Metagenome / Metatranscriptome Family F094277

Basic Information
Family ID	F094277
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	56 residues
Representative Sequence	TIFLLWQGKVPTVIDASKLVVGDRIVVRIRAAAGSSLAQVEATAANHVGDREPASKS
Number of Associated Samples	97
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	96.23 %
% of genes from short scaffolds (< 2000 bps)	90.57 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Most Common Taxonomy
Group	Bacteria (69.811 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (14.151 % of family members)
Environment Ontology (ENVO)	Unclassified (33.019 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.41% β-sheet: 25.88% Coil/Unstructured: 64.71%
Feature Viewer

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Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00072	Response_reg	17.92
PF00486	Trans_reg_C	15.09
PF00672	HAMP	0.94
PF02566	OsmC	0.94
PF01197	Ribosomal_L31	0.94
PF02518	HATPase_c	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0254	Ribosomal protein L31	Translation, ribosomal structure and biogenesis [J]	0.94
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.94
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.94

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.81 %
Unclassified	root	N/A	30.19 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.81 %
Unclassified	root	N/A	30.19 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.81 %
Unclassified	root	N/A	30.19 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.28 %
Unclassified	root	N/A	30.19 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.94 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	45.28 %
Unclassified	root	N/A	30.19 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.94 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.19 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.32 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.89 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.94 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.19 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	7.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.89 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.89 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.94 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.19 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.89 %
unclassified Planctomycetales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales	0.94 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.94 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.19 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.89 %
Planctomycetales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales → Planctomycetales bacterium	0.94 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.94 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090004\|P1_DRAFT_NODE_14326_len_579_cov_7_468049	Not Available	629	Open in IMG/M
2170459006\|GBPF9FW01CBBX5	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
2170459009\|GA8DASG02F9J7G	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
2199352024\|deeps__Contig_65140	Not Available	696	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100429698	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100470849	Not Available	641	Open in IMG/M
3300000956\|JGI10216J12902_101310591	All Organisms → cellular organisms → Bacteria	1880	Open in IMG/M
3300001535\|A3PFW1_10337812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1272	Open in IMG/M
3300004153\|Ga0063455_100410123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	803	Open in IMG/M
3300004157\|Ga0062590_102223998	Not Available	575	Open in IMG/M
3300004479\|Ga0062595_100496455	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300004479\|Ga0062595_101573734	Not Available	611	Open in IMG/M
3300005093\|Ga0062594_100651652	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300005093\|Ga0062594_101993992	Not Available	620	Open in IMG/M
3300005186\|Ga0066676_10317905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1034	Open in IMG/M
3300005366\|Ga0070659_101941365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528	Open in IMG/M
3300005435\|Ga0070714_100706821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	973	Open in IMG/M
3300005445\|Ga0070708_102250079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300005454\|Ga0066687_10803241	Not Available	560	Open in IMG/M
3300005471\|Ga0070698_100394987	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300005526\|Ga0073909_10546151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300005530\|Ga0070679_100638121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1008	Open in IMG/M
3300005532\|Ga0070739_10512406	Not Available	540	Open in IMG/M
3300005542\|Ga0070732_10673078	Not Available	629	Open in IMG/M
3300005552\|Ga0066701_10077504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1898	Open in IMG/M
3300005563\|Ga0068855_101662337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300005569\|Ga0066705_10180138	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300005575\|Ga0066702_10484364	Not Available	755	Open in IMG/M
3300005598\|Ga0066706_10325879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1214	Open in IMG/M
3300005614\|Ga0068856_100330978	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300005764\|Ga0066903_100331869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2440	Open in IMG/M
3300005897\|Ga0075281_1040948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300006031\|Ga0066651_10157856	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300006173\|Ga0070716_100895917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	694	Open in IMG/M
3300006175\|Ga0070712_101981396	Not Available	510	Open in IMG/M
3300006638\|Ga0075522_10227786	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300006791\|Ga0066653_10111279	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300006795\|Ga0075520_1190690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	874	Open in IMG/M
3300006797\|Ga0066659_10951848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300006852\|Ga0075433_11029184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	717	Open in IMG/M
3300006854\|Ga0075425_100328012	All Organisms → cellular organisms → Bacteria	1762	Open in IMG/M
3300009012\|Ga0066710_101751483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	942	Open in IMG/M
3300009038\|Ga0099829_10757185	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300009038\|Ga0099829_11639244	Not Available	530	Open in IMG/M
3300009090\|Ga0099827_10861150	Not Available	785	Open in IMG/M
3300009090\|Ga0099827_11154474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	673	Open in IMG/M
3300009093\|Ga0105240_12747912	Not Available	507	Open in IMG/M
3300010152\|Ga0126318_10267430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300010154\|Ga0127503_10993801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	720	Open in IMG/M
3300010364\|Ga0134066_10356640	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300010373\|Ga0134128_10739636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1091	Open in IMG/M
3300012189\|Ga0137388_10285953	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300012356\|Ga0137371_10741124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	750	Open in IMG/M
3300012359\|Ga0137385_10789596	Not Available	789	Open in IMG/M
3300012362\|Ga0137361_10880936	Not Available	812	Open in IMG/M
3300012363\|Ga0137390_10332190	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300012924\|Ga0137413_10303960	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300012930\|Ga0137407_12351072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300012944\|Ga0137410_11420920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603	Open in IMG/M
3300012975\|Ga0134110_10529886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300012985\|Ga0164308_10743585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	850	Open in IMG/M
3300012986\|Ga0164304_10732304	Not Available	755	Open in IMG/M
3300013100\|Ga0157373_10588955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	809	Open in IMG/M
3300013100\|Ga0157373_11178706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300013104\|Ga0157370_11109174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	715	Open in IMG/M
3300013105\|Ga0157369_11044428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	836	Open in IMG/M
3300013772\|Ga0120158_10243246	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300014157\|Ga0134078_10464288	Not Available	581	Open in IMG/M
3300015265\|Ga0182005_1280772	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales → Planctomycetales bacterium	522	Open in IMG/M
3300015359\|Ga0134085_10628589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300017939\|Ga0187775_10285631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	645	Open in IMG/M
3300017944\|Ga0187786_10125235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	898	Open in IMG/M
3300017944\|Ga0187786_10274312	Not Available	679	Open in IMG/M
3300017947\|Ga0187785_10418893	Not Available	648	Open in IMG/M
3300018027\|Ga0184605_10385246	Not Available	629	Open in IMG/M
3300018071\|Ga0184618_10335384	Not Available	645	Open in IMG/M
3300018433\|Ga0066667_12162833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300018468\|Ga0066662_10600057	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300020069\|Ga0197907_10213770	Not Available	725	Open in IMG/M
3300020077\|Ga0206351_10612065	Not Available	643	Open in IMG/M
3300025862\|Ga0209483_1161013	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300025910\|Ga0207684_10645196	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300025912\|Ga0207707_10375026	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300025912\|Ga0207707_10917485	Not Available	723	Open in IMG/M
3300025916\|Ga0207663_11596071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300025922\|Ga0207646_10748079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	872	Open in IMG/M
3300025929\|Ga0207664_10419367	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300025931\|Ga0207644_10863878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	758	Open in IMG/M
3300025932\|Ga0207690_11259870	Not Available	618	Open in IMG/M
3300025939\|Ga0207665_10795094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300026142\|Ga0207698_10133244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2127	Open in IMG/M
3300026142\|Ga0207698_12243562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300026555\|Ga0179593_1138680	All Organisms → cellular organisms → Bacteria	2452	Open in IMG/M
3300027667\|Ga0209009_1156955	Not Available	579	Open in IMG/M
3300027821\|Ga0209811_10199925	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300027903\|Ga0209488_10524853	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300028881\|Ga0307277_10447933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300031251\|Ga0265327_10015413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	4936	Open in IMG/M
3300031996\|Ga0308176_10018317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5178	Open in IMG/M
3300032954\|Ga0335083_10027982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6338	Open in IMG/M
3300033486\|Ga0316624_11519967	Not Available	616	Open in IMG/M
3300034268\|Ga0372943_1145188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.91%
Host-Associated	Host-Associated	15.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.13%
Plants	Host-Associated → Plants	15.09%
Aquatic	Environmental → Aquatic	3.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.77%
Freshwater	Environmental → Aquatic → Freshwater	1.89%
Sediment	Environmental → Aquatic → Sediment	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.49%
Loam	Environmental → Terrestrial → Soil → Loam	16.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.77%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.60%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.66%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.77%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.15%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.77%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.77%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.83%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.94%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090004	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005897	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_103	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P1_DRAFT_01218680	2088090004	Soil	LLWQGKVPTVIDASKLVVGDRIVVRIRADKGASLAEIEATAANHVGDREPAAK
L01_05835640	2170459006	Grass Soil	TIFLLWQGRVPTVIDASKLVVGDRIIVRIRAEKGSTLAQVEATAANHIGDREPAAK
F47_10672380	2170459009	Grass Soil	SADQTFAFGSETIFLLWQGKVPTVIDAAHLKVGDRIVVRIRADKGSTLAEVESTAAAHIGDREPKAPSS
deeps_01002450	2199352024	Soil	FLLWQGKVPTVIDASRLVVGDRIVVRIRAAQGSSLAQVEATASNHIGDREPAAAK
INPhiseqgaiiFebDRAFT_1004296983	3300000364	Soil	ETIFLLWQGKVPTVIDASKLVVGDKIVVRIRAPKGSSLAQIEATAANHVGDREPAAK*
INPhiseqgaiiFebDRAFT_1004708492	3300000364	Soil	KVPTVIDASKLVIGDRIVVRIRAAKGASLAQVTSTAANHIGDREPAAKA*
JGI10216J12902_1013105914	3300000956	Soil	IFLLWQGKVPSVIDASKLTLGDRIVVRIRADRGSSLAQVTSTAARKIAEREPAQAR*
A3PFW1_103378123	3300001535	Permafrost	WQGKVPTVIDASKLVVGDRIVVRIRAGKGSSLAQIEATAANHVGDREPAAK*
Ga0063455_1004101231	3300004153	Soil	NTIFLLWQGKVPTVIDSTKLVVGDRIVVRIRAAAKSSLAQVEATAANHIGDREPATSK*
Ga0062590_1022239982	3300004157	Soil	TVIDASKLVVGDKIVVRIRASMGASLGQVESTPANHIGDREPAAKS*
Ga0062595_1004964553	3300004479	Soil	DTIFLLWQGKVPTVIDASKLVVGDRIVVRIRAAKGASLAQVESTPARHIGDREPASSS*
Ga0062595_1015737341	3300004479	Soil	KVPTVIDASKLVVGDRIVVRIRADKGASLSTVLATPANHIGDREPATSK*
Ga0062594_1006516523	3300005093	Soil	IFLLWQGKVPTVIDASKLVVGDRIVVRIRAAQGSSLAQVEATASNHIGDREPAAAK*
Ga0062594_1019939921	3300005093	Soil	FLLWQGKVPTVIDASKLVVGDRIVVRIRAAAHSSLAQVEATAANHVGDREPASKS*
Ga0066676_103179051	3300005186	Soil	FTYDDGTIFLLWQGKVPTVIDASKLVVGDRIVVRIRAPKDATLAQVEATTANHIGDREPAKTP*
Ga0066675_102844041	3300005187	Soil	VIDASKLVVGDRIVVRIRAPRDATLAQVEATAANHIGDREPPAAP*
Ga0070659_1019413652	3300005366	Corn Rhizosphere	GDDTIFLLWQGKVPTVIDASKLVVGDRIVVRIRAAANSSLAQVAATAARHVGDREPASK*
Ga0070714_1007068213	3300005435	Agricultural Soil	GKVPTVIDASKLVVGDRIVVRIRAAANASLAQVTATAARHVGDREPAK*
Ga0070708_1022500791	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	STIFLLWQGKVPSVIDAAHLKVGDKIVVRIRADKGSTLAQVESTAAAHIGDREPAAPSS*
Ga0066687_108032412	3300005454	Soil	PTVIDASKLVVGDKIVVRIRADKGSTLAQVEATAANHIGDREPAAKS*
Ga0070681_104802023	3300005458	Corn Rhizosphere	DASKLVVGDRIVVRIRSEAGSSLSEVESSPARHVGDKEPASAQ*
Ga0070698_1003949871	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	TIFLLWQGKVPSVIDAAHLKVGDKIVVRIRADKGSTLAQVESTAAAHIGDREPAAPSS*
Ga0073909_105461511	3300005526	Surface Soil	TIFLLWQGKVPTVIDASKLVVGDRIVVRIRADKGATLPQVVATPANHVGDREPAAK*
Ga0070679_1006381211	3300005530	Corn Rhizosphere	DDTIFLLWQGKVPTVIDASKLVVGDRIVVRVRAEAGSSLAQAEASPARHVGDREPADAK*
Ga0070739_105124061	3300005532	Surface Soil	WQGKVPTVIDATKLVVGDRIVVRVRADAHSTLAQVESTAAAHVGDREPAA*
Ga0070732_106730782	3300005542	Surface Soil	PTVIDASKLVVGDKIVVRIRAPKGASLGTVESTPARHIGDREPASK*
Ga0066701_100775044	3300005552	Soil	LLWQGKVPTVIDASKLVVGDRIVVRIRAAMGSSLAQVESTAANHVGDREPAAKS*
Ga0066707_103468231	3300005556	Soil	IDASKLVVGDRIVVRIHAPKDTTLAQVEATAANNIGDREPAKTP*
Ga0068855_1016623372	3300005563	Corn Rhizosphere	ETFSTGDDTIFLLWQGKVPTVIDASKLVVGDRIVVRIRAAANASLAQVTATAARHVGDREPAK*
Ga0066705_101801381	3300005569	Soil	TIFLLWQGKVPSVIDATKLVVGDRIVVRIRAAMGSSLAEVESTAANHIGDREPAAKS*
Ga0066702_104843641	3300005575	Soil	WQGKVPSVIDATKLVVGDRIVVRIRAAMGSSLAEVESTAANHIGDREPAAKS*
Ga0066706_103258793	3300005598	Soil	PTVIDASKLVVNDRIVVRIRAAMGSSLAQVESTAANHIGDREPAAKS*
Ga0068856_1003309784	3300005614	Corn Rhizosphere	FTTGGDTIFLLWQGKVPTVIDASKLVVGDRIVVRIRAAAHSSLAQVEATAANHVGDREPASKS*
Ga0066903_1003318691	3300005764	Tropical Forest Soil	FAFGDDTIFLLWQGKVPTVIDATKLVVGDRIVVRIRAPRGSSLQQVEATAARHIGDREPASAP*
Ga0075281_10409482	3300005897	Rice Paddy Soil	TIFLLWQGKVPTVISLSQLRVGDRVVVRIRAAKGSTLAQVESTAAVHVGDREPATQK*
Ga0066651_101578563	3300006031	Soil	TVIDASKLVVGDRIVVRIRAPRDATLAQVEATAANHIGDREPPATP*
Ga0070716_1008959171	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	IFLLWQGKVPTVIDASKLVVGDRIVVRIRAARGSSLAQVEATAANHIGDREPPAK*
Ga0070712_1019813961	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	WQGKVPSVIDAAHLKVGDKIVVRIRADKGSTLAQVESTAAAHIGDREPAAPSS*
Ga0075522_102277863	3300006638	Arctic Peat Soil	ETIFLLWQGRVPTVIDASKLVVGDKIVVRIRADKGSTLAQIEATAANHVGDREPASK*
Ga0066653_101112791	3300006791	Soil	GKVPPVIDASKLVVGDRIVVRVRAARGSSLAQVESTAARHIGDREPASKP*
Ga0075520_11906903	3300006795	Arctic Peat Soil	FLLWQGKVPTVIDASKLVVGDKIVVRIRADKGSSLAQVEATAATHVGDREPASK*
Ga0066659_109518482	3300006797	Soil	LLWQGKVPSVIDASKLVVGDRIVVRVRAAMGSSLAQVESTAANHIGDREPAAKS*
Ga0075433_110291842	3300006852	Populus Rhizosphere	TIFLLWQGKVPTVIDASKLVVGDRIVVRIRAAAGSSLAQVEATAANHVGDREPASKS*
Ga0075425_1003280121	3300006854	Populus Rhizosphere	TIFLLWQGKVPTVIDATKLVVGDRIVVRIRAPKGAALAQVEATPANHIGDREPPSAK*
Ga0066710_1017514831	3300009012	Grasslands Soil	LSWQGKVPTVIDASKLVVGDRIVVRIRAARGASLGEVESTPANHIGDREPAAK
Ga0099829_107571851	3300009038	Vadose Zone Soil	FGASTIFLLWQGKVPTVIDSSKLGVGDRIVVRIRAAMGSSLAQVESTAANHIGDREPAAKS*
Ga0099829_116392442	3300009038	Vadose Zone Soil	FGSETIFLLWQGKVPIVIDPSKLVVGDKIIVRIRADKGSSLSQVESTPANHIGDREPAAK
Ga0099827_108611501	3300009090	Vadose Zone Soil	IFLLWQGKVPSVIDSSKLVVGDKIVIRIRADKGSSLAQVEATAANHIGDREPAAKS*
Ga0099827_111544741	3300009090	Vadose Zone Soil	DTIFLLWQGKVPTVIDASKLVVGDRIVVRIRAPKGASLAQVEASPARHIGDREPAAGS*
Ga0105240_127479121	3300009093	Corn Rhizosphere	LLWQGKVPTVIDQTKLVAGDRIVVRIRAKAGSSLAQVESTPANHVGDREPANAR*
Ga0126318_102674301	3300010152	Soil	TIFLLWQGKVPTVIDASKLVVGDRIVVRIRAAATSSLAQVESSAARHIGDREPAA*
Ga0127503_109938011	3300010154	Soil	TTIFLLWQGKVPTVIDASKLVPGDRIVVRIRAARGASLGTVLATPANHIGDREPATAK*
Ga0134066_103566402	3300010364	Grasslands Soil	WQGKVPTVIDASKLVVGDRIVVRVRAARGSSLAQVESTAARHIGDREPASKP*
Ga0134128_107396363	3300010373	Terrestrial Soil	STGGDTIFLLWQGKVPTVIDASKLVVGDRIVVRIRAAANASLAQVAATAARHVGDREPAQ
Ga0137388_102859534	3300012189	Vadose Zone Soil	GSETIFLLWQGKVPTVIDSSKLVVGDKIIVRIRADKGSSLAQVEATAANHIGDREPAAKS
Ga0137371_107411241	3300012356	Vadose Zone Soil	GTIFLLWQGKVPTVIDASKLVAGDRIVVRIRAPKDATLAQVEATAANHIGDREPAKTP*
Ga0137385_107895963	3300012359	Vadose Zone Soil	QGKVPTVIDASKLVVGDRIVVRIRADRGASLGDVESTPANHIGDREPASK*
Ga0137361_108809363	3300012362	Vadose Zone Soil	IDATKLVPHDRIVIRIRAAMGSSLAQVESTAANHIGDREPPATP*
Ga0137390_103321904	3300012363	Vadose Zone Soil	FLLWQGKVPTVIDASKLVVGDRIVVRIRADKGASLSTVLATPANHIGDREPASK*
Ga0137413_103039601	3300012924	Vadose Zone Soil	PTVIDASKLVVGDRIVVRIRAAAKSSLGEVESTPANHIGDREPAPAK*
Ga0137407_123510721	3300012930	Vadose Zone Soil	QTFTFGDTTIFLLWQGKVPTVIDASKLVVGDRIVVRIRAAGGSSLSTVLATPANHIGDREPAISK*
Ga0137410_114209201	3300012944	Vadose Zone Soil	SNDQTFAFGETSIFLLWQGKVPTVIDASKLTVGDRIVVRIRADRGSSLAEIQAKAATKVAEREPKA*
Ga0134110_105298861	3300012975	Grasslands Soil	QTFTFGSETIFLLWQGKVPTVIDASKLVVGDRIVVRIRAAAGASLGDVEATPANHIGDREPANTK*
Ga0164308_107435851	3300012985	Soil	SFTFGSSTIFLLWQGKVPTVIDASKLVVGDRIVVRIRAARGSSLAQVEATAANHVGDREPPAK*
Ga0164304_107323043	3300012986	Soil	KVPTVIDASKLVVGDKIVVRIRAAMGASLGQVESTPANHIGDREPAAKS*
Ga0157373_105889551	3300013100	Corn Rhizosphere	GDQSFTFGDGTIFLLWQGKVPTVIDASKLVIGDRIVVRIRADRGASLAQVESTAAKHIGDREK*
Ga0157373_111787061	3300013100	Corn Rhizosphere	TIFLLWQGKVPTVIDASKLVVGDRIVVRIRAAANASLSQVTATAARHVGDREPATSK*
Ga0157370_111091741	3300013104	Corn Rhizosphere	TIFLLWQGKVPTVIDASKLVVGDRIVVRIRAAQGSSLAQVEATASNHIGDREPAAAK*
Ga0157369_110444283	3300013105	Corn Rhizosphere	FTTGGDTIFLLWQGKVPTVIDASKLVVGDRIVVRIRAAAHSPLAQVEATAANHVGDREPASKS*
Ga0120158_102432463	3300013772	Permafrost	GETIFLLWQGKVPTVIDASKLVVGDRIVIRIRSEKGSSLSQVEATAANHIGDREPATATAP*
Ga0134078_104642882	3300014157	Grasslands Soil	VIDATKLVVGDRIVVRIRAAMGSSLAQVESTAAKHIGDREPAGKS*
Ga0182005_12807721	3300015265	Rhizosphere	GKVPTVIDASKLVVGDRIVVRIRAAAKSSLAQVEATAANHIGDREPATAK*
Ga0134085_106285891	3300015359	Grasslands Soil	QPFTFGENTIFLLWQGKVPSVIDASKLAIGDRIVVRIRADKGSTLAQVTSTAAAKIAEREPPQAK*
Ga0187775_102856312	3300017939	Tropical Peatland	FGDQTIFLLWQGKVPTVIQASQLKVGDRIVVRVRADRGSSLAQVEATPAVHVGDREPATATAP
Ga0187786_101252352	3300017944	Tropical Peatland	FAFGDQTIFLLWQGKVPTVIQASQLKIGDRIVVRVRADRGSSLAQVEATPAVHIGDREPATATAP
Ga0187786_102743122	3300017944	Tropical Peatland	VISASQLKVGDRIVVRVRADRGSSLAQVESTPAVHIGDREPASQP
Ga0187785_104188932	3300017947	Tropical Peatland	TVISASQLKVGDRIVVRVRAAKGSSLAQIESTPAKHIGDREPANAP
Ga0184605_103852461	3300018027	Groundwater Sediment	LLWQGKVPTVIDASKLVVGDRIVVRIRAARGSSLAQVESTAANHIGDREPPAKS
Ga0184618_103353841	3300018071	Groundwater Sediment	LLWQGKVPTVIDASKLVVGDRIVVRIRAAMGSSLAQVESTAANHIGDREPPAK
Ga0066667_121628332	3300018433	Grasslands Soil	WQGKVPTVIDATKLVAGDRIVVRIRAPKGATLAQVESTPANHIGDREPPAAK
Ga0066662_106000573	3300018468	Grasslands Soil	IFLLWQGKVPTVIDASKLVVNDRIVVRIRAAMGSSLAQVESTAANHIGDREPAAKS
Ga0197907_102137703	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	PTVIDASKLVVGDRIVVRIRAAKGASLAQVESTPARHIGDREPASSS
Ga0206351_106120652	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	GKVPTVIDASKLVVGDRIVVRIRAAAKSSLAQVEATAANHVGDREPASKS
Ga0209483_11610131	3300025862	Arctic Peat Soil	ETIFLLWQGRVPTVIDASKLVVGDKIVVRIRADKGSTLAQIEATAANHVGDREPASK
Ga0207684_106451963	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	GKVPSVIDAAHLKVGDKIVVRIRADKGSTLAQVESTAAAHIGDREPPAPSS
Ga0207707_103750261	3300025912	Corn Rhizosphere	TIFLLWQGKVPTVVDASKLVVGDRIVVRIRSEAGSSLSEVESSPARHVGDKEPASAQ
Ga0207707_109174851	3300025912	Corn Rhizosphere	LLWQGKVPTVIDPAKLVVGDRIVVRIRAAMGSSLAQVESTAANHIGDREPATAP
Ga0207663_115960711	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	QSRTESFTFDDGTIFLLWQGKVPTVIDATKLVVGDRIVVRIRAEKGASLAQVAATAANHIGDREQAATS
Ga0207646_107480793	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	QTFTFGSETIFLLWQGKVPTVIDPSKLVVGDKIVVRIRADKDSTLAQIEATAANHIGDREPAAKS
Ga0207664_104193673	3300025929	Agricultural Soil	KVPTVIDASKLVVGDRIVVRIRAAANASLAQVTATAARHVGDREPAK
Ga0207644_108638783	3300025931	Switchgrass Rhizosphere	TESFTFGEGTIFLLWQGKVPTVIDATKLVVGDKIVVRIRAEKGASLAQVASTAANHIGDREPAATS
Ga0207690_112598702	3300025932	Corn Rhizosphere	PTVIDASKLVVGDKIVVRIRASMGASLGQVESTPANHIGDREPAAKS
Ga0207665_107950942	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	FTFGSSTIFLLWQGKVPTVIDASKLVVGDRIVVRIRAARGSSLAQVEATAANHIGDREPPAK
Ga0207698_101332444	3300026142	Corn Rhizosphere	SETFSTGDDTIFLLWQGKVPTVIDASKLVVGDRIVVRIRAAANSSLAQVAATAARHVGDREPASK
Ga0207698_122435622	3300026142	Corn Rhizosphere	FSFGDDTIFLLWQGKVPTVIDASKLVVGDRIVVRIRAAKGASLAQVESTPARHIGDREPASSS
Ga0209153_11654343	3300026312	Soil	PTVIDASKLVVGDKIVVRIRAPRGATLAQVESTPANHVGDREPAAK
Ga0179593_11386804	3300026555	Vadose Zone Soil	GRGGVPTVIDASKLVAGDRIIVHIRAEKGSTLAQVEATAANHIGDREPAAK
Ga0209009_11569552	3300027667	Forest Soil	PTVIDASKLVVHDRIVIRIRAAMGSSLAQVESTAANHIGDREPATK
Ga0209811_101999251	3300027821	Surface Soil	ADQTFTVGGETIFLLWQGKVPTVIDASKLVVGDKIVVRIRAPKGSSLAQIEATAANHVGDREPAAK
Ga0209488_105248533	3300027903	Vadose Zone Soil	WQGKVPTVIDASKLVVGDKIVVRIRADKGSSLAQVESTAAAHIGDREPATKS
Ga0307277_104479331	3300028881	Soil	ENTIFLLWQGKVPTVIDASKLVVGDKIVVRIRADKGASLGQVESTPANHVGDREPAAKA
Ga0265327_100154131	3300031251	Rhizosphere	DQSFAFGDQTIFLLWQGKVPTVISASQLKVGDRIVVRVRADRGSSLAQVESTAAVHIGDREPASQP
Ga0308176_100183171	3300031996	Soil	LLWQGKVPTVIDASKLVVGDRIVVRIRAAKGASLAQVESTPARHIGDREPASSS
Ga0335083_100279821	3300032954	Soil	FLLWQGKVPTVIAFSQLNVGDNVVVRIRAPRHSSLAKVESTAAVHVGDREPASS
Ga0316624_115199671	3300033486	Soil	KVPTVISASQLKVGDRIVVRVRADRGSSLAQVESTPAVHIGDREPASQP
Ga0372943_1145188_316_519	3300034268	Soil	STSDQTFSYGDDTIVLLWQGKVPTVIDASKLVVGDRIVVRIRAPKGASLAQVASTPANHIGDREPAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094277

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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