Basic Information | |
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Family ID | F094162 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 106 |
Average Sequence Length | 100 residues |
Representative Sequence | MLNRRSRLVLAFAVLTAGCGAALADDPPHKPSPPALDDELLEFLGSVDPSSDTVQPDDGSWIEYLSQTDIGKVAKPANPTVIAAKPATPAPKPSAPGAKQDE |
Number of Associated Samples | 84 |
Number of Associated Scaffolds | 106 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 87.74 % |
% of genes near scaffold ends (potentially truncated) | 25.47 % |
% of genes from short scaffolds (< 2000 bps) | 83.02 % |
Associated GOLD sequencing projects | 74 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.21 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (65.094 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.189 % of family members) |
Environment Ontology (ENVO) | Unclassified (34.906 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (48.113 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 28.46% β-sheet: 0.00% Coil/Unstructured: 71.54% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.21 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 106 Family Scaffolds |
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PF11304 | DUF3106 | 21.70 |
PF08281 | Sigma70_r4_2 | 18.87 |
PF00160 | Pro_isomerase | 4.72 |
PF03485 | Arg_tRNA_synt_N | 1.89 |
PF10099 | RskA | 0.94 |
PF02233 | PNTB | 0.94 |
PF02954 | HTH_8 | 0.94 |
PF05066 | HARE-HTH | 0.94 |
COG ID | Name | Functional Category | % Frequency in 106 Family Scaffolds |
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COG0652 | Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family | Posttranslational modification, protein turnover, chaperones [O] | 4.72 |
COG0018 | Arginyl-tRNA synthetase | Translation, ribosomal structure and biogenesis [J] | 1.89 |
COG1282 | NAD/NADP transhydrogenase beta subunit | Energy production and conversion [C] | 0.94 |
COG3343 | DNA-directed RNA polymerase, delta subunit | Transcription [K] | 0.94 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 65.09 % |
All Organisms | root | All Organisms | 34.91 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300004080|Ga0062385_10906294 | Not Available | 585 | Open in IMG/M |
3300005335|Ga0070666_10735805 | Not Available | 724 | Open in IMG/M |
3300005437|Ga0070710_11469151 | Not Available | 511 | Open in IMG/M |
3300005529|Ga0070741_10044713 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 5575 | Open in IMG/M |
3300005529|Ga0070741_10277675 | All Organisms → cellular organisms → Bacteria | 1582 | Open in IMG/M |
3300005538|Ga0070731_11166082 | Not Available | 509 | Open in IMG/M |
3300005548|Ga0070665_100108821 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 2774 | Open in IMG/M |
3300005563|Ga0068855_100003745 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 18574 | Open in IMG/M |
3300005602|Ga0070762_10064585 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 2046 | Open in IMG/M |
3300005614|Ga0068856_102441741 | Not Available | 530 | Open in IMG/M |
3300005842|Ga0068858_100411794 | All Organisms → cellular organisms → Bacteria | 1299 | Open in IMG/M |
3300005842|Ga0068858_100727083 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 966 | Open in IMG/M |
3300006176|Ga0070765_100790066 | Not Available | 897 | Open in IMG/M |
3300009093|Ga0105240_10022420 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales | 8371 | Open in IMG/M |
3300009093|Ga0105240_10040278 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales | 5977 | Open in IMG/M |
3300009545|Ga0105237_11940556 | Not Available | 597 | Open in IMG/M |
3300010371|Ga0134125_10409348 | Not Available | 1504 | Open in IMG/M |
3300010371|Ga0134125_10914502 | Not Available | 963 | Open in IMG/M |
3300010379|Ga0136449_100417900 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium | 2370 | Open in IMG/M |
3300010877|Ga0126356_10431839 | Not Available | 1341 | Open in IMG/M |
3300010880|Ga0126350_10721814 | Not Available | 816 | Open in IMG/M |
3300011120|Ga0150983_11917357 | Not Available | 603 | Open in IMG/M |
3300011120|Ga0150983_12967100 | All Organisms → cellular organisms → Bacteria | 1333 | Open in IMG/M |
3300011120|Ga0150983_15500310 | Not Available | 540 | Open in IMG/M |
3300012359|Ga0137385_10882436 | Not Available | 740 | Open in IMG/M |
3300012924|Ga0137413_10560645 | Not Available | 849 | Open in IMG/M |
3300012925|Ga0137419_11323950 | Not Available | 606 | Open in IMG/M |
3300013307|Ga0157372_10271248 | All Organisms → cellular organisms → Bacteria | 1972 | Open in IMG/M |
3300014325|Ga0163163_10353465 | All Organisms → cellular organisms → Bacteria | 1526 | Open in IMG/M |
3300014658|Ga0181519_10065807 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 2384 | Open in IMG/M |
3300018088|Ga0187771_10082148 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium | 2567 | Open in IMG/M |
3300019211|Ga0187799_1151230 | Not Available | 555 | Open in IMG/M |
3300019242|Ga0181502_1320239 | Not Available | 667 | Open in IMG/M |
3300019268|Ga0181514_1008974 | Not Available | 1459 | Open in IMG/M |
3300021086|Ga0179596_10025690 | All Organisms → cellular organisms → Bacteria | 2203 | Open in IMG/M |
3300021088|Ga0210404_10419677 | Not Available | 750 | Open in IMG/M |
3300021168|Ga0210406_10125926 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium | 2163 | Open in IMG/M |
3300021168|Ga0210406_10364371 | All Organisms → cellular organisms → Bacteria | 1164 | Open in IMG/M |
3300021170|Ga0210400_10484303 | Not Available | 1021 | Open in IMG/M |
3300021170|Ga0210400_10882524 | Not Available | 731 | Open in IMG/M |
3300021180|Ga0210396_10955694 | Not Available | 728 | Open in IMG/M |
3300021402|Ga0210385_10147142 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae | 1683 | Open in IMG/M |
3300021405|Ga0210387_11396258 | Not Available | 602 | Open in IMG/M |
3300021475|Ga0210392_10731071 | Not Available | 738 | Open in IMG/M |
3300022467|Ga0224712_10178613 | Not Available | 955 | Open in IMG/M |
3300022508|Ga0222728_1101069 | Not Available | 547 | Open in IMG/M |
3300022522|Ga0242659_1133906 | Not Available | 516 | Open in IMG/M |
3300022527|Ga0242664_1161475 | Not Available | 501 | Open in IMG/M |
3300022530|Ga0242658_1174690 | Not Available | 569 | Open in IMG/M |
3300022530|Ga0242658_1237712 | Not Available | 510 | Open in IMG/M |
3300022532|Ga0242655_10024711 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae | 1322 | Open in IMG/M |
3300022533|Ga0242662_10024439 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae | 1400 | Open in IMG/M |
3300022533|Ga0242662_10324718 | Not Available | 519 | Open in IMG/M |
3300022708|Ga0242670_1051613 | Not Available | 587 | Open in IMG/M |
3300022718|Ga0242675_1122597 | Not Available | 521 | Open in IMG/M |
3300022721|Ga0242666_1178139 | Not Available | 533 | Open in IMG/M |
3300022722|Ga0242657_1179328 | Not Available | 574 | Open in IMG/M |
3300022726|Ga0242654_10234124 | Not Available | 652 | Open in IMG/M |
3300025903|Ga0207680_10868584 | Not Available | 647 | Open in IMG/M |
3300025913|Ga0207695_10011495 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 10715 | Open in IMG/M |
3300025913|Ga0207695_10030125 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 5978 | Open in IMG/M |
3300025949|Ga0207667_10746087 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 979 | Open in IMG/M |
3300026035|Ga0207703_10174520 | All Organisms → cellular organisms → Bacteria | 1893 | Open in IMG/M |
3300027884|Ga0209275_10125725 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1338 | Open in IMG/M |
3300027908|Ga0209006_10144512 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 2090 | Open in IMG/M |
3300028379|Ga0268266_10035994 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 4211 | Open in IMG/M |
3300028381|Ga0268264_12241092 | Not Available | 554 | Open in IMG/M |
3300028536|Ga0137415_10524085 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 994 | Open in IMG/M |
3300029701|Ga0222748_1033003 | Not Available | 820 | Open in IMG/M |
3300029701|Ga0222748_1051267 | Not Available | 708 | Open in IMG/M |
3300030503|Ga0311370_11664631 | Not Available | 657 | Open in IMG/M |
3300030520|Ga0311372_10481294 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1833 | Open in IMG/M |
3300030521|Ga0307511_10260442 | Not Available | 823 | Open in IMG/M |
3300030730|Ga0307482_1020007 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae | 1379 | Open in IMG/M |
3300030730|Ga0307482_1093012 | Not Available | 813 | Open in IMG/M |
3300030730|Ga0307482_1150669 | Not Available | 678 | Open in IMG/M |
3300030738|Ga0265462_11889154 | Not Available | 576 | Open in IMG/M |
3300030743|Ga0265461_13678127 | Not Available | 520 | Open in IMG/M |
3300030841|Ga0075384_11497714 | Not Available | 748 | Open in IMG/M |
3300030855|Ga0075374_11458348 | Not Available | 711 | Open in IMG/M |
3300030906|Ga0302314_11869710 | Not Available | 521 | Open in IMG/M |
3300030923|Ga0138296_1707905 | Not Available | 509 | Open in IMG/M |
3300030937|Ga0138302_1440455 | Not Available | 652 | Open in IMG/M |
3300031047|Ga0073995_12199371 | Not Available | 644 | Open in IMG/M |
3300031057|Ga0170834_106278614 | Not Available | 612 | Open in IMG/M |
3300031128|Ga0170823_11304358 | Not Available | 666 | Open in IMG/M |
3300031128|Ga0170823_12001205 | Not Available | 628 | Open in IMG/M |
3300031231|Ga0170824_101355347 | Not Available | 561 | Open in IMG/M |
3300031446|Ga0170820_17456094 | Not Available | 594 | Open in IMG/M |
3300031474|Ga0170818_100706174 | Not Available | 594 | Open in IMG/M |
3300031708|Ga0310686_103472423 | Not Available | 618 | Open in IMG/M |
3300031708|Ga0310686_105298978 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1366 | Open in IMG/M |
3300031708|Ga0310686_109311228 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 9415 | Open in IMG/M |
3300031708|Ga0310686_110566552 | All Organisms → cellular organisms → Bacteria | 2224 | Open in IMG/M |
3300031708|Ga0310686_118892260 | Not Available | 776 | Open in IMG/M |
3300031715|Ga0307476_10319271 | Not Available | 1141 | Open in IMG/M |
3300031718|Ga0307474_11336068 | Not Available | 566 | Open in IMG/M |
3300031823|Ga0307478_10215008 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1551 | Open in IMG/M |
3300031823|Ga0307478_11000391 | Not Available | 699 | Open in IMG/M |
3300031962|Ga0307479_12135181 | Not Available | 507 | Open in IMG/M |
3300032160|Ga0311301_10402364 | Not Available | 2096 | Open in IMG/M |
3300032180|Ga0307471_101647728 | Not Available | 797 | Open in IMG/M |
3300032515|Ga0348332_10453495 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1373 | Open in IMG/M |
3300032515|Ga0348332_10813444 | Not Available | 745 | Open in IMG/M |
3300032515|Ga0348332_10881377 | Not Available | 720 | Open in IMG/M |
3300034268|Ga0372943_0207430 | All Organisms → cellular organisms → Bacteria | 1217 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 30.19% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 8.49% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 5.66% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.72% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 4.72% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 4.72% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 3.77% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 3.77% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 3.77% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 2.83% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 2.83% |
Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 2.83% |
Plant Litter | Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter | 2.83% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 2.83% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 1.89% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.89% |
Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 1.89% |
Boreal Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil | 1.89% |
Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 0.94% |
Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 0.94% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.94% |
Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland | 0.94% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.94% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 0.94% |
Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.94% |
Ectomycorrhiza | Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza | 0.94% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.94% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300004080 | Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Environmental | Open in IMG/M |
3300005529 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1 | Environmental | Open in IMG/M |
3300005538 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 | Environmental | Open in IMG/M |
3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Host-Associated | Open in IMG/M |
3300005602 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 | Environmental | Open in IMG/M |
3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
3300010379 | Sb_50d combined assembly | Environmental | Open in IMG/M |
3300010877 | Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300010880 | Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300011120 | Combined assembly of Microbial Forest Soil metaT | Environmental | Open in IMG/M |
3300012359 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG | Environmental | Open in IMG/M |
3300012924 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012925 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
3300014658 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG | Environmental | Open in IMG/M |
3300018088 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG | Environmental | Open in IMG/M |
3300019211 | Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300019242 | Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300019268 | Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300021086 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
3300021170 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M | Environmental | Open in IMG/M |
3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
3300021402 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O | Environmental | Open in IMG/M |
3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
3300021475 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O | Environmental | Open in IMG/M |
3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022508 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300022522 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022527 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022530 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022532 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022533 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022708 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022718 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022721 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022722 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022726 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300027884 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes) | Environmental | Open in IMG/M |
3300027908 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes) | Environmental | Open in IMG/M |
3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028536 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300029701 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030503 | III_Palsa_E3 coassembly | Environmental | Open in IMG/M |
3300030520 | III_Palsa_N2 coassembly | Environmental | Open in IMG/M |
3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Host-Associated | Open in IMG/M |
3300030730 | Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030738 | Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly | Environmental | Open in IMG/M |
3300030743 | Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly | Environmental | Open in IMG/M |
3300030841 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 EcM (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300030855 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300030906 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3 | Environmental | Open in IMG/M |
3300030923 | Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2) | Environmental | Open in IMG/M |
3300030937 | Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2) | Environmental | Open in IMG/M |
3300031047 | Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300031057 | Oak Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031128 | Oak Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031446 | Fir Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031474 | Fir Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
3300031715 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05 | Environmental | Open in IMG/M |
3300031718 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 | Environmental | Open in IMG/M |
3300031823 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 | Environmental | Open in IMG/M |
3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
3300032160 | Sb_50d combined assembly (MetaSPAdes) | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032515 | FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data) | Environmental | Open in IMG/M |
3300034268 | Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0062385_109062941 | 3300004080 | Bog Forest Soil | MLNRRPRLVLAFAVLTAGSAIAFADDPRKPTNPQSDDELLEFLGSVDPASDTVQPDDGAWIEYLSQTDIGKVAKPGNPTVVAAKPAAPAPKPSTPGAKQDE* |
Ga0070666_107358052 | 3300005335 | Switchgrass Rhizosphere | MVTRHSMLVLAFALLTAGSGVGLADDTHKPAAPDPATDEELLEFLGSVDNAADTAQPDDGTWIQYLSQTDIGKVAAKSSSPTVVAAKPAAAPEQKPSTPGAKQNE* |
Ga0070710_114691511 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | MLHRHSRWFLAVALLTAGAGVGWADDTHKPAAPATDEDLLEFLGSVDSAADSVQPDDGSWIDYLSQTDINRAAKPGNPTVVAAKPPGPAPKPNTPGAKNE* |
Ga0070741_100447132 | 3300005529 | Surface Soil | MLNRHSRWVLALAVWMAGSAVGWADDTHKPAAPANDDDLLEFLGSVDPASDSVQPDDGSWIDYLSQTDINRIARPGNPTVVAAKPPGPAPKPSTPGAKQDE* |
Ga0070741_102776753 | 3300005529 | Surface Soil | MFTWRPRVVLALAVLTAGSCVGLADDTRNKAADPALDDDLLEFLGSVDTASDATQPDDGTWIEYLSQTDIGKAAAKSPNPTVVAAKPAAPTTPPAPKSNASGAKQNE* |
Ga0070731_111660821 | 3300005538 | Surface Soil | RVGCGTTDADGGERRRDGYLMLHRHSRWVLAVALLTAGAGVGWADDTHKPAAPANDDDLLEFLGSVDSASDSVQPDDGSWIDYLSQTDINRAAKPGNPTVVAAKPPGPAPKPDTPGAKDE |
Ga0070665_1001088213 | 3300005548 | Switchgrass Rhizosphere | MVTRHSMQVLALALLTAGSGVGLADDTHKPAAPDPATDEELLEFLGSVDNAADTAQPDDGTWIQYLSQTDIGKVAAKSSSPTVVAAKPAAAPEQKPSTPGAKQNE* |
Ga0068855_10000374517 | 3300005563 | Corn Rhizosphere | MVTRHSMLVLAFALLTAGSGVGLADDAHKPAAPDPATDEELLEFLGSVDNAADTAQPDDGTWIQYLSQTDIGKVAAKSSNPTVVAAKPAAAPEQKPSTPGAKQNE* |
Ga0070762_100645854 | 3300005602 | Soil | MLNRRPRLVLAFAVLTAGSSMALADDSRKPTNPQSDDELLEFLGSVDPASDAAQPDDGSWIEYLSQTDIGKVAKPGNPTVVAAKPATPAPKPSAPGAKQDE* |
Ga0068856_1024417412 | 3300005614 | Corn Rhizosphere | MLKRRSRLLLAFAVLTAGAGIVLADDTRKPADPATDDELLEFLGSVDPASDTLQPDDGAWIEYLSQTDIGKVTAKPGNPTVIAARPPTPQQSPP |
Ga0068858_1004117943 | 3300005842 | Switchgrass Rhizosphere | MSWRWHFRLALAFAALTAGCGVGLADDAPKPADPVLDDDLLEFLGSVDPASDTEQPDDGTWIEYLSQTDIGKVAKSGNPTVVAAKPATPAPQPSASGAKQDE* |
Ga0068858_1007270833 | 3300005842 | Switchgrass Rhizosphere | MLNRCVRLGLVVASLALGAGIGRADDPHNAAEPALDDELLEFLGSVDPASDSTSSDDGTWIEYLSQTDIGKVVKPAS |
Ga0070765_1007900661 | 3300006176 | Soil | ERNLMLNRRPRLVLAFAVLTAGSSMALADDSRKPTNPQSDDELLEFLGSVDPASDAVQPDDGSWIEYLSQTDIGKVAKPGNPTVVAAKPATPAPKPSAPGAKQDE* |
Ga0105240_100224206 | 3300009093 | Corn Rhizosphere | MLNPHSRWVLALAVWMAGSAVGWADDTHKPAAPANDDDDLLEFLGSVDPASDSQPDDGSWIDYLSQTDINRIAKPGNPTVVAAKPPASAPKPSTPGAKQDE* |
Ga0105240_100402786 | 3300009093 | Corn Rhizosphere | MLGRRFQLLLVFTALTASAGVGFADDTRKPADPALDDDLLEFLGSVDPTSDTAQPDDGTWIEYLSQTDIGKVAKPDKPTVVAARPAPPQQPEKPSTPGAKQNE* |
Ga0105237_119405561 | 3300009545 | Corn Rhizosphere | MLALAVLMAGSGVVLADDTRKPADPASDDELLEFLGSVDPASDSVQPDDGTWIDYLSQTDIGKVAKQGNPTVVAARPVTPPSPPPTSSA |
Ga0134125_104093483 | 3300010371 | Terrestrial Soil | MVTRHSMLVLALALLTAGSGVGLADDTHKPAAPDPATDEELLEFLGSVDNAADTAQPDDGTWIQYLSQTDIGKVAAKSSNPTVVAAKPAAAPEQKPSTPGAKQNE* |
Ga0134125_109145022 | 3300010371 | Terrestrial Soil | MLYRHSRWVLAVALLTAGAGVGWADDTHKPAAPASDDDLLEFLGSVDSAADSVQPDDGSWIDYLSQTDVNKAAKPGNPTVIAAKPPGPAPKPTTPGTKQDE* |
Ga0136449_1004179002 | 3300010379 | Peatlands Soil | MLNRCSRLVLAFAVLTAGSSAVLADDPPRKPSPPALDDELLEFLGSVDPSSDTVQADDGSWIEYLSQTDIGKVAKPANPTVIAAKPATPAPKPSAPGAKQNE* |
Ga0126356_104318392 | 3300010877 | Boreal Forest Soil | MLSRRSRLMLAFAVLTAGSGAVLADDPLRKPSPPALDDELLEFLGSVDPSSDTVQPDDGSWIEYLSQTDIGKVAKPANPTVIAAKPATPAPKPSAPGAKQNE* |
Ga0126350_107218142 | 3300010880 | Boreal Forest Soil | MLNRRSRLVVAFAVLTVGCSGALLADDPPHKPSPPALDDELLEFLGSVDPSSDTVQADDGSWIEYLSQTDIGKVAKPGNPTVIAAKPATPAPKPSAPGAKQDE* |
Ga0150983_119173572 | 3300011120 | Forest Soil | MWNRHARWVLAVALFTAGAGVGWADDAPHKPAAPANDDDLLGFLGSVDTASDSARPDDGSWMDYLSQADINRVAKPANPVVIAAKPPVSAPKPPSPGAKQDE* |
Ga0150983_129671003 | 3300011120 | Forest Soil | MLAVALLTAGAGVGWADDTHKPAAPANDEDLLEFLGGVDSASDSVQPDDGSWIDYLSQTDINRAAKPGNPTVIAAKPPGPAPKPNTPGAKQDE* |
Ga0150983_155003102 | 3300011120 | Forest Soil | MLNRHSRWVLALALLTAGSAVGWADDTHKPAAPANDDDLLEFLGSVDPASDSVQPDDGSWIDYLSQTDINRVAKPGNPTVVAAKPPGPAPKPSTPGAKQDE* |
Ga0137385_108824361 | 3300012359 | Vadose Zone Soil | HLMLNRHSRLVLAFAVLTAGSSAVLADDPPHKPSPPALDDELLEFLGSVDPSSDTVQADDGSWIEYLSQTDIGKVAKPGNPTVIAAKPATPAPKPSAPGAKQDE* |
Ga0137413_105606453 | 3300012924 | Vadose Zone Soil | MWDRRLRLLLAFATLIAGSAIALADDKRKAADPALDDELLEFLGSVDPPSESVQPDDGTWIDYLSQTDIGKVAKNPTVAGAKPVVPAPKPSAPGGKE* |
Ga0137419_113239502 | 3300012925 | Vadose Zone Soil | MLNRHSRLVLAFAVLTAGSGAVLADDPPHKPSPPALDDELLEFLGSVDPSSDTVQADDGSWIEYLSQTDIGKVAKPANPTVIAAKPATPAPKPSAPGAKQDE* |
Ga0157372_102712483 | 3300013307 | Corn Rhizosphere | MVTRHSMLVLALALLTAGSGVGLADDAHKPAAPDPATDEELLEFLGSVDNAADTAQPDDGTWIQYLSQTDIGKVAAKSSNPTVVAAKPAAAPEQKPSTPGAKQNE* |
Ga0163163_103534653 | 3300014325 | Switchgrass Rhizosphere | MTRRHFRLALALAALTAGCGIGLADDARKPADPVLDDDLLEFLGSVDPASDTEQPDDGTWIEYLSQTDIGKVAKPGNPTVVAAKPTTPVPQPSASGAKQNE* |
Ga0181519_100658074 | 3300014658 | Bog | CWVLALAVLTAGSGTGWADDARKPAAPADDDLLGFLGSVDSASESGQPDDGSWIDYLSQTDINRVAKPGNPNVVASKPPGPAPKPSTPGAKQDE* |
Ga0187771_100821482 | 3300018088 | Tropical Peatland | MRNRRSRLVLAFTVLAAGSSAGFADDTRKPASPTPDDELLEFLGSVDPASDTVHPDDGSWVEYLSQTDIGKVAKPGNPTVVAAKPATPAPKPSTPGAKQDE |
Ga0187799_11512302 | 3300019211 | Peatland | MRNRRSRLVLAFTVLAAGSSAGFADDTRKPASPTPDDELLEFLGSVDPASDTVHPDDGSWVEYLSQTDIGKVAKPGNPTVVAAKPATPTPKPSTPGAKQDE |
Ga0181502_13202392 | 3300019242 | Peatland | MLNRHSCWVLALAVLSAGSGTGWADDARKPAAPANDEDLLEFLGSVDSPSDSGQPDDGSWIDYLSQTDINRVAKPGNPSVVAAKPPVPAPKPGTPGAKQDE |
Ga0181514_10089742 | 3300019268 | Peatland | MLNRHSRWVLAFALLTAGSAVGWADDTRKPAAPANDDDLLEFLGSVDPASDAVQPDDGSWIDYLSQTDINRVAKPGNPTVVAAKPPGPAPKPTTPGAKQDE |
Ga0179596_100256903 | 3300021086 | Vadose Zone Soil | MLNRRSRLVLAFAVLTAGSGAVLAGDPPHKPNPPALDDELLEFLGSVDPSSDTVQADDGSWIEYLSQTDIGKVAKPGNPTVIAAKPATPAPKPSAPGAKQDE |
Ga0210404_104196771 | 3300021088 | Soil | MLNRRSRLVLAFALLSAGSGVAFAEDPGKPTDPVLDDELLEFLGSVDPSLDKVQPDDGSWIEFLSETDVGQVTKPGNPTVIAAKPAAPAPKPSTPGAKQNE |
Ga0210406_101259262 | 3300021168 | Soil | MLNRRSRLVLAFAVLTAGCGAALADDPPHKPSPPALDDELLEFLGSVDPSSDTVQPDDGSWIEFLSQTDIGKVAKPANPTVIAAKPATPAPKPSAPGAKQDE |
Ga0210406_103643713 | 3300021168 | Soil | MLHRHSRWMLAVALLTAGAGVGWADDTHKPAAPANDEDLLEFLGSVDSASDSVQPDDGSWIDYLSQTDINRAAKPGNPTVIAAKPPGPAPKPNTPGAKQDE |
Ga0210400_104843032 | 3300021170 | Soil | MLNRRSRLVLAFAVLTAGSGAVLADDPPHQPSPPALDDELLEFLGSVDPSSDTVEADDGSWIEYLSQTDIGKVAKPGNPTVIAAKPATPAPKPSAPGAKQDE |
Ga0210400_108825242 | 3300021170 | Soil | MLNRRSRLVLAFALLSAGSGVAFAEDPGKPTDPVLDDELLEFLGSVDPSLDKAQPDDGSWIEFLSETDVGQVTKPGNPTVIAAKPAAPAPKPSTPGAKQNE |
Ga0210396_109556941 | 3300021180 | Soil | MLNRRPRLVLAFAVLTAGSAFALADDARKPTNPQSDDELLEFLGSVDPASDTVQPDDGAWIEYLSQTDIGKVAKPGNPTVVAAKPATPAPKPSTPGAKQDE |
Ga0210385_101471422 | 3300021402 | Soil | MLNRRPRLVLAFAVLTAGSAFALADDARKPTNPQSDDELLEFLGSVDPASDTVQPDDGAWIEYLSQTDIGKVAKPGNPTVVAAKPATPAPKPSAPGAKQDE |
Ga0210387_113962581 | 3300021405 | Soil | LMLNRRPRLVLAFAVLTAGSAFALADDARKPTNPQSDDELLEFLGSVDPASDTVQPDDGAWIEYLSQTDIGKVAKPGNPTVVAAKPATPAPKPSTPGAKQDE |
Ga0210392_107310711 | 3300021475 | Soil | MLNRHSCWVLALVVLTAGSGTGWADDVHKPAAPSNDDDLLEFLGSVDSPSDSGQPDDGSWIDYLSQTDINRAAKPGNPTVIAAKPPGPAPKPNTPGAKQDE |
Ga0224712_101786132 | 3300022467 | Corn, Switchgrass And Miscanthus Rhizosphere | MVTRHSMLVLAFALLTAGSGVGLADDAHKPAAPDPATDEELLEFLGSVDNAADTAQPDDGTWIQYLSQTDIGKVAAKSSNPTVVAAKPAAAPEQKPSTPGAKQNE |
Ga0222728_11010691 | 3300022508 | Soil | MLHRHSRWMLAVALLTAGAGVGWADDTHKPAAPANDDDLLEFLGSVDSASDSVQPDDGSWIDYLSQTDINRAAKPGNPTVIAAKPPGPAPKPNTPGAKQDE |
Ga0242659_11339062 | 3300022522 | Soil | MWNRHSRLVLAFTVLAAGSGAGFADDTRKPASPTPDDELLEFLGSVDPASDTVHPDDGSWVEYLSQTDIGKVAKPGNPTVVAAKPPTPPPKQSTPGAKQDE |
Ga0242664_11614752 | 3300022527 | Soil | MSSRHFCWVLAVALLTAGSGVGWADDAHKPAAPANDDDLLGFLGSVDTASDPKRPDDGSWMDYLSQTDINRVAKPGNPTVIAAKPPGPAPKPNTPGAKQDE |
Ga0242658_11746902 | 3300022530 | Soil | MLNRRPRLVLAFAVLTAGSSMALADDSRKPTNPQSDDELLEFLGSVDPASDTVQPDDGAWIEYLSQTDIGKVAKPGNPTVVAEKPATPAPKPSTPGAKQDE |
Ga0242658_12377122 | 3300022530 | Soil | LVVLTAGSGTGWADDVHKPAAPSNDDDLLEFLGSVDSPSDSGQPDDGSWIDYLSQTDINRVAKPGNPSVVASKPPGPAPKPSTPGAK |
Ga0242655_100247113 | 3300022532 | Soil | MLNRRSRLVLAFAVLTAGSGAVLADDPPHQPSPPALDDELLEFLGSVDPSSDTVQADDGSWIEYLSQTDIGKVAKPGNPTVIAAKPATPTPKPSAPGAKQDE |
Ga0242662_100244393 | 3300022533 | Soil | MLNRRSRLVLAFAVLTAGSGAVLADDPPHQPSPPALDDELLEFLGSVDPSSDTVEADDGSWIEYLSQTDIGKVAKPANPTVIAAKPATPAPKPSAPGAKQDE |
Ga0242662_103247181 | 3300022533 | Soil | MLHRHSRWMLAVALLTAGAGVGWADDTHKPAAPANDDDLLEFLGSVDSASDSVQPDDGSWIDYLSQTDINRAAKPGNPTVIAAKPPGPAPKSNTPGAKQDE |
Ga0242670_10516132 | 3300022708 | Soil | MLNRRSRLVLAFAVLTAGCGAALADDPPHKPSPPALDDELLEFLGSVDPSSDTVQPDDGSWIEYLSQTDIGKVAKPANPTVIAAKPATPAPKPSAPGAKQDE |
Ga0242675_11225971 | 3300022718 | Soil | MLHRHSRWVLAVALLTAGAGVGWADDTHKPAAPANDEDLLEFLGGVDSASDSVQPDDGSWIDYLSQTDINRAAKPGNPTVIAAKPPGPAPKPNTPGAKQDE |
Ga0242666_11781392 | 3300022721 | Soil | MWNRHSRFVLAFAVLAAGSGAGFADDARKSASPTPDDDLLEFLGSVDPASDTVHPDDGSWVEYLSQTDIGKVAKPGNPTVVAAKPPTPAPKPSTPGAKQDE |
Ga0242657_11793282 | 3300022722 | Soil | MLHRHSRWVLAVALLTAGAGVGWADDSHKPAAPANDEDLLEFLGSVDSASDSVQPDDGSWIDYLSQADINRAAKPGNPTVIAAKPPGPAPKPNTPGAKQDE |
Ga0242654_102341242 | 3300022726 | Soil | MLNRRSRLVLAFAVLTAGCGAALADDPPHKPSPPALDDELLEFLGSVDPSSDTVQPDDGSWIEFLSQTDFGKVAKPANPTVIAAKPATPAPKPSAPGAKQDE |
Ga0207680_108685842 | 3300025903 | Switchgrass Rhizosphere | TAGSGVGLADDTHKPAAPDPATDEELLEFLGSVDNAADTAQPDDGTWIQYLSQTDIGKVAAKSSSPTVVAAKPAAAPEQKPSTPGAKQNE |
Ga0207695_100114955 | 3300025913 | Corn Rhizosphere | MLNPHSRWVLALAVWMAGSAVGWADDTHKPAAPANDDDDLLEFLGSVDPASDSQPDDGSWIDYLSQTDINRIAKPGNPTVVAAKPPASAPKPSTPGAKQDE |
Ga0207695_100301254 | 3300025913 | Corn Rhizosphere | MLGRRFQLLLVFTALTASAGVGFADDTRKPADPALDDDLLEFLGSVDPTSDTAQPDDGTWIEYLSQTDIGKVAKPDKPTVVAARPAPPQQPEKPSTPGAKQNE |
Ga0207667_107460873 | 3300025949 | Corn Rhizosphere | MLKRRSRLLLAFAVLTAGAGIVLADDTRKPADPALDDELLEFLGSVDPASDTVQPDDGTWIEYLSQTDIGKVAAKPGNPTVVAA |
Ga0207703_101745201 | 3300026035 | Switchgrass Rhizosphere | WRWHFRLALAFAALTAGCGVGLADDAPKPADPVLDDDLLEFLGSVDPASDTEQPDDGTWIEYLSQTDIGKVAKSGNPTVVAAKPATPAPQPSASGAKQDE |
Ga0209275_101257252 | 3300027884 | Soil | MLNRRPRLVLAFAVLTAGSSMALADDSRKPTNPQSDDELLEFLGSVDPASDAAQPDDGSWIEYLSQTDIGKVAKPGNPTVVAAKPATPAPKPSAPGAKQDE |
Ga0209006_101445123 | 3300027908 | Forest Soil | MLSRRPRLVLAFAVLTAGSAFALADDARKPTNPQSDDELLEFLGSVDPASDTVQPDDGAWIEYLSQTDIGKVAKPGNPTVVAAKPATPAPKPSTPGAKQDE |
Ga0268266_100359943 | 3300028379 | Switchgrass Rhizosphere | MVTRHSMQVLALALLTAGSGVGLADDTHKPAAPDPATDEELLEFLGSVDNAADTAQPDDGTWIQYLSQTDIGKVAAKSSSPTVVAAKPAAAPEQKPSTPGAKQNE |
Ga0268264_122410922 | 3300028381 | Switchgrass Rhizosphere | MSWRWHFRLALAFAALTAGCGVGLADDAPKPADPVLDDDLLEFLGSVDPASDTEQPDDGTWIEYLSQTDIGKVAKSGNPTVVAAKPATPAPQPSASGAKQ |
Ga0137415_105240853 | 3300028536 | Vadose Zone Soil | MLDRRRHLLLAFAVLTAGSTIALADDNRKAADPALEDELLEFLGSVDPPSESVQPDDGTWIDYLSQTDIGKVVKSPTVAEAKPVVPAPKPSAPGV |
Ga0222748_10330032 | 3300029701 | Soil | MLHRHSRWMLAVALLTAGAGVGWADDSHKPAAPANDEDLLEFLGSVDSASDSVQPDDGSWIDYLSQTDINRAAKPGNPTVIAAKPPGPAPKPNTPGAKQDE |
Ga0222748_10512672 | 3300029701 | Soil | MLNRRPRLVLAFAVLTAGSAFALADDARKPTNPQSDDELLEFLGSVDPASDAVQPDDGSWIEYLSQTDIGKVAKPANPTVIAAKPATPAPKPSAPGAKQDE |
Ga0311370_116646312 | 3300030503 | Palsa | MLNRRSRLVLAFTVLTAGSSFALADDSRKPTNPQSDDELLEFIGSVDPASDTVQPDDGSWIEYLSQTDIGRVANKPGNPTVVAAKPATPAPKPSSPGAKQDE |
Ga0311372_104812944 | 3300030520 | Palsa | MLNRRPRLVLAFAVLTAGSAMALADDARKPTNPKSDDELLEFLGSVDPASDAVQPDDGSWIEYLSQTDIGKVAKPGNPTVVAAKPATPAPKPSAPGAKQDE |
Ga0307511_102604422 | 3300030521 | Ectomycorrhiza | MLNRCSRLVLAFAVLTAASGAVLADDPPRKPSPPALDDELLEFLGSVDPSSDTVQADDGSWIEYLSQTDIGKVAKPANPTVIAAKPATPAPKPSAPGAKQNE |
Ga0307482_10200073 | 3300030730 | Hardwood Forest Soil | MLNRCSRLVLAFAVLTAGSGAVLADDPPRKPSPPALDDELLEFLGSVDPSSDTVQADVGSWIEYLSQTDIGKVAKPGNPTVVAEKPATPAPKPSTPGAKQDE |
Ga0307482_10930122 | 3300030730 | Hardwood Forest Soil | MLHRHSRWMLAVALLTAGAGVGWADDTHKPAAPANDEDLLEFLGGVDSASDSVQPDDGSWIDYLSQTDINRAAKPGNPTVIAAKPPGPAPKPNTPGAKQDE |
Ga0307482_11506691 | 3300030730 | Hardwood Forest Soil | MWNRHSRFVLAFAVLVASSGAGFADDTRKPASPTTPDDELLEFLGSVDPASDTVHPDDGSWVEYLSQTDIGKVAKPGNPTVVAAKPPTPAPKPSTPGAKQNE |
Ga0265462_118891541 | 3300030738 | Soil | MLNRLSHWALALVMLTVGPGVGWADDTQKKPAAPALDDDILEFLGSVDPASDTVQPDDGAWIEYLSQTDIGKVANKPGNPTVVAAKPATPAPKPSTPGAKQDE |
Ga0265461_136781271 | 3300030743 | Soil | MLNRHSRWVLAFALLTAGSAVGWADDTRKPAAPASDDDLLEFLGSVDPASDAVQPDDGSWIDYLSQTDINRVAKPGNPTVVAAKPPGPAPNPTTPGAKQDE |
Ga0075384_114977142 | 3300030841 | Soil | MLHRHSRWVLAVALLTAGAGVGWADDSHKPAAPANDEDLLEFLGSVDSASDSVQPDDGSWIDYLSQTDINRAAKPGNPTVIAAKPPGPAPKPNTPGAKQDE |
Ga0075374_114583482 | 3300030855 | Soil | MLHRHSRWMLAVALLTAGAGVGWADDSHKPAAPANDEDLLEFLGSVDSASDSVQPDDGSWIDYLSQTDINRAAKPGNPTVIAAKPPGPAPK |
Ga0302314_118697102 | 3300030906 | Palsa | MLNRRPRLVLAFAVLTAGSAMALADDARKPTNPKSDDELLEFLGSVDPASDAVQPDDGSWIEYLSQTDIGKVAKPGNPTVVAA |
Ga0138296_17079051 | 3300030923 | Soil | MLSRRSRLVLAFAVLTAGSGAVLADDPPHKPSPPALDDELLEFLGSVDPSSDTVQPDDGSWIEYLSQTDIGKVAKPANPTVIAAKPATPAPKPSAPGA |
Ga0138302_14404552 | 3300030937 | Soil | MLSRRSRLVLAFAVLTAGCGAALADDPPHKPSPPALDDELLEFLGSVDPSSDTVQPDDGSWIEYLSQTDIGKVAKPANPTVIAAKPATPAPKPSAPGAKQDE |
Ga0073995_121993712 | 3300031047 | Soil | MLNRCSRLVLAFAVLTAGSGAVLADDPPRKPSPPALDDELLEFLGSVDPSSDTVQADDGSWIEYLSQTDIGRVAKPGNPTVIAAKPATPAPKPSAPGAKQDE |
Ga0170834_1062786142 | 3300031057 | Forest Soil | MLNRRSRLVLAFAVLTAGSGAVFADDPPRKPSPPALDDELLEFLGSVDPSSDTVQADDGSWIEYLSQTDIGKVAKPANPTVIAAKPATPAPKPSAPGAKQNE |
Ga0170823_113043582 | 3300031128 | Forest Soil | MLNRRPRLVLAFAVLTAGSAIALADDARKPTNPQSDDELLEFLGSVDPASDTVQPDDGAWIEYLSQTDIGKVAKPGNPTVVAAKPATPAPKPST |
Ga0170823_120012051 | 3300031128 | Forest Soil | LVVLTAGSGTGWADDVHKPAAPSNDDDLLEFLGSVDSPSDSGQPDDGSWIDYLSQNDINRVAKPGNPNVVASKPPGPAPKPSTPGAKQDE |
Ga0170824_1013553472 | 3300031231 | Forest Soil | MLNRHSCWVLALVVLTAGSGTGWADDVHKPAAPSNDDDLLEFLGSVDSPSDSGQPDDGSWIDYLSQTDINRVAKPGNPNVVASKPPGPAPKPSTPGAKQDE |
Ga0170820_174560942 | 3300031446 | Forest Soil | MLNRCSRLVLAFAVLTTGAGAVLADDPPRKPSPPALDDELLEFLGSVDPSSDTVQADDGSWIEYLSQTDIGKVAKPANPTVIAAKPATPAPKPSAPGAKQDE |
Ga0170818_1007061742 | 3300031474 | Forest Soil | MLNRCSRLVLAFAVLTAGCGAVLADDPPRKPSPPALDDELLEFLGSVDPTSDTVQPDDGSWIEYLSQTDIGKVAKPANPTVIAAKPATPAPKPSAPGAKQNE |
Ga0310686_1034724232 | 3300031708 | Soil | MLDRRSRLVLAFAVLTAGSSFALADDSRKPTNPQSDDELLEFLGSVDPASDMVQPDDGSWIEYLSQTDIGKVANKPGNPTVIAAKPATRAPKPSSPGAKQDE |
Ga0310686_1052989783 | 3300031708 | Soil | MSNRCARLVLAFAVLTAGSGVGLADDTTRKPPNPSSDDELLEFLGSVDPASDTVQPDDGTWIEYLSQTDIGKVAKPGNPTVVAAKPAAPAPKPGTPGAKQDE |
Ga0310686_1093112284 | 3300031708 | Soil | MSNRRSRFVLAFAVLTAGSAIALADDSRKPTNPQSDDELLEFLGSVDPASDTVQSDDGSWIEYLSQTDIGKVANKPGNPTVVAAKPAAPAPKPSTPGAKQDE |
Ga0310686_1105665521 | 3300031708 | Soil | RDGYLMLNRHSRWVLAFALLTAGSAVGWADDTRKPAAPASDDDLLEFLGSVDPASDAVQPDDGSWIDYLSQTDINRVAKPGNPTVVAAKPPGPAPKPTTPGAKQDE |
Ga0310686_1188922602 | 3300031708 | Soil | MLNRRPRLVLAFAVLTAGSAIALADDPRKPTNPQSDDELLEFLGSVDPASDAVQPDDGSWIEYLSQTDIGKVAKPGNPTVVAAKPATPAPKPSAPGAKQDE |
Ga0307476_103192712 | 3300031715 | Hardwood Forest Soil | MWHRHSRLVLAFTVLAAGSSAGFADDTRKPASPTPDDELLEFLGSVDPASDAVHPDDGSWVEYLSQTDIGKVAKPGNPTVVAAKPPTPAPKPSTPGAKQDE |
Ga0307474_113360682 | 3300031718 | Hardwood Forest Soil | MLNRCSRLVLAFAVLTAGSGAVFADDPPRKPSPPALDDELLEFLGSVDPSSDTVQADDGSWIEYLSQTDIGKVAKPGNPTVIAAKPATPAPKPSAPGA |
Ga0307478_102150081 | 3300031823 | Hardwood Forest Soil | GGGRRRERNLMLNRRPRLVLAFAVLTAGSAFALADDARKPTNPQSDDELLEFLGSVDPASDTVQPDDGAWIEYLSQTDIGKVAKPGNPTVVAEKPATPAPKPSTPGAKQDE |
Ga0307478_110003912 | 3300031823 | Hardwood Forest Soil | MWNRHSRLVLAFTVLAAGSGSGFADDARKPASQTPDDDLLEFLGSVDPASDTAHPDDGSWVEYLSQTDIGKVAKPGNPTVVAAKPPTPAPKPSTPGAKQDE |
Ga0307479_121351811 | 3300031962 | Hardwood Forest Soil | MWNRHSRFVLAFAVFAAGSGAGFADDTRKPASPTPDDELLEFLGSVDPASDTAHPDDGSWVEYLSQTDIGKVAKPGNPTVVAVKPPT |
Ga0311301_104023644 | 3300032160 | Peatlands Soil | MLNRCSRLVLAFAVLTAGSSAVLADDPPRKPSPPALDDELLEFLGSVDPSSDTVQADDGSWIEYLSQTDIGKVAKPANPTVIAAKPATPAPKPSAPGAKQNE |
Ga0307471_1016477282 | 3300032180 | Hardwood Forest Soil | MLNRRSRLVLAFAVLTAGAGAVLADDPPHKPSPPALDDELLEFLGSVDPTSDTVQADDGSWIEYLSQTDIGKVAKPANPTVIAAKPATPAPKPSAPGAKQDE |
Ga0348332_104534951 | 3300032515 | Plant Litter | MLNRHSRWVLAFALLTAGSAVGWADDTRKPAAPASDDDLLEFLGSVDPASDAVQPDDGSWIDYLSQTDINRVAKPGNPTVVAAKPPGPAPKPTTPGAKQDE |
Ga0348332_108134442 | 3300032515 | Plant Litter | MLNRRPRLVLAFAVLTAGSAIALADDARKPTNPQSDDELLEFLGSVDPASDTVQPDDGAWIEYLSQTDIGKVAKPGNPTVVAAKPATPAPKPSTPGAKQDE |
Ga0348332_108813772 | 3300032515 | Plant Litter | MWNRHSRLVLAFTVLAAGSGAGFADDTRKPASPAPDDELLEFLGSVDPASDTVHPDDGSWVEYLSQTDIGKVAKPGNPTVVAAKPPTPAPKPSTPGAKQDE |
Ga0372943_0207430_17_355 | 3300034268 | Soil | MQTRRSRLVLAFALLMAVSGVALADDPHKPAAPDPAIDDELLEFLGSVDNAADTAQPDDGTWIDYLSHTDLGSHTDPGKVAAKPDNPTVIAAKPATPPAEQKPSTSGEKQNE |
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