Metagenome / Metatranscriptome Family F094200

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F094200
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	79 residues
Representative Sequence	MTTIAVLRRRSDLGQRWLRTGGDHARTDASHHRTQPATATLNDNLHQQTELLLSARRVINRLQRLCTPALTLIASLKSP
Number of Associated Samples	97
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.23 %
% of genes near scaffold ends (potentially truncated)	21.70 %
% of genes from short scaffolds (< 2000 bps)	90.57 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (68.868 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.472 % of family members)
Environment Ontology (ENVO)	Unclassified (33.962 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.774 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.27% β-sheet: 0.00% Coil/Unstructured: 46.73%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF04986	Y2_Tnp	50.00
PF14319	Zn_Tnp_IS91	8.49
PF13495	Phage_int_SAM_4	4.72
PF13676	TIR_2	0.94
PF01520	Amidase_3	0.94
PF03466	LysR_substrate	0.94
PF00589	Phage_integrase	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.87 %
Unclassified	root	N/A	31.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.87 %
Unclassified	root	N/A	31.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.87 %
Unclassified	root	N/A	31.13 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	67.92 %
Unclassified	root	N/A	31.13 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.09 %
Unclassified	root	N/A	31.13 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	61.32 %
Unclassified	root	N/A	31.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.13 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.38 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	6.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.13 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10.38 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	6.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.13 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	5.66 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2.83 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.83 %
unclassified Microvirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga	0.94 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.13 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	5.66 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2.83 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.83 %
Bradyrhizobium sp. LTSPM299	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSPM299	0.94 %
Microvirga sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp.	0.94 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16955862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	2209	Open in IMG/M
3300000567\|JGI12270J11330_10084891	Not Available	1470	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1014057	Not Available	1348	Open in IMG/M
3300001593\|JGI12635J15846_10306413	Not Available	991	Open in IMG/M
3300002239\|JGI24034J26672_10010276	Not Available	1388	Open in IMG/M
3300003350\|JGI26347J50199_1027051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	640	Open in IMG/M
3300003351\|JGI26346J50198_1000561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2641	Open in IMG/M
3300003505\|JGIcombinedJ51221_10014886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2624	Open in IMG/M
3300005147\|Ga0066821_1020155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	558	Open in IMG/M
3300005330\|Ga0070690_100053886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2574	Open in IMG/M
3300005363\|Ga0008090_15460746	Not Available	755	Open in IMG/M
3300005436\|Ga0070713_101090256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	772	Open in IMG/M
3300005602\|Ga0070762_10822049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	630	Open in IMG/M
3300005764\|Ga0066903_100976983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1544	Open in IMG/M
3300005764\|Ga0066903_101715040	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300005840\|Ga0068870_10602723	Not Available	746	Open in IMG/M
3300006041\|Ga0075023_100031723	Not Available	1558	Open in IMG/M
3300006041\|Ga0075023_100258226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	700	Open in IMG/M
3300006050\|Ga0075028_100253758	Not Available	966	Open in IMG/M
3300006050\|Ga0075028_100278335	Not Available	926	Open in IMG/M
3300006057\|Ga0075026_100380051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	790	Open in IMG/M
3300006086\|Ga0075019_10341668	Not Available	908	Open in IMG/M
3300006102\|Ga0075015_100244298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	971	Open in IMG/M
3300006175\|Ga0070712_100800672	Not Available	808	Open in IMG/M
3300006572\|Ga0074051_11700015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	524	Open in IMG/M
3300006574\|Ga0074056_11070663	Not Available	587	Open in IMG/M
3300009090\|Ga0099827_12002995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	503	Open in IMG/M
3300010043\|Ga0126380_10794435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	773	Open in IMG/M
3300010043\|Ga0126380_11342010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	625	Open in IMG/M
3300010046\|Ga0126384_10553331	Not Available	1000	Open in IMG/M
3300010359\|Ga0126376_11077449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	810	Open in IMG/M
3300010360\|Ga0126372_11192762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	785	Open in IMG/M
3300010366\|Ga0126379_10605357	Not Available	1182	Open in IMG/M
3300010376\|Ga0126381_104878308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	515	Open in IMG/M
3300010880\|Ga0126350_11997121	All Organisms → cellular organisms → Bacteria → Proteobacteria	725	Open in IMG/M
3300011106\|Ga0151489_1047935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp.	1927	Open in IMG/M
3300011270\|Ga0137391_10754681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	805	Open in IMG/M
3300012206\|Ga0137380_11772497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	501	Open in IMG/M
3300012210\|Ga0137378_11667191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	545	Open in IMG/M
3300012927\|Ga0137416_10963198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	761	Open in IMG/M
3300012971\|Ga0126369_12556220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	596	Open in IMG/M
3300014200\|Ga0181526_10152805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1479	Open in IMG/M
3300014489\|Ga0182018_10041484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	2859	Open in IMG/M
3300015068\|Ga0167645_106380	Not Available	1306	Open in IMG/M
3300016341\|Ga0182035_11913650	Not Available	538	Open in IMG/M
3300016371\|Ga0182034_12012881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	510	Open in IMG/M
