPGTQAHGTLNAAVANGNASGIARGFVRHKWGRIVASLGSTFDPNAGFSLGSLGGSTAGAGFIRSGRWCAPPNWPQG*
Ga0164300_100494711	3300012951	Soil	KSQVTCSVTGGDTFQATIATYTGTSTSADPRLAGALRIRAWSLVDTTNGVGHVFGRFHIIGAGTRAHGTLNAALASGKASGIARGFVRHKWGRIVASLGSDFDPNAGFSTGSIGGSTVGAGFIRSGRWCHPPNWPQS*
Ga0126369_135970011	3300012971	Tropical Forest Soil	NGGDTFQATRATYTGASLSSDPRLAGALTIRAWSLVDTTNGVGHVFGIFRIKGTAGGAHGTMNAALSSGKASGLARGFVRGKYGRLVASLGASFDPTAGFSTGSIGGSTTGAGFIRSGRWCHPPHWPAG*
Ga0134077_104877651	3300012972	Grasslands Soil	AASATFAAATVSNKSQVTCSVSGGDTFQATIATYTGASSSSDPRLAGALRIRAWSLVDTTNGVGHVFGIFHINGAGTRAHGTMNAALADGKASGIARGFVRHQWGRIVASLGSDFDPNAGFSSGSLGGSTTGAGFIRSGRWCHPPNWPRS*
Ga0134076_105144031	3300012976	Grasslands Soil	TVSNKSQVTCSVSGGDTFQATIATYTGASSSSDPRLAGALRIRAWSLVDTTNGVGHVFGIFHINGAGTRAHGTMNAALADGKASGIARGFVRHQWGRIVASLGSDFDPNAGFSSGSLGGSTTGAGFIRSGRWCHPPNWPRS*
Ga0164307_104976692	3300012987	Soil	NGGDTFQATRATYTGTATSADPRLAGTLTIRAWSLVDTTNGVGHLFGNFRIVGSVNKRAHGTVNAAIAGGNASGLARGFVRGKWGHVVASLGSSFSPTAGFSSGTIGSSTVGAGFLRSGRWCHPANWPGSNGS*
Ga0157369_105415591	3300013105	Corn Rhizosphere	TCSVNGGDTFQATRATYTGTAASADPRLAGALTIRAWSLVDTTNGVGHLFGEFRIRGTGRNLAHGTLNAAISGGNASGLARGFVRGRWGHIVASLGATFDPTAGFSSGSIGSSTAGAGFLRSGRWCHPPNWPSS*
Ga0157374_111226042	3300013296	Miscanthus Rhizosphere	VQGASASFTAPTVSQKYQVTCSVTGGDTFQATRAVYRGLATSSDPRLAGAITIRAWSLVDTTNGVGHVYGVFRIKGAGTRAHGTLNAALANGKASGIARGFVRHNWGRIVVSLGSDFDPSTGFSTGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0163162_108561841	3300013306	Switchgrass Rhizosphere	NAPTVSNKSQVTCSVTGGDTFQATIATYTGTSTSVDPRLAGALRIRAWSLVDTTNGVGHVFGHFHIVGAGTRAHGTLNAALASGKASGIARGFVRHKWGRIVASLGSDFDPNAGFSTGSIGGSTVGAGFIRSGRWCHPPHWPQS*
Ga0134079_106290131	3300014166	Grasslands Soil	TYRGTSLSSDPRLAGALTIRAWSLVDTTNGVGHVFGNFRIKGPGTRAHGTLNGAIANGEASGIARGFVRHQWGRIVASMGSTFNPNTGFSTGSLGGSTVGAGFIRSGQWCAPPHWPKS*
Ga0132257_1027552201	3300015373	Arabidopsis Rhizosphere	MSQVTCSVTGGDTFQATIATYTGASLSDDPRLAGALRIRAWSLVDTTNGVGHVFGEFHIKGAGTRAHGTLNAALADGKASGIARGYVRHQWGRIVASLGTDFSPNAGFSTGSLGGSTTGAGFIRSGRWCHPPHWPQS*
Ga0132257_1045033461	3300015373	Arabidopsis Rhizosphere	QAASATFNAPTVSNKSQVTCSVTGGDTFQATIATYTGTSTSVDPRLAGALRIRAWSLVDTTNGVGHVFGRFHIIGAGTRAHGTLNAALASGKASGIARGFVRHKWGRIVASLGSDFDPNAGFSTGSIGGSTVGAGFIRSGRWCHPPHWPQS*
Ga0173482_104500162	3300019361	Soil	GGDTFQATIATYTGTSTSVDPRLAGALRIRAWSLVDTTNGVGHVFGRFHIVGAGTRAHGTLNAALASGKASGIARGFVRHKWGRIVASLGSDFDPNAGFSTGSIGGSTVGAGFIRSGRWCHPPHWPQS
Ga0224712_104637861	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	TCSVNGGDTFQATRAKYTGTATSADPRLAGALTIRAWSLVDTTNGVGHLYGTFRIEGSGNQRAHGTLNAAISGGNASGLARGFVRGKWGHVVASLGAAFSPTAGFSSGSIGSSTVGAGFLRSGRWCHPPNWPAGQGA
Ga0224712_106306751	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	RLAGALTIRAWSLVDTTNGVGHLYGTFRIVGTGRNRAHGTLNAAVAGGKASGLARGFVRGRWGHIVASLGASFDPTAGFSSGSIGTGTAGAGFLRSGRWCHPPHWPASQGS
Ga0247676_10511951	3300024249	Soil	AKYTGTATSADPRLAGALTIRAWSLVDTTNGVGHLYGTFRIEGSGNQRAHGTLNAAISGGNASGLARGFVRGKWGHVVASLGAAFSPTAGFSSGSIGSSTVGAGFLRSGRWCHPPNWPAGQGA
Ga0247687_10232482	3300024286	Soil	TTVTQHYLTTCSVNGGDTFQATRAKYTGTATSADPRLAGALTIRAWSLVDTTNGVGHLYGTFRIDGSGNQRAHGTLNAAISGGNASGLARGFVRGKWGHVVASLGAAFSPTAGFSSGSIGSSTVGAGFLRSGRWCHPPNWPAGQGA
Ga0207695_102165871	3300025913	Corn Rhizosphere	ATTVSQHYLTTCSVNGGDTFQATRATYAGTAASADPRLAGALTIRAWSLVDTTNGVGHLFGEFRIRGTGRNLAHGTLNAAISGGNASGLARGFVRGRWGHIVASLGATFDPTAGFSSGSIGSSTAGAGFLRSGRWCHPPNWPSS
Ga0207660_107380422	3300025917	Corn Rhizosphere	EATSSDPRLAGALTIRAWSLVDTTNGVGHVYGVFHIRGAGTRAHGTLNAALANGKASGIARGFVRHNWGRIVVSLGSDFDPNAGFSTGSLGGSTTGAGFIRSGRWCHPPHWPQS
Ga0207660_113372051	3300025917	Corn Rhizosphere	VQAASATFAATTVSRESQVTCSVTGGDTFQATIATYTGTSSSSDPRLAGALRIRAWSLVDTTNGVGHVYGRFHIKGAGTRAHGTLNAALANGKASGIARGFVRHNWGRIVASLGSDFAPNAGFSQGSLGGSTTGAGFIRSGRWCHPPHWPQS
Ga0207649_110351882	3300025920	Corn Rhizosphere	SADPRLAGALTIRAWSLVDTTNGVGHLFGEFRIRGTGRNLAHGTLNAAISGGNASGLARGFVRGRWGHIVASLGATFDPTAGFSSGSIGSSTAGAGFLRSGRWCHPPNWPSS
Ga0207652_109549652	3300025921	Corn Rhizosphere	DPRLAGALTIRAWSLVDTTNGVGHVYGVFHIRGAGTRAHGTLNAALANGKASGIARGFVRHNWGRIVVSLGSDFDPSTGFSTGSLGGSTTGAGFIRSGRWCHPPHWPQS
Ga0207664_104146081	3300025929	Agricultural Soil	ALSSDPRLAGELTIRAWSLVDTTNGVGHVFGIFQIRGVDTRAHGTLNAALATGDASGIARGFVRHPWGRVVASLGATFDPDTGFSSGSLGGSTTGAGFIRSGRWCHPPHWPQS
Ga0207690_101914231	3300025932	Corn Rhizosphere	RAIYRGEATSSDPRLAGALTIRAWSLVDTTNGVGHVYGVFHIRGAGTRAHGTLNAALTNGKASGIARGFVRHKWGRIVVSLGSDFDPNTGFSMGSLGGSTTGAGFIRSGRWCHPPHWPQS
Ga0207690_115256042	3300025932	Corn Rhizosphere	VNGGDTFQATRAKYTGTATSADPRLAGALTIRAWSLVDTTNGVGHLYGTFRIEGSGNQRAHGTLNAAISGGNASGLARGFVRGKWGHVVASLGAAFSPTAGFSSGSIGSSTVGAGFLRSGRWCHPPNWPAGQGA
Ga0207678_107112011	3300026067	Corn Rhizosphere	TRAVYRGLATSSDPRLAGAITIRAWSLVDTTNGVGHVYGVFRIKGAGTRAHGTLNAALANGKASGIARGFVRHNWGRIVVSLGSDFDPSTGFSTGSLGGSTTGAGFIRSGRWCHPPHWPQ
Ga0209265_11273411	3300026308	Soil	QAASATFAATTVSNKSQVTCSVSGGDTFQATIATYTGASSSSDPRLAGALRIRAWSLVDTTNGVGHVFGIFHINGAGTRAHGTMNAALAGGKASGIARGFVRHQWGRIVASLGSDFDPNAGFSSGSLGGSTTGAGFIRSGRWCHPPNWPRS
Ga0209473_10918252	3300026330	Soil	TFAATTVSHQYQVTCSVNGGDTFQATRAVYTGEATSSDPRLAGALRIRAWSLVDTTNGVGHVFGVFHIRGTGTRAHGTLNAALSDGKASGLARGFVRHSWGRIVASLGATFDPSAGFSSGSLGGSTTGAGFIRSGRWCHPPHWPQS
Ga0209059_11569892	3300026527	Soil	KATYRGTSLSSDPRLAGALTIRAWSLVDTTNGVGHVFGNFRIKGPGTRAHGTLNGAIANGEASGIARGFVRHQWGRIVASMGSTFNPNTGFSTGSLGGSTVGAGFIRSGRWCAPPHWPQS
Ga0209160_12754181	3300026532	Soil	ATYAGTALSSDPRLAGELTIRAWSLVDTTNGVGHVFGIFQIRGVDTRAHGTLNAALATGDASGIARGFVRHPWGRLVASLGATFDPDTGFSSGSLGGSTTGAGFIRSGRWCHPPHWPQS
Ga0209156_104570691	3300026547	Soil	RGPSVEAASATFAATTVSHQYQVTCSVNGGDTFQATRAVYTGEATSSDPRLAGALRIRAWSLVDTTNGVGHVFGVFHIRGTGTRAHGTLNAALSDGKASGLARGFVRHSWGRIVASLGATFDPSAGFSSGSLGGSTTGAGFIRSGRWCHPPHWPQS
Ga0209810_100074215	3300027773	Surface Soil	MSRKRFALLGLFVAAALVSVGVAAAHGRQPSVQSATATFNATTVAQKYQATCSVNGGDSFQATRAVYTGTSTSTDPRLAGALTIRAWSLVDTTNGVGHVYGHFRIVGTGTRAHGTLNAALSDGKASGIARGFLRHEWGRIVASLGATFDPNVGFSSGSLGGSTSGAGFVRSGRWCHPPNWPQP
Ga0209465_105922401	3300027874	Tropical Forest Soil	LSSDPRLAGALTIRAWSLVDTTNGVGHVFGIFRIKGTAGGAHGTLNAALSNGKASGLARGFVRGKYGRLVASLGATFDPTAGFSTGSIGGSTTGAGFIRSGRAAADRAGREAGG
Ga0307498_103789821	3300031170	Soil	TGGDTFQATKATYTGTSLSSDPRLAGALTIRAWSLVDTTNGVGHVFGDFRIKGPGTRAHGTLNGAIANGEASGIARGFVRNQWGRIVASMGSAFSPNTGFSMGSLGGSTAGAGFIRSGRWCAPPHWPKS
Ga0307500_101187482	3300031198	Soil	SATFNAPTVSNKSQVTCSVTGGDTFQATIATYTGTSTSADPRLAGALRIRAWSLVDTTNGVGHVFGRFHIIGAGTRAHGTLNAALASGKASGIARGFVRHKWGRIVASLGSDFDPNAGFSTGSIGGSTVGAGFIRSGRWCHPPHWPQS
Ga0170819_104394121	3300031469	Forest Soil	NGGDTFQATRATYTGLATSTDPRLAGALTIRAWSLVDTSNGVGHVFGEFRILGTGTRAHGTLNAAISGGKASGLARGFLRHRWGRLIASLGATFDPSAGFASGSLGSSTTGAGFIRSGRWCHPPHWPQS
Ga0318568_106541182	3300031819	Soil	YTGTATSADPRLAGALTIRAWSLVDTTNGVGHLFGTFNIKGAGRNQAHGTLNAAISGGSASGLARGFVRGRWGHVVASLGATFDPTAGFSSGSIGSSTAGAGFLRSGRWCHPPNWPASNG
Ga0308175_1016170452	3300031938	Soil	RATYTGTSASSDPRLAGALTIRAWSLVDTTNGVGHVFGRFHITGAGTRAHGTLNAALSSGKASGIARGFVRHEWGRIVASLGATFDPTAGFSSGSLGGSTTGAGFIRSGRWCHPPHWPQS
Ga0308174_102809001	3300031939	Soil	SARRGATSVQAASANFTATTVSHESQVTCSVTGGDTFQATIATYSGEALSSDPRLAGALRIRAWSLVDTTNGVGHVFGVFHIRGTGTRAHGTLNAALANGKASGIARGFVHHRWGRIVVSLGSSFDPNTGFSLGSLGGSTTGAGFIRSGRWCHPPHWPQS
Ga0308173_101873593	3300032074	Soil	CSVTGGDTFQATRATYKGTVASADRRLAGALTVRAWSLVDTTNGVGHVYGRFYIKGAGTRAHGTLNAALADGKASGIARGYVHHRWGRIVVSLGTLFDPNTGFSTGSLGGSTTGAGFIRSGRWCHPPHWPQS
Ga0335082_102873501	3300032782	Soil	QATRATYTGTSTSTDPRLAGALTIRAWSLVDTTNGVGHVFGNFRIKGPDTRAHGTLNGAIANGQASGIARGFVRHSWGRIVASMGSTFDPSAGFSEGSLGGATAGAGFIRSGQWCAPPHWPKS
Ga0310810_101822651	3300033412	Soil	SVQGASASFTAPTVSQKYQVTCSVTGGDTFQATRAVYRGLATSSDPRLAGAITIRAWSLVDTTNGVGHVYGVFRIKGAGTRAHGTLNAALANGKASGIARGFVRHNWGRIVVSLGSDFDPSTGFSTGSLGGSTTGAGFIRSGRWCHPPHWPQS
Ga0310811_102175555	3300033475	Soil	VTGGDTFQATRAVYRGLATSSDPRLAGAITIRAWSLVDTTNGVGHVYGVFRIKGAGTRAHGTLNAALANGKASGIARGFVRHNWGRIVVSLGSDFDPSTGFSTGSLGGSTTGAGFIRSGRWCHPPHWPQS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094288

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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