NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F094282

Metagenome / Metatranscriptome Family F094282

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F094282
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 75 residues
Representative Sequence VTVELGSLAELEPALAREEFDVARVFVGYGASAPSAPEPCRLPKVAYSLDRPASPTGSFTTGEWHETWSPAAYA
Number of Associated Samples 95
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 61.32 %
% of genes near scaffold ends (potentially truncated) 96.23 %
% of genes from short scaffolds (< 2000 bps) 96.23 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (66.038 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(10.377 % of family members)
Environment Ontology (ENVO) Unclassified
(20.755 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.170 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114
1E41_10208760
2FE1_09370550
3Ga0062593_1025176542
4Ga0062592_1003857161
5Ga0066674_103879372
6Ga0066677_100971442
7Ga0066680_109366551
8Ga0066671_103307272
9Ga0066388_1010435962
10Ga0070682_1016958301
11Ga0070687_1004539502
12Ga0070714_1007502491
13Ga0070714_1023888921
14Ga0070714_1024844642
15Ga0070708_1014424271
16Ga0070681_105103621
17Ga0073909_101475372
18Ga0070684_1007186472
19Ga0066699_105380422
20Ga0068864_1025555452
21Ga0066903_1035859031
22Ga0066903_1038077191
23Ga0075283_10246832
24Ga0075282_10574652
25Ga0066652_1000091698
26Ga0070716_1008183462
27Ga0070712_1009369721
28Ga0074062_100206271
29Ga0066660_109807511
30Ga0079221_116322171
31Ga0075426_102593473
32Ga0074063_128374962
33Ga0074063_136087592
34Ga0075435_1007503852
35Ga0099795_104370731
36Ga0105240_110619452
37Ga0066709_1004513741
38Ga0126374_108673302
39Ga0127503_107856301
40Ga0134065_103156231
41Ga0134063_106291443
42Ga0126376_117016711
43Ga0126376_118314382
44Ga0126377_113512322
45Ga0126379_103672253
46Ga0126379_138031571
47Ga0134126_115839652
48Ga0134121_103833453
49Ga0134123_136103792
50Ga0126350_117031953
51Ga0105246_105529941
52Ga0137382_106057442
53Ga0137363_112364502
54Ga0137380_114402542
55Ga0137381_110405492
56Ga0137381_110822481
57Ga0137371_101263761
58Ga0137384_103887362
59Ga0157285_102390891
60Ga0164309_119300182
61Ga0164304_107193492
62Ga0134081_103268821
63Ga0182006_12371461
64Ga0134072_101052871
65Ga0132255_1058326501
66Ga0134083_102690171
67Ga0187821_102239202
68Ga0187821_103499442
69Ga0187785_100875883
70Ga0187823_100114421
71Ga0187822_101873862
72Ga0066655_103004312
73Ga0066667_101904523
74Ga0066662_115493511
75Ga0193694_10347612
76Ga0247676_10014684
77Ga0247692_10091853
78Ga0247666_10197191
79Ga0207705_112650891
80Ga0207649_103131591
81Ga0207700_115965032
82Ga0207664_102906442
83Ga0207664_103038211
84Ga0207664_119128821
85Ga0207686_102668401
86Ga0207665_113941822
87Ga0209265_11632212
88Ga0209161_102237051
89Ga0209474_107349892
90Ga0247675_10436851
91Ga0265334_101448132
92Ga0307506_104439371
93Ga0318573_104776571
94Ga0318496_100689383
95Ga0307469_109203452
96Ga0318535_100523803
97Ga0318565_101683252
98Ga0308175_1029993621
99Ga0308175_1031142682
100Ga0318558_100912311
101Ga0318505_102411462
102Ga0318524_100479731
103Ga0308173_115398211
104Ga0335082_115317011
105Ga0335080_114628952
106Ga0335081_115418191
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 12.75%    β-sheet: 13.73%    Coil/Unstructured: 73.53%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070VTVELGSLAELEPALAREEFDVARVFVGYGASAPSAPEPCRLPKVAYSLDRPASPTGSFTTGEWHETWSPAAYASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
66.0%34.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Soil
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Grasslands Soil
Grass Soil
Surface Soil
Soil
Agricultural Soil
Soil
Grasslands Soil
Grass Soil
Soil
Hardwood Forest Soil
Soil
Soil
Rice Paddy Soil
Tropical Peatland
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Agricultural Soil
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Rhizosphere
Rhizosphere
Corn Rhizosphere
Boreal Forest Soil
3.8%4.7%2.8%7.5%2.8%5.7%4.7%8.5%3.8%10.4%2.8%2.8%2.8%4.7%2.8%5.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E41_102087602170459005Grass SoilVTVELASLAELEPALAAEEFDVARVYIGYGATAPSALEPCRLPPVAYSLAPSQSSRGTFSVGDWKMTWSDEEYAFAV
FE1_093705502189573002Grass SoilVTVELASLEELEPALAREEFDVARVFVGYGASAPSAPEPCRIPRVAYSLDRPASPTGTFRTG
Ga0062593_10251765423300004114SoilVTVELASLEELEPALARETFDVARVFVGYGASAPSAPEPCPLPKVAYSLEGPAPATGSFRTS
Ga0062592_10038571613300004480SoilVTVELGSLAELEPALAAEEFEVARVFVGYGATAPSAPEPCRLPKVAYSLEQPTTPRGSFRTGEWHET
Ga0066674_1038793723300005166SoilVTVELASLEELEPALAREEFDVARVFVGYGASAPSAPEPCRIPRVAYSLDRPAFHTGSFRTGEWHTTWSPAAYA
Ga0066677_1009714423300005171SoilMTVELDALEQLEPALAAEEFDVARVFISYGATAPSAPEPCRLPKVAYSLDAPRAAGGSFSVGDWETTWSEEEYASAVETVR
Ga0066680_1093665513300005174SoilVTVELGSVAELEAALAEEEFDVARVFVGYGACAPSAPEPCRLPRVAYSLERPATPRSSFRTGEWQETWTPAAYAAAIETVREAIHEGDVYQ
Ga0066671_1033072723300005184SoilVTVELGSLAELEPALADEEFDIARVYVGYGACAPSAPEPCRLPKVAYSLERPAAPGGSFRTGEWHETWTPAAYAAAIETVREAIREGDV
Ga0066388_10104359623300005332Tropical Forest SoilVTVELDSIAELEAALAGERRDARVYIGYRACAHGAPESCSLPAVAYSCDPPRRDAGSFAVGDWRATWSESDYAAAIETVRAAIFEGD
Ga0070682_10169583013300005337Corn RhizosphereMTVELGSLAELEPALADEEFDVARVFVGYGASAPSAPEPCRLPKVAYSLEAPAQATGAFRTGDWQTTWSPAEYASAIETVREAIH
Ga0070687_10045395023300005343Switchgrass RhizosphereVAAELASLEELEPALAREEFDIARVFIGYGASAPSAPEPCRLPAVAYSLDPPARASGSFRTGEWHGTWTPAAYAAAIETVRHAIHEGDVYQ
Ga0070714_10075024913300005435Agricultural SoilVTVELGSLEELEPALAREEFDVARVFIGYGATAPSAPEPCRLPKMAYSLERPAAPTGSFTTGEW
Ga0070714_10238889213300005435Agricultural SoilVTVELGSLAELEPALAGEEFEVARVFVGYGATAPSAPEPCRLPKVAYSLERPASPTGSFRTGEWR
Ga0070714_10248446423300005435Agricultural SoilVTVELGSLAELEPALAEEDFDVARVFVGYGASAPSSPEPCRLPKVAYSLERPAEPSGSFRTGDWNETWSPGDYAAAIETVREAIHEGDVYQ
Ga0070708_10144242713300005445Corn, Switchgrass And Miscanthus RhizosphereVTDELGSLAELEPALAREEFDVARVFVGYGASAPSAPEPCRLPKVAYSLDPPAEPTDSFRTGEWHETWSPAAYA
Ga0070681_1051036213300005458Corn RhizosphereVTVELGSLAELEPALAGEEFEVARVFIGYGATAPSAREPCRLPKVAYSLDRPPASTGSFRTGEWHE
Ga0073909_1014753723300005526Surface SoilMTVELGSLAELEPALADEEFDVARVFVGYGASAPSAPEPCRLPKVAYSLEAPAQATGAFRTGDWQTTWSPAEYASAIETVREAIHE
Ga0070684_10071864723300005535Corn RhizosphereMTVELGSLAELEPALADEEFDVARVFVGYGASAPSAPEPCRLPKVAYSLEAPAQATGAFRTGDWHTTWSPAAYASAIETVREAIREGDVYQ
Ga0066699_1053804223300005561SoilVTVELGSLEELEPALAREEFEVARVFVGYGASAPSAPEPCRLPTVAYSLDRPAPPAGSFRTGEWHETWSP
Ga0068864_10255554523300005618Switchgrass RhizosphereMTVELGSLAELEPALADEEFDVARVFVGYGASAPSAPEPCRLPKVAYSLEAPAQATGAFRTGDWQ
Ga0066903_10358590313300005764Tropical Forest SoilMAVRPDTTDAVVELESVAALESALAREEFDVARVYVGYAASAPSAPEPCRLPRVAYTLGAPVPPGGGFSVGDWETTWS
Ga0066903_10380771913300005764Tropical Forest SoilVTVELPSLEELGPALAREEFDVARVFVGYGATAPSAPEPCRLPPVAYSLDRAAPASGSFKTGDWHQTWTPDAYAAAIETVREA
Ga0075283_102468323300005891Rice Paddy SoilLTVELDSLAELEPVLERETFDVARVFVAYGASAPSKPDPCELPKVAYTFDRPCPARGGFLVGEWRATWSAEEYA
Ga0075282_105746523300005896Rice Paddy SoilVTVELGSLAELEPALADEEFDVARVFIGYGATAPSAPEPCRLPKVAYSLERPAVARGSFRTGEWHETWTPAAYAAAIETVRDAI
Ga0066652_10000916983300006046SoilVTVDLASLEELEPALAREEFDIARVFVGYAASAPSAPEPCRLPAVAYSLDAPTAASGSFRTGEWHQTWTPAAYAAAIETV
Ga0070716_10081834623300006173Corn, Switchgrass And Miscanthus RhizosphereMTVELGSLAELEPALADEEFDVARVFVGYGASAPSAPEPCRLPKVAYSLEAPAQATGAFRTG
Ga0070712_10093697213300006175Corn, Switchgrass And Miscanthus RhizosphereVTVELGSLAELEPALAQEEFEVVRVFVGYGASAPSAPEPCRLPKVAYSLAPPPEPAGSFRTGEWHE
Ga0074062_1002062713300006606SoilVTVELSSLAELEPALAQEEFEVARVFVGYGASAPSAPELCRLPKVAYSLDRPVTSRGLFRTGEWHTTWSPAAYAD
Ga0066660_1098075113300006800SoilVTVELGSLAELEPALASEEFDVARVFVGYGAYAPSAPEPCRLPRVAYSLERPAEPSGSFRTGEWRETWSPAAYAAAIETVR*
Ga0079221_1163221713300006804Agricultural SoilVTVELGSLAELEPALAEEDFDVARVFVGYGASAPSSPEPCRLPKVAYSLERPAEPSGSFRTGDWNETWSPGDYATAIETVREAIHEG
Ga0075426_1025934733300006903Populus RhizosphereVAVELASLEELEPALAREEFDVARVFVGYGASAPSAPEPCRLPAVAYSLDRPTAASGSFRTGEWHQTWTP
Ga0074063_1283749623300006953SoilVTTVELASLAELEPALARERFEVARVFVSYGACAPTGPEPCRLPPVAYSLDPPRQAQGTFATGPWQATW
Ga0074063_1360875923300006953SoilVTVELSSLAELEPALAQEEFEVARVFVGYGASAPSAPELCRLPKVAYSLDRPLTSRGLFRTGEWHTTWSPAAYADAIATVR
Ga0075435_10075038523300007076Populus RhizosphereVAVELASLEELEPALAREEFDVARVFVGYGASAPSAREPCRLPAVAYSLDRPTAASGSFRTGEWHQTWTPAAYAAAIET
Ga0099795_1043707313300007788Vadose Zone SoilVTVELASLEELEPALAREDFDVARVFVGYGACAPSAPEPCRIPRVAYSLDRPASPTGSFRTGEWHTTWSPAAY
Ga0105240_1106194523300009093Corn RhizosphereVTVELDSLAELEPALAGEEFDVARVFVGYNACARSAPEPCRLPRVAYSLDRPAAPTGSFRTGEWHETWSPAAYAAAIESVRKAIREG
Ga0066709_10045137413300009137Grasslands SoilVTVELASLEELEPALAREEFDIARVFVGYAASAPSAPEPCRLPAVAYSLDAPTAASGSFRTGEWHQTWTPAAYAAAIETVRDAIHEGD
Ga0126374_1086733023300009792Tropical Forest SoilVTVELASLEELEPALAREEFDVARVFIGYGASAPSAPEPCRLPPVAYSLDRPAEPTGTFTTGEWHQT
Ga0127503_1078563013300010154SoilVTVELDALEELEPALAREDFDVARVFVGYGACAPAAPDPCRLPVVAYTLDRPLPGSGTFTTGDWHQTWTPAA
Ga0134065_1031562313300010326Grasslands SoilVTVELASLEELEPALAREEFDVARVFVGYGSSAPSAPEPCRIPRVAYSLDRPASSTGSFRTGEWHTTWSPAAYATAIGR
Ga0134063_1062914433300010335Grasslands SoilVTVELGSLEELEPALAREEFEVARVFVGYGASAPSAPEPCRLPTVAYSLDRPAPPAGSFRTGEWHETWSPDAYGAAIETVREA
Ga0126376_1170167113300010359Tropical Forest SoilVTVELGSLAELEPALAGEKFDVARVFVGYGACAPSAPEPCRLPKVAYSLERPASPGGSFRTGEWHETWSPAAYAAAIETVREAIHEGDVYQ
Ga0126376_1183143823300010359Tropical Forest SoilVTVELGSLAELEPALAEEEFDVARVFVGYGACAPSAQEPCRLPRVAYSLEPPAPSPGSFRTGEWRTTWS
Ga0126377_1135123223300010362Tropical Forest SoilVTVELGSFAALEPALAREEFEVARVFIGYDACAPSAPGPCRLPKVAYTLDEASAPGGSFRTGEWQETWSPAAYATAIETVREAIR
Ga0126379_1036722533300010366Tropical Forest SoilVTVELGSLAELESALAGEEFDVARVFVGYGATAPSAPEPCRIPKVAYSLDRPVRSSGSFRTGEWRTTWSPA
Ga0126379_1380315713300010366Tropical Forest SoilVTVELASLEELEPALAREQFDVARVFIGYGASAPSAPEPCRLPTVAYTLEPPLPGIGTFTTGAWDQTWTPAAYASAIETVRE
Ga0134126_1158396523300010396Terrestrial SoilMTVELGSLAELEPALAGEEFDVARVFIGYGATAPSAPEPCRLPKVAYSLERPASPSGSFRTGEWRETWSPAAYASAI
Ga0134121_1038334533300010401Terrestrial SoilMTVELGSLAELEPALADEEFDVARVFVGYGASAPSAPEPCRLPKVAYSLEAPAQATGAFRTGDWQTTWSPAEYASA
Ga0134123_1361037923300010403Terrestrial SoilVAVELASLEELEPALAREEFDVARVFVGYGASAPSAPEPCRLPAVAYSLDPPARASGSFRTGEWHETWTPA
Ga0126350_1170319533300010880Boreal Forest SoilVTVELGSLAELEPALAAEEFEVARVFVAYGASAPSAPEPCELPKVAYSLDAPPTAHGSFSVGEWETTWSPEE
Ga0105246_1055299413300011119Miscanthus RhizosphereVAAELASLEELEPALAREEFDIARVFIGYGASAPSAPEPCRLPAVAYSLDPPARASGSFRTGEWHETWTP
Ga0137382_1060574423300012200Vadose Zone SoilVTVELGSLAELEPALATEEFDVARIFVGYGACAPSAPEPCRLPKVPYSLEPAAPAIGSFPTGEWHTTRSPEAYTAAIAAVRA
Ga0137363_1123645023300012202Vadose Zone SoilVTVDLASLDELEPALAAEEFEVARVFIGYGATAPSAPEPCRLPAIAYSLDPPATVVGTFSVGEW
Ga0137380_1144025423300012206Vadose Zone SoilVTVELGSLAELEPALAREEFDVARVFVGYGASAPSAPEPCRLPKVAYSLDRPASPTGSFTTGEWHETWSPAAYA
Ga0137381_1104054923300012207Vadose Zone SoilVTVELGSLAELEPALAREEFDVARVFIGYGASAPSAPEPCRLPKVAYSLDRPVTSRGSFSTGEWHTTWSPAAYADAIDTVREAIREGDVY
Ga0137381_1108224813300012207Vadose Zone SoilVTVELDSLAELEPALAQAEFDVARVFVGYGACAPSTAEPCRLPKVAYSLERPAEPTGSFRTGE
Ga0137371_1012637613300012356Vadose Zone SoilVTVELDSLAELEPALAQAEFDLARVFVGYGACAPSAAEPCRLPKVAYSLDRPAELSGSFRTGEWHETWS
Ga0137384_1038873623300012357Vadose Zone SoilVTVELASLQELEPALTREEFDVARVFVGYGASAPSAPEPCRLPPVAYSLDRPAAPTGSFTTGE*
Ga0157285_1023908913300012897SoilVAAELASLEELEPALAREEFDIARVFIGYGASAPSAPEPCRLPAVAYSLDPPARASDSFRTGEWHETWTPAAYAAAIETV
Ga0164309_1193001823300012984SoilVTVELASLGELEPALARVEFDVARVFVGYGASAPSAPEPCRLPAVAYSLDPPRAPSGTFRTGEWHQTWTPAAYAAAIEAVRDAIHEG
Ga0164304_1071934923300012986SoilMTVELASLAELEPALARERFEVARVFVSYGACAPTGPEPCRLPLVAYTLDPPREAPEPTGDDRLAE
Ga0134081_1032688213300014150Grasslands SoilVTVDLASLEELEPALAREEFGVARVFVGYGACAPSAPEPCRIPRVAYSLDRPASPTGSFRTGEWHTTWSPAAYANAIGRVRE
Ga0182006_123714613300015261RhizosphereVTVELGSLEELEPALAQEEFDVARVFVGYGACAPSAPEPCRLPKVAYSLERPAAPSGSFTTGEWHQTWTPAAYAAAIGTVREAIR
Ga0134072_1010528713300015357Grasslands SoilMTVELGSLEELEPALAREEFDVARVFVGYGACAPSAPEPCRLPKVAYSLDRPAAASGSFRTGEWHQT
Ga0132255_10583265013300015374Arabidopsis RhizosphereVTVELASLGELEAALGQEEFDVARVFVGYGACAPSAPEPIRLPKVAYSLERPATPTGRFRTGEWHETWSPAA
Ga0134083_1026901713300017659Grasslands SoilVTVELASLEELEPALAREYFGVARVFVGYGACAPSAPEPCRLPPVAYSFDRPAAQSGTFTTGEWHQTWTPAAYSA
Ga0187821_1022392023300017936Freshwater SedimentVTVELESAAELEDALAAEDFDVARVFIAYGASAPSAPEPCSLPKVAYSLGAPRSVRGSFSVGPWEA
Ga0187821_1034994423300017936Freshwater SedimentVLEAASRALPEVTVELETLAELEPALARERFDVARVFVGYAACAPSAPGPCELPAVAYTLDPPQAPTGTF
Ga0187785_1008758833300017947Tropical PeatlandVTVELGSLAELEPALAKEEFEVARVFIGYAACAPSPPEACRLPKVAYSLERPAAPRGSFRTGEWRQTWSPAAYAAAIETVRAAIRE
Ga0187823_1001144213300017993Freshwater SedimentVTVELGSVAELEAALAADEFDVARVYIGYGATAPSKPDPCALPAVAYTLEPPRAAQGAFSVGPWETTWSDPEYAA
Ga0187822_1018738623300017994Freshwater SedimentLTVELDSLAELESALECETFDVARVFVAYGASAPSKPDPCELPKVAYTFDRPRPARGAFSVGEWRATWSADDYARAVETVRAAI
Ga0066655_1030043123300018431Grasslands SoilVTVELGSLEELEPALAREEFEVARVFVGYGASAPSAPEPCRLPKVAYSLDRPAPPAGSFRTGEWHETWSPDAYGAAIEWPKLALALTFRRRC
Ga0066667_1019045233300018433Grasslands SoilVTVELGSLAELEPALAEEEFDVARVYVGYATCAPSAPEPCRLPKVAYSLEWPAAPSGSFRTGEW
Ga0066662_1154935113300018468Grasslands SoilVTVELGSLAELEPALADEEFDVARVYVGYGACAPSAPEPCRLPKVAYSLERPAAPGGSFRTGE
Ga0193694_103476123300021415SoilVTVDLASLEELEPALAREGFDVARVFVGYGASAPSAPEPCRLPPVAYSLDPPSAASGAFRTGEWHQTWTPAASTR
Ga0247676_100146843300024249SoilVTVELASLEELEPALAREEFDVARVFVGYGASAPSAPDPCRIPRVAYSLDRPAFPTGSFRTGEWGTPAG
Ga0247692_100918533300024279SoilVTVELASLEELEPALAREEFDVARVFVGYGASAPSAPDPCRIPRVAYSLDRPTLPTGSFRTGEWRTTWSPVAYANAIGRVRQAIREGDVY
Ga0247666_101971913300024323SoilVTVELASLEELEPALAREEFDVARVFVGYGASAPSAPDPCRIPRVAYSLDRPTLPTGSFRTGDW
Ga0207705_1126508913300025909Corn RhizosphereMAATRSAHAVELSSLGELEQALAAEQFEEARVYIGYGATAPSAPEPCSLPAVAYSLDEPRAVRGGFEVG
Ga0207649_1031315913300025920Corn RhizosphereMTVELDALEQLEPALARERFDVARVFVSYGATAPSAPEPCRIPKVAYSLDPAPAATGSFSVGP
Ga0207700_1159650323300025928Corn, Switchgrass And Miscanthus RhizosphereVTVELASLEELEPALAREEFDVARVFVGYGASAPSAPDPCRIPRVAYSLDRPAFPTGSFRTGEWRTTWSPAAYAGAIGRVRDAIREGD
Ga0207664_1029064423300025929Agricultural SoilMTVELDALEQLEPALAAEEFDVARVFVSYGASAPSAPEPCALPKVAYSIDPPRPASGSFSVGAWETTWSAEEYAAAVE
Ga0207664_1030382113300025929Agricultural SoilVTVELASLEELEPALAREEFDVARVFVGYGASAPSAPDPCRIPTVAYSLDRPAFPTGSFRTGEWRTTWSPVAYAN
Ga0207664_1191288213300025929Agricultural SoilVTTVELASLAELEPALARESFEVARVFVSYGTCAPTGPEPCRLPPVAYTLDPPGKAQGTFATGEWRATWSEDEYAAAIETVRAAIFEGDV
Ga0207686_1026684013300025934Miscanthus RhizosphereVAAELASLEELEPALAREEFDIARVFIGYGASAPSAPEPCRLPAVAYSLDPPARASGSFRTGEWHETWTPAA
Ga0207665_1139418223300025939Corn, Switchgrass And Miscanthus RhizosphereMPSVTVELGSLGELEPALDAEEFEVARVFIGYGATAPSAPEPCRLPPVAYSFDPPAAAGGTFSVGEWETTWSEEEYAGAVET
Ga0209265_116322123300026308SoilVTVELGSLEELEPALAAEEFDVARLFVGYGACAPSAPEPCRLPKVAYSLDPPASSTGLFRTGKWHE
Ga0209161_1022370513300026548SoilVTVELGSLEELEPALAREEFEVARVFVGYGASAPSAPEPCRLPKVAYSLDRPAPPAGSFRTGEWHETWSADAYG
Ga0209474_1073498923300026550SoilVTVELETLAELEPALARESFDVARVFVGYAACAPTAPGPCELPAVAYTLEAPRAPTGTFATGEWHT
Ga0247675_104368513300028072SoilVTVELASLEELEPALAREEFDVARVFVGYGASAPSAPDPCRIPRVAYSLDRPTLPTGSFRTGEWRTTWSPAAYAGAIG
Ga0265334_1014481323300028573RhizosphereMGCFVPTVELASLAELEPALARERFEVARVFISYGACAPTGPEPCRLPLVAYTLDPPRRAQGTFATGEWQATWSEGEYAA
Ga0307506_1044393713300031366SoilVTVELASLEELEPALAREEYDVARVFVGYGASAPSAPEPCRLPRVAYSLDRPASTTGTFRTGEWHTTWTPAAYANAIGRVREAI
Ga0318573_1047765713300031564SoilVTVELASLEELEPALAGEEFDVARVFIGYGASAPSAPEPCRLPPVAYSLERPAPPSGTFTTGE
Ga0318496_1006893833300031713SoilVTVELATLEELEPALAREEFDVARLFVGYGATAPSATEPCRIPKVAYSLDRPASPTGSF
Ga0307469_1092034523300031720Hardwood Forest SoilVTVELGSLAKLEPALAGEKFEVARVFVGYGASAPSAPEPCRLPKVAYSLEQPEPAIGTFHTGEWR
Ga0318535_1005238033300031764SoilVTVELATLEELEPALAREEFDVARLFVGYGATAPSATEPCRIPKVAYSLDRPASPTGSFRTGEWHTTWSPAAYADAIGTVREAIREGDVYQ
Ga0318565_1016832523300031799SoilVTVELATLEELEPALAREEFDVARLFVGYGATAPSATEPCRIPKVAYSLDRPASPTGSFRTGEWHTTWSPAAYADAIGTVREA
Ga0308175_10299936213300031938SoilVTVELTSLEELEPALAREEFDVARVFVGYGACAPSAPEPCRIPKVAYSLDRPASPTGSFRTGEWHTTWSPAAYAS
Ga0308175_10311426823300031938SoilVTVELDSLAELEPALAGEAFDVARVFVGYNACAPSAPEPCRLPRVAYSLDRPAAPTGSFRTSEWHETW
Ga0318558_1009123113300032044SoilVTVELATLEELEPALAREEFDVARLFVGYGATAPSATEPCRIPKVAYSLDRPASPTGSFRTGEWHTTWSPAAYADAIG
Ga0318505_1024114623300032060SoilVTVELATLEELEPALAREEFDVARLFVGYGATAPSATEPCRIPKVAYSLDRPASPTGSFRTGEWHTTWSPAAYADAIGTVREAIRE
Ga0318524_1004797313300032067SoilVTVELATLEELEPALAREEFDVARLFVGYGATAPSATEPCRIPKVAYSLDRPASPTGSFRTGEWHTT
Ga0308173_1153982113300032074SoilMAATRSAHAVELTSLAELEPALAQEAFGVARVFVSYGATAPSAPEPCRLPKIAYALEPARRPRGGFRVGD
Ga0335082_1153170113300032782SoilMTVELASLAELEPALARERFEVARVFVAYGACAPTGLEPCRLPLVAYTLDPPRRAEGSFATGDWHATWSEGEYAAAIET
Ga0335080_1146289523300032828SoilLTVELASLAELEPALARERFEMARVFVSYGACAPTGPEPCRLPPVAYTVDPPGRAEGTFATGE
Ga0335081_1154181913300032892SoilVTVELDSIAELEPALAGEEFGVARVYIGYGASAPSAPEPCALPAVAYSLDPPPAPHGSFTVGEWEATWSEREYAHAV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.