3300016422\|Ga0182039_12181679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	511	Open in IMG/M
3300016445\|Ga0182038_10690701	All Organisms → cellular organisms → Bacteria → Proteobacteria	888	Open in IMG/M
3300018058\|Ga0187766_11239118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	541	Open in IMG/M
3300018062\|Ga0187784_10474503	Not Available	1009	Open in IMG/M
3300019789\|Ga0137408_1446915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1536	Open in IMG/M
3300020140\|Ga0179590_1197420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	552	Open in IMG/M
3300021403\|Ga0210397_10840957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	709	Open in IMG/M
3300021420\|Ga0210394_10261474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1515	Open in IMG/M
3300021475\|Ga0210392_10050536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	2558	Open in IMG/M
3300021478\|Ga0210402_10701396	Not Available	935	Open in IMG/M
3300021478\|Ga0210402_11667494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	564	Open in IMG/M
3300021861\|Ga0213853_10234392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1123	Open in IMG/M
3300025926\|Ga0207659_10637549	Not Available	910	Open in IMG/M
3300026319\|Ga0209647_1343508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	505	Open in IMG/M
3300026359\|Ga0257163_1046259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	693	Open in IMG/M
3300026489\|Ga0257160_1081504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	577	Open in IMG/M
3300026489\|Ga0257160_1103687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	513	Open in IMG/M
3300026494\|Ga0257159_1089680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	535	Open in IMG/M
3300026508\|Ga0257161_1036199	Not Available	979	Open in IMG/M
3300026515\|Ga0257158_1062682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	700	Open in IMG/M
3300026551\|Ga0209648_10768574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	526	Open in IMG/M
3300027512\|Ga0209179_1083321	Not Available	706	Open in IMG/M
3300027535\|Ga0209734_1004672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	2416	Open in IMG/M
3300027537\|Ga0209419_1028051	Not Available	1053	Open in IMG/M
3300027610\|Ga0209528_1063580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	817	Open in IMG/M
3300027663\|Ga0208990_1013540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	2714	Open in IMG/M
3300027674\|Ga0209118_1091369	Not Available	865	Open in IMG/M
3300027698\|Ga0209446_1074843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	864	Open in IMG/M
3300027701\|Ga0209447_10069420	Not Available	967	Open in IMG/M
3300027701\|Ga0209447_10096023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	814	Open in IMG/M
3300027703\|Ga0207862_1245412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	526	Open in IMG/M
3300027874\|Ga0209465_10475393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	625	Open in IMG/M
3300027882\|Ga0209590_10562551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	735	Open in IMG/M
3300027882\|Ga0209590_10985300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300027903\|Ga0209488_11139075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300027910\|Ga0209583_10062887	Not Available	1341	Open in IMG/M
3300028792\|Ga0307504_10198624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	709	Open in IMG/M
3300028792\|Ga0307504_10458078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300028906\|Ga0308309_11062008	Not Available	701	Open in IMG/M
3300030053\|Ga0302177_10053033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	2453	Open in IMG/M
3300031251\|Ga0265327_10158682	Not Available	1046	Open in IMG/M
3300031474\|Ga0170818_109815977	Not Available	1177	Open in IMG/M
3300031544\|Ga0318534_10201674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1148	Open in IMG/M
3300031545\|Ga0318541_10176363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1179	Open in IMG/M
3300031561\|Ga0318528_10370944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	768	Open in IMG/M
3300031564\|Ga0318573_10587230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300031573\|Ga0310915_10682753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	725	Open in IMG/M
3300031679\|Ga0318561_10537958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	643	Open in IMG/M
3300031765\|Ga0318554_10201970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1131	Open in IMG/M
3300031771\|Ga0318546_10187755	Not Available	1407	Open in IMG/M
3300031782\|Ga0318552_10631765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	546	Open in IMG/M
3300031845\|Ga0318511_10517700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSPM299	553	Open in IMG/M
3300031860\|Ga0318495_10132911	Not Available	1121	Open in IMG/M
3300031894\|Ga0318522_10145793	Not Available	891	Open in IMG/M
3300031896\|Ga0318551_10817623	Not Available	542	Open in IMG/M
3300032054\|Ga0318570_10449257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	588	Open in IMG/M
3300032064\|Ga0318510_10104046	Not Available	1083	Open in IMG/M
3300032090\|Ga0318518_10050539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1975	Open in IMG/M
3300032180\|Ga0307471_102839649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	615	Open in IMG/M
3300034817\|Ga0373948_0003033	All Organisms → cellular organisms → Bacteria → Proteobacteria	2543	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.28%
Host-Associated	Host-Associated	4.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.13%
Aquatic	Environmental → Aquatic	14.15%
Plants	Host-Associated → Plants	4.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.19%
Sediment	Environmental → Aquatic → Sediment	7.55%
Freshwater	Environmental → Aquatic → Freshwater	6.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.89%
Peat	Environmental → Terrestrial → Peat	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.26%
Loam	Environmental → Terrestrial → Soil → Loam	15.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.66%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.89%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.94%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.47%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.38%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	7.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.60%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.94%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.94%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.94%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.94%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.94%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300003350	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3	Environmental	Open in IMG/M
3300003351	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300015068	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8C, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01767750	2088090014	Soil	MTTIAVLRRRSDLGQRWIRTGGDHARTNASSHHRTQPATATLNDNLDQQAELLLSARLINRRQRLRAPALTLIA
JGI12270J11330_100848912	3300000567	Peatlands Soil	MTTIAVLRRRTDNLAPRWWQTGDDHARTNASAHHRTQPATATLSDNLHQKAELLLAAGRVISRPEGLRAPALVPSPSVKSP*
AP72_2010_repI_A001DRAFT_10140571	3300000893	Forest Soil	MTTIAVLGRRSDLGQRWLRTGGDHARTDASSHHRIQPATSTLNDHLDRQAELLLSTGHVITRLQPLRAPTLTLSASLNSP*
JGI12635J15846_103064131	3300001593	Forest Soil	MTTIAVLRRRSDLGQRWLRTGGDHVRTDASHHRTQPATATLNDNLHQQTELLLSARRVINRLQRLCTPALTLIASLKSP*
JGI24034J26672_100102762	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	MTTIAVLRRRSDLGQRWIRTGGDHAXTNASSHHRTQPATATLNDNLDQQAELLLSARLINRRQRLRAPALTLIA*
JGI26347J50199_10270512	3300003350	Bog Forest Soil	MTTIAVPRRRSDLGQRWLRTGGDHARTDASSHHRTQPATSTLNDNLDQQAELLLSTGHVITRLQRLCTPALTLIASLKSP*
JGI26346J50198_10005613	3300003351	Bog Forest Soil	MTTIAVLRRRSDNLAERWLRTGGDHARTDASSHHRTQPATATLNDNLDQQAERLLSAGRVTNRLQRLCAPALTLSESLKSP*
JGIcombinedJ51221_100148861	3300003505	Forest Soil	MTTIAVLRRRSDLGQRWIRTGGDHARTNASSHHRTQPATATLNDNLDQQAELLLSARLINRRQRLRAPALTLIA*
Ga0066821_10201552	3300005147	Soil	MTTIAILQRCNDLGERWLRTGGDHARTDDRTQPATATLNDNPDQQIELLLSARRVINPLQRLCGPTPTLSAPLNSP*
Ga0070690_1000538863	3300005330	Switchgrass Rhizosphere	MTTIAVLRRRSDLGQRWIRTGGDHACTNASSHHRTQPATATLNDNLDQQAELLLSARLINRRQRLRAPALTLIA*
Ga0008090_154607461	3300005363	Tropical Rainforest Soil	MTTIAILQRCNDLGERWLRTGGDHARTDASSHHRTQPATATLNDNPDQQIDLLLSASRVINRLQRLCGPTTTLSAPLNSP*
Ga0070713_1010902561	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTTLAILQRCNDLGERWLRTGGDHARTDASSHHRTQPATATLNDNPDQQIELLLSARRVINRLQRLCGPTPTLSAPLNSP*
Ga0070762_108220492	3300005602	Soil	MTTIAVLRRCSDLGPRWLRTGGDHARTDASSHHRTQPATSTLNDNLDQQAELLLPTGHVNTRLQRLCTPALTLIASLKSP*
Ga0066903_1009769832	3300005764	Tropical Forest Soil	MTTIAILQRCNDLGQRWLRTGGDHARTDASSHHRTQPATATLNDNSDQQIELLSSARRVVNRLQRLCGPTPTLSAPLNSP*
Ga0066903_1017150402	3300005764	Tropical Forest Soil	MTTSAVLRRRSDLGPRWLPTGGDHARTNASFHHRTQPATSTLNDNLDHQAELLLSTGHVIIRLQRLRTPALTLIASLKSP*
Ga0068870_106027231	3300005840	Miscanthus Rhizosphere	MTTIAVLRRRSDLGQRWIRTRGDHACTNASSHHRTQPATATLNDNLDQQAELLLSARLINRRQRLRAPALTLIA*
Ga0075023_1000317231	3300006041	Watersheds	MTTIAVLRRRSDLGQRWLHTGGDHARTDASHHRTQPATATLNDNLHQQAELLLSARHVINHLQRLCASTLSLSASLNSP*
Ga0075023_1002582262	3300006041	Watersheds	MTTIAVLRRRSDLGQRWLRTGGDHARTDASSHHRTQPATSTLNDNLAQKAELLLSTGHVINRLQRLCTPALTLIASLNSP*
Ga0075028_1002537582	3300006050	Watersheds	MTTIAVLRRRSDLGPRWLRTGGDHARTDASHHRTQPATATLNDNLDQQTELLLSARRVINRLQRRRAPALTLIASLKSP*
Ga0075028_1002783351	3300006050	Watersheds	MTTIAALRRHSDNLTQRWLRTGGDHARTDPSSHHQTQPATATLKDHLDHQAKLLLSARRVISHLEGLRATPLAPSPSLK
Ga0075026_1003800512	3300006057	Watersheds	MTTIAVLRRRSDLGQRWLHTGGDHARTDACHHPTQPAIATLNDNLHQQAELLLSARRVINRLQRLCASTLSLSASLNSP*
Ga0075019_103416681	3300006086	Watersheds	MTTIAALPRHSDNLTQRWLRTGGDHARTDPSSHLQTQPATATLKDHLDHQAKLLLSARRVISHLDGLRATPLAPSPSLKDAMRRTKAASVFL
Ga0075015_1002442982	3300006102	Watersheds	MTTIAALRRHSDNLTQRWLRTGGDHARTDPSSHHQTQPATATLKDHLDHQAKLLLSARRVISHLEGLRATPLPPSRSLKSP*
Ga0070712_1008006722	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTTIAVLRRRSDLGPRWLRTGGDHARTDASHHRTQPTTATLNDNLDQQTELLLSARRVINRLQRRCAPALTLIASLKSP*
Ga0074051_117000151	3300006572	Soil	MTTIAILQRCNDLGERWLRTGGDHARTDDRTQPATATLNDNPDQQIELLLSARRVINRRQRLCTPALTLIASLKSP*
Ga0074056_110706631	3300006574	Soil	YIMTTIAILQRCNDLGERWLRTGGDHARTDDRTQPATATLNDNPDQQIELLLSARRVINPLQRLCGPTPTLSAPLNSP*
Ga0099827_120029951	3300009090	Vadose Zone Soil	MTTIAVLRRRSDNVGQRWLRTGGDHARTDASSHHRTQPATATLNDNLDQQAELLPSAGHVINRLQRLCAPALTLSTSLKSP*
Ga0126380_107944352	3300010043	Tropical Forest Soil	MTTIAILQRCNDLGQRWLRTGGDHARTDASSHHRTQPATATLNDNPDQQIELLLSARRVTNRLQRLCAPTLTLSASLNSP*
Ga0126380_113420101	3300010043	Tropical Forest Soil	MTTIAVLRRRSDLGKRWLRTGGDHARTHASHHRTQPATTTLNDKLDHQTELLLAASRVINRLQPLCAPTLTLSTSPNSP*
Ga0126384_105533312	3300010046	Tropical Forest Soil	MTTIAVLRRRSDLGKRWLRTGGDHARTHASHHRTQPATATLNDNPDQQIELLLSARRVINPLQWLCAPTLTLSASLNSP*
Ga0126376_110774492	3300010359	Tropical Forest Soil	MTTIAILQRCNDLGQRWLRTGGDHARTDASSHHRTQPATATLNDNPDQQIELLLSARRVINRVQRLCGPTPTLSAPLNSP*
Ga0126372_111927622	3300010360	Tropical Forest Soil	MTTIAVLRRRSDLRQRWLPTGGDRARTDASHHRTQLATATLNDNLDQQTELLSSARRVINHLQRLCAPMLTLYASLNSP*
Ga0126379_106053572	3300010366	Tropical Forest Soil	MTTIAVLRRRSDLGQRWLRTGGDHARTDAPSHYQTQPATSALNDNLDQQAELLLSTGHVINHRQRLCTPALTLIASLKSP*
Ga0126381_1048783081	3300010376	Tropical Forest Soil	MTTIAVLRRRSDLGKRWLRTGGDHARTHASHHRTQPATTTLNDKLDHQTELLLAASRVINRLQPLCAPTLTLSASLNSP*
Ga0126350_119971212	3300010880	Boreal Forest Soil	MTTIAALRRHSDNFAQRWLRTGGDHARTDPSFHHQSQPATATLNDNLDHQAKLLSARRIIGRLEGLRAPPLAPSPSVKSP*
Ga0151489_10479353	3300011106	Soil	MTTIAILQRCNDLGERWLRTGGDHARTDDRTQPATATLNDNLDQQAELLLSARRVINRRQRLCAPALTLIASLKSP*
Ga0137391_107546812	3300011270	Vadose Zone Soil	MTTIAVLRRRSDNLAERWLRTGGDHARTDASSHHRTQPATATLNDNLDQQAERLLSAGRVTNRLQRLCTPVLSLSAPLNSP*
Ga0137380_117724972	3300012206	Vadose Zone Soil	MTTIAVLRRRSDNVGQRWLRTGGDHARTDASSHHRTQPATATLNDNLHQQAEPPLSARRVTNRLQRLCAPALTLSASLKSP*
Ga0137378_116671912	3300012210	Vadose Zone Soil	MTTIAVLRRPSDLGQRWLRTGGDHACTDASHHRTQPATATLNDNLDQQAELLPSAGHVINRLQRLCAPALTLSTSLKSP*
Ga0137416_109631981	3300012927	Vadose Zone Soil	MTTIAVLRRRSDNVGQRWLRTGGDHARTDASSHHRTQPATATLNDNLHQQAELLLSARRVINRRQRLCAPTLSLSASLNSP*
Ga0126369_125562202	3300012971	Tropical Forest Soil	MTTIAILQRCNDLGQRWLRTGGDHARTDASSHHRTQPATATLNDNPDQQIELLLSARRVINRLQRLCGLTPTLSAPLNSP*
Ga0181526_101528051	3300014200	Bog	MTTIAALRRHSNNLAQRWLRTGGDHARTDASSHHQSQPATATLNDNIDHQAKLLSARRIIGRLEGLRAPPLAPSQSVKSP*
Ga0182018_100414841	3300014489	Palsa	MTTIAALRRHSDNLTQRWLRTGGDHARTDPSSHHQTQPATATLNDNPDRQAKLLSARCIIGRLEGLRAPPLAPSPSIKSP*
Ga0167645_1063801	3300015068	Glacier Forefield Soil	MTTSAVLRRRSDLGQRWLRTGGDHVRTDASHHRTQPATATLNDNLHQQTALLLSARRVINRLQRFCTPALTLIASLKSP*
Ga0182035_119136501	3300016341	Soil	PAILSPEEVARLLEAAPLRRRSDLGPRWLPTGGDHARTNASFHHRTQSATSTLNDNLDHQAELLLSTGHVISRLQRLRTPALALIASLKSP
Ga0182034_120128811	3300016371	Soil	MTTSAVLRRRSDLGPRWLPTGGDHARTNASFHHRTQSATSTLNDNLDHQAELLLSTGHVISRLQRLRTPALAL
Ga0182039_121816791	3300016422	Soil	MTTIAVLRRPSDLAQRWLPTGGDHARTNASSHHRTQPATATLNDNLDQQTELLLSARRVINHLQPLRAPTLTLSASLNSP
Ga0182038_106907012	3300016445	Soil	ASSANRSNHCHQDRYIMTTIAVLRRRSDLGQRWLRTGGDHARTDASHHRTQPATATLNDNLDQQTELLLSARRVINHLQPLRAPTLTLSASLNSP
Ga0187766_112391181	3300018058	Tropical Peatland	MTTIAILQPCNDLGQRWLRTGGDHARTDASSHHRTQPATATLNDNLDRQTELLLSARRVINRLQRLRAP
Ga0187784_104745031	3300018062	Tropical Peatland	MTTIAVLRRPSDLGQRWLPTGGDHARTHASHHRTQPATATLNDNLDRQTELLLSARRVINRLQRLRAPTLTHSASLNSP
Ga0137408_14469151	3300019789	Vadose Zone Soil	MTTIAALRRHSDNLTQRWLRTGGDHARTDPSSHHQTQTATATLKDHLDHQAKLLLSARRVISHLEGLRATPLAPSPSLKSP
Ga0179590_11974201	3300020140	Vadose Zone Soil	MTTIAVLRRRSDNVGQRWLRTGGDHARTDASSHHRTQPATATLNDNLDHQAELLRSAGRVTNRLQRLCAPVLAPSASLNSP
Ga0210397_108409572	3300021403	Soil	MTTIAVPRQRSDLAQRWLRTGGDHARAGVPSHHRSQPATATFNDNLDQKTQMPLSAGRVINPRERLCAPALAPYPSVKSP
Ga0210394_102614743	3300021420	Soil	MTTIAVLLRHTDNLAPRWLRTGGDHVRLDASTHHRTQPATATLSDNLYQQAALVMAAGRVIGRSERLHAPALAPFPSVKSP
Ga0210392_100505363	3300021475	Soil	MTTIAVPRQRSDLAQRWLRTGGDHARAGVPSHHRSQPATATFNDNLDQKTQLPLSAGRVINPRERLCAPA
Ga0210402_107013962	3300021478	Soil	MTTIAVPRQRSDLAQRWLRTGGDHARAGVPSHHRSQPATATFNDNLDQKTQMPLSAGRVINPRERLCAPALPPYPSV
Ga0210402_116674941	3300021478	Soil	MTTIAVLRRRSHLGQRWLRTGGDHARTDASSHHRAQPATSTLNDNLDQQAELLLSTGHVINRLQRLCTPALKLIASLKSP
Ga0213853_102343922	3300021861	Watersheds	MTTIAVLRRRTDNLAPRWWQTGDDHARTNASAHHRTQPATATLSDNLHQKAELLLAAGRVISRPEGLRAPALVPSPSVKSP
Ga0207659_106375492	3300025926	Miscanthus Rhizosphere	MTTIAVLRRRSDLGQRWIRTGGDHARTNASSHHRTQPATATLNDNLDQQAELLLSARLINRRQRLRA
Ga0209647_13435082	3300026319	Grasslands Soil	MTTIAVLRRRSDNVGQRWLPPGGDHARTDASSHHRTQPATATLNDNLDQQAERLLSARRVINRLQRLCASTLSLSASLNSP
Ga0257163_10462592	3300026359	Soil	MTTIAVLRRPSDLGQRWLRTGGDHARTDASHHRTQPATATLNDNLDQQAELLRSAGRVTNRLQRLRAPALTLSASVKSP
Ga0257160_10815041	3300026489	Soil	MTTIAVLRRPSDLGQRWLRTGGDHARTDASHHRTQPATATLNDNLHQQAELLLLSARRVINRLQRLCASTLSLSAPLNSP
Ga0257160_11036871	3300026489	Soil	MTTIAALRRHSDNLTQRWLRTGGDHARTDPSSHHQTQPATATLNDNLDHQAKLLLSAGRIISRLEGLRAPPLASS
Ga0257159_10896802	3300026494	Soil	MTTIAVLRRRSDLGQRWLRAGGDHARTDASHHRTQPATATLNHNLHQHLHRQAELLLSARRVINRLQRLCASTLSLSASLNSP
Ga0257161_10361992	3300026508	Soil	MTTIAVLRRRSDLGQRWLRTGGDHARTDASSHHRTQPATATLNDNLHQQTALLLSARRVINRLQRLCTPALTLIASLKSP
Ga0257158_10626822	3300026515	Soil	MTTIAVLRRRSDLGQRWLRTGGDHARTDASSHHRTQPATSTLNDNLDQKAELLLSTGHVINRLQRLCTPALTLSASLNSP
Ga0209648_107685741	3300026551	Grasslands Soil	MTTIAVLRRRSDNVGQRWLRTGGDHARTDASSHHRTQPATATLNDNLDQQAERLLSARRVINRLQRLCASTLSLSASLNSP
Ga0209179_10833212	3300027512	Vadose Zone Soil	MTTIAVLRRRSDLGPRWLRTGGDHARTDASHHRTQPATATLNDNLHQQAELLLSARRVINRRQRLCAPTLSLSASLNSP
Ga0209734_10046721	3300027535	Forest Soil	MTTIAVLRRRSNLGQRWLRTGGDHARTDASHHRTQPATATFNDNLDQQTELLLPARCVINRLQRLCAPTLTLIASLKSP
Ga0209419_10280512	3300027537	Forest Soil	MTTIAALRRHSDNLAPRWLRTGGDHARTDPSSHHRTQPATATLSDNLYQQAALVMAAGRVIGRSERLHAPALAPFPSV
Ga0209528_10635801	3300027610	Forest Soil	MTKIAALRRHSDYLAQRWLRTGGDRARTDASSHHQSQPATATLNDNLDHQAKLLSARCIIGRLEGLRATPLAPSPSVKP
Ga0208990_10135401	3300027663	Forest Soil	MTTIAVLRRRSDNVGQRWLRTGGDHARTDASSHHRTQPATATLNDNLDQQAELLRSAGRVTNRLQRLRAPALTLSASVKSP
Ga0209118_10913691	3300027674	Forest Soil	MTTIAVLRRRSDLGQRWLRTGGDHARTDASHHRTQPATATLNDNLHQQTELLLSARRVINRLQRLCTPALTLIASLKSP
Ga0209446_10748432	3300027698	Bog Forest Soil	MTTIAVLRRRSDNLAERWLRTGGDHARTDASSHHRTQPATATLNDNLDQQAERLLSAGRVTNRLQRLCAPALTLSESLKSP
Ga0209447_100694201	3300027701	Bog Forest Soil	MTTIAVPRRRSDLGQRWLRTGGDHARTDASSHHRTQPATSTLNDNLDQQAELLLSTGHVITRLQRLCTPALTLIASLKSP
Ga0209447_100960232	3300027701	Bog Forest Soil	MTTIAVLRRRSHNLAQRWLRTGGDHARTDASSHHRTQPATATLNDNLDHQDELLRSAGRVTNRLQRLRASTLSPSASLNSP
Ga0207862_12454122	3300027703	Tropical Forest Soil	MTTIAASRRHSDNLTQRWLRTGGDHARTDPSSHHQTQPAIATLKDHLNHQAKLLLSPRRVISHLEGLRATPLPPS
Ga0209465_104753931	3300027874	Tropical Forest Soil	MTTIAILQRCNDLGQRWLRTGGDHARTDASSHHRTQPATATLNDNPDQQIELLLSARRVINRLQRLCGLTPTLSAPLNSP
Ga0209590_105625512	3300027882	Vadose Zone Soil	MTTIAVLRRPSDLGQRWLRTGGDHACTDASHHRTQPATATLNDNLHQQAELLLSARHVINRLQRLCASTLSLSTSLNS
Ga0209590_109853001	3300027882	Vadose Zone Soil	MTTIAVLRRRSDNVGQRWLRTGGDHARTDASSHHRTQPATATLNDNLDQQAELLPSAGHVINRLQRLCAPALTLSTSLKSP
Ga0209488_111390751	3300027903	Vadose Zone Soil	MTTIAVLRRRSDLGQRWLRTGGDHARTDASSHHRTQPATSTFNNNLDQQAELLLSTGHVINRLQRLCTPALTLTASLKSP
Ga0209583_100628872	3300027910	Watersheds	MTTIAVLRRRSDLGQRWLHTGGDHARTDASHHRTQPATATLNDNLHQQAELLLSARHVINHLQRLCASTLSLSASLNSP
Ga0307504_101986241	3300028792	Soil	MTTIAVLRRRSDLGQRWLRAGGDHARTDASHHRTQPATATLNHNLHQHLHRQAELLLSARRVINRLQRLCAPPLTLSESLNSP
Ga0307504_104580781	3300028792	Soil	MTTIAVLRRPSDNLGHRWLRTGGDHARTDASHHRTQPATATLNDNLHQQAERLLSAGRVTNRLQRLCAPTLTLSASLKSP
Ga0308309_110620082	3300028906	Soil	MTTIAVLRRRSDLGQRWLRTGGDHARTDASSHHRTQPATSTLNDNLDQQAELLLPTGHVNTRLQRLCTPALTLIASLKSP
Ga0302177_100530333	3300030053	Palsa	MTTIAALRRHSDNLTQRWLRTGGDHARTDPSSHHQTQPATATLNDNPDRQAKLLSARCIIGRLEGLRAPPLAPSPSIKSP
Ga0265327_101586822	3300031251	Rhizosphere	MTTIAVLRRHSDLGPRWLRTGGDHARTDASHHRTQPAPATLNDNLDQQTELLLPARRVINRLQRRCAPALTLIASLKSP
Ga0170818_1098159772	3300031474	Forest Soil	MTTIAVLRRRSDLGQRWLRTGGDHARTDASHHRTQPATATLNHNLHQHLHRQAELLLSARRVINRLQRLCAPPLTLSESLNSP
Ga0318534_102016741	3300031544	Soil	MTTIAILQRCNDLGERWLRTGGDHARTDASSHHRTQPATATLNDNPDQQIELLLSARRVNRLQRLCGPTPTLSAPLNSP
Ga0318541_101763632	3300031545	Soil	MTIIAFLRRRSDFGQRWLPTGGDHARTHASHHQTQPTTATRNDNLDQQTQLLVSARRIINHLQRLCAPTLTLSAPLNSP
Ga0318528_103709441	3300031561	Soil	MTTIAILQRCNDLGQRWLRTGGDHARTDASSHHRTQPATATLNDNPDQQIELLSSARRVNRLQRLCGPTPTLSAPFNSP
Ga0318573_105872301	3300031564	Soil	MTTIAVLRRRSDLGQRWLPTGGDHARTDPSHHRTQPAPATLNDNLDQQTELLSSARRVINHLQRRRAPTLTLSASLNSP
Ga0310915_106827532	3300031573	Soil	MTIIAFLRRRSDFGQRWLPTGGDHARTHASHHQTQPTTATRNDNLDQQTQLPQLLVSARRIINHLQRLCAPTLTLSAPLNSP
Ga0318561_105379581	3300031679	Soil	MTTIAVLRRRSGLAQRWLRTGGDHARTDAAHHRTQPPTATLNDDLDQHLDQQTQLLLSARRIINHLQRLCAPTLTLSAPLNSP
Ga0318554_102019701	3300031765	Soil	MTTIAILQRCNDLGQRWLRTGGDHARTDASSHHRTQPATATLNDNPDQQIELLSSARRVNRLQRLCGP
Ga0318546_101877553	3300031771	Soil	MTTIAILQRCNDLGQRWLRTGGDHARTDASSHHLTQPATATLNDNPGQQIELLSSARRIINHLQRLCGPTPTLSAPLNS
Ga0318552_106317652	3300031782	Soil	MTTIAILQRCNDLGQRWLRTGGDHARTDASSHHRTQPATATLNDNPDQQIELLLSARRVINRVQRLCGPTPT
Ga0318511_105177001	3300031845	Soil	MTTIAILQRCNDLGQRWLRTGGDHARTDASSHHRTQPATATLNDNPDQQIELLLSARRVINRLQRLCGPTPTLSAPLNSP
Ga0318495_101329111	3300031860	Soil	MTTIAILQRCNDLGQRWLRTGGDHARTDASSHHRTQPATATLNDNPDQQIELLSSARRVNRLQRLCGPTPTL
Ga0318522_101457931	3300031894	Soil	MTTIAILQRCNDLGQRWLRTGGDHARTDASSHHLTQPATATLNDNPDQQIELLSSARRVNRLQRLCGPTPTLSAP
Ga0318551_108176232	3300031896	Soil	SNHCHQDRYVMTIIAFLRRRSDFGQRWLPTGGDHARTHASHHQTQPTTATRNDNLDQQTQLLVSARRIINHLQRLCAPTLTLSAPLNSP
Ga0318570_104492572	3300032054	Soil	MTIIAFLRRRSDFGQRWLPTGGDHARTHASHHQTQPTTATRNDNLDQQTQLPQLLVSARRIINHLQRLCAPTLTLCA
Ga0318510_101040461	3300032064	Soil	MTTIAILQRCNDLGQRWLRTGGDHARTDASSHHRTQPATATLNDNPDQQIELLSSARRVNRLQRLCGPTPTLSAPLNSP
Ga0318518_100505393	3300032090	Soil	MTTIAILQRCNDLGQRWLRTGGDHARTDASSHHRTQPATATLNDNPDQQIELLLSARRVNRLQRLCGPTPTLSAPLNSP
Ga0307471_1028396491	3300032180	Hardwood Forest Soil	MTTAAVLRRRSDLGQRWLPTGSDHARTDASHHRTQPATATLNDNLNQQSELLLSARRVINRRQRLCAPTLTLSASLNSP
Ga0373948_0003033_2141_2359	3300034817	Rhizosphere Soil	MTTIAVLRRRSDLGQRWIRTGGDHARTNASSHHRTQPATATLNDNLDQQAELLLSARLINRRQRLRAPALTL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094200

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences