Metagenome / Metatranscriptome Family F094230

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094230
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	73 residues
Representative Sequence	MPAIAERLPAKYLIKDEAPKTISSRQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEGKHFTIEKA
Number of Associated Samples	96
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.06 %
% of genes near scaffold ends (potentially truncated)	89.62 %
% of genes from short scaffolds (< 2000 bps)	85.85 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.811 % of family members)
Environment Ontology (ENVO)	Unclassified (21.698 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.774 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.00% β-sheet: 0.00% Coil/Unstructured: 60.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF09907	HigB_toxin	72.64
PF12728	HTH_17	2.83
PF00924	MS_channel	1.89
PF07885	Ion_trans_2	1.89
PF16576	HlyD_D23	0.94
PF00817	IMS	0.94
PF13411	MerR_1	0.94
PF01841	Transglut_core	0.94
PF07228	SpoIIE	0.94
PF03683	UPF0175	0.94
PF02836	Glyco_hydro_2_C	0.94
PF07681	DoxX	0.94
PF01074	Glyco_hydro_38N	0.94
PF12844	HTH_19	0.94
PF01381	HTH_3	0.94
PF07992	Pyr_redox_2	0.94
PF04365	BrnT_toxin	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	1.89
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	1.89
COG0383	Alpha-mannosidase	Carbohydrate transport and metabolism [G]	0.94
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.94
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.94
COG2886	Predicted antitoxin, contains HTH domain	General function prediction only [R]	0.94
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.94
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	0.94
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	73.58 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.87 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.83 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.87 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.83 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.87 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.87 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.83 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.87 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.83 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005167\|Ga0066672_10414204	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300005179\|Ga0066684_10006940	All Organisms → cellular organisms → Bacteria	5210	Open in IMG/M
3300005332\|Ga0066388_103009010	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300005367\|Ga0070667_101052820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300005471\|Ga0070698_100016072	All Organisms → cellular organisms → Bacteria	7902	Open in IMG/M
3300005518\|Ga0070699_100266492	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300005536\|Ga0070697_100441603	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300005549\|Ga0070704_101125712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300005561\|Ga0066699_10528519	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300005598\|Ga0066706_10383714	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300005712\|Ga0070764_10402120	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300006050\|Ga0075028_100737488	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300006102\|Ga0075015_100360988	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300006174\|Ga0075014_100783822	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300006175\|Ga0070712_100117505	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300006755\|Ga0079222_10128639	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300006755\|Ga0079222_11119356	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300006797\|Ga0066659_11485844	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	567	Open in IMG/M
3300006797\|Ga0066659_11491752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	566	Open in IMG/M
3300006797\|Ga0066659_11721484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	529	Open in IMG/M
3300006800\|Ga0066660_11163626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	607	Open in IMG/M
3300006804\|Ga0079221_10618300	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M
3300006904\|Ga0075424_100513350	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300009012\|Ga0066710_102620342	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300009089\|Ga0099828_10396869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300009792\|Ga0126374_11081026	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300010301\|Ga0134070_10327391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300010321\|Ga0134067_10415782	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300010371\|Ga0134125_12225057	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300010937\|Ga0137776_1826089	All Organisms → cellular organisms → Bacteria → Acidobacteria	1212	Open in IMG/M
3300011270\|Ga0137391_11370237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300012198\|Ga0137364_10967820	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300012199\|Ga0137383_10316636	All Organisms → cellular organisms → Bacteria → Acidobacteria	1142	Open in IMG/M
3300012200\|Ga0137382_10119922	All Organisms → cellular organisms → Bacteria → Acidobacteria	1757	Open in IMG/M
3300012202\|Ga0137363_10428356	All Organisms → cellular organisms → Bacteria → Proteobacteria	1105	Open in IMG/M
3300012202\|Ga0137363_11117256	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M
3300012203\|Ga0137399_10202310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1612	Open in IMG/M
3300012211\|Ga0137377_10926690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300012361\|Ga0137360_11475429	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300012363\|Ga0137390_10381193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1390	Open in IMG/M
3300012391\|Ga0134035_1093580	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300012683\|Ga0137398_10526241	All Organisms → cellular organisms → Bacteria → Acidobacteria	814	Open in IMG/M
3300012685\|Ga0137397_10170509	All Organisms → cellular organisms → Bacteria	1616	Open in IMG/M
3300012685\|Ga0137397_10548225	All Organisms → cellular organisms → Bacteria → Acidobacteria	861	Open in IMG/M
3300012923\|Ga0137359_10723043	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300012923\|Ga0137359_11392172	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300012925\|Ga0137419_10619401	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300012944\|Ga0137410_10182808	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300012972\|Ga0134077_10341017	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300012975\|Ga0134110_10010647	All Organisms → cellular organisms → Bacteria	3492	Open in IMG/M
3300012977\|Ga0134087_10161240	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300015051\|Ga0137414_1197839	All Organisms → cellular organisms → Bacteria → Acidobacteria	3203	Open in IMG/M
3300015245\|Ga0137409_10033048	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5001	Open in IMG/M
3300015371\|Ga0132258_10049221	All Organisms → cellular organisms → Bacteria → Acidobacteria	9626	Open in IMG/M
3300016270\|Ga0182036_10962625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300016294\|Ga0182041_10625625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	948	Open in IMG/M
3300017656\|Ga0134112_10368073	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300017944\|Ga0187786_10567938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300017955\|Ga0187817_10128332	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300017975\|Ga0187782_10634616	All Organisms → cellular organisms → Bacteria → Acidobacteria	822	Open in IMG/M
3300017975\|Ga0187782_11017434	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300018086\|Ga0187769_10984833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300020021\|Ga0193726_1013314	All Organisms → cellular organisms → Bacteria	4350	Open in IMG/M
3300020581\|Ga0210399_11085076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300020581\|Ga0210399_11491692	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300020583\|Ga0210401_11350866	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300021171\|Ga0210405_11335722	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300021180\|Ga0210396_10024014	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5647	Open in IMG/M
3300021401\|Ga0210393_10541240	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300021407\|Ga0210383_11052589	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300021420\|Ga0210394_11751589	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300021433\|Ga0210391_10906901	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300021439\|Ga0213879_10244076	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300021474\|Ga0210390_10259427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1472	Open in IMG/M
3300021474\|Ga0210390_10636589	All Organisms → cellular organisms → Bacteria → Acidobacteria	892	Open in IMG/M
3300021477\|Ga0210398_10075643	All Organisms → cellular organisms → Bacteria → Acidobacteria	2736	Open in IMG/M
3300024181\|Ga0247693_1000053	All Organisms → cellular organisms → Bacteria → Acidobacteria	37016	Open in IMG/M
3300024182\|Ga0247669_1002330	All Organisms → cellular organisms → Bacteria → Acidobacteria	4829	Open in IMG/M
3300024283\|Ga0247670_1020861	All Organisms → cellular organisms → Bacteria → Acidobacteria	1173	Open in IMG/M
3300025915\|Ga0207693_10123009	All Organisms → cellular organisms → Bacteria → Acidobacteria	2038	Open in IMG/M
3300026277\|Ga0209350_1084157	All Organisms → cellular organisms → Bacteria → Acidobacteria	841	Open in IMG/M
3300026305\|Ga0209688_1053346	All Organisms → cellular organisms → Bacteria → Acidobacteria	758	Open in IMG/M
3300026374\|Ga0257146_1088312	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300026514\|Ga0257168_1089933	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300026542\|Ga0209805_1362369	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300026547\|Ga0209156_10011246	All Organisms → cellular organisms → Bacteria	5812	Open in IMG/M
3300026548\|Ga0209161_10018069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5127	Open in IMG/M
3300026890\|Ga0207781_1007495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1205	Open in IMG/M
3300026921\|Ga0207860_1031801	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300027692\|Ga0209530_1167627	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300027882\|Ga0209590_10426057	All Organisms → cellular organisms → Bacteria → Acidobacteria	857	Open in IMG/M
3300027894\|Ga0209068_10127473	All Organisms → cellular organisms → Bacteria → Acidobacteria	1362	Open in IMG/M
3300028146\|Ga0247682_1103789	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300030589\|Ga0210255_10936398	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300031057\|Ga0170834_100918679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1101	Open in IMG/M
3300031122\|Ga0170822_13460262	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300031128\|Ga0170823_16816109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1548	Open in IMG/M
3300031231\|Ga0170824_113528285	All Organisms → cellular organisms → Bacteria → Acidobacteria	1172	Open in IMG/M
3300031708\|Ga0310686_109637452	All Organisms → cellular organisms → Bacteria → Acidobacteria	5911	Open in IMG/M
3300031718\|Ga0307474_10380588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1096	Open in IMG/M
3300031823\|Ga0307478_11050455	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300031954\|Ga0306926_12427695	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300031962\|Ga0307479_10868277	All Organisms → cellular organisms → Bacteria → Acidobacteria	875	Open in IMG/M
3300031962\|Ga0307479_12184320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300032059\|Ga0318533_10343047	All Organisms → cellular organisms → Bacteria → Acidobacteria	1087	Open in IMG/M
3300033180\|Ga0307510_10417027	All Organisms → cellular organisms → Bacteria → Acidobacteria	785	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.23%
Host-Associated	Host-Associated	3.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.57%
Aquatic	Environmental → Aquatic	5.66%
Plants	Host-Associated → Plants	3.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.57%
Sediment	Environmental → Aquatic → Sediment	3.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.89%
Freshwater	Environmental → Aquatic → Freshwater	0.94%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.94%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.42%
Loam	Environmental → Terrestrial → Soil → Loam	10.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.77%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.94%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.94%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.66%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.77%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.94%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.94%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012391	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026890	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 51 (SPAdes)	Environmental	Open in IMG/M
3300026921	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 28 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300030589	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR019SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066672_104142041	3300005167	Soil	MPAIAERLPAKYLIKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEGKHFTIEKASAVEVLRELMDTN
Ga0066684_100069401	3300005179	Soil	MPAIAERLPAKYLIKDEAPKTISSRQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEG
Ga0066388_1030090101	3300005332	Tropical Forest Soil	VPAIAERLPAKYLVKAEGPKIIASREQHEAYIQRLLELQRKAHRSAEETETAKLLVVLIADYEAKQF
Ga0070667_1010528202	3300005367	Switchgrass Rhizosphere	MPAIAERLPAKYLVKAEAPKIIASREQHQAYVSRLMELQRKAPRTAEETETAKLLVVL
Ga0070698_10001607211	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPAIAERLPAKYLIKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEGK
Ga0070699_1002664921	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VPATAERLPAKYLVKEEAPKIISSPEQHQAYISRLLELQRKAHRSAEETETAKLLVVLIADYEAKHFVVEKASG
Ga0070697_1004416033	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPAIAERLPAKYLIKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEETETTKLLIVLIADYEG
Ga0070704_1011257122	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MPAIAERLPAKYLVKAEAPKIIASREQHQAYVSRLLELQRKAQRTAEETETAKLLVVLIADY
Ga0066699_105285191	3300005561	Soil	MPAIAERLPAKYLIKDEAPKTISSRQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEGKHFTIEKAS
Ga0066706_103837141	3300005598	Soil	MSAIAERLPAKYLIKDEVPKAISSPQQHEAYVSRLLELQRKAHRTVEETETAKLLIVLIADYEGKHFTIEKASAVEVLRELMDTN
Ga0070764_104021203	3300005712	Soil	MPAIAERLPAKYLVKAEAPKIIASREQHEAYIQRLLELQRKAHRSAEETETTKLLVVLIADYEAKQFTIEKASG
Ga0075028_1007374882	3300006050	Watersheds	VPAIAERLPAKYLVKAEAPKIIASREQHAAYVSRLLELQRKAHRSAQETETAKLLVVLIADYEAKQF
Ga0075015_1003609881	3300006102	Watersheds	MPAIAERLPAKYLVKAEAPKVIASREQHEAYIQRLLELQRKAHRSAEETETAKLLVVLIADYE
Ga0075014_1007838221	3300006174	Watersheds	MPAIAERLPAKYLVKAEAPKIIASREQHEAYIQRLLELQRKAHRSAEETETAKLLVVLIADYE
Ga0070712_1001175054	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPAIAERLPAKYLIKAEAPKIIASREQYEAYIQMLLKLQRKAYRSAEETETAKLLVVLIADFEAKQFTIEKVSGVEC*
Ga0079222_101286392	3300006755	Agricultural Soil	VPAIAERLPAKYLVKVEAPKIIASREQHEAYIQRLLELQRKANQSAEETETANLLVVLIADYEAKQFTIKSPQE*
Ga0079222_111193561	3300006755	Agricultural Soil	MPAIAERLPAKYLIKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEAKHFTVEKA
Ga0066659_114858441	3300006797	Soil	MSAIAERLPAKYLIKDEVPKAISSPQQHEAYVSRLLELQRKAHRTVEETETAKLLIVLIADYEGKHFTIEKASAVEVLRELMDTNG
Ga0066659_114917521	3300006797	Soil	MSAIAERLPAKYLIKDEVPKAISSPQQHEAYVSRLLELQRKAHRTAEETETAKLLIVLIADYEGKHFTIEKA
Ga0066659_117214841	3300006797	Soil	MPAIAERLPAKYLIKDEAPKTISSRQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEGKHFTIEKA
Ga0066660_111636262	3300006800	Soil	MPAIAERLPAKYLIKDEAPKTISSRQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEGKHFTIEKASGVEVLKELM
Ga0079221_106183002	3300006804	Agricultural Soil	MPAIAERLPAKYLIKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIA
Ga0075424_1005133501	3300006904	Populus Rhizosphere	VPAIAERLSAKYLVKEEAPKTISTREQHEAYISRLVELQRKARRTTHETEAAKLLIVLIADYEGKHFTIEKASGVE
Ga0066710_1026203421	3300009012	Grasslands Soil	MPAIAERLPAKYLIKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEETETAKLLVVLIADYEAKH
Ga0099828_103968691	3300009089	Vadose Zone Soil	MPAIAERLPAKYLVKAEAPKIIASRAQHEAYVSRLLELERKAHRSAEETEAAKLLVVLIADYEAKQFTIEKDSGVEVLRELMDANGL
Ga0126374_110810262	3300009792	Tropical Forest Soil	VPAIAERLPAKYLVKAEGPKVIASREQHEAYIQRLLELQRKAHRSAEETETAKLLVVLIADYEAKQFTIEKASGVEVLRELMDA
Ga0134070_103273912	3300010301	Grasslands Soil	MPAIAERLPAKYLIKDEAPKTISSPQQHEAYISRLLELQRKARRTAEETETAKLLIVLIADYEAKHFTVEKASGVEVLKELMNTNGLR
Ga0134067_104157822	3300010321	Grasslands Soil	MPAIAERLPAKYLIKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEGKHFTIEK
Ga0134125_122250572	3300010371	Terrestrial Soil	VPATAERLPAKYLVKEEAPKTVSSSEQHQAYISRLLELQRKAHRSAEETETAKLLVVVIADYEA
Ga0137776_18260893	3300010937	Sediment	VPVIAERLPTKYLVKDEAPKIVSSPQQHQAYVSRLLDLQRKARRTAEETETAKLLVVLIADYE
Ga0137391_113702372	3300011270	Vadose Zone Soil	MPAIAERLPAKYLIKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEGKHFTIEKASGVEVLKELMDTNGLR
Ga0137364_109678202	3300012198	Vadose Zone Soil	MPAIAERLPAKYLIKDEAPKTISSPQQHEAYISRLLELQGKTHRTAEETETAKLLIVLIADYEGKHFTIEKVSGVEVLKELMDTN
Ga0137383_103166361	3300012199	Vadose Zone Soil	MPAIAERLPAKYLIKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEGKHFTIEKASGVE
Ga0137382_101199221	3300012200	Vadose Zone Soil	VPAIAERLPEKYLIKDEAPKTISSPQQHKAYISRLLELQRKAHRTAEETETAKLLIVL
Ga0137363_104283563	3300012202	Vadose Zone Soil	VPAIAERLPAKYLLKEEAPKIISSAQQHETYIQRLLELQRKAHRTAEETETAKLLIVLIADYE
Ga0137363_111172561	3300012202	Vadose Zone Soil	VPAIAERLPAKYLVKAEAPKIIASREQHEAYIQRLLELQRKAHRSAEETETAKLLVVLIADYEAKQF
Ga0137399_102023103	3300012203	Vadose Zone Soil	MPAIAERLPEKYLIKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYERKHFTIEKVSGVEVLKELMDTNGLR
Ga0137377_109266902	3300012211	Vadose Zone Soil	MPAIAERLPAKYLVKAEAPKIIASREQHEAYIQRHLELQRKANRSSEETEMAKLLVVLIADYEGKQFAIEKA*
Ga0137360_114754291	3300012361	Vadose Zone Soil	VPAIAERLPAKYLLKEEAPKIISSAQQHETYIQRLLELQRKAHRTAEETETAKLLIVLIADYEAKHFKIEKVSGVEVLKELM
Ga0137390_103811931	3300012363	Vadose Zone Soil	VPATAERLPAKYLVKEEAPKIISSPEQHEAYISRLLELQRKAHRSADEAETAKLLVVLIADYEAKHFVVEKASGIEVLRELMAANGL
Ga0134035_10935801	3300012391	Grasslands Soil	MPAIAERLPAKYLIKDEAPKTISSRQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEGKHLTIEKASGVE
Ga0137398_105262412	3300012683	Vadose Zone Soil	VPAIAERLPAKYLVKAEAPKIIASREQHEAYIQRLLELQRKAHRSAEETETAKLLVVLIADYEAKQFTIEKASGVEVLRELMD
Ga0137397_101705093	3300012685	Vadose Zone Soil	MPAIAERLPAKYLVKAEAPKIIASREQHEAYIQRLLELQRKAHRSAEETETAKLLVVLIGDYEAKQFTIEKSSGVEVLRELMDANGL
Ga0137397_105482251	3300012685	Vadose Zone Soil	MPAIAERLPEKYLIKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEGKHFTIEKASGV
Ga0137359_107230431	3300012923	Vadose Zone Soil	VPAIAERLPAKYLIKEEAPKTISSREQHEAYISRLLELQRKTHRTAEETETAKLLIVLIADYEAKH
Ga0137359_113921722	3300012923	Vadose Zone Soil	MPAIAERLPAKYLVKAEAPKIIASREQHEAYIQRLLELQRKAHRSAEEAETAKLLVVLIADYEAKQFTIEKASGVEVL
Ga0137419_106194012	3300012925	Vadose Zone Soil	MPAIAERLPAKCLFKAEAPKIIASREQREAYIQRLLELQRKANRGSEETETAKLLVVLIADYEGKQFAIEKASGLEVLRELSKSLLRSYVL*
Ga0137410_101828085	3300012944	Vadose Zone Soil	TTKEVGKMPAIAERLPAKYLVKAEAPKTVASREQHEAHIQRLLELQRKAHRSAEESETAKLLVVLIADYEAKRFTIEKAQE*
Ga0134077_103410173	3300012972	Grasslands Soil	MPAIAERLPAKYLIKDEAPKTISSSQQHEAYISRLLELQRKAHRTAEETETAKLLVVLIADYEA
Ga0134110_100106475	3300012975	Grasslands Soil	MPAIAERLPAKYLIKDEAPKTISSPRQHEAYISRLLELQRKAHRTAEETETAKLLIVL
Ga0134087_101612401	3300012977	Grasslands Soil	MPAIAERLPAKYLVKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEEMETAKLLVVLIADYEAKHFTI
Ga0137414_11978392	3300015051	Vadose Zone Soil	MPAIAERLPSKYLVKAEASEIIASREQHEAYIQRLWNCNAKAHRSAEETETAKLLVVLIADYETRQFHY*
Ga0137409_100330484	3300015245	Vadose Zone Soil	MPAIAERLPAKYLVKAEAPKTVASREQHEAHIQRLLELQRKAHRSAEESETAKLLVVLIADYEAKRFTIEKAQE*
Ga0132258_100492217	3300015371	Arabidopsis Rhizosphere	MPAIAERLPAKYLVKAEAPKIIASREQYEAYIQMLLKLQRKAYRSAEETETAKLLVVLIADFEAKQFTIEKVSGVEC*
Ga0182036_109626252	3300016270	Soil	MPAIAERLPAKYLVKAEAPKIIASREQHGAYIQRLLELQRKAHRSAEETETAKLLVVLIADDEAKQFTIEKPSGVEVLRELIAANGLRQ
Ga0182041_106256251	3300016294	Soil	MPAIAERLPAKYLIKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEGKHFIIEKASGVEVLKELMDTNG
Ga0134112_103680731	3300017656	Grasslands Soil	MPAIAERLPAKYLVKAEAPKIIASREQHEAYIQRLLELQRKGHRTVEETETAKLLVVLIADYEAKQFTIEKASGVEVLRELM
Ga0187786_105679381	3300017944	Tropical Peatland	VPVIAERLPAKYLVKDEAPKIVSSPQQHQAYISRLLDLQRKAHRTAEETETAKLLVVLIADYEAKHFIVERASGVEVLKELMDANGL
Ga0187817_101283321	3300017955	Freshwater Sediment	MPAIAERLPAKYLIKNEAPKTISSPQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEGKH
Ga0187782_106346163	3300017975	Tropical Peatland	VPATVERLPARYLVNEEAPKTIASRPQHEAYISRLLELQRKTRRSVEETETAKLLVVLIADYEAKQFRVQNAS
Ga0187782_110174342	3300017975	Tropical Peatland	VPATVERLPAKYLVKAEAPRTIASRAQHEAYLSRLLELQRKTHRSAEETETAKLLVVLIADYEARQFRVESAS
Ga0187769_109848331	3300018086	Tropical Peatland	VPATVERLPAKYLVKAEAPRTIASRAQHEAYLSRLLELQRKTHRRAGEMETARLLVVLIADYEAKQFRVQNASGIEVLKELM
Ga0193726_10133146	3300020021	Soil	VPAIAERLPAKSLVKAKAPKIIASREQHEAYIQRLLELQRKAHRSAEKTEMAKRLVVLIADYEAKQFTVEKA
Ga0210399_110850762	3300020581	Soil	MPAIAERLPAKYLIKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEGKHFIIEKASGVEVLKELMDTNGL
Ga0210399_114916922	3300020581	Soil	VPAIAERLPAKYLLKEEAPKIISSAQQHETYIQRLLELQRKAHRTAEETETAKLLIVLIADYEAKHFKI
Ga0210401_113508662	3300020583	Soil	VPATAERLPAKYLVKEEAPKIISSREQHEAYISRLLELQRKANRSAEETETAKLLIVLIADYESKHFVIEKASGVEVL
Ga0210405_113357222	3300021171	Soil	MPATAERLPAKYLVKEEAPKTISSPEQHQAYISRLLELQRKAHRSTEETETAKLLVVVIADY
Ga0210396_100240141	3300021180	Soil	VPATAERLPAKYLIKEEAPRIISSPEQHQAYISRLLELQRKAHRSTEETETAKLLVVVIADYE
Ga0210393_105412401	3300021401	Soil	MPAIAERLPTKYLVKSEAPKIIASREQHEAYIQRLLELQRKAHRSAEETETAKLLIILIADYEAKQFTVE
Ga0210383_110525892	3300021407	Soil	VPATAERLPAKYLVKEEAPRTISSPEQHQAYISRLLELQRKAHRSTEETETAKLLVVVIADYEAKHFVVEK
Ga0210394_117515891	3300021420	Soil	VPATAERLPAKYLVKEEAPKTISSPEQHQAYISRLLELQRKAHRSTEETETAKLLVVVIADYEAKHFVVEKASGVEVLRELMA
Ga0210391_109069011	3300021433	Soil	VPATAERLPAKYLVKEEAPRTISSPEQHHAYISRLLELQRKAHRSTEETETAKLLVVVIAAYEAKHFVIEKASG
Ga0213879_102440761	3300021439	Bulk Soil	VPVIAERLPAKYLVKEEAPKIVSSPQQHQAYISRLLDLQRKAHRTAEETETAKLLVVLIADYEA
Ga0210390_102594275	3300021474	Soil	VPATAERLPAKYLVKAEAPKIISSSEQHQAYISRLLELQRKAHRSAEETETAKLLVVLIADYEAKHFVVEK
Ga0210390_106365893	3300021474	Soil	MPAIAERLPAKYLVKGEAPKVIASREQHEAYIQRLLELQRKAHRSAEETETAKLLLVLIADYEAKQFTIEMAS
Ga0210398_100756431	3300021477	Soil	MPAIAERLPAKYLVKAEAPKVIASREQHEAYIQRLLELQRKAHRSAEETETAKLLVVLIADYEAKQFT
Ga0247693_100005341	3300024181	Soil	MPAIAERLPAKYLVKAEAPKTIASREQHEAYIQRLVELQRKGHRTVEETETAKLLVVLIADY
Ga0247669_10023309	3300024182	Soil	MPAIAKRLPAKYLVKAEAPKIIASREQHEAYIQRLLELQRKAHRSAEEAETAQLLVVLIA
Ga0247670_10208611	3300024283	Soil	MPAIAERLPAKYLVKAEAPKTIASREQHEAYIQRLVELQRKGHRTVEETETAKLLVVLIA
Ga0207693_101230094	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPAIAERLPAKYLIKAEAPKIIASREQYEAYIQMLLKLQRKAYRSAEETETAKLLVVLIADFEAKQFTIEKISGVEC
Ga0209350_10841572	3300026277	Grasslands Soil	MPAIAERLPAKYLIKDEAPKTISSPQQHEAYISRLLELQRKTHRTAEETETAKLLIVLIADYEGKHF
Ga0209688_10533462	3300026305	Soil	MPAIAERLPAKYLIKDEAPKTISSPQQHEAYISRLLELQRKTHRTAEETETAKLLIVLIADYEGKHFTI
Ga0257146_10883121	3300026374	Soil	VPAIAERLPAKYLVKEEAPKTISSREQHQAYISRLLELQRKAHRTAEETETAKLLIVLIADYEAKHFA
Ga0257168_10899331	3300026514	Soil	MPAIAERLPAKYLVKAEAPKIIASREQHEAYIQRLLELQRKAHRTAEETETAKLLVVLIADYEAKQCTIEKASGVEVLRELMDA
Ga0209805_13623691	3300026542	Soil	MPAIAERLPAKYLVKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEEMETAKLLVVLIADYEAKHFTIEKAS
Ga0209156_100112461	3300026547	Soil	MPAIAERLPAKYLIKDEAPKTISSSQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEAKHFTVEKASGVEVLKELMN
Ga0209161_100180691	3300026548	Soil	MPAIAERLPAKYLIKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEGTETAKLLIVLIADYEGKHFTIEKASGVEVLRELMDTNGLRQK
Ga0207781_10074951	3300026890	Tropical Forest Soil	VPVIAERLPAKYLVKEEAPKIISSPQQHQAYISRLLDLQRKAHRTAEETETAKLLVVLVADYEAKHFIVEKASGVEVLKELMESNGLRQK
Ga0207860_10318012	3300026921	Tropical Forest Soil	VPVIAERLPAKYLVKEEAPKIISSPQQHQAYISRLLDLQRKAHRTAEETETAKLLVVLIA
Ga0209530_11676272	3300027692	Forest Soil	VPATAERLPAKYLVKEEAPRTISSPEQHQAYISRLLELQRKAHRSTEETETAKLLVVVIADYEAKHF
Ga0209590_104260571	3300027882	Vadose Zone Soil	MPAIAERLPAKYLIKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEGKHFTIEKASGVEVLKEL
Ga0209068_101274734	3300027894	Watersheds	MPAIAERLPAKYLIKVEAPKTISSPQQLEAYISRLLELQRKAHRTAEETEIAKLLI
Ga0247682_11037891	3300028146	Soil	MSAIAERLPAKYLVKAEAPKIIASREQHEAYIQRLLELQHKAHRSAEETETAKLLV
Ga0210255_109363982	3300030589	Soil	MPAIAERLPAKYLVKAEAPKIIASREQHEAYIQRLLELQRKAHRSAEETETTKLLVVLIADYEAKQFERKE
Ga0170834_1009186793	3300031057	Forest Soil	VPAIAERLPAKYLVKAEAPKIIASREQHEAYIQRLLELQHKAHRSAEETETAKLLVVLIADYEAKQFTIEKASGVEVLRELMDANGLRQKGPCGRPRR
Ga0170822_134602622	3300031122	Forest Soil	MPAIAERLPAKYLVKAEAPKIIASREQHEAYIQRLLELQHKAHRSAQETETAKLLVVFIADYEAKQFTIEKASG
Ga0170823_168161094	3300031128	Forest Soil	VPAIAERLPAKYLVKAEAPKIIASREQHEAYIQRLLELQRKANRSAEETETAELLVVLIADYEAKQFTIEKASGVEVLRE
Ga0170824_1135282853	3300031231	Forest Soil	MPAIAERLPAKYLVKAEAPKIIASREQHEAYIQRLLELQRKGHRSAEETEMAKLLVVLIADYE
Ga0310686_10963745212	3300031708	Soil	VPATAERLPAKYLVKEEAPRTISSPEQHQAYISRLLELQRKAHRSTEETETAKLLVVVIADY
Ga0307474_103805881	3300031718	Hardwood Forest Soil	VPATAERLPAKYLVKAEAPKIISSSEQHQAYISRLLELQRKAHRSAEETETAKPLVVLIADYEAKHFVVAKVSGVDVLRELMAAHG
Ga0307478_110504551	3300031823	Hardwood Forest Soil	VPATAERLPAKYLIKAEAPKIISSSEQHQAYISRLLELQRKAHRSAEETETAKLLVVLIADYEAKHF
Ga0306926_124276952	3300031954	Soil	MPAIAERLPAKYLIKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEETETAKLLIVLIADYEGKHFIIEKASGVE
Ga0307479_108682773	3300031962	Hardwood Forest Soil	MPAIAERLPAKYLVKDEAPKTISSPQQHEAYISRLLELQRKAHRTAKEMETAKLLVVLIADYETKHFTIEKA
Ga0307479_121843201	3300031962	Hardwood Forest Soil	MPAIAERLPAKYLVKDEAPKTISSPQQHEAYISRLLELQRKAHRTAEETETAKLLVVLIADYEAKHFTIEKASGVEVLKELMDA
Ga0318533_103430473	3300032059	Soil	VPAIAEGLPAKYLVKAEAPKIIASREQHGAYIQRLLELQRKAHRSAEETETAKLLVVLIAHYEAKQFTIEKASGVEVLR
Ga0307510_104170272	3300033180	Ectomycorrhiza	MPAIAERLPAKYLVKAEAPKIIASRGQHEAYIQRLLELQRKAHRSAEETETAKLLVVLIADYETKQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094230

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences