Metagenome / Metatranscriptome Family F094264

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094264
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	82 residues
Representative Sequence	QYAGTYGAPAFPGAVVSLEGSRLMIDPGGAGKIPLTAHSENSFTMEGTGVEFVKDAKGAVNAMIQHWTEGDRYFARRK
Number of Associated Samples	92
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	95.28 %
% of genes from short scaffolds (< 2000 bps)	94.34 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.113 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.038 % of family members)
Environment Ontology (ENVO)	Unclassified (19.811 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.717 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 49.06% Coil/Unstructured: 50.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF11954	DUF3471	5.66
PF07969	Amidohydro_3	2.83
PF07690	MFS_1	2.83
PF00756	Esterase	1.89
PF01144	CoA_trans	1.89
PF07228	SpoIIE	1.89
PF13620	CarboxypepD_reg	1.89
PF01425	Amidase	1.89
PF01850	PIN	0.94
PF07366	SnoaL	0.94
PF13414	TPR_11	0.94
PF13673	Acetyltransf_10	0.94
PF01799	Fer2_2	0.94
PF01070	FMN_dh	0.94
PF16694	Cytochrome_P460	0.94
PF13669	Glyoxalase_4	0.94
PF02894	GFO_IDH_MocA_C	0.94
PF02823	ATP-synt_DE_N	0.94
PF12867	DinB_2	0.94
PF03069	FmdA_AmdA	0.94
PF05163	DinB	0.94
PF13360	PQQ_2	0.94
PF08818	DUF1801	0.94
PF00401	ATP-synt_DE	0.94
PF01243	Putative_PNPOx	0.94
PF00903	Glyoxalase	0.94
PF01168	Ala_racemase_N	0.94
PF01979	Amidohydro_1	0.94
PF02211	NHase_beta	0.94
PF00072	Response_reg	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.89
COG0355	FoF1-type ATP synthase, epsilon subunit	Energy production and conversion [C]	1.89
COG1788	Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit	Lipid transport and metabolism [I]	1.89
COG2057	Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit	Lipid transport and metabolism [I]	1.89
COG4670	Acyl CoA:acetate/3-ketoacid CoA transferase	Lipid transport and metabolism [I]	1.89
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.94
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.94
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.94
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.94
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.94
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.94
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.11 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.11 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.11 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	84.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.72 %
Unclassified	root	N/A	1.89 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.94 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.32 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.60 %
Unclassified	root	N/A	1.89 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.32 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.89 %
Unclassified	root	N/A	1.89 %
Kangiellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales	0.94 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.94 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.94 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.94 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.94 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.32 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Unclassified	root	N/A	1.89 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.94 %
Kangiellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales → Kangiellaceae	0.94 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.94 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.94 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.94 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.32 %
Unclassified	root	N/A	1.89 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.94 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.94 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.94 %
Kangiella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales → Kangiellaceae → Kangiella	0.94 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.94 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.94 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.32 %
Unclassified	root	N/A	1.89 %
Terriglobus saanensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	0.94 %
Kangiella koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales → Kangiellaceae → Kangiella → Kangiella koreensis	0.94 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.94 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.94 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.94 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.94 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.32 %
Unclassified	root	N/A	1.89 %
Croceibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Croceibacter	0.94 %
Terriglobus saanensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	0.94 %
Kangiella koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales → Kangiellaceae → Kangiella → Kangiella koreensis	0.94 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.94 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.94 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.94 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.32 %
Unclassified	root	N/A	1.89 %
Croceibacter atlanticus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Croceibacter → Croceibacter atlanticus	0.94 %
Terriglobus saanensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	0.94 %
Kangiella koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales → Kangiellaceae → Kangiella → Kangiella koreensis	0.94 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.94 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.94 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.94 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_170894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Kangiellales → Kangiellaceae → Kangiella → Kangiella koreensis	501	Open in IMG/M
3300001356\|JGI12269J14319_10277920	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300004152\|Ga0062386_101683120	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300005345\|Ga0070692_11126204	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300005435\|Ga0070714_101568923	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300005459\|Ga0068867_101134622	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300005538\|Ga0070731_10561433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300005542\|Ga0070732_10214629	All Organisms → cellular organisms → Bacteria → Acidobacteria	1151	Open in IMG/M
3300005542\|Ga0070732_10243037	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300005548\|Ga0070665_100015809	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7580	Open in IMG/M
3300006052\|Ga0075029_100578936	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300006173\|Ga0070716_101517668	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300006794\|Ga0066658_10502020	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300006881\|Ga0068865_100612890	All Organisms → cellular organisms → Bacteria → Acidobacteria	921	Open in IMG/M
3300006903\|Ga0075426_11016074	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	627	Open in IMG/M
3300009093\|Ga0105240_11878520	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300009098\|Ga0105245_10504799	All Organisms → cellular organisms → Bacteria → Acidobacteria	1226	Open in IMG/M
3300009148\|Ga0105243_12703007	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300009523\|Ga0116221_1164060	All Organisms → cellular organisms → Bacteria → Acidobacteria	966	Open in IMG/M
3300009824\|Ga0116219_10791573	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300010048\|Ga0126373_11114292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300010333\|Ga0134080_10119202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1099	Open in IMG/M
3300010376\|Ga0126381_100772463	All Organisms → cellular organisms → Bacteria → Acidobacteria	1378	Open in IMG/M
3300010379\|Ga0136449_101292619	All Organisms → cellular organisms → Bacteria → Acidobacteria	1138	Open in IMG/M
3300010397\|Ga0134124_12928350	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300011120\|Ga0150983_11058807	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300011120\|Ga0150983_12277360	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300011120\|Ga0150983_13830501	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	640	Open in IMG/M
3300011120\|Ga0150983_14929171	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300011120\|Ga0150983_15102654	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300011120\|Ga0150983_16358058	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300012200\|Ga0137382_10763089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300012203\|Ga0137399_11474257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300012349\|Ga0137387_11261222	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300012363\|Ga0137390_10162696	All Organisms → cellular organisms → Bacteria	2219	Open in IMG/M
3300012922\|Ga0137394_10493784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300012960\|Ga0164301_11769027	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300013832\|Ga0120132_1126873	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300014169\|Ga0181531_10879067	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300014489\|Ga0182018_10248233	All Organisms → cellular organisms → Bacteria → Acidobacteria	980	Open in IMG/M
3300014838\|Ga0182030_11615855	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300015167\|Ga0167661_1085297	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	567	Open in IMG/M
3300017936\|Ga0187821_10392181	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300017943\|Ga0187819_10461112	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300017955\|Ga0187817_10618616	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300017975\|Ga0187782_10542548	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300017995\|Ga0187816_10555311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300018042\|Ga0187871_10776755	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300018085\|Ga0187772_10829829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300020580\|Ga0210403_10276833	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Croceibacter → Croceibacter atlanticus	1376	Open in IMG/M
3300020580\|Ga0210403_10400903	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300020580\|Ga0210403_10873460	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300020583\|Ga0210401_11026136	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300021088\|Ga0210404_10898436	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300021168\|Ga0210406_10509698	All Organisms → cellular organisms → Bacteria → Acidobacteria	950	Open in IMG/M
3300021181\|Ga0210388_11099960	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300021401\|Ga0210393_10719198	All Organisms → cellular organisms → Bacteria → Acidobacteria	814	Open in IMG/M
3300021420\|Ga0210394_10491085	All Organisms → cellular organisms → Bacteria → Acidobacteria	1080	Open in IMG/M
3300021474\|Ga0210390_10626308	All Organisms → cellular organisms → Bacteria → Acidobacteria	900	Open in IMG/M
3300021477\|Ga0210398_10495306	All Organisms → cellular organisms → Bacteria → Acidobacteria	995	Open in IMG/M
3300021477\|Ga0210398_11411130	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300022724\|Ga0242665_10385353	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300023250\|Ga0224544_1039309	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300025905\|Ga0207685_10556525	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	610	Open in IMG/M
3300025929\|Ga0207664_11467433	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300025934\|Ga0207686_10300814	All Organisms → cellular organisms → Bacteria → Acidobacteria	1191	Open in IMG/M
3300025949\|Ga0207667_11085955	All Organisms → cellular organisms → Bacteria → Acidobacteria	784	Open in IMG/M
3300026089\|Ga0207648_11120310	All Organisms → cellular organisms → Bacteria → Acidobacteria	738	Open in IMG/M
3300027706\|Ga0209581_1098789	All Organisms → cellular organisms → Bacteria → Acidobacteria	1004	Open in IMG/M
3300027842\|Ga0209580_10479797	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300027846\|Ga0209180_10739003	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300027905\|Ga0209415_10079302	All Organisms → cellular organisms → Bacteria → Proteobacteria	3803	Open in IMG/M
3300027905\|Ga0209415_10252816	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1582	Open in IMG/M
3300027908\|Ga0209006_11163289	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300028536\|Ga0137415_11320250	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300028799\|Ga0307284_10263953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300029636\|Ga0222749_10245735	All Organisms → cellular organisms → Bacteria → Acidobacteria	909	Open in IMG/M
3300029636\|Ga0222749_10708064	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300030058\|Ga0302179_10197164	All Organisms → cellular organisms → Bacteria → Acidobacteria	889	Open in IMG/M
3300030520\|Ga0311372_10524900	Not Available	1727	Open in IMG/M
3300030659\|Ga0316363_10401833	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300031057\|Ga0170834_113733884	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300031234\|Ga0302325_12529011	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300031236\|Ga0302324_101155153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1036	Open in IMG/M
3300031474\|Ga0170818_113184149	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300031595\|Ga0265313_10209048	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300031715\|Ga0307476_11039270	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300031718\|Ga0307474_10922814	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300031720\|Ga0307469_11994723	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300031720\|Ga0307469_12534781	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	501	Open in IMG/M
3300031793\|Ga0318548_10605240	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300031912\|Ga0306921_10514567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1391	Open in IMG/M
3300031954\|Ga0306926_10463661	All Organisms → cellular organisms → Bacteria → Acidobacteria	1560	Open in IMG/M
3300031954\|Ga0306926_12293565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300031962\|Ga0307479_11406878	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300032055\|Ga0318575_10254212	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M
3300032076\|Ga0306924_11566965	All Organisms → cellular organisms → Bacteria → Acidobacteria	696	Open in IMG/M
3300032076\|Ga0306924_12023192	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300032160\|Ga0311301_10026933	All Organisms → cellular organisms → Bacteria → Proteobacteria	15366	Open in IMG/M
3300032261\|Ga0306920_102097381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	789	Open in IMG/M
3300032515\|Ga0348332_11610781	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300032782\|Ga0335082_10610871	All Organisms → cellular organisms → Bacteria → Acidobacteria	952	Open in IMG/M
3300032805\|Ga0335078_10210991	All Organisms → cellular organisms → Bacteria → Acidobacteria	2685	Open in IMG/M
3300032829\|Ga0335070_11670625	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300033433\|Ga0326726_11896936	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.62%
Host-Associated	Host-Associated	10.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.08%
Plants	Host-Associated → Plants	10.38%
Aquatic	Environmental → Aquatic	7.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.47%
Freshwater	Environmental → Aquatic → Freshwater	6.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.60%
Peat	Environmental → Terrestrial → Peat	5.66%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.77%
Sediment	Environmental → Aquatic → Sediment	0.94%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.60%
Loam	Environmental → Terrestrial → Soil → Loam	12.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.60%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.66%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.72%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.04%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.55%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.66%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.77%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.94%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.94%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.94%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.94%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.94%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.94%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015167	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11b, vegetated hydrological feature)	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_03161770	2199352024	Soil	GKSGEEVRVPREILAQYAGVYGTSAQPADIVVSLEEGPLYDQYGRRREDPLVAHAANSFTMEGTGVEFVKDAQGAVTAMIQHWVEGDRNFARRR
JGI12269J14319_102779202	3300001356	Peatlands Soil	TPGSFLQTTVVSLEGNRLMIDPGAGKIPLVAHSETSFTMEGTGVEFVKDKKGEVAMIQHWVEGDRYFARKK*
Ga0058897_100602821	3300004139	Forest Soil	CENERDAPHLVGKSGEEFRVPAEVLAQYSGTYGTPELPVVVSLQGSRLMIESGGAGKIPLIAHAENSFTMEGTGVDFATDAKGAVSEMIQHWSEGDRYFPRKK*
Ga0062386_1016831202	3300004152	Bog Forest Soil	SGEEFHVPAEVLAQYAGTYVSAASVAIVSLDGSRLMVDPGGAGKIPLIARSENTFTMEGTFVEFVKDAKGAVTAMIQGWVEGDRKYARKE*
Ga0070692_111262041	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VLAEYAGMYGSPTLSSDIVIALEESRFTINTGGAGKIPLIAHSENSFTMEGTGVEFVKDAKGAVIAMIQHWVEGDRYFARRK*
Ga0070714_1015689232	3300005435	Agricultural Soil	EEFRVPREVLAEYAGMYGSPTLSSDIVIALEESRFTINTGGAGKIPLIAHSENSFTMEGTGVEFVKDAKGAVIAMIQHWVEGDRYFARRK*
Ga0068867_1011346221	3300005459	Miscanthus Rhizosphere	VSLEGSRLTIDTGNTKIPLVAHSQTSFTMEGTGVDFIRGANGAVTNMIQHWTEGDRDYVRKE*
Ga0070731_105614331	3300005538	Surface Soil	IVVSWEDSRFCINTSGGGKIPLVAHSENNFTMEGTGVDFVRDEKGAVTAMIQHWVEGDRYFPRKK*
Ga0070732_102146293	3300005542	Surface Soil	FAGAYDSRDPFFNGVAEVITLEGGRLMINPGAGKVPLIARSENSFTMEGTGVEFVKDANGAVTTMVQHWTETDRYFTRRK*
Ga0070732_102430372	3300005542	Surface Soil	PAEVLAQYAGIYQAPGVPVAIASLEGSRLMIDSGGAGKIPLIAHSENTFTMEGTGVEFVKDARGAVTAMIEHWSEGDRNYARRK*
Ga0070665_1000158091	3300005548	Switchgrass Rhizosphere	MPGFPLAVVSLEGSRLTIDTGNTKIPLVAHSQTSFTMEGTGVDFIRGANGAVTNMIEHWTEGDRDYVRKE*
Ga0075029_1005789361	3300006052	Watersheds	VLTQYIGRYEMPGFPAAAISIEGTHLMIDTGNTKIPLVAHSPSSFTMEGTGVDFVRDAKGAVSDMIEHWTEGDRDYVRRR*
Ga0070716_1015176682	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VPVVVTLEASRLMIDTGSGKVPLIAHSETSFTMEGTGVDFVKDAKGAVTTMIQHWTEMDRYFARKK*
Ga0066658_105020201	3300006794	Soil	ESPAFAPGIVISLEGNRLVIDSGTGRVPLIAHGENSFTMEGTGVEFSKDAKGAVTGMLQHWTETDRYFPRRK*
Ga0068865_1006128901	3300006881	Miscanthus Rhizosphere	AYQAPERPVTIVSLEGNRLMVAEGRAGKIPLIARSEDTFTMEGTGVEFVKDAKGAVSAMIEHWTEGDRNYARRK*
Ga0075426_110160741	3300006903	Populus Rhizosphere	VLAQYAGTYEAPAAPIIVSLEGSRLMIDIGAGKMPLIAHAENSFTMEGTGVEFVKDAKGAVTAMIQHWTENDRYFARRR*
Ga0105240_118785202	3300009093	Corn Rhizosphere	YEMPGFPLAVVSLEGSRLTIDPGTTKIPLVAHSQTSFTMEGTGVDFIRGANGAVTNMIQHWTEGDRDYVRKE*
Ga0105245_105047992	3300009098	Miscanthus Rhizosphere	EVRVPREILAQYAGVYGTSAQPADIVVSLEEDRFTINTGGGGKIPLVAHAANSFTMEGTGVEFVKDAQGAVTAMIQHWVEGDRNFARRR*
Ga0105243_127030072	3300009148	Miscanthus Rhizosphere	VYGTSAQPADIVVSLEEDRFTINTGGGGKIPLVAHAANSFTMEGTGVEFVKDAQGAVTAMIQHWTEGDRYFPRRK*
Ga0116221_11640602	3300009523	Peatlands Soil	MSADCAAASSLGGADIVVSLDGSLFTINTSGGGKIPLIAHSESNFTMEGTGVDFVRDAKGAVTAMIQHWVEGDRYIARAR*
Ga0116219_107915731	3300009824	Peatlands Soil	TYGADIVVSLDGSLFTINTSGGGKIPLIAHSASNFTMEGTGVDFVRDAKGAVTAMIQHWVEGDRYIARTK*
Ga0126373_111142921	3300010048	Tropical Forest Soil	PSEVLAQYIGTYEAPALPAPVMVSLEGSRLMIDPGAGKIPLVAHSETSFTMEGTGVDFVRDANGVVTAMIQHWTEGDRNYARKK*
Ga0134080_101192021	3300010333	Grasslands Soil	PHLIGKSGEEAHVPAEVLAQYAGTYETTGSVVRIPEVISFEGNRLMINPGAGKIPLIAHAENDFTMEGTGVEFVKDAKGAVTAMIQHWTEGDRYFARRK*
Ga0126381_1007724633	3300010376	Tropical Forest Soil	VRGRLGPLHVSVPAEVLAQYVGVYETRGLPEGTPVTLEGDRLMIDPGGAGKIPLVAHSENSFTMEGTGVEFVKDSSGAVTAMIQHWTEGDHYHRRLK*
Ga0136449_1012926193	3300010379	Peatlands Soil	APHLVGKSGEEYRVPAEILSKYAGMYGSPGSPTDIVVSWEGGHFTINTGGGGKIPLVAHSETNFTMEGTGVDFVKDSKGAVTAMIQHWVEGDRYFARAK*
Ga0134124_129283502	3300010397	Terrestrial Soil	GRYEMPGFPIAAISLEGNRLMIDSGNGKIPLVAHSESSFTMEGTGVDFVRDAKGAVSSMIEHWTEGDRDYVRRK*
Ga0150983_110588071	3300011120	Forest Soil	GKSGEEFRVPAEVLAKYAGTYGTPELPVVVSLQGSRLMIESGGAGKIPLIAHAETSFTMEGTGVDFAKDAEGAVTEMIQHWSEGDRYFPRKK*
Ga0150983_122773602	3300011120	Forest Soil	PELPVVVSLQGSRLMIESGGAGKIPLIAHAENSFTMEGTGVDFATDAKGAVSEMIQHWSEGDRYFPRKK*
Ga0150983_138305012	3300011120	Forest Soil	SLEGGRLMLDPGAGKMPLIAHSESSFTMEGTGVDFVKDSKGAVTAMIQHWTEGDRYLARTKDPSK*
Ga0150983_149291711	3300011120	Forest Soil	QYAGTYASGPASVAIVSVEGSRLMVDTGGTGKIPLIAHSENTFTMEGTFVEFVKDAKGAVNAMIQGWVEGDRKFARTK*
Ga0150983_151026541	3300011120	Forest Soil	IEYVCENERDKSHLVGASGEEFHVPVEVLAQYAGTYASGPSSVEVVSLEGGRLTVDTGGTGKIPLIAHSVNTFTMEGTFVEFVKDTKGAVISMIQSWVEGDRTYARKK*
Ga0150983_163580581	3300011120	Forest Soil	LVGKSTEEFHVPAEVLVQYAGTYEGPTSSSPFCAGCSGEKVFLEGGRLMIDPGAGKIPLIARSETTFTMEGTGVDFVKDAKGQVTVMVQHWTEGDRYFPRKR*
Ga0137382_107630892	3300012200	Vadose Zone Soil	PAEVLAKYVGTYDTTQFPEGIVISLEGSRIMINPGGAGKIPLVAHAENSFTMEGTGVEFVKDANGAVIAMIQHWSEGDRYARRRK*
Ga0137399_114742572	3300012203	Vadose Zone Soil	PTAAVVSLEGNRLSVDLGGAGRIPLIARSENTFTMEGTFVEFVKDAKGAVISMTQSWVEGDRNYARKK*
Ga0137387_112612221	3300012349	Vadose Zone Soil	AEVLAQYAGTYEGPTSASPFCAGCSGEVVFLEGNTLMIDPGKGKIPLIARSEKSFTMEGTGVEFVKDAKGAVTTMVQHWTEGDRYFPRRK*
Ga0137390_101626961	3300012363	Vadose Zone Soil	LIEYVCENERDAPHLIGKSEEEFHLSAEVLAQYVGTYQNPDPFVGVPEVITFEGERLMINPGAGKIPLIARSESSFTMEGTGVDFVKDAKGAVTTMIQHWTEMDRYFARKK*
Ga0137394_104937841	3300012922	Vadose Zone Soil	TYDTTQFPEGIVISLEGSRIMINPGGAGKIPLVAHAENSFTMEGTGVEFVKDANGVVIAMIQHWSEGDRYMRRRK*
Ga0164301_117690272	3300012960	Soil	DAPHLVGKSAEEFRLPTEALAQFAGTYDSRDPFFNGVAEVITLEGGRLMINPGAGKVPLIARSENTFTMEGTGVEFVKDASGKVTTMVQHWTETDRYFTRRK*
Ga0120132_11268731	3300013832	Permafrost	VTNISLEGNRLMVAEGQAVKIPLVAHSESSFTMEGTGVDFVRDAKGAVRSMIEHWTEGDRDYVRKK*
Ga0181531_108790671	3300014169	Bog	GADIVVSLDASGFKINTGGSGKIPLMAHSETSFTMEGTGVDFVRDSKGAVTTMIERWTEGDRIYTRRK*
Ga0182018_102482331	3300014489	Palsa	EEFRVPAEVLAQYAGTYISGASSAIVSLEGSRLIVDSGGTGKIPLIARSENTFTMEGTFVEFVKDAKGAVTAMIQGWVEGDRKYTRTK*
Ga0182030_116158551	3300014838	Bog	YQAPASPVAIVSLERNRLMIDPGGTGKIPLIARSENTFTMEGTFVEFVKDAKGAVTAMIEGWVEGDRKFARTK*
Ga0167661_10852971	3300015167	Glacier Forefield Soil	QYAGTYGAPAFPGAVVSLEGSRLMIDPGGAGKIPLTAHSENSFTMEGTGVEFVKDAKGAVNAMIQHWTEGDRYFARRK*
Ga0187821_103921812	3300017936	Freshwater Sediment	AVLAQYTGRYEMSGFPVAAISLEGNRLMIDTGSGKIPLIAYSESSFTMEGTGVDFVRDAKGVVSVMIQHWTEGDRPYLRRR
Ga0187819_104611121	3300017943	Freshwater Sediment	RAARSFEFRVAAEVLAQYPGTYTSTEYPPSVISQDGGRLMIDSGAGKVPLIAHSETSFTMEGTGVEFLKDPKRGVTGLVQHWVEGDRYFGRSR
Ga0187817_106186161	3300017955	Freshwater Sediment	VLAQYAGTYVSASTAAIVSLEGSRLTIDPGGTGKIPLIARSENTFTMEGTFVEFVKDAKGAVTAMIEGWVEGDRKYARTK
Ga0187782_105425481	3300017975	Tropical Peatland	NERDKSHLVGKSGEEFSIPAGTLARYAGTYGSSTSPPDVVVTVESSRLWIDTGAGKVPLIAHSETSFTMEGTGVEFVKDPNGAVIALLEHWVEGDRYFARRK
Ga0187816_105553111	3300017995	Freshwater Sediment	EILAQYAGTYDRREFPEREVVSLEGGRLMIEQDKAGKIPLIARSETTFTMEGTGVDFVKDSKGAVTSMIQHWTEGDRYYARKK
Ga0187871_107767552	3300018042	Peatland	LAQYAGTYGSRALPSSIVVSLDGSRLMIDTGAGNVPLIAHSETSFTMEGTGVEFVKDEKGLVTGLVQHWVEGDRPFARSR
Ga0187772_108298291	3300018085	Tropical Peatland	SYESPGLASGIVVSLEEGRLMIDTGVGKVPLIAHSETSFTMEGTGVEFTKDANGAVIQLVEHWVEGDRYFPRAK
Ga0210403_102768331	3300020580	Soil	RVSAEVMAQYAGTYGTPASPADIVVSLGGGRFTINTSGGGAIPLIAHSESSFTMEGTGVEFVKDSKGAVAGMIQHWVEGDRYFARRR
Ga0210403_104009031	3300020580	Soil	GVVVSLEGSRLVISPDGTGKIPLIAHSESNFTMEGTGIDFIKDEKGAVTGMVQHWAEGDRYEARRK
Ga0210403_108734602	3300020580	Soil	EYFCDNERDVPHLVGKSGEEFRISADVLTQFAGSYQAPGRPVIISVEGDRLMLAEGQTGKIPLVAHSENTFTMEGTGIEFLRDAKGAVTTLIEHWAEGDRTYARGK
Ga0210401_110261362	3300020583	Soil	SGEEFRVPADVLAQYGGTYQAAGSPVAIVSLEGSRLMIDPGGTGKIPLIARSENTFTMEGTVVEFVKDAKGAVITMIESWVEGDRSYARKK
Ga0210404_108984361	3300021088	Soil	DLIEYVCENERDRPHLVGKSTEEFHVPAEVLVQYAGTYEGPTSSSPFCAGCSGEKVFLEGDKLMIDPGAGKIPLIARSENTFTMEGTGVEFVKDAKGAVITMVQHWTEGDRYFPRKR
Ga0210406_105096982	3300021168	Soil	EYFCDNERDARHLVGKSGEEFRAPREVLAQYAGTYGSAANDIVVSLEGSSFTINTGGGGKIPLVAHAENSFTMEGTGVEFVRDQKGAVTAMIQHWVEGDRYFARQK
Ga0210388_110999601	3300021181	Soil	YAGAYGSGDVVVSLEGGHLAINTSGGGKIPLIAHSENTFTMEGTGVDFVRDAKGGVIAMTQHWVEGDRYFARKK
Ga0210393_107191982	3300021401	Soil	PTDIVVSLDGSRLMIESSGGGKIPLLAHSETNFTMEGTGVDFVKDAKGAVTAMIQHWVEGDRYFGRAK
Ga0210394_104910851	3300021420	Soil	PASPADIVVSLDGSRLMIDSNGGGKIPLLAHSETNFTMEGTGVDFVKDAKGAVTAMIQHWVEGDRYFARAR
Ga0210390_106263081	3300021474	Soil	AKYVGAYGSPASPADIVVSLDGSRLMIDSNGGGKIPLLAHSETNFTMEGTGVDFVKDAKGAVTAMIQHWVEGDRYFARAR
Ga0210398_104953062	3300021477	Soil	EFRVPREVLAQYVGAYGSPASPADIEVSLEGSRFTINTGGGGKIPLVAHSESTFTMEGTGVEFVKDAKGSVTAMIQHWVEGDRYFARSK
Ga0210398_114111301	3300021477	Soil	AGAYGSGDVVVSLEGGHLAINTSGGGKIPLIAHSENTFTMEGTGVDFVRDAKGAVIAMTQHWVEGDRYFARKK
Ga0242665_103853531	3300022724	Soil	EFRVPAEVLAQYAGTYDGPTSFSPFCAGCSGPVVFLEGGALMIDPGAGKIRLIARSENSFTMEGTGVEFVKDAKGAVTTMIQHWTEGDRYYPRKK
Ga0224544_10393091	3300023250	Soil	SPADIVVSLEGSRLTINTSGGGMIPLIALSETSFTMEGTGVDFVKDANGAVTAMIQHWVEGDRYFARKK
Ga0207685_105565252	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VTTVSLEGNRLMVEEGQAGKIPLTAHSENTFSMEGTDIEFVKDAKGAVIAMIQHWAEGDRNYARTR
Ga0207664_114674331	3300025929	Agricultural Soil	AGMYGSPTLSSDIVIALEESRFTINTGGAGKIPLIAHSENSFTMEGTGVEFVKDAKGAVIAMIQHWVEGDRYFARRK
Ga0207686_103008142	3300025934	Miscanthus Rhizosphere	EYVCENERDKPHLVGTSEEEFGVPAEVLAKYAGTYQGPTPAVVSLEGNRLSVALGGAGKIPLVARSENTFTMEGTFVEFVKDSKGAVISMIQSWVEGDRNYARRK
Ga0207667_110859551	3300025949	Corn Rhizosphere	ERPVTNVSLEGNRLMVAEGQAVKIPLVAHSESSFTMEGTGVDFVKDTKGAVTGMIEHWTEGDRNYPRKK
Ga0207648_111203102	3300026089	Miscanthus Rhizosphere	VSLEGSRLTIDTGNTKIPLVAHSQTSFTMEGTGVDFIRGANGAVTNMIQHWTEGDRDYVRKE
Ga0209581_10987892	3300027706	Surface Soil	AQYVGVYETRGLPQGTPVTLEAGRLMIDPGGAGKIPLIAHGVNSFTMEGTGVEFVKDSSGAVTAMIQHWTEGDRYQRRLK
Ga0209580_104797972	3300027842	Surface Soil	ENERDKSHLIGTSGEEFRIPAEVLAQYAGIYQAPGVPVAIASLEGSRLMIDSGGAGKIPLIAHSENTFTMEGTGVEFVKDARGAVTAMIEHWSEGDRNYARRK
Ga0209180_107390032	3300027846	Vadose Zone Soil	HLIGKSEEEFHVSAEVLAQYVGTYQNPDPFVGVPEVVSFEGGRLMINPGAGKIPLIARSENTFTMEGTGVEFVKDAKGAVTTMIQHWTEMDRYFARKK
Ga0209415_100793021	3300027905	Peatlands Soil	VVSLDGSLFTINTSGGGKIPLIAHSESNFTMEGTGVDFVRDAKGAVTAMIQHWVEGDRYIARAR
Ga0209415_102528162	3300027905	Peatlands Soil	VVSLDGSLFTINTSGGGKIPLIAHSASNFTMEGTGVDFVRDAKGAVTAMIQHWVEGDRYIARTK
Ga0209006_111632891	3300027908	Forest Soil	YGSTAEIVVSFEDSRFTINTNGGGKIPLIAHSETNFTMEGTGVDFVKDEKGAVTGMIQHWVEGDRVFARKK
Ga0137415_113202502	3300028536	Vadose Zone Soil	AEVLAQYVGTYQNPDPFVGVPEVITFEGGRLMINPGAGKIPLIARSESSFTMEGTGVDFVKDAKGAVTTMIQHWTEMDRYFARKK
Ga0307284_102639531	3300028799	Soil	ALAQYVGTYETSTLAGVGIVISLDGGHLMFDPGSGKIPLVAHSNNSFTMEGTGVEFVKDAKGTVTMIQHWTEGDRYATRKR
Ga0222749_102457351	3300029636	Soil	HLVGKSGEEFRVPAEVLAQYAGTYATFAVSLEGNRLMIDPGGAGKIPLIARSENGFTMEGTGVDFVKDAKGAVTTMVQHWTEMDRYFARKK
Ga0222749_107080642	3300029636	Soil	AQYAGAYQGATVSLEGNRLMVALGAAGKIPLIARSENTFTMEGTFVEFVKDAKGSVTRMVQSWVEGDRNYARVK
Ga0302179_101971641	3300030058	Palsa	EVLGQYVGKYASPASPAGIAVSLDGGRLMIDTGAGNVALIAHSETSFTMEGTGVEFVKDAKGVVTGLVQHWVEGDRYFPVSRPVTPGSHR
Ga0311372_105249001	3300030520	Palsa	SPASPAGIAVSLDGGRLMIDTGAGNVALIAHSETSFTMEGTGVEFVKDAKGVVTGLVQHWVEGDRYFPVSRPVTPGSHR
Ga0316363_104018332	3300030659	Peatlands Soil	AFVMSADCAAASSLGGADIVVSLDGSLFTINTSGGGKIPLIAHSESNFTMEGTGVDFVRDAKGAVTAMIQHWVEGDRYIARAR
Ga0170834_1137338842	3300031057	Forest Soil	CDNERDAPHLVGKSGEEFRAPREVLAQYAGTYGSPANDIVVSLEGSSFTINTGGGGKIPLVAHAENSFTMEGTGVEFVKDQKGAVTAMIQHWVEGDRYFARQK
Ga0302325_125290112	3300031234	Palsa	APHLVGKSGEEFRVPAEVLAQYAGKYGSPGLPPDIVVSQDASGFTINTGGAGKIPLIAHSETSFTMEGTGVDFVRDAKGAVIAMLQHWVEGDRYIARAK
Ga0302324_1011551532	3300031236	Palsa	AYESAALPAGIVVSLEGGRLMIDPGYGNIPLVAHSETSFTMEGTGVEFVRDAKGAVTGMVQHWTEADRFFPRKK
Ga0170818_1131841492	3300031474	Forest Soil	VSLEGSRLMIDSGGAGKIPLIARSESGFTMEGTGVDFVKDAKGAVTAMIQHWTEGDRYYARSK
Ga0265313_102090481	3300031595	Rhizosphere	VCENERDARHLVGKMGEESHVPDGLLAQYAGKYGPGDVVISLEGGRFAIETNGGGKIPLLAHGENNFTMEGTGVEFVKDGKGEVVAMVEHWVEGDRYFPRKR
Ga0307476_110392702	3300031715	Hardwood Forest Soil	KSEEEFHVAAEVLAQYAGTYQNGDPFVGVPEVITFEGGRLMINPGAGKIPLIARSENTFTMEGTGVEFVKDAKGAVTTMVQHWTEMDRYFARKK
Ga0307474_109228142	3300031718	Hardwood Forest Soil	LGEEFRVPAEVLGQYAGAYGTPASPADIVVSFEAGRFTIETGKAGKIPLIAHSETNFTMEGTGVDFVKDSKGAVTAMIQHWVEGDRYFARRK
Ga0307469_119947231	3300031720	Hardwood Forest Soil	AEVLAKYIGTYQSSVFPTAVVSLDGSRLMVDSGGTGKIPLITRSESSFTMEGTGVDFVKDAKGAVTAMIQHWTEGDRYFARAHP
Ga0307469_125347812	3300031720	Hardwood Forest Soil	VGTYETPRFPAGEVVFLEGNRLMINPDGVGKIPLIAHSETNFTMEGTGVDFVKDAKGAVTAMIQHWAEGDRYQARRK
Ga0318548_106052402	3300031793	Soil	YIGTYETPLVPTGVVVSLEESRLMIDTGEGKVPLFAHSENSFTMEGTGVEFVKDAQGAVVGMTQHWTEGDRYFPRRK
Ga0306921_105145671	3300031912	Soil	PAFPAGVVVSMERSRLMIDPGAGKIPLVAHSETSFTMEGTGVDFVKDAKGKVTSMIQHWTEGDRNYARKK
Ga0306926_104636613	3300031954	Soil	VPEGTPVTLERGRLMIDPGGAGKIPLVAHSENSFTMEGTGVEFVKDSSGAITAMIQHWTEGDRYQRRLK
Ga0306926_122935652	3300031954	Soil	GVVVSMERSRLMIDPGAGKIPLVAHSETSFTMEGTGVDFVKDAKGKVTSMIQHWTEGDRNYARKK
Ga0307479_114068781	3300031962	Hardwood Forest Soil	AEVLAQYAGTYGTPELPVVVSLEGNRLMIDSGGAGNIPLVAHAENSFTMEGTGVDFAKDAKGAVTEMIQHWSEGDRYFPRRK
Ga0318575_102542121	3300032055	Soil	PLVPRGVVVSLEESRLMIDTGEGKVPLFAHSENSFTMEGTGVEFVKDAQGAVVGMTQHWTEGDRYFPRRK
Ga0306924_115669651	3300032076	Soil	EGTPVTLERGRLMIDPGGAGKIPLVAHSENSFTMEGTGVEFVKDSSGAITAMIQHWTEGDRYQRRLK
Ga0306924_120231922	3300032076	Soil	VLAKYIGTYETPLVPTGVVVSLEEGRLMIDTGEGKVPLFAHSENSFTMEGTGVEFVKDAQGAVVGMTQHWTEGDRYFPRRK
Ga0311301_1002693313	3300032160	Peatlands Soil	MSADCAAASSLGGADIVVSLDGSLFTINTSGGGKIPLIAHSESNFTMEGTGVDFVRDAKGAVTAMIQHWVEGDRYIARAR
Ga0306920_1020973811	3300032261	Soil	AKVLDQYVGTYGTPPFPAVVSLEGGRLMIDPGSGKIPLIAQSETNFTMEGTGVEFVKDSAGKVTGMIQHWNEGDRNFPRAR
Ga0348332_116107812	3300032515	Plant Litter	GTYGTTAPGEVVSLEGSRLTIDPGSGKIPLIAHSESGFTMEGTGVDFVKDAKGAVTAMIQHWTEGDRYYARRK
Ga0335082_106108711	3300032782	Soil	HLVGKSGDEFRVPPEILAQYSGTYDRQEIPERAVVSLEGNRLVVDSEGAGKIPLIGRSENSFTMEGTGVEFVKDAKGTITEMIEHWSEGDRHFPRRR
Ga0335078_102109911	3300032805	Soil	RDAPHLVGKSGEEFRVPPEVLAQYAGKYGSPAAPTDIVVSYEDGNFTINTGGAGKIPLIAHSETSFTMEGTGVDFVRDAKGTVIAMVQHWVEGDRYLPRSRR
Ga0335070_116706251	3300032829	Soil	APVVVSLEDGRLMLDAGGSGKIPLIARSESSFTMEGTGVDFEKDARGAVTAMNEHWTEGDRHYVRRK
Ga0326726_118969362	3300033433	Peat Soil	AGSYEMAGFPVATIFLEGSRLIIDTGNTKIPLVAHSESSFTMEGTGVDFVRDAKGGVSDMIQHWTEGDRDYARRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094264

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences