Metagenome / Metatranscriptome Family F094189

Overview

Basic Information

• Family ID: F094189
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 106
• Average Sequence Length: 42 residues
• Representative Sequence: TVPAEIDLKGKHARVADGQKCPRCGSSLEVAVVVHIPEAA
• Number of Associated Samples: 91
• Number of Associated Scaffolds: 106

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 33.33 %
• % of genes near scaffold ends (potentially truncated): 0.94 %
• % of genes from short scaffolds (< 2000 bps): 0.94 %
• Associated GOLD sequencing projects: 85
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (97.170 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.981 % of family members)
• Environment Ontology (ENVO): Unclassified (21.698 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (47.170 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 0.00%
  β-sheet: 5.88%
  Coil/Unstructured: 94.12%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00005	ABC_tran	7.55
PF11950	DUF3467	5.66
PF02423	OCD_Mu_crystall	5.66
PF12848	ABC_tran_Xtn	2.83
PF13545	HTH_Crp_2	0.94
PF13180	PDZ_2	0.94
PF03544	TonB_C	0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	5.66
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.94

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.17 %
All Organisms	root	All Organisms	2.83 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.17 %
cellular organisms	root	All Organisms → cellular organisms	2.83 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.17 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.83 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.83 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.17 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.94 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.17 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.94 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.17 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.94 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.17 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.94 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300011120|Ga0150983_10835262	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	561
3300014199|Ga0181535_10060690	All Organisms → cellular organisms → Bacteria → Acidobacteria	2556
3300014492|Ga0182013_10073713	All Organisms → cellular organisms → Bacteria → Acidobacteria	2429

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.96%
Host-Associated	Host-Associated	16.04%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.75%
Plants	Host-Associated → Plants	16.04%
Aquatic	Environmental → Aquatic	13.21%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.26%
Freshwater	Environmental → Aquatic → Freshwater	13.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.38%
Peat	Environmental → Terrestrial → Peat	6.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.66%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.94%
Cave	Environmental → Terrestrial → Cave	0.94%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.28%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.21%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.66%
Loam	Environmental → Terrestrial → Soil → Loam	3.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.94%
Lake	Environmental → Aquatic → Freshwater → Lake	0.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.94%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.15%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.49%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.60%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.66%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.77%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.94%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.55%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.72%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.83%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.83%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.89%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.89%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.89%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.94%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.94%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.94%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	0.94%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.94%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.94%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.94%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.94%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.94%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated
3300005650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_055 (Metagenome Metatranscriptome)	Environmental
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental
3300009587	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_9_15_C (Metagenome Metatranscriptome)	Environmental
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental
3300010379	Sb_50d combined assembly	Environmental
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental
3300011340	Combined Assembly of Wetland Metatranscriptomes	Environmental
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated
3300015372	Soil combined assembly	Host-Associated
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental
3300019187	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2 metaT (Metagenome Metatranscriptome)	Environmental
3300019189	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3 metaT (Metagenome Metatranscriptome)	Environmental
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental
3300022511	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental
3300025548	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)	Environmental
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental
3300025829	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B (SPAdes)	Environmental
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental
3300030580	II_Palsa_N1 coassembly	Environmental
3300030618	II_Palsa_E3 coassembly	Environmental
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300031866	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome) (v2)	Environmental
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental
3300033826	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 1-5	Environmental
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental
3300034653	Metatranscriptome of peat soil microbial communities from wetland fen in Alaska, United States - Frozen_pond_03R_16 (Metagenome Metatranscriptome)	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1058037042	3300000364	Soil	MCTHTVPAQIDLKGKHARVAAGQKCPRCGSSLEVAVVIHIPEAA*
JGI1027J12803_1056588931	3300000955	Soil	VPAEIDLKGKVPRVAKGQKCPRCGSSLEVAVVVQVPEAA*
JGI26339J46600_100649971	3300003218	Bog Forest Soil	ICTRTVPADIDLRGKYARVEQGQRCPRCGSSLDVAAVVQIPEAA*
Ga0070674_1005429871	3300005356	Miscanthus Rhizosphere	MAHCPMCTHTVPTEVDLRGKYARVAAGQKCSRCGSSLEVAVVIHV
Ga0070673_1002949561	3300005364	Switchgrass Rhizosphere	THTVPAEVDLKGKYARVAAGQKCPRCGSSLEVAVVIHVPEAA*
Ga0070665_1010141381	3300005548	Switchgrass Rhizosphere	PICTHTVPADIDIKGKIPRVTKGSKCPRCGSSLEVAVVVQVPEAA*
Ga0066700_109633523	3300005559	Soil	HTVPADIDLKGKFPRVAAGQKCSRCGSSLDVAAVIQIPEAA*
Ga0068857_1014908273	3300005577	Corn Rhizosphere	PMCTHTVPAQIDLKGKHARVAAGQKCPRCGSSLEVAVVIHIPEAA*
Ga0068859_1021590681	3300005617	Switchgrass Rhizosphere	AEIDLKGKHARVAAGQKCPRCGSSLEVAVVIHIPEAA*
Ga0068864_1015391761	3300005618	Switchgrass Rhizosphere	VPADIDIKGKIPRVARGAICPRCGSSLEVAVVVQVPEAA*
Ga0075038_111709231	3300005650	Permafrost Soil	TVPADIDLKGKRPRVAAGQKCVRCGSSLDVAAVIQIPEAA*
Ga0075038_114344432	3300005650	Permafrost Soil	MCTHTVAAEIDLKGKRARVAAGQKCSRCGSSLEVAVVIQIPEAA*
Ga0070717_100719575	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	IDLKGKFPRVEPGQKCARCGSSLDVAIVIQIPEAA*
Ga0070712_1018610933	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	PAEIDLKGKHARVAAGQKCPRCGSSLEVAVVIHIPEAA*
Ga0068865_1007279773	3300006881	Miscanthus Rhizosphere	VDLRGKYARVAAGQKCPRCGSSLEVAVVIHVPEAA*
Ga0075528_102028851	3300006949	Arctic Peat Soil	THTVQAQIDLKGKYARVAAGQKCARCGSSLEVAVVIQIPEAA*
Ga0073936_103312691	3300009175	Freshwater Lake Hypolimnion	THTVPAEVDVKGKKPHVIKGSKCPRCGSSLEVAVVVQVPEAA*
Ga0105242_124549783	3300009176	Miscanthus Rhizosphere	VPADIDIKGKIPRVARGAKCPRCGSSLEVAVVVQVPEAA*
Ga0116214_14016112	3300009520	Peatlands Soil	DIDLRGKYPRVTAGQKCPRCRSSLDVAVVVQIPEAA*
Ga0115602_12323281	3300009587	Wetland	CPICTHTVPAEVDLRGKRPRVAPGQRCPRCASSLDVAVIVQLPEAA*
Ga0116121_11507621	3300009644	Peatland	HCPICTHTVPADIDLRGKYPRVTSGQKCPRCGSALDVAAVVQIPEAA*
Ga0126372_111076863	3300010360	Tropical Forest Soil	ICTHTVPAEIDLKGKVPRVAKGQKCPRCGSSLEVAVVVQVPEAA*
Ga0136449_1010750451	3300010379	Peatlands Soil	DLKGRYARVASGQRCPRCSSSLDVAVVVQIPEAA*
Ga0126344_10938921	3300010866	Boreal Forest Soil	EVDIKGRIKIARVSPGQRCPRCGASLDVAVVVEIPQAA*
Ga0150983_108352622	3300011120	Forest Soil	AHCPICTHTVPAEIDLKGKYPRVASGQKCQRCGSSLEVAVVVQIPEAA*
Ga0150983_112919901	3300011120	Forest Soil	ICTHNVPADIDLKGKFARVTPGQRCPRCKSSLDVAVVIQIPEAA*
Ga0126317_103012701	3300011332	Soil	HCPMCTHTVPAEVDLRGKYARVAAGQKCPRCGSSLEVAVVIHVPEAA*
Ga0151652_135357862	3300011340	Wetland	MCTHTVPADVDLRGKYARVAAGQKCPRCGSSLEVAVVIHVPEAA*
Ga0137379_112884871	3300012209	Vadose Zone Soil	TVPAEIDFAGKKVRVAAGQKCPRCGSSLEVAVVVQIPEAA*
Ga0134051_12645731	3300012398	Grasslands Soil	PICTHTVPAEIDLKRKYPKVEPGQRCPRCSSSLDVAVVIQIPEAA*
Ga0150984_1084335201	3300012469	Avena Fatua Rhizosphere	DIDLRGKYPRVEAGQKCPRCGSALDVAAVIQIPEAA*
Ga0150984_1110813403	3300012469	Avena Fatua Rhizosphere	HTVPADLDLKRKFPRVEPGQRCPRCSSSLDVAVVIQIPEAA*
Ga0157369_105868071	3300013105	Corn Rhizosphere	DLKGKHARVAAGQKCPRCGSSLEVAVVIHIPEAA*
Ga0163162_102660843	3300013306	Switchgrass Rhizosphere	MCTHTVPAEVDLKGKYARVAAGQKCPRCGSSLEVAVVIHVPEAA*
Ga0181539_12988412	3300014151	Bog	MCTHTVPAEIEVKGKLARTAPGQTCARCGSSLDVAVVVQIPEAA*
Ga0181535_100606903	3300014199	Bog	MCTHTVPADVDVKGKAVRTAPGQDCPRCGSSLDVAVVVQFQEAA*
Ga0181535_102884161	3300014199	Bog	HCPICTHTVPAEIDLRGKYPRVMSGQKCPRCGSALDVAAVVQIPEAA*
Ga0182013_100737132	3300014492	Bog	MCTHTVPAEIDVKAKYVRTAPGQNCPRCGSSLDVAVVVQIPEAT*
Ga0182013_102998501	3300014492	Bog	DIDLRGKYPRVTSGQKCPRCRSALDVAAVVQIPEAA*
Ga0182019_105196751	3300014498	Fen	PICTHTVPAEIDLKGRYARVAPGQRCPRCSSSLDVAVVVQIPEAA*
Ga0182030_104687503	3300014838	Bog	MCTHTVPADVDVKGKFVRTAPGQTCPRCGSSLDVAVVVQIPEAA*
Ga0157376_120489001	3300014969	Miscanthus Rhizosphere	ADIDLTGSRPRVTKGSKCPRCGSSLEVAVVVQVPEAA*
Ga0157376_124858601	3300014969	Miscanthus Rhizosphere	HTVPADLDLKRKYPRVEPGQRCPRCSSSLDVAVVIQIPEAA*
Ga0132256_1016957911	3300015372	Arabidopsis Rhizosphere	MCTHTVPAEIDLKGKHARVAAGQKCPRCGSSLEVAVVIHIPE
Ga0187854_103165323	3300017938	Peatland	KGRYARVAPGQRCPRCSSSLDVAVVVQIPEAAQPGTYQH
Ga0187865_12320581	3300018004	Peatland	IDLKGRYARVAPGQRCPRCSSSLDVAVVVQIPEAA
Ga0187871_106666383	3300018042	Peatland	ADIDLRGKYPRVTSGQKCPRCGSALDVAAVVQIPEAA
Ga0184584_1439601	3300019187	Soil	ALCPICTHTVPAEVDLKGKLKFARVSPGQRCPRCGASLDVAVVIEVPQAA
Ga0184585_1002631	3300019189	Soil	EVDLKGKARIARVSPGQRCPRCGASLDVAVVVEIPQAA
Ga0181508_14203491	3300019256	Peatland	TVPAEIDLRGKYPRVLTGQKCPRCGSALDVAAVVQIPEAA
Ga0181512_15918512	3300019270	Peatland	CPICTHTVPAEVELKGKFKVARVSPGQRCTRCGSSLDVAVVVEIPQAA
Ga0187798_18438281	3300019275	Peatland	PAEIDLRGKYPKVSTGQTYPRCHSPLYVAAVIQIQEAA
Ga0187800_10222403	3300019278	Peatland	THTVPADIDLRGKYPRVSTGQKCPRCGSALDVAAVVQIPEAA
Ga0206353_113938732	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MCTHTVPAQIDLKGKHARVAAGQKCPRCGSSLEVAVVIHIPEAA
Ga0210407_105739143	3300020579	Soil	ICTHTVPADIDLKGKNPRVATGQRCTRCGASLDVAVIVQVPEAA
Ga0210401_108303481	3300020583	Soil	PLCTHNVPADIDLRGKYARVEQGQRCPRCNSSLDVAVVIQIPEAA
Ga0187846_100096294	3300021476	Biofilm	MGQVHCPICTHTVPAEIDLRGKRPLVVAGQKCMRCGSSLDVAVVVQIPEAA
Ga0242651_10379872	3300022511	Soil	VTASVDWKNKMKAARVTAGQRCPRCGSSLDVAVVVQLPQAA
Ga0242669_11216992	3300022528	Soil	HCPICTHTVPAEIDLRGKYPRVTSGQKCPRCGSPLDVAAVVQIPEAA
Ga0242658_10661813	3300022530	Soil	CTHNVEAEIDLKGKYPRVVPGQRCARCRSSLDVAVVFQYSQAA
Ga0242660_11355623	3300022531	Soil	CPICTHTVPAEIDFKGKFPRVARGQKCARCGSSLEVAVVVQVPEAA
Ga0242660_11565761	3300022531	Soil	THNVPADIELKGKFARVAPGQRCPRCKSSLDVAVVIQIPQAA
Ga0242660_12337603	3300022531	Soil	HTVPAEIDLKVKHARVAAGQKCPRCGSSLEVAVVIHILEAA
Ga0242655_101170031	3300022532	Soil	PICTHTVTAEIDLRGKYPRVASGQKCPRCGSALDVAAVIQIPEAA
Ga0242655_101858451	3300022532	Soil	HCPICTHNVLADIELKGKYPRVAAGQKCPRCGSSLDVAVVVQFSEAA
Ga0242674_10474142	3300022711	Soil	LCPICTHTVPAEVDLKGKLKFARVSPGQRCPRCGASLDVAVVIEVPQAA
Ga0242672_11162441	3300022720	Soil	PICTHTVAAEIDLRGKFPRVMNGQKCPRCGSALDVAAVVQIPEAA
Ga0242672_11475341	3300022720	Soil	ELDLRGKFPRVAEGQKCSRCGSSLDVAAVVQIPEAA
Ga0242654_103728491	3300022726	Soil	ADIELKGKYPRVAAGQKCPRCGSSLDVAVVVQFSEAA
Ga0224557_12905843	3300023101	Soil	IYLKGRRARVAPGQRCPRCSSSLDVAVVVQIPEAA
Ga0208716_10357483	3300025548	Arctic Peat Soil	PMCTHTVPAEIDLKGKYARTAPGQTCPRCRSSLDVAAVVQIPEAA
Ga0209385_12145791	3300025650	Arctic Peat Soil	MCTHTVPADLDLKGKHARVAAGQKCPRCGSSLEVAVVIHIPEAA
Ga0209484_101679833	3300025829	Arctic Peat Soil	THTVQAQIDLKGKYARVAAGQKCARCGSSLEVAVVIQIPEAA
Ga0207651_102033293	3300025960	Switchgrass Rhizosphere	THTVPAEVDLKGKYARVAAGQKCPRCGSSLEVAVVIHVPEAA
Ga0207703_122676732	3300026035	Switchgrass Rhizosphere	VDLRGKYARVAAGQKCPHCGSSLEVAVVILVPEAA
Ga0209689_13462073	3300027748	Soil	HTVPADIDLKGKFPRVAAGQKCSRCGSSLDVAAVIQIPEAA
Ga0311355_118712361	3300030580	Palsa	AEVDLKGKLKFARVSPGQRCPRCGASLDVAVVIEVPQAA
Ga0311354_102109231	3300030618	Palsa	PICTHTVPAEVDLKGKLKFARVSPGQRCPRCGASLDVAVVIEVPQAA
Ga0265461_113353301	3300030743	Soil	VPAEVDLKGKLKFARVSPGQRCPRCGAPLDVAVVIEIPQAA
Ga0138302_16659131	3300030937	Soil	HTVPAEIDLRGKYARVAAGQKCPRCHSALDVAAVVQIPEAA
Ga0308189_103069613	3300031058	Soil	AEVNLKGKTARVAPGQKCPRCTASLDVAVVVEVPEAA
Ga0170823_139435312	3300031128	Forest Soil	VTASVDWKNKMKAARVTQGQRCPRCGSSLDVAVVVQLPQAA
Ga0308194_103857672	3300031421	Soil	ICTHTVPADVELKGKVARVATGTKCPRCGSSLEVAVVV
Ga0170820_134314181	3300031446	Forest Soil	PICTHNVLADIELKGKYPRVAAGQKCPRCGSSLDVAVVVQYSEAA
Ga0170818_1032979173	3300031474	Forest Soil	AQIDLKGKHARVAAGQKCPRCGSSLEVAVVIHIPEAA
Ga0318541_106373333	3300031545	Soil	VPADIDLRGKFARVAPGQRCPRCLSSLDVAVVVQIPEAA
Ga0307483_10120351	3300031590	Hardwood Forest Soil	TVPAEIDLKGKHARVADGQKCPRCGSSLEVAVVVHIPEAA
Ga0310686_1074423151	3300031708	Soil	VPAEVDLKGKLKFARVSPGQRCTRCGASLDVAVVIEVPQAA
Ga0310686_1161288111	3300031708	Soil	LCPICTHTVPAEVDLKGKARIARVSPGQRCPRCGASLDVAVVVEIPQAA
Ga0310686_1166620922	3300031708	Soil	PAEIDLKGKLKFARVSPGQRCSRCGASLDVAVVIEIPQAA
Ga0316049_1061703	3300031866	Soil	ALCPICTHTVPAEVDLKGKLKFARVSPGQRCTRCGASLDVAVVIEVPQAA
Ga0308174_102199631	3300031939	Soil	HCPMCTHTVPAEVDLRGKYARVAAGQKCPRCGSSLEVAVVIHVPEAA
Ga0308174_105304811	3300031939	Soil	TVPADIDLKRKYPRVEPGQRCPRCSSSLDVAVVIQIPEAA
Ga0306920_1024523641	3300032261	Soil	CTHTVPAEIDFNGKKVRVAAGQKCPRCGSSLEVAVVVQIPEAA
Ga0348332_134748812	3300032515	Plant Litter	EVDLKGKQKIARVSVGQRCPRCGSSLDVAVVVEIPQAA
Ga0335079_122611892	3300032783	Soil	PAEIDLRGRRAKVAAGQRCPRCLSSLDVAVVVQIPEAA
Ga0335078_113764683	3300032805	Soil	TVPAEIDLRGKYPRVMSGQKCPRCGSALDVAAVVQIPEAA
Ga0335078_127381351	3300032805	Soil	ICTHTVPAEIDLRGKFPRVMRGQKCPRCGSALDVAAVVQIPEAA
Ga0335081_121586881	3300032892	Soil	ICTHTVPADVDYKGKGKYPRVVPGQKCPRCGSSLDVAVVVQIPEAA
Ga0335072_105517811	3300032898	Soil	THTVPAEIDLRGKSPRVASGQKCPRCGSALDVAAVVQIPEAA
Ga0310914_102819841	3300033289	Soil	VPAEIDFNGKKVRVAAGQKCPRCGSSLEVAVVVQIPEAA
Ga0326728_106220531	3300033402	Peat Soil	GHVHCPMCTHTVPAEIEVKGKLARTAPGQTCARCGSSLDVAVVVQIPEAA
Ga0326728_109622423	3300033402	Peat Soil	ADIDLKGRYARVAPGQRCPRCSSSLDVAVVVQIPEAA
Ga0334847_036790_98_217	3300033826	Soil	VQAEIDLKGKYARVAAGQKCARCGSSLEVAVIIQIPEAA
Ga0334827_153203_2_109	3300034065	Soil	IDLRGKYPRVTSGQKCPRCGSALDVAAVVQIPEAA
Ga0316599_141999_488_634	3300034653	Untreated Peat Soil	AHCPMCTHTVPAEIDLRGKHARVASGQKCPRCGSSLEVAVVIHIPEAA