Metagenome / Metatranscriptome Family F094176

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094176
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	46 residues
Representative Sequence	MTLQFLLFVIAVLLVSIFWELTKINKRLKTLLTQTKQDHSWAKKDAA
Number of Associated Samples	77
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.86 %
% of genes near scaffold ends (potentially truncated)	18.87 %
% of genes from short scaffolds (< 2000 bps)	78.30 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.717 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.075 % of family members)
Environment Ontology (ENVO)	Unclassified (44.340 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (77.358 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.00% β-sheet: 0.00% Coil/Unstructured: 40.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00196	GerE	3.77
PF12732	YtxH	2.83
PF00072	Response_reg	1.89
PF00106	adh_short	1.89
PF04365	BrnT_toxin	1.89
PF00578	AhpC-TSA	1.89
PF07238	PilZ	1.89
PF12002	MgsA_C	1.89
PF01791	DeoC	0.94
PF02781	G6PD_C	0.94
PF07730	HisKA_3	0.94
PF13751	DDE_Tnp_1_6	0.94
PF00239	Resolvase	0.94
PF01011	PQQ	0.94
PF00872	Transposase_mut	0.94
PF14384	BrnA_antitoxin	0.94
PF04226	Transgly_assoc	0.94
PF13570	PQQ_3	0.94
PF07681	DoxX	0.94
PF01713	Smr	0.94
PF00282	Pyridoxal_deC	0.94
PF00583	Acetyltransf_1	0.94
PF01063	Aminotran_4	0.94
PF04307	YdjM	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.89
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	1.89
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.94
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	0.94
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.94
COG1988	Membrane-bound metal-dependent hydrolase YbcI, DUF457 family	General function prediction only [R]	0.94
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.94
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.94
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.94
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.94
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.94
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.94
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.94
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.94
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
All Organisms	root	All Organisms	45.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
cellular organisms	root	All Organisms → cellular organisms	45.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.83 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.38 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.83 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.38 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.83 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.94 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.38 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.83 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	1.89 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.94 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.38 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.83 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1.89 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.94 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.38 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.83 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1.89 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.94 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.38 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.83 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1.89 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.94 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10199911	Not Available	1078	Open in IMG/M
3300004080\|Ga0062385_10467034	Not Available	771	Open in IMG/M
3300004635\|Ga0062388_100857341	Not Available	868	Open in IMG/M
3300005538\|Ga0070731_10212352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1284	Open in IMG/M
3300005541\|Ga0070733_10014877	All Organisms → cellular organisms → Bacteria	4884	Open in IMG/M
3300005541\|Ga0070733_11008120	Not Available	559	Open in IMG/M
3300005542\|Ga0070732_10064841	All Organisms → cellular organisms → Bacteria	2124	Open in IMG/M
3300005542\|Ga0070732_10381348	Not Available	850	Open in IMG/M
3300005591\|Ga0070761_10218208	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300005591\|Ga0070761_10454911	Not Available	786	Open in IMG/M
3300005591\|Ga0070761_10458407	Not Available	783	Open in IMG/M
3300005602\|Ga0070762_10010288	Not Available	4684	Open in IMG/M
3300005602\|Ga0070762_10080682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1849	Open in IMG/M
3300005602\|Ga0070762_10358236	Not Available	931	Open in IMG/M
3300005602\|Ga0070762_10600496	Not Available	731	Open in IMG/M
3300005610\|Ga0070763_10479367	Not Available	709	Open in IMG/M
3300005610\|Ga0070763_10999239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300005712\|Ga0070764_10023489	All Organisms → cellular organisms → Bacteria	3081	Open in IMG/M
3300005712\|Ga0070764_10112990	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300005921\|Ga0070766_10625134	Not Available	725	Open in IMG/M
3300006176\|Ga0070765_100188571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1865	Open in IMG/M
3300006176\|Ga0070765_100500109	Not Available	1142	Open in IMG/M
3300009520\|Ga0116214_1083476	Not Available	1170	Open in IMG/M
3300009623\|Ga0116133_1063995	Not Available	916	Open in IMG/M
3300010154\|Ga0127503_11006454	Not Available	909	Open in IMG/M
3300010358\|Ga0126370_12028251	Not Available	563	Open in IMG/M
3300010366\|Ga0126379_12878085	Not Available	576	Open in IMG/M
3300010379\|Ga0136449_100221354	Not Available	3561	Open in IMG/M
3300010379\|Ga0136449_101617467	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300011120\|Ga0150983_14055494	Not Available	510	Open in IMG/M
3300017822\|Ga0187802_10127133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300017924\|Ga0187820_1093258	Not Available	859	Open in IMG/M
3300017924\|Ga0187820_1100543	All Organisms → cellular organisms → Bacteria → Proteobacteria	832	Open in IMG/M
3300017933\|Ga0187801_10235618	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300017936\|Ga0187821_10045290	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300017940\|Ga0187853_10394729	Not Available	613	Open in IMG/M
3300017942\|Ga0187808_10524735	Not Available	550	Open in IMG/M
3300017946\|Ga0187879_10364782	Not Available	801	Open in IMG/M
3300017946\|Ga0187879_10522283	Not Available	659	Open in IMG/M
3300017955\|Ga0187817_10569945	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300017995\|Ga0187816_10030002	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2198	Open in IMG/M
3300018006\|Ga0187804_10071326	All Organisms → cellular organisms → Bacteria → Proteobacteria	1390	Open in IMG/M
3300018009\|Ga0187884_10443689	Not Available	522	Open in IMG/M
3300018019\|Ga0187874_10405486	Not Available	550	Open in IMG/M
3300018042\|Ga0187871_10047662	All Organisms → cellular organisms → Bacteria	2594	Open in IMG/M
3300020579\|Ga0210407_10262644	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1346	Open in IMG/M
3300020580\|Ga0210403_10011279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7249	Open in IMG/M
3300020580\|Ga0210403_10521114	Not Available	965	Open in IMG/M
3300020581\|Ga0210399_10207159	Not Available	1632	Open in IMG/M
3300020581\|Ga0210399_10519373	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	989	Open in IMG/M
3300020582\|Ga0210395_10033702	All Organisms → cellular organisms → Bacteria	3755	Open in IMG/M
3300020582\|Ga0210395_10130039	All Organisms → cellular organisms → Bacteria	1873	Open in IMG/M
3300020582\|Ga0210395_10276817	Not Available	1262	Open in IMG/M
3300021168\|Ga0210406_10284561	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300021168\|Ga0210406_10692959	Not Available	786	Open in IMG/M
3300021170\|Ga0210400_10069162	Not Available	2763	Open in IMG/M
3300021171\|Ga0210405_10165647	Not Available	1751	Open in IMG/M
3300021171\|Ga0210405_10996643	Not Available	632	Open in IMG/M
3300021180\|Ga0210396_10140956	All Organisms → cellular organisms → Bacteria → Acidobacteria	2169	Open in IMG/M
3300021180\|Ga0210396_10367391	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300021181\|Ga0210388_10101890	All Organisms → cellular organisms → Bacteria	2459	Open in IMG/M
3300021181\|Ga0210388_10232046	Not Available	1618	Open in IMG/M
3300021181\|Ga0210388_10845261	Not Available	791	Open in IMG/M
3300021401\|Ga0210393_10008092	All Organisms → cellular organisms → Bacteria	8245	Open in IMG/M
3300021402\|Ga0210385_10269479	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1256	Open in IMG/M
3300021404\|Ga0210389_10084505	All Organisms → cellular organisms → Bacteria	2439	Open in IMG/M
3300021405\|Ga0210387_10683486	Not Available	910	Open in IMG/M
3300021407\|Ga0210383_10013370	All Organisms → cellular organisms → Bacteria	6942	Open in IMG/M
3300021420\|Ga0210394_10180560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1838	Open in IMG/M
3300021475\|Ga0210392_10386410	All Organisms → cellular organisms → Bacteria → Acidobacteria	1018	Open in IMG/M
3300021477\|Ga0210398_10068718	All Organisms → cellular organisms → Bacteria	2884	Open in IMG/M
3300021478\|Ga0210402_10114651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2431	Open in IMG/M
3300021478\|Ga0210402_11384153	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	631	Open in IMG/M
3300021559\|Ga0210409_10000046	All Organisms → cellular organisms → Bacteria	277311	Open in IMG/M
3300022522\|Ga0242659_1120544	Not Available	535	Open in IMG/M
3300022528\|Ga0242669_1038952	Not Available	775	Open in IMG/M
3300022528\|Ga0242669_1087053	Not Available	588	Open in IMG/M
3300022721\|Ga0242666_1087820	Not Available	705	Open in IMG/M
3300023030\|Ga0224561_1024901	Not Available	531	Open in IMG/M
3300024225\|Ga0224572_1021283	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300024227\|Ga0228598_1000600	All Organisms → cellular organisms → Bacteria	7566	Open in IMG/M
3300027173\|Ga0208097_1031084	Not Available	615	Open in IMG/M
3300027652\|Ga0209007_1167033	Not Available	544	Open in IMG/M
3300027729\|Ga0209248_10020074	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2089	Open in IMG/M
3300027737\|Ga0209038_10036834	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1458	Open in IMG/M
3300027853\|Ga0209274_10351233	Not Available	760	Open in IMG/M
3300027854\|Ga0209517_10245052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1076	Open in IMG/M
3300027867\|Ga0209167_10689905	Not Available	558	Open in IMG/M
3300027869\|Ga0209579_10344819	Not Available	806	Open in IMG/M
3300028906\|Ga0308309_10056131	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2865	Open in IMG/M
3300030743\|Ga0265461_13742233	Not Available	517	Open in IMG/M
3300031057\|Ga0170834_103293874	Not Available	952	Open in IMG/M
3300031231\|Ga0170824_101358097	Not Available	562	Open in IMG/M
3300031708\|Ga0310686_100939948	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300031708\|Ga0310686_113740130	Not Available	616	Open in IMG/M
3300031708\|Ga0310686_114544195	Not Available	869	Open in IMG/M
3300031708\|Ga0310686_114854816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300031708\|Ga0310686_115217093	Not Available	512	Open in IMG/M
3300031715\|Ga0307476_10357798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300031718\|Ga0307474_10000177	All Organisms → cellular organisms → Bacteria → Acidobacteria	47154	Open in IMG/M
3300031753\|Ga0307477_10283424	Not Available	1145	Open in IMG/M
3300031754\|Ga0307475_10625404	Not Available	861	Open in IMG/M
3300032160\|Ga0311301_12929101	Not Available	516	Open in IMG/M
3300032180\|Ga0307471_104281918	Not Available	504	Open in IMG/M
3300032515\|Ga0348332_12807988	All Organisms → cellular organisms → Bacteria → Proteobacteria	1268	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.11%
Host-Associated	Host-Associated	1.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.36%
Aquatic	Environmental → Aquatic	20.75%
Plants	Host-Associated → Plants	1.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.42%
Freshwater	Environmental → Aquatic → Freshwater	20.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.89%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.49%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.81%
Loam	Environmental → Terrestrial → Soil → Loam	17.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.89%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.38%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	8.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.08%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	15.09%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	8.49%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.55%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.66%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.72%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.94%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.94%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_101999113	3300004080	Bog Forest Soil	MIAQFFLFVVAVLLISIFWELTKINHCLKTLLSQSKQDYEWAKKRAA*
Ga0062385_104670341	3300004080	Bog Forest Soil	MILQFLLFVIAVLLISIFWELTKINKRLKTLVTQEKRDAGWARKDAA*
Ga0062388_1008573412	3300004635	Bog Forest Soil	MIAQFLLFVIAVLLVSIFWELTKINNRLKALLTPQKQDHDWAKRDAA*
Ga0070735_104300271	3300005534	Surface Soil	MTAQFLLFVVAVLLVSIFWELTKINNRLKTLLTQTKQG
Ga0070731_102123521	3300005538	Surface Soil	MALQFLLFVIAVLLISIFWELTKINKNFKTLITLRRADYGWAKKDAA*
Ga0070733_100148776	3300005541	Surface Soil	MIVQFLLFVIAVLLVSIFWELTKINKRLKALLSPQKQDHDWAKRDAA*
Ga0070733_110081202	3300005541	Surface Soil	MIVQFLLFVIAIELFSIFWEMTKMNYRLKTLLTQNKQDHEWAKKDAA*
Ga0070732_100648411	3300005542	Surface Soil	AQFLLFVVAVLLVSIFWELTKINNRLKTLLTQTKQGYGWGKKDAA*
Ga0070732_103813482	3300005542	Surface Soil	MAAQFLLFVVAVLLVSIFWELTKINHRLKTLLTQTKQGYDWAKKDAA*
Ga0070761_102182082	3300005591	Soil	MIAQFFLFVVAVLLISIFWELTKINDCLKTLLSQSKQNDEWAKKRAA*
Ga0070761_104549111	3300005591	Soil	MIVQFLLFVIAVLLVSIFWELTKINNRFKALLTPNRQDHGWAKRDAA*
Ga0070761_104584071	3300005591	Soil	MVLQFLLFIIAVLLVSIFWELTKINKHLRTLLTQRKTDHDWAKKDAA*
Ga0070762_100102882	3300005602	Soil	MTAQFFLFVVAVLLVSIFWELSKINHRLKTLLSQTKQDYEWAKKGAA*
Ga0070762_100806822	3300005602	Soil	MIVQFLLFVIAVLLVSIFWELTKINDRLKTLLTSKKQDHDWAKQDAA*
Ga0070762_103582361	3300005602	Soil	MVLQFLLFVIAVLLVSIFWELTKINKHLRTVLTQRKTDHDWAKKDAA*
Ga0070762_106004961	3300005602	Soil	MVVQFLLFVIAVLLVSVFWELTKINNRLKALLTPNKQDHDWAKRDAA*
Ga0070763_104793672	3300005610	Soil	MIVQFLLFVIAVLLLSIFWELTKINNRLKTLLTPKKQDHDWPKQDAA*
Ga0070763_109992392	3300005610	Soil	QFLLFVIAVLLVSIFWELTKINKRLKTLVTQEKRDAGWARKDAA*
Ga0070764_100234893	3300005712	Soil	MIAQFFLFVVAVLLVSIFWELTKINHRLKTLLSQSKQDYEWAKKSAA*
Ga0070764_101129902	3300005712	Soil	MILQFLLFVIAVLLVSIFWELTKINKRLKTLVTQEKRDAGWARKDAA*
Ga0070766_106251341	3300005921	Soil	MVVQFLLFVIAVLLVSIFWELTKINDRLKTLLTQNKQDRDWPKQDAA*
Ga0070765_1001885715	3300006176	Soil	LPLKAKKMMIQFLLFVMAVLLLSIFWELSKINNRLKSLLTQTKQDHNWAKKEAA*
Ga0070765_1005001093	3300006176	Soil	MIVQFLLFVIAVLLLSIFWELTKINNRLKTLLTPKKQD
Ga0116214_10834762	3300009520	Peatlands Soil	MIAQFLLFVITVELLSIFWELTKMNYRLKTLLTQNKQDHEWAKKDAA*
Ga0116133_10639952	3300009623	Peatland	MIVQFLLFVIAVLLVSIFWELTKINNRLKALLTPAKQDHDWAKRDAA*
Ga0127503_110064542	3300010154	Soil	MIAQFLLFVIAIELLSIFWELTKMNYRLKTLLSQNKQDHEWAKKDAA*
Ga0126370_120282511	3300010358	Tropical Forest Soil	MVLQFLLFVMAVLLVSIFWELTKINKHLQTLLGQRKTDYGWAKKDVA*
Ga0126379_128780852	3300010366	Tropical Forest Soil	MTAQFLLFVVAVLLVSIFWELSKINDRLKSLLTQQKHDYEWAKKGAA*
Ga0136449_1002213542	3300010379	Peatlands Soil	MIAQFLLFVITVELLSIFWELTKMNYRLKTLLAQNKQDHEWAKKDAA*
Ga0136449_1016174671	3300010379	Peatlands Soil	MLSPMILQFLLFVIAVLLVSIFWELTKINKRLKTFVTPKKQDYDLAKKDAA*
Ga0150983_140554941	3300011120	Forest Soil	GQKMTAQFFLFVVAVLLVSIFWELSKINHRLKTLLSQTKQDYEWAKKGAA*
Ga0187802_101271332	3300017822	Freshwater Sediment	MVLQFLLFVIAVLLVSIFWELTKINKHLRTLLTQRKTDH
Ga0187820_10932582	3300017924	Freshwater Sediment	MTLQFLLFVIAVLLVSIFWELTKINKRLKTLLTQTKQDHSWAKKDAA
Ga0187820_11005431	3300017924	Freshwater Sediment	MVLQFLLFVIAVLLVSIFWELTKINKHLRTLLTQRKTDHDWAKKHAA
Ga0187801_102356182	3300017933	Freshwater Sediment	MMLQFLLFVIAVLLVSIFWELTKMNYRLKTLLAQNKQDHEWAKKDAA
Ga0187821_100452902	3300017936	Freshwater Sediment	MMLQFLLFVIAVLLVSIFWELTKINKRLKTLLTKEKQDHDWAKKDAA
Ga0187853_103947291	3300017940	Peatland	MIVQFLLFVIAVLLVSIFWELTKINNRLKALLTPAKQDHDWAKRDAA
Ga0187808_105247351	3300017942	Freshwater Sediment	MIVPFLLFVITVELFSIFWELTKINKHLRTVLTQRKTDHEWAKKDAA
Ga0187879_103647821	3300017946	Peatland	MIAQFLLFVIAVLLVSIFWELTKINNRLKALLTPQKQDHDWAKRDAA
Ga0187879_105222831	3300017946	Peatland	MIAQFFLFVVAVLLISIFWELTKINDCLKTLLSQSKQNDEWAKKRAA
Ga0187817_105699452	3300017955	Freshwater Sediment	MMLQFLLFVIAVLLVSIFWELTKINKRLKTLLTKEKQDHDWAKK
Ga0187816_100300023	3300017995	Freshwater Sediment	VPFLLFVITVELFSIFWELTKMNYRLKTLLAQNKQDHEWAKKDAA
Ga0187804_100713262	3300018006	Freshwater Sediment	MVLQFLLFVIAVLLVSIFWELTKINKHLRTLLTQRKTDHDWAKKDAA
Ga0187884_104436891	3300018009	Peatland	MIAQFFLFVVAVLLISIFWELTKINHCLKTLLSQSKQDYEWAKKRAA
Ga0187874_104054861	3300018019	Peatland	MIAQFLLFVIAVLLVSIFWELTKINNRLKALLTPAKQDHDWAKRDAA
Ga0187871_100476623	3300018042	Peatland	MIAQFFLFVVAVLLISIFWELTKINHRLKTLLSQSKQDYEWAKKRAA
Ga0210407_102626441	3300020579	Soil	MIAQFLLFVIAVQLLSIFWELTKISDRLKTLLTQNKQDHEWARKDAA
Ga0210403_100112797	3300020580	Soil	MIAQFLLFVIAVQLLSIFWELTKISDRLKTLLTQNKQDHEWVRKDAA
Ga0210403_105211141	3300020580	Soil	MIAQFLLFVIAVELFSIFWELTKMNHRLKTLLTRNKQDHEWAKKDAA
Ga0210399_102071591	3300020581	Soil	MAAQFLLFVIAVLLVSIFWELTKINNRLKTLFTQSKQDYDLAKKAAA
Ga0210399_105193733	3300020581	Soil	MAIQFLLFVIAVLLVSIFWELTKINKRLNLNQKKTGDDWAKKDAA
Ga0210395_100337022	3300020582	Soil	MIVQFLLFVIAVLLLSIFWELTKINNRLKTLLTPKKQDHDWPKQDAA
Ga0210395_101300393	3300020582	Soil	MIVQFLLFVIAVLLVSIFWELTKINNRLKALLTPNKKDHDWAKRDAA
Ga0210395_102768172	3300020582	Soil	MIVQFLLFVIAVLLVSIFWELTKINDRLKTLLTSKKQDHDWAKQDAA
Ga0210406_102845612	3300021168	Soil	MIAQFLLFVIAIELVSIFWELTKMNYRLKTLLSQNKQDHEWAKKDAA
Ga0210406_106929591	3300021168	Soil	MTVLFLLFVMSVLLVSIFWELTKINNRLKTLLTQTKQDHNWAKKDAA
Ga0210400_100691623	3300021170	Soil	MTAQFFLFVVAVLLVSIFWELSKINHRLKTLLSQTKQDYEWAKKGAA
Ga0210405_101656471	3300021171	Soil	MVVQFLLFVIAVLLVSIFWELTKINNRLKTLLTQNKQDHDWPKQDAA
Ga0210405_109966432	3300021171	Soil	MVLQFLLFVIAVLLVSIFWELTKINKHLRTVLTQRKTDHDWAKKDAA
Ga0210396_101409563	3300021180	Soil	MMIQFLLFVMAVLLLSIFWELSKINNRLKSLLTQTKQDHHWAKKEAA
Ga0210396_103673913	3300021180	Soil	MIVQFLLFVIAVLLVSIFWELTKINNRLKALLTPNKQDHDWAKRDAA
Ga0210388_101018901	3300021181	Soil	MVLQFLLFIIAVLLVSIFWELTKINKHLRTLLTQRKTGHDWAKKDAA
Ga0210388_102320462	3300021181	Soil	MMVQFLLFVIAVELFSIFWELTKMNYRLKALLTQNKQDHEWAKKDAA
Ga0210388_108452612	3300021181	Soil	MIVQFLLFLIAIELFSIFWELTKMNERLKRLLIQNKQDHEWAKKDAA
Ga0210393_100080924	3300021401	Soil	MIVQFLLFVIAVLLVSVFWELTKINNRLRALLAPNKRDQGWAKRDAA
Ga0210385_102694791	3300021402	Soil	MMVQFLLFVIAVELFSIFWELTKMNYRLKALLTQNKQDHEWARKDAA
Ga0210389_100845052	3300021404	Soil	MIAQFLLFVIAVQLLSIFWELTKISNRLKTLLTQNKQDHEWARKDAA
Ga0210387_106834863	3300021405	Soil	MAIQFLLFVIAVLLVSIFWELTKINKRLNTLLIQNKTGGDWAKKDAA
Ga0210383_100133709	3300021407	Soil	MVVQFLLFVIAVLLVSIFWELTKINDRLKTLLTQNKQDRDWPKQDAA
Ga0210394_101805603	3300021420	Soil	MVLQFLLFIIAVLLVSIFWELTKINKHLRTLLTQRKTDHDWAKKDAA
Ga0210392_103864102	3300021475	Soil	MALQFLLFVIAVLLISIFWELTKINKNFKTLITLRKADYGWAKKDAA
Ga0210398_100687181	3300021477	Soil	MVVQFLLFVIAVLLVSVFWELTKINNRLKALLTPNKQDHDWAKRDAA
Ga0210402_101146514	3300021478	Soil	MAIQVLLFVIAVLLVSIFWELTKINKRLNLNQKKTGDDWAKKDAA
Ga0210402_113841531	3300021478	Soil	MIVQFLLFLIAVELFSIFWELTKMNERLKRLLIQNKQDHEWAKKDAA
Ga0210409_1000004640	3300021559	Soil	MTLQFLLFVIAVLLVSIFWELTKINHRLKTLLTQTKQDHNWAKKDAA
Ga0242659_11205441	3300022522	Soil	VQFLLFVIAVLLVSIFWELTKINDRLKTLLTSKKQDHDWAKQDAA
Ga0242669_10389521	3300022528	Soil	KMIVQFLLFVIAVLLVSIFWELTKINNRLKALLTPNKKDHDWAKRDAA
Ga0242669_10870532	3300022528	Soil	LKAKKMMIQFLLFVMAVLLLSIFWELSKINNRLKSLLTQTKQDHHWAKKEAA
Ga0242666_10878201	3300022721	Soil	EGQKMIAQFFLFVVAVLLISIFWELTKINDCLKTLLSQSKQNDEWAKKRAA
Ga0224561_10249011	3300023030	Soil	MIVQFLLFVVAVLLVSIFWELTKINNRLKALLTPNKQDHDWPKRDAA
Ga0224572_10212833	3300024225	Rhizosphere	MIAQFFLFVVAVLLISIFWELTKINHCLKTLLSQSKQDNEWAKKRAA
Ga0228598_10006008	3300024227	Rhizosphere	MIVQFLLFVIAVLLVSVFWELTKINNRLKALLTPNKQDHDWPKRDAA
Ga0208097_10310841	3300027173	Forest Soil	MIVQFLLFVIAVLLVSIFWELTKINDRLKTLLTSKKQDHDWAKQDA
Ga0209007_11670331	3300027652	Forest Soil	MIVQFLLFVVAVLLVSIFWELTKINNRLKALLTPNKQDHDWAKRDAA
Ga0209248_100200741	3300027729	Bog Forest Soil	MIAQFFLFVVAVLLISIFWELTKINKRLKTLVTQEKRDAGWARKDAA
Ga0209038_100368342	3300027737	Bog Forest Soil	MILQFLLFVIAVLLISIFWELTKINKRLKTLVTQEKRDAGWARKDAA
Ga0209274_103512331	3300027853	Soil	MIVQFLLFVIAVLLVSIFWELTKINNRLKALLTPNKQDHGWAKRDAA
Ga0209517_102450522	3300027854	Peatlands Soil	MIVQFLLFVVTVELFSIFWELTKMNHRLKTLLAQNKQDHEWAKKDAA
Ga0209167_106899051	3300027867	Surface Soil	MIVQFLLFVIAIELFSIFWEMTKMNYRLKTLLTQNKQDHEWAKKDAA
Ga0209579_103448191	3300027869	Surface Soil	MALQFLLFVIAVLLISIFWELTKINKNFKTLITLRRADYGWAKKDAA
Ga0308309_100561316	3300028906	Soil	FLLFVIAVLLVSIFWELTKINKRLKTLVTQEKRDAGWARKDAA
Ga0265461_137422331	3300030743	Soil	RMYVSFLLFVIAIVLVVIFWELTKINHRLKTLLSQSKQDYEWAKKRAA
Ga0170834_1032938742	3300031057	Forest Soil	MVLPFLLFVIAVLLVSIFWELTKINKHLRTLLSQRKTDHDWAKKDAA
Ga0170824_1013580971	3300031231	Forest Soil	MALQFLLFVIAVLLISIFWELTKINKNFKTLITLRKADYGWAKNDAA
Ga0310686_1009399482	3300031708	Soil	AQFFLFVVAVLLISIFWELTKINHCLKTLLSQSKQDYEWAKKRAA
Ga0310686_1137401302	3300031708	Soil	AQFFLFVVAVLLISIFWELTKINHCLKTLLSQSKQDYEWAKKSAA
Ga0310686_1145441953	3300031708	Soil	MIVQFLLFVVAVLLVSIFWELTKINNRLKALLTPNKQDHDWAKRDA
Ga0310686_1148548162	3300031708	Soil	MMVQFLLFVIAVELFSIFWELTKMNYRLKMLLTQNKQDHEWAKKDAA
Ga0310686_1152170932	3300031708	Soil	MIAQFFLFVVAVLLISIFWELTKINHCLKTLLSQSKQDYEWAKK
Ga0307476_103577981	3300031715	Hardwood Forest Soil	MIAQFLLFVITVELFSIFWELTKMNHRLKTLLTQNKQDHEWAKKDAA
Ga0307474_1000017710	3300031718	Hardwood Forest Soil	MTVQFLLFVIAVLLVAIFWELTKINKRLKTLLTREKQESDWAKKDAA
Ga0307477_102834243	3300031753	Hardwood Forest Soil	VLLVSIFWELTKINHRLKTLLTQTKQGYDWAKKDAA
Ga0307475_106254041	3300031754	Hardwood Forest Soil	MIVQFLLFVIAVELFSIFWELTKMNYRLKTLLAQNKQDHEWAKKDAA
Ga0311301_129291011	3300032160	Peatlands Soil	MLSPMILQFLLFVIAVLLVSIFWELTKINKRLKTFVTPKKQDYDLAKKDAA
Ga0307471_1042819181	3300032180	Hardwood Forest Soil	MTAQFFLFVVAVLLISIFWELTKINHRLKTLLSQTKQDYEWAKKGAA
Ga0348332_128079881	3300032515	Plant Litter	EGQKMIAQFFLFVVAVLLISIFWELTKINHCLKTLLSQSKQDNEWAKKRAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094176

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences