Metagenome / Metatranscriptome Family F094175

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094175
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	81 residues
Representative Sequence	VIAWAIVMRLVGDHIHRVFLGFMPVSTVMTYGSAALLVVLIRWAKHGKPRGYLVAWIQHYFRPKAHNARCGAPTLPYLIEDEQ
Number of Associated Samples	84
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	47.62 %
% of genes near scaffold ends (potentially truncated)	56.60 %
% of genes from short scaffolds (< 2000 bps)	80.19 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.113 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (26.415 % of family members)
Environment Ontology (ENVO)	Unclassified (33.019 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.868 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.65% β-sheet: 0.00% Coil/Unstructured: 51.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF12846	AAA_10	0.94
PF03743	TrbI	0.94
PF01648	ACPS	0.94
PF04610	TrbL	0.94
PF12696	TraG-D_C	0.94
PF00872	Transposase_mut	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG2948	Type IV secretory pathway, VirB10 component	Intracellular trafficking, secretion, and vesicular transport [U]	0.94
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.94
COG3704	Type IV secretory pathway, VirB6 component	Intracellular trafficking, secretion, and vesicular transport [U]	0.94
COG3846	Type IV secretory pathway, TrbL components	Intracellular trafficking, secretion, and vesicular transport [U]	0.94

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.11 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.11 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.11 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	18.87 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.87 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.87 %
Unclassified	root	N/A	1.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002909\|JGI25388J43891_1006499	All Organisms → cellular organisms → Bacteria	2307	Open in IMG/M
3300005174\|Ga0066680_10192353	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300005177\|Ga0066690_10819891	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005178\|Ga0066688_10026800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3135	Open in IMG/M
3300005446\|Ga0066686_10595443	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300005451\|Ga0066681_10936447	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005529\|Ga0070741_10010582	All Organisms → cellular organisms → Bacteria	17356	Open in IMG/M
3300005529\|Ga0070741_11590306	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005531\|Ga0070738_10127722	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300005531\|Ga0070738_10344347	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300005557\|Ga0066704_10063983	All Organisms → cellular organisms → Bacteria	2353	Open in IMG/M
3300005561\|Ga0066699_10504306	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300005566\|Ga0066693_10093127	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300005574\|Ga0066694_10108183	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300005574\|Ga0066694_10425077	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300005575\|Ga0066702_10474580	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300006034\|Ga0066656_10255540	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300006176\|Ga0070765_100204284	All Organisms → cellular organisms → Bacteria	1794	Open in IMG/M
3300006794\|Ga0066658_10035110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2066	Open in IMG/M
3300006797\|Ga0066659_10020058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3806	Open in IMG/M
3300006797\|Ga0066659_10998630	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300006797\|Ga0066659_11032106	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300006797\|Ga0066659_11265889	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300006800\|Ga0066660_10758562	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300006804\|Ga0079221_11710953	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300009090\|Ga0099827_11393523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300009137\|Ga0066709_102017886	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300010335\|Ga0134063_10746486	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300010361\|Ga0126378_11335487	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300010361\|Ga0126378_12302506	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300010366\|Ga0126379_11966853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300010398\|Ga0126383_12922665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300012198\|Ga0137364_11098051	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300012198\|Ga0137364_11110590	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300012199\|Ga0137383_10038558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3387	Open in IMG/M
3300012199\|Ga0137383_10987995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300012199\|Ga0137383_11345639	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300012202\|Ga0137363_11819492	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300012203\|Ga0137399_10420865	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300012203\|Ga0137399_11633540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300012206\|Ga0137380_11642861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300012211\|Ga0137377_10516011	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300012211\|Ga0137377_11872509	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300012285\|Ga0137370_10092230	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300012285\|Ga0137370_10876824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300012357\|Ga0137384_10552142	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300012359\|Ga0137385_10018340	All Organisms → cellular organisms → Bacteria	6245	Open in IMG/M
3300012359\|Ga0137385_10398593	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300012359\|Ga0137385_10523606	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300012361\|Ga0137360_10324345	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300012362\|Ga0137361_10968352	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300012918\|Ga0137396_10328804	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300012923\|Ga0137359_10230362	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300012927\|Ga0137416_10480648	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300014487\|Ga0182000_10430003	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300016371\|Ga0182034_12026767	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300016404\|Ga0182037_10930196	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300016445\|Ga0182038_10861785	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300018088\|Ga0187771_10370309	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300018431\|Ga0066655_11455867	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300018468\|Ga0066662_11928980	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300018482\|Ga0066669_10079262	All Organisms → cellular organisms → Bacteria	2204	Open in IMG/M
3300020579\|Ga0210407_10063036	All Organisms → cellular organisms → Bacteria	2777	Open in IMG/M
3300020580\|Ga0210403_10068987	All Organisms → cellular organisms → Bacteria	2839	Open in IMG/M
3300020580\|Ga0210403_11242840	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300020581\|Ga0210399_10068348	All Organisms → cellular organisms → Bacteria	2874	Open in IMG/M
3300020582\|Ga0210395_11021909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300020583\|Ga0210401_10553313	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300021088\|Ga0210404_10362136	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300021088\|Ga0210404_10397110	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300021168\|Ga0210406_10154745	All Organisms → cellular organisms → Bacteria	1923	Open in IMG/M
3300021171\|Ga0210405_10050668	All Organisms → cellular organisms → Bacteria	3286	Open in IMG/M
3300021178\|Ga0210408_10828616	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300021403\|Ga0210397_11486339	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300021420\|Ga0210394_10002260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26908	Open in IMG/M
3300021432\|Ga0210384_10179685	All Organisms → cellular organisms → Bacteria	1902	Open in IMG/M
3300021479\|Ga0210410_10182319	All Organisms → cellular organisms → Bacteria	1878	Open in IMG/M
3300022528\|Ga0242669_1057647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300026317\|Ga0209154_1024525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2807	Open in IMG/M
3300026317\|Ga0209154_1096530	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300026324\|Ga0209470_1277151	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300026325\|Ga0209152_10008295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3669	Open in IMG/M
3300026325\|Ga0209152_10124430	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300026523\|Ga0209808_1100870	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300026529\|Ga0209806_1134540	Not Available	972	Open in IMG/M
3300026538\|Ga0209056_10378150	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300026542\|Ga0209805_1392783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300026551\|Ga0209648_10447063	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300027635\|Ga0209625_1107231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300027706\|Ga0209581_1002290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18713	Open in IMG/M
3300027706\|Ga0209581_1007294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7815	Open in IMG/M
3300027748\|Ga0209689_1083129	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300027965\|Ga0209062_1081240	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300027965\|Ga0209062_1128446	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300031720\|Ga0307469_10805937	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300031890\|Ga0306925_10926580	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300031962\|Ga0307479_11133278	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300032076\|Ga0306924_11915665	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300032180\|Ga0307471_100583584	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300032783\|Ga0335079_10178820	All Organisms → cellular organisms → Bacteria	2365	Open in IMG/M
3300032783\|Ga0335079_11152906	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300032892\|Ga0335081_10489251	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300032895\|Ga0335074_10012716	All Organisms → cellular organisms → Bacteria	11808	Open in IMG/M
3300032898\|Ga0335072_10426743	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300033134\|Ga0335073_10905819	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.60%
Loam	Environmental → Terrestrial → Soil → Loam	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	32.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	26.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.04%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25388J43891_10064992	3300002909	Grasslands Soil	VIAWAIIMRLLGDHIHRVFFGFVPVSTVMTYGSAALLVLLIRWAKHGKPRGYLVSWIQHYFRSKAHNARCGAPNVPYLIEDEQ*
Ga0066680_101923532	3300005174	Soil	GLELEDWGFAIAWAIILRLVGDHIHRVFFGFVPVSTVMTYGSAALLVLLIRWAKHGKPRGYLVSWIQHYFRSKAHNARCGAPNVPYLIEDEQ*
Ga0066690_108198911	3300005177	Soil	AIMMRLIGDQMHRVFLGVLPVSTVLAYGSSAVLVLALRWAKHGKPRGYLVAWIQQHFRPKDHCARLHKPQTAYLIEDEE*
Ga0066688_100268002	3300005178	Soil	VIAWAIVMRLIGDHINRVLLGFVPVSSVTTYGSAALLVALIRWAKHGKPRGYLVGSIQNYFQPKAHSVRCGAPEIPYLIEDER*
Ga0066686_105954432	3300005446	Soil	VRAEFLGLELEDWGFVIAWAIIMRLLGDHIHRVFFGFVPVSTVMTYGSAALLVLLIRWAKHGKPRGYLVSWIQHYFRSKAHNARCGAPNVPYLIEDEQ*
Ga0066681_109364472	3300005451	Soil	EDWGLVIAWAILMRLIGDHIHRVFLGFIPVSTVMTYGSAAVLVLLIRWAKHGKPRGYLVAWIQDHFRPKAHCARLNAQAQYLIEDEQ*
Ga0070741_1001058211	3300005529	Surface Soil	VIAWSIVMRLIGDHIHRVFLGFMPVSTVMTYGSAAFLIVIIRWAKHGKPRGYLVAWIQHYFRPKAHCARCSASDLPYLVEDEQ*
Ga0070741_115903061	3300005529	Surface Soil	FFGLELEDWGLVIAWAIVMRLIGDHIHRVFIGFMPVSTVMTYGSATVMVMLIRWAKHGKPRGYLVAWIQHHFRPKAHSARSDAPQAYLIEDEQ*
Ga0070738_101277221	3300005531	Surface Soil	VIAWAIIMRLIGDQIHRVFLGLLPVSTVLAYGSSALLVLAIRWAKHGKPRGYLAAWIQQHFRPKAHCARVREADMTHLVEDEE*
Ga0070738_103443472	3300005531	Surface Soil	VIAWAIVMRLIGDHIDRVFLGFMPVSTVMTYGSAALLVGLIRWAKHGKPRGYLVAWIQHYFRPKAHCARFGVSELPYLVEDEQ*
Ga0066704_100639832	3300005557	Soil	VLAWAIVMRLLGDNIHRVFLSFLPVSTVMTYGSAAILVVLIRWAKHGKPRGYMVAWIQHYFRPKGHSARCGAPEFPYLIEDER*
Ga0066699_105043062	3300005561	Soil	MRLIGDHIHRVFLGFLPVSTILAYGSSAVLVLLIRWAKHGKPHGYLVAWLRHQFRPKVYSARCGPPLPYLIEDEE*
Ga0066693_100931272	3300005566	Soil	EDWGLVIAWAIVVRLVGDHIHRVVLGFMPVSTVMTYGSAAILVLLIRWAKHGKPRGYLVAWIQHQFRPKAHCARLGAQVPYLIEDEQ*
Ga0066694_101081832	3300005574	Soil	VIAWAIILRLVGDHIHRVFFGVVPVSTVMTYGSAALLVLLIRWAKHGKPRGYLVSWIQHYFRSKGHNARCGAPNVSYLIEDEQ*
Ga0066694_104250771	3300005574	Soil	VIAWTILMRLIGDRIHRVFLGFLPLSTILACGSSAVLLLLIRWAKHGKPRGYLIAWIQHQFRPKAHSARWSDPQLSYLFEDEQ*
Ga0066702_104745802	3300005575	Soil	MRLIGDQIHRVFLGFLPVSTVLAYGSSAVLVLAIRWAKHGKPRGYLVAWIQQHFRPRAHCARLRGTQAPYLIEDQE*
Ga0066656_102555402	3300006034	Soil	DWGLVIAWAIVMRLIGDHIYRVILGFVPVSTVMTYGSAAILVLLIRWAKHGKPRGYLVAWIQHQFRPKAHCARLGAQVPYLIEDEQ*
Ga0070765_1002042843	3300006176	Soil	VIGWAIVMRLVGDHIHRVFLGFVPVSTVMSYGSAVLLVGLIRWAKHGKPRGYLVAWIQYYFRTKAHCAHCGSLEMPYLIEGEQ*
Ga0066658_100351102	3300006794	Soil	VIAWAIVMRLIGDHINRVLLGFVPVSSVTTYGSAALLVALIRWAKHGKPRGYLVASIQNYFQPKAHSVRCGAPEIPYLIEDER*
Ga0066659_100200583	3300006797	Soil	VIAWAIVMRLIGDHINRVLLGFVPVSSVTTYGSAALLVALIRWAKHGKPRGYLVASIQNYFKPKAHSVRCGAPEIPYLIEDER*
Ga0066659_109986301	3300006797	Soil	LRLVGDHIHRVFFGFVPVSTVMTYGSAALLVLLIRWAKHGKPRGYLVSWIQHYFRSKGHNARCGAPNVPYLIEDEQ*
Ga0066659_110321061	3300006797	Soil	IVMRLIGDHIHRVFLGFMPVSTVMTYGSAALLVGLIRWAKLGKPRGYLVAWIQHYFRPKAHCAHCGALEIPYLIEGEQ*
Ga0066659_112658892	3300006797	Soil	VIAWAIILRLVGDHIHRVFFGVVPVSTVMTYGSAALLVLLIRWAKHGKPRGYLVSWIQHYFRSKGHNARCGAPNMSYLIEDEQ*
Ga0066660_107585621	3300006800	Soil	IHRVFLGFLPVSTVLAYGSSAVLVLAIRWAKHGKPRGYLVAWIQQHFRPRAHCARLRGTQAPYLIEDQE*
Ga0079221_117109532	3300006804	Agricultural Soil	GLELEDWGFVIAWAIVMRLIGDHILRVFLGFMPVSTVMTYGSAALLVGLIRWAKHGKPRGYLVAWIQHYFRPKGHSARCGAPEFPYLIEDER*
Ga0099827_113935232	3300009090	Vadose Zone Soil	DWGFVIAWAIVMRLIGDHIHRVFLSLIPVSTVMTYGSAAVVVGLIRWAKHGKPRGYLVAWIQHYFRAKAHSARCGAPELCYLVEDEQ*
Ga0066709_1020178862	3300009137	Grasslands Soil	AWAIVMRLIGDHIHRVFLGFMPVSTVMTYGSAALLVGLIRWAKHDKPRGYLVAWIQHYFRPKAHCAHCGALEIPYLIEGEQ*
Ga0134063_107464861	3300010335	Grasslands Soil	LELEDWGLVIAWAILMRLIGDHIHRVFLGFLPVSTILAYGTSAVLVLLIRWAKHGKPRGYLVAWLQHQFRPKAHSARSNDPQLSYVIEDEQ*
Ga0126378_113354872	3300010361	Tropical Forest Soil	HRVFLGFVPVSTVVTYGSAALLVGLIRWAKLGKPRGYLVAWIQHYFRPKAHSAHCGSLEMPYLIEGEQ*
Ga0126378_123025061	3300010361	Tropical Forest Soil	AWAMVMRLIGDHIHRVVLGFVPVSTVMTYGSAGFLVLLIRWAKHGKPRGYLVAWLQHHFRPKAHCARLGAQPPYLIEDEQ*
Ga0126379_119668532	3300010366	Tropical Forest Soil	EDWGFVIAWAIVMRLVGDSIHRVFLGFLPVSTVMTYGSAALLVGLIRWAKHGKPRGYLVAWIQHYFRPKAHSAHCGSLEMPYLIEGEQ*
Ga0126383_129226651	3300010398	Tropical Forest Soil	LEDWGFVIAWAIVMRLVGDSIHRVFLGFLPVSTVMTYGSAALLVGLIRWAKHGKPRGYLVAWIQHYFRPKAHSAHCGSLEMPYLIEGEQ*
Ga0137364_110980512	3300012198	Vadose Zone Soil	VIAWAIVMRLIGDHIHRVLLGLVPVSTVMTYGTAAVLVLLIRWAKHGKPRGYLVAWIQHQFRPKAHSARAGNPALP
Ga0137364_111105902	3300012198	Vadose Zone Soil	VIAWTILMRLIGDHIHRVFLGFLPLSTILAYGSSAVLLLLIRWAKHGKPRGYLIAWIQHQFRPKAHSARWSDPQLSYLFEDKQ*
Ga0137383_100385585	3300012199	Vadose Zone Soil	MAWAIIMRLIGDQIHRVFLGLLPVSTVLAYGSSAVLVLAIRWAKHGKPRGYLVAWIQQHFRPKAHCARLRETDMPYLVEDEE*
Ga0137383_109879952	3300012199	Vadose Zone Soil	IGDHIHRVFLGFVPVSAGMTYGSTAVLVALIRWAKHGKPHGHLVAWIQHYFRPKAHSARCGAPELPYLSEGEQ*
Ga0137383_113456391	3300012199	Vadose Zone Soil	WGFVIAWAIIMRLIGDHIHRVFLGFVPVSTVMTYGSAALLVGLIRWAKHDKPRGYLVAWIQHYFRPKVHCARCGSLEMPYLIEGEQ*
Ga0137363_118194921	3300012202	Vadose Zone Soil	IAWAIVMRLVGDHIHRVFLGFVPVSTLMTYGSAALLVGLIRWTKHDKPRGYLVAWIQHYFRPKAHCAHCGSLEMPYLIEGEQ*
Ga0137399_104208652	3300012203	Vadose Zone Soil	DHIHRVFLGFMPVSTVMTYGSAALLVGLIRWAKHDKPRGYLVAWIQHYFRPKVHCARCGSLEMPYLIEGEQ*
Ga0137399_116335401	3300012203	Vadose Zone Soil	DHIHRVFLGFMPVSTVMTYGSAALLVGLIRWAKHDKPRGYLVAWIQHYFRPKAHCARCGVSEVPYLIEDER*
Ga0137380_116428612	3300012206	Vadose Zone Soil	HRVFLGFVPVSTVMTYGSATVLVLLIRWAKHGKPRGYLVAWIQHYFRPKAHSARCGVPDLPYVIEDEQ*
Ga0137377_105160112	3300012211	Vadose Zone Soil	MRLIGDHIHRVFLSLIPVSTVMTYGSAAVVVGLIRWAKHGKPRGYLVAWIQHYFRAKAHSARCGAPELSYLVEDEQ*
Ga0137377_118725091	3300012211	Vadose Zone Soil	VIAWAIIMRLIGDQIHRVFLGLLPVSTVLAYGSSAVLVLAIRWAKHGKPRGYLVAWIQQHFRPKAHCARLRETDMPYLVEDEE*
Ga0137370_100922302	3300012285	Vadose Zone Soil	LEDWGFVIAWAIVMRLIGDHIRRVFLGFMPVSTVMTYGWVAVLVLLIRWAKHSKPRGYLVAWIQHYFRRKAHSARCSAPELRYLIEDEQ*
Ga0137370_108768241	3300012285	Vadose Zone Soil	LGDHIHRVIFGFVPVSTVMTYGSAALLVLLIRWAKHGKPRGYLVSWIQHYFRSKAHNARCGAPNVPYLIEDEQ*
Ga0137384_105521421	3300012357	Vadose Zone Soil	WGFVIAWAIVMRLVGDHIHRVFLGFVPISTVMTYGSAALLVGLIRWAKLGKPRGYLVAWIQHYFRPKAHCAHCGSLEMPYLIEGEQ*
Ga0137385_100183402	3300012359	Vadose Zone Soil	LGLELEDWGFVIAWAIVMRLIGDNIHRVILSLIPVSTVMTYGSAALLVGLIRWAKHGKPRGYLVAWIQHYFRPKAHSAGCGAPELSYLIEDER*
Ga0137385_103985932	3300012359	Vadose Zone Soil	MRLIGDHIHRVFLGFLPLSTILAYGSSAVLLLLIRWAKHVKPRGYLIAWIQHQFRPKAHSARWSDPQLSYLFEDEQ*
Ga0137385_105236062	3300012359	Vadose Zone Soil	HIHRVFLGFLPVSTVMTYGSAALLVGLIRWAKHGKPRGYLVAWIQHYFRAKAHSARCGAPELSYLVEDEQ*
Ga0137360_103243452	3300012361	Vadose Zone Soil	VEFFGLELEDWGFVIAWAIVMRLIGDHIHRVFLSLIPVSTVMTYGSAAVVVGLIRWAKHGKPRGYLVAWIQHYFRAKAHSARCDAPELSYLVEDEQ*
Ga0137361_109683522	3300012362	Vadose Zone Soil	EFFGLELEDWGFVIAWAIVMRLIGDHIHRVFLSLIPVSTVMTYGSAAVVVGLIRWAKHGKPRGYLVAWIQHYFRAKAHSARCGAPELSYLVEDEQ*
Ga0137396_103288041	3300012918	Vadose Zone Soil	IHRVFLGFVPVSTVMTYGSAALLVGLIRWAKLGKPRGYLVAWIQHYFRPKAHCAHCGALEIPYLIEGEQ*
Ga0137359_102303622	3300012923	Vadose Zone Soil	VEFFGLELEDWGFVIAWAIVMRLIGDHIHRVFLSLIPVSTVMTYGSAAVVVGLIRWAKHGKPRGYLVAWIQHYFRAKAHSARCGAPELSYLVEDEQ*
Ga0137416_104806481	3300012927	Vadose Zone Soil	WGFVIAWAIVMRLIGDHIHRVFLGFMPVSTVMTYGSAALLVGLIRWAKLGKPRGYLVAWIQHYFRPKAHCAHCGSLEMPYLIEGEQ*
Ga0182000_104300031	3300014487	Soil	LIGDHIHRVVLGFVPVSTVMSYGTAAILVLLIRWAKHGKPRGYLVAWIQHQFRPKAHCARLGAQVPYLIEDEQ*
Ga0182034_120267672	3300016371	Soil	GFVIAWAIVMRLVGDHIHRVFLAFVPVSTVMTYGSAALLIGLIRWAKLGKPRGYLVAWLQHYFRAKAHCAHCGSLEMPYLIEDEQ
Ga0182037_109301962	3300016404	Soil	LEDWGFVIAWAIVMRLIGDHIHRVFLGFVPVSTVMTYCSAAVLVVVIRWAKHGKPRGYLVAWIQKYFRPKAHSARCGAPEVPYLVEGEQ
Ga0182038_108617851	3300016445	Soil	LEDWGFVIAWAIVMRLIGDHIHRVFLGFVPVSTVMTYCSAAVLVVVIRWAKHGKPRGYLVAWIQNYFRPKAHSARCGAPEVPYL
Ga0187771_103703092	3300018088	Tropical Peatland	VIAWAIVMRLIGDHIHRVFLGFLPVSTVMTYGSAAVLVLLIRWAKHGKPRGYLVAWIQHYFRPKAHSARCGAPELTYLVEDEQ
Ga0066655_114558671	3300018431	Grasslands Soil	VIAWAIIMRLLGDHIHRVFFGVVPVSTVMTYGSAALLVLLIRWAKHGKPRGYLVSWIQHYFRSKAHNARCGAPNVPYLIEDEQ
Ga0066662_119289801	3300018468	Grasslands Soil	HIYCVILGFVPVSTVMTYGSAAILVLLIRWAKHGKPRGYLVAWIQHQFRPKAHCARLGAQAPYLIEDEQ
Ga0066669_100792621	3300018482	Grasslands Soil	LRLVGDHIHRVFFGFVPVSTVMTYGSAALLVLLIRWAKHGKPRGYLVSWIQHYFRSKGHNARCGAPNVPYLIEDEQ
Ga0210407_100630362	3300020579	Soil	VIGWAIVMRLVGDHIHRVFLGFVPVSTVMTYGSAVLLVGLIRWAKHGKPRGYLVAWIQHHFRTKAHCAHCGSLEMPYLIEGEQ
Ga0210403_100689872	3300020580	Soil	VIGWAIVMRLVGDHIHRVFLGFVPVSTVMTYGSAVLLVGLIRWAKHGKPRGYLVAWVQHHFRTKAHCAHCGSLEMPYLIEGEQ
Ga0210403_112428401	3300020580	Soil	VIAWAILMRLLGDNIHRVFLSFVPVSTVMTYGSAAILVVLIRWAKHGKPRGYMVAWIQHYFRPKGHSACCGAPE
Ga0210399_100683482	3300020581	Soil	VIGWAIVMRLVGDHIHRVFLGFVPVSTVMTYGSAVLLVGLIRWAKHGKPRGYLVAWIQHYFRPKAHCAQCSSLEMPYLIEGEQ
Ga0210395_110219091	3300020582	Soil	HRVFLGFVPVSTVMSYGSAVLLVGLIRWAKHGKPRGYLVAWIQHYFRPKGHSACCDAPEFPYLIEDER
Ga0210401_105533131	3300020583	Soil	MRLVGDHIHRVFLGFVPVSTVMTYGSAVLLVGLIRWAKHGKPRGYLVAWIQHYFRPKAHCAQCSSLEMPYLIEGEQ
Ga0210404_103621361	3300021088	Soil	VIGWAIVMRLVGDHIHRVFLGFVPVSTVMTYGSAVLLVGLIRWAKHGKPRGYLVAWIQYYFRTKAHCAHC
Ga0210404_103971102	3300021088	Soil	RVFLGFVPVSTVMTYGSAVLLVGLIRWAKHGKPRGYLVAWIQHYFRPKAHCAHCGSLEMPYLIEGEQ
Ga0210406_101547453	3300021168	Soil	VIGWAIVMRLVGDHIHRVFLGFVPVSTVMTYGSAVLLVGLIRWAKHGKPRGYLVAWIQHYFRPKGHSACCDAPEFPYLIEDER
Ga0210405_100506681	3300021171	Soil	LEDWGLVIAWAIVMRLIGDHIHRVFLSFVPVSTVMTYGSAAILFLLIRWAKHGKPRGYMVAWIQRYFRPKGHCARCGAPEFPYLIEDER
Ga0210408_108286161	3300021178	Soil	VIGWAIVMRLVGDHIHRVFLGFVPVSTVMTYGSAVLLVGLIRWAKHGKPRGYLVAWVQHHFRTKAHCAHCGSLE
Ga0210397_114863392	3300021403	Soil	MRLIGDHIHRVFLSFVPVSTVMTYGSAAILFLLIRWAKHGKPRGYMVAWIQRYFRPKGHCARCGAPEFPYLIEDER
Ga0210394_100022607	3300021420	Soil	VIGWAIVMRLVGDHIHRVFLGFVPVSTVMTYGSAVLLVGLIRWAKHGKPRGYLVAWIQYYFRTKAHCAHCGSLEMPYLIEGEQ
Ga0210384_101796851	3300021432	Soil	HIHRVFLGFVPVSTVMTYGSAVLLVGLIRWAKHGKPRGYLVAWIQHYFRPKAHCAHCSSLEMPYLIEGEQ
Ga0210410_101823192	3300021479	Soil	VIGWAIVMRLVGDHIHRVFLGFVPVSTVMTYGSAVLVVGLVRWAKHGKPRGYLVAWIQHYFRTKAHCAHCGSLEMPYLIEGEQ
Ga0210409_112247521	3300021559	Soil	VPVSSVLAYGSSALLVLAIRWAKSGKPRGYLVAWIQQHFRPRAHRARVAASYPAYLLEDE
Ga0242669_10576472	3300022528	Soil	WGLVLAWAILMRLLGDNIHRVFLSFLPVSTVMTYGSAAILVVLIRWAKHGKPRGYMVAWIQHYFRPKGHSACCGAPEFPYLIEDER
Ga0209154_10245253	3300026317	Soil	VIAWAIVMRLIGDHINRVLLGFVPVSSVTTYGSAALLVAPIRWAKHGKPRGYLVASIQNYFQPKAHSVRCGAPEIPYLIEDER
Ga0209154_10965301	3300026317	Soil	VIAWAIIMRLLGDHIHRVFFGFVPVSTVMTYGSAALLVLLIRWAKHGKPRGYLVSWIQHYFRSKAHNARCGAPNVP
Ga0209470_12771512	3300026324	Soil	VIAWAIIMRLLGDHIHRVFFGFVPVSTVMTYGSAALLVLLIRWAKHGKPRGYLVSWIQHYFRSKAHNARCGAPNVPYLIEDEQ
Ga0209152_100082954	3300026325	Soil	VIAWAIVMRLIGDHINRVLLGFVPVSSVTTYGSAALLVALIRWAKHGKPRGYLVASIQNYFQPKAHSVRCGAPEIPYLIEDER
Ga0209152_101244302	3300026325	Soil	VIAWTILMRLIGDHIHRVFLGFLPLSTILAYGSSAVLLLLIRWAKHGKPRGYLIAWIQHQFRPKAHSARWSDPQLSYLFEDEQ
Ga0209808_11008702	3300026523	Soil	VIAWAIVMRLIGDHILRVFLGFMPVSTVMTYGSAALLVGLLRWAKHDKPRGYLVAWIQHYFRPKVHCARCGVSELPYLIEDER
Ga0209806_11345403	3300026529	Soil	RLLGDNIHRVFLSFVPVSTVMTYGAAAILVLLIRWAKHGKPRGYLVAWIQQHFRSKAHCAKLGETHTPYLIEEEE
Ga0209056_103781501	3300026538	Soil	IGDHIHRVFLGFVPVSTILAYGSSAVLVLLIRWAKHGKPRGYLIAWIQHRFRAKPHSARCRDSQLSYLIEDEQ
Ga0209805_13927831	3300026542	Soil	LEDWGFVIAWAIILRLLGDHIHRVFFGFVPVSTVMTYGSAALLVLLIRWAKHGKPRGYLVSWIQHYFRSKGHNARCGAPNVPYLIEDEQ
Ga0209648_104470632	3300026551	Grasslands Soil	WAIVMRLIGDHIHRVFLSLIPVSTVMTYGSAAVVVGLIRWAKHGKPRGYLVAWIQHYFRAKAHSARCGAPELSYLVEDEQ
Ga0209625_11072311	3300027635	Forest Soil	LVGDHIHRVFLGFVPVSTVMTYGSAVLLVGLIRWAKHGKPRGYLVAWIQYYFRTKAHCAHCGSLEMPYLIEGEQ
Ga0209581_100229013	3300027706	Surface Soil	VIAWAIVMRLIGDHIHRVFLGFVPVSTVMTYGSVALLVGLIRWAKHGKPRGYLVAWIQHYFRGKAHCARFGVSELPYLVEDEQ
Ga0209581_10072943	3300027706	Surface Soil	VIAWAIIMRLIGDQIHRVFLGLLPVSTVLAYGSSALLVLAIRWAKHGKPRGYLAAWIQQHFRPKAHCARVREADMTHLVEDEE
Ga0209689_10831292	3300027748	Soil	VIAWAIIMRLLGDHIHRVIFGFVPVSTVMTYGSAALLVLLIRWAKHGKPRGYLVSWIQHYFRSKGHNARCGAPNMSYLIEDEQ
Ga0209062_10812401	3300027965	Surface Soil	VIAWAIVMRLVGDHIHRVLLGFLPASAVMTYGSAAVLVVLIRWAKHGKPRGYLVAWIQHYFRPKAHCARCGDADAPYLIEDEP
Ga0209062_11284462	3300027965	Surface Soil	VIAWAIVMRLIGDHIHRVLLGFLPVSAAMTYGSAAVLVVLIRWAKHGKPRGYLVAWIQHYFRPKAHCARCGDTNA
Ga0307469_108059372	3300031720	Hardwood Forest Soil	VIGWAIVMRLVGDHIHRVFLGFVPVSTVMTYGSAVLLVGLIRWAKHGKPRGYLVAWIQHYFRPKAHCAHCGALEMPYLIEGEQ
Ga0306925_109265801	3300031890	Soil	IAWAIVMRLIGDHIHRVFLGFVPVSTVMTYCSAAVLVVVIRWAKHGKPRGYLVAWIQNYFRPKAHSARCGAPELPYLVEGEQ
Ga0307479_111332782	3300031962	Hardwood Forest Soil	VIAWAIILRLVGDHIHRVFFGFVPVSTVMTYGSAALLVLLIRWAKHGKPRGYLVSWIQHSFRSKGHNARCGAPNVPYLIEDEQ
Ga0306924_119156651	3300032076	Soil	LEDWGFVIAWAIVMRLIGDHIHRVFLGFVPVSTVMTYCSAAVLVVVIRWAKHGKPRGYLVAWIQNYFRPKAHS
Ga0307471_1005835842	3300032180	Hardwood Forest Soil	LELEDWGLAIAFAIIMRLMGDHIHRVFLGLVPVSSVLAYGSSALLVLAIRWVKHGKPRGYLVAWIQQHFRSKAHCAKLGETHAAYLVEEEE
Ga0335079_101788202	3300032783	Soil	VIAWAIVMRLIGDHIHRVFLGFVPVSTVMTYGSVALLVGLIRWAKHGKPRGYLVAWIQHYFRPKAHCARFGVSELPYLVEDEQ
Ga0335079_111529062	3300032783	Soil	LVIGWAIVMRLVGDHIHRVLLGFVPVSTVMTYGSALILVLLIRWAKHGKPRGYLVAWIQHYFRPKAHSARCGAPDLSYLIEDEQ
Ga0335081_104892512	3300032892	Soil	LEDWGFVIAWAIVMRLIGDHIHRVFVGFMPVSTLMTYGSAALLVVLIRWAKHGKPRGYLVAWIQHYFRPKAHNARCGAPTLPYLIEDEQ
Ga0335074_100127161	3300032895	Soil	VIAWAIVMRLVGDHIHRVFLGFMPVSTVMTYGSAALLVVLIRWAKHGKPRGYLVAWIQHYFRPKAHNARCGAPTLPYLIEDEQ
Ga0335072_104267432	3300032898	Soil	VIAWAIVMRLIGDHIHRVFVGFMPVSTLMTYGSAALLVVLIRWAKHGKPRGYLVAWIQHYFRPKAHNARCGAPTLSYLIEDEQ
Ga0335073_109058191	3300033134	Soil	VIAWAIVMRLIGDHIHRVFVGFMPVSTLMTYGSAALLVVLIRWAKHGKPRGYLVAWIQHYFRPKAHNARCGARTLPYLI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094175

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences