 |
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F094254 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 106 |
| Average Sequence Length | 87 residues |
| Representative Sequence | MTTFLQPDDAVDFAESGRRRGQDRVACFLHLRDLVYLHPEAASASTIAFVQTLEAAVIAEKTTREKRLADARERARQKA |
| Number of Associated Samples | 71 |
| Number of Associated Scaffolds | 106 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 100.00 % |
| % of genes near scaffold ends (potentially truncated) | 0.94 % |
| % of genes from short scaffolds (< 2000 bps) | 0.94 % |
| Associated GOLD sequencing projects | 61 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.54 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (98.113 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.792 % of family members) |
| Environment Ontology (ENVO) | Unclassified (38.679 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (68.868 % of family members) |
| ⦗Top⦘ |
| ⦗Top⦘ |
| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 64.49% β-sheet: 0.00% Coil/Unstructured: 35.51% | Feature Viewer |
|
|
|||||
| Powered by Feature Viewer | |||||
| Structure Viewer | |
|---|---|
|
| |
| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.54 |
| Powered by PDBe Molstar | |
| ⦗Top⦘ |
| Pfam ID | Name | % Frequency in 106 Family Scaffolds |
|---|---|---|
| PF13676 | TIR_2 | 3.77 |
| PF02796 | HTH_7 | 1.89 |
| PF01738 | DLH | 1.89 |
| PF00572 | Ribosomal_L13 | 0.94 |
| PF13817 | DDE_Tnp_IS66_C | 0.94 |
| PF13517 | FG-GAP_3 | 0.94 |
| PF13683 | rve_3 | 0.94 |
| PF00440 | TetR_N | 0.94 |
| PF01710 | HTH_Tnp_IS630 | 0.94 |
| PF13403 | Hint_2 | 0.94 |
| PF02518 | HATPase_c | 0.94 |
| PF05598 | DUF772 | 0.94 |
| PF02371 | Transposase_20 | 0.94 |
| PF07883 | Cupin_2 | 0.94 |
| PF00313 | CSD | 0.94 |
| PF13586 | DDE_Tnp_1_2 | 0.94 |
| PF13191 | AAA_16 | 0.94 |
| COG ID | Name | Functional Category | % Frequency in 106 Family Scaffolds |
|---|---|---|---|
| COG0102 | Ribosomal protein L13 | Translation, ribosomal structure and biogenesis [J] | 0.94 |
| COG3415 | CRISPR-associated protein Csa3, CARF domain | Defense mechanisms [V] | 0.94 |
| COG3547 | Transposase | Mobilome: prophages, transposons [X] | 0.94 |
| ⦗Top⦘ |
| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 98.11 % |
| All Organisms | root | All Organisms | 1.89 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300001546|JGI12659J15293_10002614 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 5512 | Open in IMG/M |
| 3300002245|JGIcombinedJ26739_101090421 | Not Available | 685 | Open in IMG/M |
| 3300027895|Ga0209624_10002976 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 12285 | Open in IMG/M |
| ⦗Top⦘ |
| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 36.79% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 14.15% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 10.38% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 8.49% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 6.60% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 5.66% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 5.66% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 4.72% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 1.89% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 1.89% |
| Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 0.94% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 0.94% |
| Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil | 0.94% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.94% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2170459023 | Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition) | Environmental | Open in IMG/M |
| 3300001471 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 | Environmental | Open in IMG/M |
| 3300001546 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 | Environmental | Open in IMG/M |
| 3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
| 3300003505 | Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924) | Environmental | Open in IMG/M |
| 3300004092 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
| 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Environmental | Open in IMG/M |
| 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
| 3300005602 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 | Environmental | Open in IMG/M |
| 3300005610 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 | Environmental | Open in IMG/M |
| 3300005712 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 | Environmental | Open in IMG/M |
| 3300006057 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012 | Environmental | Open in IMG/M |
| 3300006086 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 | Environmental | Open in IMG/M |
| 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
| 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
| 3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
| 3300010379 | Sb_50d combined assembly | Environmental | Open in IMG/M |
| 3300012924 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300016270 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 | Environmental | Open in IMG/M |
| 3300016294 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 | Environmental | Open in IMG/M |
| 3300016341 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 | Environmental | Open in IMG/M |
| 3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
| 3300016387 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 | Environmental | Open in IMG/M |
| 3300016422 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 | Environmental | Open in IMG/M |
| 3300016445 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 | Environmental | Open in IMG/M |
| 3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
| 3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
| 3300020582 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O | Environmental | Open in IMG/M |
| 3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
| 3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
| 3300021170 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M | Environmental | Open in IMG/M |
| 3300021171 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M | Environmental | Open in IMG/M |
| 3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
| 3300021181 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O | Environmental | Open in IMG/M |
| 3300021401 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O | Environmental | Open in IMG/M |
| 3300021403 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O | Environmental | Open in IMG/M |
| 3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
| 3300021407 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O | Environmental | Open in IMG/M |
| 3300021432 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M | Environmental | Open in IMG/M |
| 3300021474 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O | Environmental | Open in IMG/M |
| 3300021475 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O | Environmental | Open in IMG/M |
| 3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
| 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027109 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes) | Environmental | Open in IMG/M |
| 3300027619 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027884 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027895 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027908 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes) | Environmental | Open in IMG/M |
| 3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
| 3300030763 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030815 | Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030862 | Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031474 | Fir Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031640 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23 | Environmental | Open in IMG/M |
| 3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
| 3300031715 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05 | Environmental | Open in IMG/M |
| 3300031718 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 | Environmental | Open in IMG/M |
| 3300031754 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 | Environmental | Open in IMG/M |
| 3300031799 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21 | Environmental | Open in IMG/M |
| 3300031823 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 | Environmental | Open in IMG/M |
| 3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
| 3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
| 3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
| 3300032009 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19 | Environmental | Open in IMG/M |
| 3300032059 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27 | Environmental | Open in IMG/M |
| 3300032160 | Sb_50d combined assembly (MetaSPAdes) | Environmental | Open in IMG/M |
| 3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
| 3300033134 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| FA3_01861210 | 2170459023 | Grass Soil | MTTFLGPDDAANVDLAESRQKRDQGRVACFLHLRDLVYLHREAASASAVAFVQKLEAAVIAEKTARERRLAEAR |
| JGI12712J15308_101162811 | 3300001471 | Forest Soil | MTTFLQPDEAGIESGTKRGQNKRGQNRAACFLHLRDLVYLHPKAASADAIAFVQSLEAAVIAEKVTREKQLAEARERAERAEGRREAD |
| JGI12659J15293_100021742 | 3300001546 | Forest Soil | MTRFLPSEEAVDLAESGRKRGQDRVACFLHLRDLVYLHPEMASASSISHVKTIEAAVIAEKAAREKQLAAMRERAERRREAERQKAATEQAKAG* |
| JGI12659J15293_100026142 | 3300001546 | Forest Soil | MTIFLGTDETGHVDLAESRHTRDKDRVACFLHLRDLVYMHTQAASATAIAFVQTLEAAVIAHKAARDRRLAEARARDAGRRQQEANRQKAAPDVPDDTTEDDPWGH* |
| JGI12659J15293_100088331 | 3300001546 | Forest Soil | MTTFLQPDEAGIESGTKRGQNKRGQNRAACFLHLGDLVYLHPKAASADAIAFVQSLEAAVIAEKATREKQLAEARERGERAEGRRE |
| JGIcombinedJ26739_1003075483 | 3300002245 | Forest Soil | MTRFLQPDEAAIDAVAESRTKRGRDRVACFLHLRDLVYLHPKAASTNAIAFVQSLEAAVIAQKGTREKRLAEARARAEGWLEAAR* |
| JGIcombinedJ26739_1010904211 | 3300002245 | Forest Soil | MTTFLGPDEATNVDLADSRHKRDQDRVACFLHLRDLVYLHPAAASASAVSFVQTLEAKVIAEKAAREKRLAEARAREASRRYEADRQ |
| JGIcombinedJ51221_102306541 | 3300003505 | Forest Soil | MTRFLQPDEAAIDAAAESRTKRGRDRVACFLHLRDLVYLHPKAASTXAIAFVQSLEAAVIAQKGTREKRLAXARATS* |
| Ga0062389_1025526711 | 3300004092 | Bog Forest Soil | MTTFLGPDEATNVDLADSRHRRDQDRVACFLHLRDLVYLHPEAASASAVSFVQTLEAKVIAEKAAREKRLAEVRAREASRRSTVRGGSTESGGRASEGGARED* |
| Ga0070710_113272562 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTFFDPDEATDVDFAETKRGQSRLACFLHLRDLCYLHPEAAPAGAIAHVIRLEAAVVAEKVAREKRLANVRERARQKAAVEQAKAESQLRK* |
| Ga0070711_1005344731 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTFLQPDDAVDFAESGRRRGQDRVACFLHLRDLVYLHPEAASASTIAFVQTLEAAVIAEKTTREKRLADARERARQKA |
| Ga0070711_1007581502 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTVLQPDEAGIESRTKRGQNKRAQNRAACFLHLRDLVYLHPKAASADAIAFVQSLEAAVIAEKAAREKRLVEARGRADAHG* |
| Ga0070762_101816884 | 3300005602 | Soil | MTRFLQPDEAAIDAAAESRTKRGRDRVACFLHLRDLVYLHPKAASTNAIAFVQSLEAAVIAQKGTREKRLAEARATS* |
| Ga0070763_103884461 | 3300005610 | Soil | MTTILQLDEAGNVDFAEPRQKRDRDRVACFLHLRDLVYLHREAASANTIAFVRMLEAAVIAEKTARDKRLADVRERARREADRQKEA* |
| Ga0070764_110979781 | 3300005712 | Soil | MTTILQLDEAGNVDFAEPRQKRGRDRVACFLHLRDLVYLHREAASANTIAFVRTLEAAVIAEKAAREKRLADARERARREADRQKEA* |
| Ga0075026_1008801491 | 3300006057 | Watersheds | MTTFLQTDEAGIESGTKRGQNKRGQNRAACFLHLRDLVYLHPKAASADAIAFVQSLEAAVIAEKATREKQLAEARERAERAE |
| Ga0075019_106559892 | 3300006086 | Watersheds | MTTFLQPDEAGIESRTKRGQNKRGQNRAACFLHLRDLVYLHPKAASADAIAFVQSLEAAVIAEKATREKQLAEARKREAERRQEADLQ |
| Ga0070716_1017834562 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | DFAETKRGQSRLACFLHLRDLCYLHPEAAPAGAIAQVIRLEAAVVAEKVAREKRLANVRERARQKAAVEQAKAESQLRK* |
| Ga0070712_1009269132 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTFLQPDDAVDFAESGRRRGQDRVACFLHLRDLVYLHPEAASASTIAFVQTLEAAVTAEKAAREKRLAAGRERAERRREADL* |
| Ga0070765_1002179002 | 3300006176 | Soil | MTRFPPSGEAVDFAESGRKRGQDRVACFLHLRDLIYLHPEAASASAVSFVQTFEAKVIAEKAAREKRLADVRERARW* |
| Ga0136449_1000245723 | 3300010379 | Peatlands Soil | MTRFLQPDVAAIDAAAESRTKRGRDRVACFLHLRDLVYLHPKAASTDAIAFVQSLEAAVIAQKGTREKRLAEARARTEGWLEAAR* |
| Ga0137413_109810502 | 3300012924 | Vadose Zone Soil | MTTFLQPDEATNVDFAEPRQKRDRDRVTCFLHLRDLVYLHPEAALASAVAFVQKLEAAVIAEKAARERRPAEARKRQAEQ |
| Ga0182036_107746421 | 3300016270 | Soil | MTTFLQPDEGINVDFAESRQKRDRDRVACFLHLRDLVYLHREAASVSTITFVQTLEAAVIAEKAAREKRLAAARERDAERRREADRQKAAAERAKVEKEDRASDGG |
| Ga0182041_117294152 | 3300016294 | Soil | MTTFLQPDEGINVDFAESRQKRDRDRVACFLHLRDLVYLHREAASVSTITFVQTLEAAVIAEKAARERRLAAARERDAERRREADRQKAAAERAETSLGGQK |
| Ga0182035_110679191 | 3300016341 | Soil | MSLQPDDDTDNVDFVESRHKRDPRVACFLHLRDLVYLHPEAASANAVAFVQTLEAKVIAEKAAREKR |
| Ga0182034_106500032 | 3300016371 | Soil | MTTFLQPDEGINVDFAESRQKRDRDRVACFLHLRDLVYLHREAASVSTITFVQTLEAAVIAEKAAREKRLAAARERGAERRREAVRKKAAPARAETEKEKT |
| Ga0182040_113672431 | 3300016387 | Soil | MTTFLQPDEGINVDFAESRQKRDRDRVACFLHLRDLVYLHREAASVSTITFVQTLEAAVIAEKAAREKRLAAARERDATRRREADRQKAAAERAKIEKEDRASDGG |
| Ga0182039_120417152 | 3300016422 | Soil | MTTFLQPDEGINADFAESRQKDRDRVACFLHLRDLVYMHRDAASVSTVAFVQTLEAAVIAEKAAREKRLAAVRKRDAERRREADRQKAAAERAETSLGGQK |
| Ga0182038_105311071 | 3300016445 | Soil | MSLQPDDDTDNVDFVESRHKRDPRVACFLHLRDLVYLHPEAASASAVAFVQTLEAKVIAEKAAREKRLAEARNREAERQKAAAERVTPLHVPVPRGTL |
| Ga0182038_106637012 | 3300016445 | Soil | MTTFLQPDEGINVDFAESRQKRDRDRVACFLHLRDLVYLHREAASVSTITFVQTLEAAVIAEKAAREKRLAAARERDAERRREADRQKAAAECAETSVGGQK |
| Ga0210407_100041066 | 3300020579 | Soil | MTTFLQPDEATNVDFAEPRQKRDRDRVACFLHLRDLVYLHPKAASADAIAFVQQLEAAVIAEKAAREKRLAEVCKREAERRQEADRQKAAVERAKAESQLRE |
| Ga0210407_106368431 | 3300020579 | Soil | MTTFLQPDEAGIESGTKRGQNKRGQNRAACFLHLRDLVYLHPKAASADAIAFVQSLEAAVIAEKATREKQLAEARERAERAE |
| Ga0210403_104010461 | 3300020580 | Soil | MTRFLPSEEAVDLAESGRKRGQDRVACFLHLRDLVYLHPEMASASSISHVKTIEAAVIAEKAAREKQ |
| Ga0210395_102165154 | 3300020582 | Soil | MTRFPPSGEAVDFAESGRKRGQDRVACFLHLRDLIYLHPEAASASAVSFVQTFEAKVIAEKAAREKRLADVRERARW |
| Ga0210395_102698552 | 3300020582 | Soil | RMTTILQLDEAGNVDFAEPRQKRDRDRVACFLHLRDLVYLHRKAASASTIAFVQTLEAAVIAEKAAREKRLADARERARREADRQKGA |
| Ga0210395_103663112 | 3300020582 | Soil | MTRFLQPDEAAIDAAAESRTKRGRDRVACFLHLRDLVYLHPKAASTNAIAFVQSLEAAVIAQKGTREKRLAEARATS |
| Ga0210395_106588872 | 3300020582 | Soil | SIRAAGRIMTTPFDPDEAIEVDFTKSRTKRDRDRIACFLHLRDLVYLHPEAASADAIALVQTLEAKVIAEKAAREKRLAEGRERKAAWREVDRVKH |
| Ga0210401_102390124 | 3300020583 | Soil | MTRFLQPDEAAIDAAAESRTKRGRDRVACFLHLRDLVYLHPKAASTDAIAFVQSLEAAVIAQKGTREKRLAEARATS |
| Ga0210401_102921722 | 3300020583 | Soil | MTTILQLDEAGNVDFAEPRQKRDRDRVACFLHLRDLVYLHREAASANTIAFVRTLEAAVIAEKAAREKRLADARERARREADRQKEA |
| Ga0210406_103787872 | 3300021168 | Soil | MTTFLQPDDTGIESRQKLDQDRVACFLHLRDLVYLHPQAAPAAAISHVKTLEAAVIAQKAAREKRLAEVRKREAERRQEADRQKAAAEQPP |
| Ga0210406_106970162 | 3300021168 | Soil | MTRFPPSGEAVDFAESGRKRGQDRVACFLHLRDLIYLHPEAASASAVSFVQTFEAKVIAEKAAREKRLADVRERARQKAAAEQAKADDGDGKLRRPAGAAREQGCIP |
| Ga0210400_103375073 | 3300021170 | Soil | MTTFLDPDDATNVDFAESRQNRGQDRVACFLHLRDLVYLHPEMASASSISHVKTIEAAVIAEK |
| Ga0210400_114493401 | 3300021170 | Soil | MTTILQLDEAGNVDFAEPRQKRDRDRVACFLHLRDLVYLHREAASANTIAFVRTLEAAVIAEKAAREKRLADVRE |
| Ga0210405_101144661 | 3300021171 | Soil | MTTILQLDEAGNVDFAEPRQKRDRDRVACFLHLRDLVYLHREVASANTIAFVRMLEAAVIAEKTAREKRLADARERARREADRQKEA |
| Ga0210405_101790183 | 3300021171 | Soil | MRAAGQMTTFLQPDEATNVDFAEPRQKRDRDRVACFLHLRDLVYLHPKAASADAIAFVQQLEAAVIAEKAAREKRLAEVCKREAERRQEADRQKAAVERAKAESQLRE |
| Ga0210405_102243183 | 3300021171 | Soil | MTTFLQPDEAGIESRTKRGQNKRGQNRAACFLHLRDLVYLHPKAASADAIVFVQSLEAAVIAEKATREKQLAEARERTERAEGRRE |
| Ga0210405_107073172 | 3300021171 | Soil | MTTSFDPDEAIEVDFTKSRTKRDRDRIACFLHLRDLVYLHPEAASADAIALVQTLEAKVIAEKAAREKRLAEGRERKAAWREVDRVKH |
| Ga0210405_110990892 | 3300021171 | Soil | TRFPPSGEAVDFAESGRKRGQDRVACFLHLRDLIYLHPEAASASAVSFVQTFEAKVIAEKAAREKRLADVRERARW |
| Ga0210396_113463551 | 3300021180 | Soil | MTTPFDPDEAIEVDFTKSRTKRDRDRIACFLHLRDLVYLHPEAASADAIALVQTLEAKVIAEKAAREKRLAEGRERKAAWREVDRVKH |
| Ga0210388_109252462 | 3300021181 | Soil | MTTILGTDETGNVDLAESGRKRSQDRVACFLHLRDLVYLHPGAASASAVVFVQTLEAKVIAEKTTRDVELCGKLGDGVRKAA |
| Ga0210393_100434393 | 3300021401 | Soil | MTTILQLDEAGNVDFAEPRQKRDRDRVACFLHLRDLVYLHRKAASASTIAFVQTLEAAVIAEKAAREKRLADARERARREADRQKGA |
| Ga0210393_102911562 | 3300021401 | Soil | MTTFLQPDEAGIDVDFAESRTKRGRDRVACFLHLRDLVYLHPKAASADAIAFVQSLEAAVIAQKGTREKRLAEARATS |
| Ga0210393_107725471 | 3300021401 | Soil | MTTILGTDETGNVDLAESGRKRSQDRVACFLHLRDLVYLHPGAASASAVVFVQTLEAKVIAEKATREKRLADARERARREADRQKAAAEQARAESQLRE |
| Ga0210397_106427941 | 3300021403 | Soil | MTTFLGPAEATNVDFAEPRHKRNQAHVACFLHLRDLVYLHPEAASASVVSFVQMFEAKVIAEKAAREKRLAEVRAREASRREADRQ |
| Ga0210397_106674533 | 3300021403 | Soil | GEAVDFAESGRKRGQDRVACFLHLRDLIYLHPEAASASAVSFVQTFEAKVIAEKAAREKRLADVRERARW |
| Ga0210387_105336062 | 3300021405 | Soil | MTTFLQPDEAGIESGTKRGQNKRGQNRAACFLHLRDLVYLHPKAASADAIAFVQSLEAAVIAEKATREKQLAEARERTERAEGRREADRVKAAAE |
| Ga0210387_109895491 | 3300021405 | Soil | MTTFLGPDEATNVDFAEPRHKRNQAHVACFLHLRDLVYLHPEAAPASVVSFVQMFEAKVIAEKAAREKRLAEVRAREASRREADRQKATVEQ |
| Ga0210387_114731532 | 3300021405 | Soil | MTTILWPDETGNVDFAESRHKRDQDRVACFLHLRDLVYLHPEGASASAIAFVQKLEAAVIAEKAAREKRLAEARERDERRREADRQKAAEQAK |
| Ga0210387_117132441 | 3300021405 | Soil | MTTFLGPDEATNVDLADSRHKRDQDRVACFLHLRDLVYLHPAAASASAVSFVQTLEAKVIAEKAAREKRLAE |
| Ga0210383_116634142 | 3300021407 | Soil | MMSFQESDEAVNVDESRNQRARARVACFLHLRDLVYLHPEAASASAVSVVRTLEAQVIAEKAAREKGRADARAKGVRFG |
| Ga0210383_116910831 | 3300021407 | Soil | YMTRFLQPDEAAIDAAAESRTKRGRDRVACFLHLRDLVYLHPKAASTNAIAFVQSLEAAVIAQKGTREKRLAEARATS |
| Ga0210384_115396732 | 3300021432 | Soil | MTTFLQPDEAGIESGTKRGQNKRGQNRAACFLHLRDLVYLHPKAASADAIAFVQSLEAAVIAEKATREKQLAEARERTERAEGRREADRV |
| Ga0210390_103631911 | 3300021474 | Soil | MTTSFDPDEAIEVDFTKSRTKRDRDRIACFLHLRDLVYLHLEAASADAIALVQTLEAKVIAEKAAREKRLAEGRERKAAWREVDRVKH |
| Ga0210392_103816691 | 3300021475 | Soil | QLDEAGNVDFAEPRQKRDRDRVACFLHLRDLVYLHREVASANTIAFVRMLEAAVIAEKTAREKRLADARERARREADRQKEA |
| Ga0210410_101838244 | 3300021479 | Soil | DEAGNVDFAEPRQKRDRDRVACFLHLRDLVYLHRKAASASTIAFVQTLEAAVIAEKAAREKRLADARERARREADRQKGA |
| Ga0207693_102207172 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRLTPGVKTLSYLARARDRARQGGQMTTFLQPDDAVDFAESGRRRGQDRVACFLHLRDLVYLHPEAASASTIAFVQTLEAAVTAEKAAREKRLAAGRERAERRREADL |
| Ga0207693_107045602 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTFLWPDDAINVDVAEFRQKREKDRVACFLHLRDLVYLHPKAASADAIALVQSLEAAVIAEKAAREKRLVEARGRADAHA |
| Ga0207663_102473272 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTFLQPDDAVDFAESGRRRGQDRVACFLHLRDLVYLHPEAASASTIAFVQTLEAAMIAEKAACEKRLAAGRERAERRREADLQKSGGRASKGG |
| Ga0207663_107493711 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTFVQPDEATNVDFAESRQRDQDRVACFLHLRDLVYMHTQGASATAIAFVKKLESAVLAEKAAREKRLAEAREREAER |
| Ga0208603_10664281 | 3300027109 | Forest Soil | MTTFLQPDEAGIESGTKRGQNKRGQNRAACFLHLRDLVYLHPKAASADAIAFVQSLEAAVIAEKATREKQLAEARERA |
| Ga0209330_11207801 | 3300027619 | Forest Soil | MTRFLQPDEAAIDAAAESRTKRGRDRVACFLHLRDLVYLHPGAASASAVAFVQTLEAKVIAEKTTREKRLADMRERAERQK |
| Ga0209275_105771432 | 3300027884 | Soil | MTRFLEPDEAAIDAAAESRTKRGRDRVACFLHLRDLVYLHPKAASTNAIAFVQSLEAAVIAQKGTREKRLAEARATS |
| Ga0209624_100029765 | 3300027895 | Forest Soil | MTIFLGTDETGHVDLAESRHTRDKDRVACFLHLRDLVYMHTQAASATAIAFVQTLEAAVIAHKAARDRRLAEARARDAGRRQQEANRQKAAPDVPDDTTEDDPWGH |
| Ga0209624_100092152 | 3300027895 | Forest Soil | MTRFLPSEEAVDLAESGRKRGQDRVACFLHLRDLVYLHPEMASASSISHVKTIEAAVIAEKAAREKQLAAMRERAERRREAERQKAATEQAKAG |
| Ga0209006_104599202 | 3300027908 | Forest Soil | MTRFLPSDEAVDFAESGRKRGQDRVACFLHLRDLVYLHPEAASASAVSFVQTLEAKVIAEKAAREKRLA |
| Ga0209006_108341791 | 3300027908 | Forest Soil | YWREGHEKRAPQGGRMTTILQLDEAGNVDFAEPRQKRDRDRVACFLHLRDLVYLHRKAASASTIAFVQTLEAAVIAEKAAREKRLADARERARREADRQKGA |
| Ga0209006_108608241 | 3300027908 | Forest Soil | MTRFLPSEQAVDFAESERKRGQDRVACFLHLRDLCYLHPEAAPAVAIAHMKTLEATVIAKKATREKQLADWR |
| Ga0209006_112367031 | 3300027908 | Forest Soil | MTTFLGPDEATNVDFAEPRHKRNQAHVACFLHLRDLVYLHPEAASASVVSFVQMFEAKVIAEKAAREKRLAEVRAREASRREGDRQKATVEQATAGNGDGYRT |
| Ga0308309_117615041 | 3300028906 | Soil | MTTFLQPDEAGIESGTKRGQNKRGQNRAACFLHLRDLVYLHPKAASADAIAFVQSLEAAVIAEKVTREKQLAEARERAERAEGRR |
| Ga0265763_10127611 | 3300030763 | Soil | MTTILGTDETGNVDLAESGRKRSQDRVACFPHLRDLVYLHPGAASASAVAFVQTLEAKVIAEKTTREKRLADMRERAERQNAADRQKAAAETREGGELA |
| Ga0265746_10312392 | 3300030815 | Soil | MTTILGTDETGNVDLAESGRKRSQDRVACFPHLRDLVYLHPGAASASAVAFVQTLEAKVIAEK |
| Ga0265753_10474631 | 3300030862 | Soil | MTTILGTDETGNVDLAESGRKRSQDRVACFLHLRDLVYLHPGAASASAVVFVQTLEAKVIAEKATREKRLADARERARREADRQKAAAEQAKAESQLTG |
| Ga0265753_11254781 | 3300030862 | Soil | MTTFLQPDEAGIESGTRRGQNKRGQNRAACFLHLRDLVYLHPKAASADAIAFVQSLEAAVIAEKATREKQLAEARERAEGPREADRVKAAAEK |
| Ga0265760_103070882 | 3300031090 | Soil | MTTILGTDETGNVDLAESGRKRSQDRVACFLHLRDLVYLHPGAASASAVVFVQTLEAKVIAEKATREKRLADARERARREADRQKAAAEQAKAESQL |
| Ga0170824_1059764071 | 3300031231 | Forest Soil | MTTFLQPDEAGIESGTKRGQNKRGQNRAACFLHLRDLVYLHPKAASADAIAFVQSLEAAVIAEKATREKQLAEARERTER |
| Ga0170824_1073836771 | 3300031231 | Forest Soil | MTTFLGPDDAANVDLAESRQKRDQGRVACFLHLRDLVYLHREAASASAVAFVQKLEAAVIAEKTARERRLAEARKREADRQ |
| Ga0170824_1080054501 | 3300031231 | Forest Soil | MTTILGTDETGNVDLAESGRKRSQDRVACFLHLRDLVYLHPGAASASAVVFVQTLEAKVIAEKATREKRLADARERARREADRQKAAAEQAKAESQLRE |
| Ga0170824_1199460874 | 3300031231 | Forest Soil | MTTILWPDEATNVDFAESRRKRDQDRVACFLHLRDLVYMHREAASASIIAFVQTLEAAVIAQKAAREKRLADVREREASRRYEADRQKAAAEQAKAGNGDG |
| Ga0170818_1004420062 | 3300031474 | Forest Soil | MTRFPPSEEAVDFAESGRKRGQDRVACFLHLRDLVYLHPKAASTDAIAFVQSLEAAVIAQKGTREKRLAEARTG |
| Ga0318555_104598092 | 3300031640 | Soil | DDADNVDFVESRHKRDHRVSCFLHLRDLVYLHPEAASASAVAFVQTLEAKVISEKAAREKRLAEVRKREAERQKAAAERAKADDGDG |
| Ga0310686_1045932074 | 3300031708 | Soil | MTTILGTDETGNVDLAESGRKRSQDRVACFLHLRDLVYLNPGAASASAVVFVQTLEAKVIAEKATREKRLADARERARREADRQKAAAEQAKAESQLREQYL |
| Ga0310686_1071268142 | 3300031708 | Soil | MTRFLQPDEAGIDAAAESRTKRGRDRVACFLHLRDLVYLHPKAASTDAIAFVQSLEAAVIAQKGAREKRLAEARARAEGWL |
| Ga0307476_101053253 | 3300031715 | Hardwood Forest Soil | MTRFLQPDEAAIDAAAESRTKRGRDRVACFLHLRDLVYLHPKAASTDAIAFVQSLEAAVIAQKGTREKRLAEARARAEGWLEAAR |
| Ga0307474_101626621 | 3300031718 | Hardwood Forest Soil | MTTFLGPDEATNVDLAESRHTRDQGRVACFLHLRDLVYLHPEAASAGAVSHVKILEAEVIAKKAAREKRLADARERARQKAAAECAKTDAGDG |
| Ga0307475_103245211 | 3300031754 | Hardwood Forest Soil | MTTFLQPDEATNVDFAESRHTSDKDRVACFLHLRDLVYMHTQAASATAIAFVKKLEAAVLAQKAAREKRLGPVFS |
| Ga0318565_105625751 | 3300031799 | Soil | MTTFLQPDEGINVDFAESRQKRDRDRVACFLHLRDLVYLHREAASVSTITFVQTLEAAVIAEKAAREKRLAVARERDAERRREADRQKAAAERAKVEKE |
| Ga0307478_112441841 | 3300031823 | Hardwood Forest Soil | QGQMTTFLQPDEATNVDFAEPRQKRDRDRVACFLHLRDLVYLHPKAASADAIAFVQKLEAAVIAEKAAREKRLAEVRKREAERRQEADRQKAAVERAKAESQLRE |
| Ga0307478_116766101 | 3300031823 | Hardwood Forest Soil | MTRFLQPDEAAIDAAAESRTKRGRDRVACFLHLRDLVYLHPKAASTDAIAFVQSLEAAVIAQKGTREKRLVALHSDYDSLTGVG |
| Ga0306921_114009741 | 3300031912 | Soil | MTMFLQPDDDADNVDFVESRHKRDSRVACFLHLRDLVYLHPQAASASAVAFVQTLEAKVIAEKAAREKRLAEARKREAERQKAAAEPVTPLHVPVPFQSGGTL |
| Ga0307479_120494991 | 3300031962 | Hardwood Forest Soil | GGQMTTFLQPDDAVDFAESGRRRGQDRVACFLHLRDLVYLHPKAASADAIAFVQSLEAAVIAQKGTREKRLAEARARAEGWLEAAR |
| Ga0306922_117903411 | 3300032001 | Soil | MMTLEPDEAINVDFAEPRQKRDKDRVACFLHLRDLVYLHPEAASANAVAFVQTLEAKVIAEKAAREK |
| Ga0318563_102460021 | 3300032009 | Soil | MTMFLQPDDDADNVDFVESRHKRDSRVGCFLHLRDLVYLHPEAASASAVAFVQTLEAKVISEKAAREKRLAEVR |
| Ga0318533_107995202 | 3300032059 | Soil | MTMFLQPDDDADNVDFVESRPKRDSRVACFLHLRDLVYLHPQAASASAVAFVQTLEAKVIAEKAAREKRLAEARKREAERQKAAAEPVTPLHVPVPFQSGGTL |
| Ga0311301_100327453 | 3300032160 | Peatlands Soil | MTRFLQPDVAAIDAAAESRTKRGRDRVACFLHLRDLVYLHPKAASTDAIAFVQSLEAAVIAQKGTREKRLAEARARTEGWLEAAR |
| Ga0306920_1040542992 | 3300032261 | Soil | MTTFLAPDEAIDFADSRRKRGQDQRVACFLHLRDLVYLHPEAAPASAVSFVRTIEARVIAAKFARERKD |
| Ga0335073_100866064 | 3300033134 | Soil | MTTFLQPDEANNVDFAEHRQKRDRDRAACFLHLRDLVYLHPGAASASAIAFVQKLEVAVIAERAAREKRLAEARKREAERRARSGSTESGGQTGRRLG |
| ⦗Top⦘ |
|
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |