Metagenome / Metatranscriptome Family F094127

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094127
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	145 residues
Representative Sequence	FLAQPRGLYAQVYLRRNFTIDDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICETR
Number of Associated Samples	95
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.95 %
% of genes near scaffold ends (potentially truncated)	94.34 %
% of genes from short scaffolds (< 2000 bps)	95.28 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.151 % of family members)
Environment Ontology (ENVO)	Unclassified (47.170 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.264 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 29.70% Coil/Unstructured: 70.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF03190	Thioredox_DsbH	2.83
PF07221	GlcNAc_2-epim	2.83

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1331	Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains	General function prediction only [R]	2.83
COG2942	Mannose or cellobiose epimerase, N-acyl-D-glucosamine 2-epimerase family	Carbohydrate transport and metabolism [G]	2.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.94 %
Unclassified	root	N/A	49.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.00 %
Unclassified	root	N/A	49.06 %
Viruses	superkingdom	All Organisms → Viruses	0.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.00 %
Unclassified	root	N/A	49.06 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.45 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.94 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8.49 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.89 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.94 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.94 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.55 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.94 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.94 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.94 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.94 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	0.94 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.94 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.94 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.94 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.94 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Derxia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Derxia	0.94 %
Aminobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter	0.94 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	0.94 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.94 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.94 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.94 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	0.94 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Derxia gummosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Derxia → Derxia gummosa	0.94 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	0.94 %
Corndogvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Corndogvirus	0.94 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.94 %
Aminobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter	0.94 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.94 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	0.94 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Nocardiopsis halophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis halophila	0.94 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	0.94 %
unclassified Corndogvirus	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Corndogvirus → unclassified Corndogvirus	0.94 %
Derxia gummosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Derxia → Derxia gummosa	0.94 %
Aminobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter	0.94 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.94 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	0.94 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Anaeromyxobacter dehalogenans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	0.94 %
Mycobacterium phage Dylan	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Corndogvirus → unclassified Corndogvirus → Mycobacterium phage Dylan	0.94 %
Nocardiopsis halophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis halophila	0.94 %
Derxia gummosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Derxia → Derxia gummosa	0.94 %
Aminobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter	0.94 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.94 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	0.94 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908007\|FWIRElOz_GKZ9IRQ02GCE83	Not Available	518	Open in IMG/M
3300001305\|C688J14111_10092961	All Organisms → cellular organisms → Bacteria → Proteobacteria	917	Open in IMG/M
3300002568\|C688J35102_118257499	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	543	Open in IMG/M
3300002568\|C688J35102_120418963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1054	Open in IMG/M
3300004156\|Ga0062589_100135537	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300004157\|Ga0062590_100144912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1614	Open in IMG/M
3300004463\|Ga0063356_103336203	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300004479\|Ga0062595_100660085	Not Available	830	Open in IMG/M
3300004479\|Ga0062595_102246143	Not Available	536	Open in IMG/M
3300004480\|Ga0062592_102508664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300004778\|Ga0062383_10531540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	591	Open in IMG/M
3300005093\|Ga0062594_101736176	Not Available	654	Open in IMG/M
3300005175\|Ga0066673_10661068	Not Available	604	Open in IMG/M
3300005178\|Ga0066688_10809694	Not Available	585	Open in IMG/M
3300005330\|Ga0070690_101216050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	601	Open in IMG/M
3300005339\|Ga0070660_101713924	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005364\|Ga0070673_101710923	Not Available	595	Open in IMG/M
3300005365\|Ga0070688_101625982	Not Available	528	Open in IMG/M
3300005366\|Ga0070659_101394620	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300005438\|Ga0070701_10288798	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300005459\|Ga0068867_100449785	All Organisms → cellular organisms → Bacteria → Proteobacteria	1097	Open in IMG/M
3300005515\|Ga0077122_10768207	Not Available	567	Open in IMG/M
3300005549\|Ga0070704_101731661	Not Available	578	Open in IMG/M
3300005566\|Ga0066693_10227073	All Organisms → cellular organisms → Bacteria → Proteobacteria	734	Open in IMG/M
3300005615\|Ga0070702_101461443	Not Available	561	Open in IMG/M
3300005719\|Ga0068861_100544175	All Organisms → cellular organisms → Bacteria → Proteobacteria	1057	Open in IMG/M
3300005719\|Ga0068861_101821597	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M
3300005719\|Ga0068861_101898618	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005840\|Ga0068870_10537794	All Organisms → cellular organisms → Bacteria → Proteobacteria	785	Open in IMG/M
3300005842\|Ga0068858_100473043	All Organisms → cellular organisms → Bacteria → Proteobacteria	1209	Open in IMG/M
3300005842\|Ga0068858_101383697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	693	Open in IMG/M
3300005843\|Ga0068860_102641358	Not Available	521	Open in IMG/M
3300006028\|Ga0070717_10758703	All Organisms → cellular organisms → Bacteria → Proteobacteria	882	Open in IMG/M
3300006047\|Ga0075024_100179928	All Organisms → cellular organisms → Bacteria → Proteobacteria	980	Open in IMG/M
3300006177\|Ga0075362_10425289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	672	Open in IMG/M
3300006186\|Ga0075369_10606874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Derxia → Derxia gummosa	524	Open in IMG/M
3300006195\|Ga0075366_10964074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis halophila	532	Open in IMG/M
3300006237\|Ga0097621_101422291	Not Available	657	Open in IMG/M
3300006237\|Ga0097621_101439823	Not Available	653	Open in IMG/M
3300006237\|Ga0097621_102284153	Not Available	518	Open in IMG/M
3300006881\|Ga0068865_100879234	Not Available	778	Open in IMG/M
3300006881\|Ga0068865_101602721	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Corndogvirus → unclassified Corndogvirus → Mycobacterium phage Dylan	585	Open in IMG/M
3300009098\|Ga0105245_12425346	All Organisms → cellular organisms → Bacteria → Proteobacteria	578	Open in IMG/M
3300009148\|Ga0105243_12982076	Not Available	513	Open in IMG/M
3300009176\|Ga0105242_10695184	All Organisms → cellular organisms → Bacteria → Proteobacteria	994	Open in IMG/M
3300009177\|Ga0105248_11420136	All Organisms → cellular organisms → Bacteria → Proteobacteria	785	Open in IMG/M
3300009551\|Ga0105238_12196987	Not Available	587	Open in IMG/M
3300009553\|Ga0105249_13334554	Not Available	517	Open in IMG/M
3300009553\|Ga0105249_13360171	Not Available	515	Open in IMG/M
3300010335\|Ga0134063_10411281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	665	Open in IMG/M
3300010375\|Ga0105239_13472534	Not Available	512	Open in IMG/M
3300010400\|Ga0134122_11771058	Not Available	648	Open in IMG/M
3300010880\|Ga0126350_10648736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	824	Open in IMG/M
3300012582\|Ga0137358_10359828	All Organisms → cellular organisms → Bacteria → Proteobacteria	985	Open in IMG/M
3300012898\|Ga0157293_10331708	Not Available	514	Open in IMG/M
3300012902\|Ga0157291_10256276	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300012906\|Ga0157295_10212241	Not Available	625	Open in IMG/M
3300012910\|Ga0157308_10365851	Not Available	549	Open in IMG/M
3300012924\|Ga0137413_11567232	Not Available	537	Open in IMG/M
3300012951\|Ga0164300_10657905	Not Available	628	Open in IMG/M
3300012987\|Ga0164307_10054884	All Organisms → cellular organisms → Bacteria → Proteobacteria	2307	Open in IMG/M
3300013308\|Ga0157375_11416337	Not Available	819	Open in IMG/M
3300014497\|Ga0182008_10212864	All Organisms → cellular organisms → Bacteria → Proteobacteria	987	Open in IMG/M
3300014745\|Ga0157377_10994019	Not Available	635	Open in IMG/M
3300014969\|Ga0157376_11075073	Not Available	829	Open in IMG/M
3300014969\|Ga0157376_11504201	All Organisms → cellular organisms → Bacteria → Proteobacteria	706	Open in IMG/M
3300015195\|Ga0167658_1094752	All Organisms → cellular organisms → Bacteria → Proteobacteria	649	Open in IMG/M
3300015201\|Ga0173478_10749659	Not Available	529	Open in IMG/M
3300015374\|Ga0132255_100807521	All Organisms → cellular organisms → Bacteria → Proteobacteria	1399	Open in IMG/M
3300018469\|Ga0190270_10860538	All Organisms → cellular organisms → Bacteria → Proteobacteria	920	Open in IMG/M
3300018476\|Ga0190274_13340388	Not Available	541	Open in IMG/M
3300018481\|Ga0190271_11261039	Not Available	860	Open in IMG/M
3300018920\|Ga0190273_12163399	Not Available	521	Open in IMG/M
3300022756\|Ga0222622_11418007	Not Available	511	Open in IMG/M
3300023102\|Ga0247754_1001066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4569	Open in IMG/M
3300024347\|Ga0179591_1145673	All Organisms → cellular organisms → Bacteria → Proteobacteria	2070	Open in IMG/M
3300025315\|Ga0207697_10183175	All Organisms → cellular organisms → Bacteria → Proteobacteria	918	Open in IMG/M
3300025899\|Ga0207642_10411453	All Organisms → cellular organisms → Bacteria → Proteobacteria	811	Open in IMG/M
3300025912\|Ga0207707_10376902	All Organisms → cellular organisms → Bacteria → Proteobacteria	1220	Open in IMG/M
3300025938\|Ga0207704_11641616	Not Available	552	Open in IMG/M
3300025942\|Ga0207689_11185544	Not Available	643	Open in IMG/M
3300025945\|Ga0207679_11311471	Not Available	664	Open in IMG/M
3300025960\|Ga0207651_11561633	Not Available	594	Open in IMG/M
3300025961\|Ga0207712_11707562	Not Available	564	Open in IMG/M
3300026023\|Ga0207677_10850604	All Organisms → cellular organisms → Bacteria → Proteobacteria	820	Open in IMG/M
3300026035\|Ga0207703_10101486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter	2440	Open in IMG/M
3300026041\|Ga0207639_10707318	All Organisms → cellular organisms → Bacteria → Proteobacteria	935	Open in IMG/M
3300026088\|Ga0207641_12110820	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300026089\|Ga0207648_11158319	Not Available	726	Open in IMG/M
3300026095\|Ga0207676_11812784	Not Available	609	Open in IMG/M
3300026118\|Ga0207675_102401258	Not Available	539	Open in IMG/M
3300026118\|Ga0207675_102465941	Not Available	531	Open in IMG/M
3300028381\|Ga0268264_12219879	All Organisms → cellular organisms → Bacteria → Proteobacteria	557	Open in IMG/M
3300028708\|Ga0307295_10115332	All Organisms → cellular organisms → Bacteria → Proteobacteria	731	Open in IMG/M
3300028885\|Ga0307304_10588527	Not Available	515	Open in IMG/M
3300031242\|Ga0265329_10274255	Not Available	566	Open in IMG/M
3300031446\|Ga0170820_10274597	Not Available	526	Open in IMG/M
3300031716\|Ga0310813_11542248	Not Available	619	Open in IMG/M
3300031858\|Ga0310892_11358574	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300031943\|Ga0310885_10540074	All Organisms → cellular organisms → Bacteria → Proteobacteria	640	Open in IMG/M
3300031996\|Ga0308176_12537665	Not Available	546	Open in IMG/M
3300032144\|Ga0315910_11140150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	609	Open in IMG/M
3300032174\|Ga0307470_11694118	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300033004\|Ga0335084_11270784	Not Available	734	Open in IMG/M
3300033489\|Ga0299912_10393066	Not Available	1139	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	50.00%
Host-Associated	Host-Associated	50.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.00%
Terrestrial	Environmental → Terrestrial	47.17%
Aquatic	Environmental → Aquatic	2.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.81%
Roots	Host-Associated → Plants → Roots	6.60%
Sediment	Environmental → Aquatic → Sediment	1.89%
Freshwater	Environmental → Aquatic → Freshwater	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	22.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.15%
Loam	Environmental → Terrestrial → Soil → Loam	10.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.66%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.94%
Endophytes	Host-Associated → Plants → Roots → Endophytes	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	22.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.15%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.66%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.77%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.83%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.94%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Roots → Endophytes → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.15%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	11.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	8.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.83%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.89%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.94%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.94%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Arabidopsis Root	Host-Associated → Plants → Roots → Endophytes → Unclassified → Arabidopsis Root	0.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.94%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908007	Soil microbial communities from sample at FACE Site Metagenome WIR_ElevOz2	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005515	Combined assembly of arab plate scrape MF_Cvi (Combined Assembly)	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006186	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031242	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIRElOz_10090480	2124908007	Soil	AQPRGLYAQVYLRRNFTIEDPAKRTRFQCAAFHLTRDGAKPQDGYLCVTSWNNKFVKLRLTTLSDNNTETSARKFVADWIPVLWGGGATTSRAEQPREPVRAAPRAQAQNPAPPVRRPAVRRRPACPENYICEYR
C688J14111_100929611	3300001305	Soil	DLKRAAIPDDAKSAIVKAEFERARADAFLAQPRGLYAQVYLRRNFTIDDTSKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFIKLRLTTLADNNTETAARKFVAAWVPVLWGGGGASSRAEQVREPVQAEPRSQSRPQARPRPPQVHRARPRFKCPEGYICEVR*
C688J35102_1182574991	3300002568	Soil	AKSAIVRAEFERVRADAFLAQPRGVYAQVYLRRNFTIDDSAKRTRFQCSAFHLTRDGAKPQDGYLCVTSWNNKFVKLRFTTLADSNTEAAARQYVAAWIPVLWGPGGTARAEQARPEPKPRAESPRAQAHRAHALRPVHRPAPPRRPVARRPACPQGYICEYR*
C688J35102_1204189632	3300002568	Soil	GDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARADAFLAQPRGLYAQVYLRRNFTIDDTSKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFIKLRLTTLADNNTETAARKFVAAWVPVLWGGGGASSRAEQVREPVRAEPQSQSRPRARPRPPQVHRARPRFKCPEGYICEVR*
Ga0062589_1001355371	3300004156	Soil	RRNFTIDDGAKRTRFQCAAFHLTRDGAKPQDGYLCVTSWNNKFVKLRLTTLADNNTEAAARKFVNAWIPVLWGGGSRAEQAKPEPKARAQGRPEARPHRAAPAHRPAPPRRRFRCPENYICETR*
Ga0062590_1001449121	3300004157	Soil	DYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTDAFLAQPRGIYAQVYLRRNFTIDDGAKRTRFQCAAFHLTRDGAKPQDGYLCVTSWNNKFVKLRLTTLADNNTEAAARKFVNAWIPVLWGGGSRAEQAKPEPKARAQGRPEARPHRAAPAHRPAPPRRRFRCPENYICETR*
Ga0063356_1033362031	3300004463	Arabidopsis Thaliana Rhizosphere	LTRDGAKPQDGYLCVTSWNNKFVKLRLTTLADNNTEAAARKFVNAWIPVLWGGGSRAEQAKPEPKARAQGRPEARPHRAAPAHRPAPPRRRFRCPENYICETR*
Ga0062595_1006600852	3300004479	Soil	LDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICETR*
Ga0062595_1022461431	3300004479	Soil	YDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDAAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDTNTETTARKYVSAWVPVLWGGGGGISRAEQVREPARPEARRQVRARPHQVHRAPARQRFKCPEGYICEAR*
Ga0062592_1025086642	3300004480	Soil	RRNFTIDDGAKRTRFQCAAFHLTRDGAKPQDGYLCVTSWNNKFVKLRLTTLADNNTEAAARKFVNAWIPVLWGGGSRAEQAKPEPKARAQARPEARPHRAAPAHRPAPPRRRFRCPENYICETR*
Ga0062383_105315401	3300004778	Wetland Sediment	EDAGKRTRFQCSAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDTNTEASARKFVTAWIPVLWGGGVSRAEQSRPEQVRPEPRSAPVAQPRAAAEPRAHAPRRPPVRRQPACPEGYICEYR*
Ga0062594_1017361761	3300005093	Soil	GYGLDYSQSGWKLDVFIYDLKRAAIPEDAKSAIVRAEFERVRADAFLAQPRGLYAQVYLRRNFTIDDAAKRTRFQCAAFHLTRDGAKPQDGYLCVTSWNNKFVKLRFTTLAENNTEASARKYVAAWIPVFWGPGGSTRAEQVRPEPKPRAESPRTRSPRAQGLRPVHRPAPPRRPVARRPACPEGYICEYR*
Ga0066673_106610681	3300005175	Soil	AEFERARAEAFLAQPRGLYAQVYLRRNFTIDDAAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRVRARPQQVHRAPARPRFKCPEGYICEVR*
Ga0066688_108096941	3300005178	Soil	AIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIEDAAKRTRFQCAAFHLARDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWMPVLWGGGGTSRAEQVREPVRPEPRPQVQQRPQQVHRAPARPRFKCPEGYICEVR*
Ga0070690_1012160501	3300005330	Switchgrass Rhizosphere	QPRGIYAQVYLRRNFTIDDAAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDSNTEATARKFVNAWIPVLWGAGGTARAEQAKPEPKPQARSQARAQAHPHAAPSAQRPAPRRPKFKCPENYICETR*
Ga0070660_1017139241	3300005339	Corn Rhizosphere	KRTRFQCAAFHLTRDGAKPQDGFLCVTAWNNKFVKLRLTTLSDNNTEASARKFVTAWIPVLWGGGSRAEQAKPEPKARAQGRPEARPHRAAPAHRPAPPRRRFRCPENYICETR*
Ga0070673_1017109231	3300005364	Switchgrass Rhizosphere	QSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICETR*
Ga0070688_1016259821	3300005365	Switchgrass Rhizosphere	IYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTVDDAAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGISRAEQVREPVRSEPRPQVRARPRQVHRAPARPRFKCPEGYICEAR*
Ga0070659_1013946202	3300005366	Corn Rhizosphere	YAQVYLRRNFTIDDGAKRTRFQCAAFHLTRDGAKPQDGYLCVTSWNNKFVKLRLTTLADNNTEAAARKFVNAWIPVLWGGGSRAEQAKPEPKARAQGRPEARPHRAAPAHRPAPPRRRFRCPENYICETR*
Ga0070701_102887982	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VRAEFERARTDAFLAQPRGIYAQVYLRRNFTIDDGAKRTRFQCAAFHLTRDGAKPQDGYLCVTSWNNKFVKLRLTTLADNNTEAAARKFVNAWIPVLWGGGSRAEQAKPEPKARAQGRPEARPHRAAPAHRPAPPRRRFRCPENYICETR*
Ga0068867_1004497851	3300005459	Miscanthus Rhizosphere	PDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICETR*
Ga0077122_107682071	3300005515	Arabidopsis Root	AIVRAEFERARADTFFAQPRGIYAQVYLKRNFTIEDSAKRTRFQCAAFHLTRDGAKPQDGYLCVTSWNNKFVKFRLTTLADSTTEAAARNYVNAWVPVLWGSGSKVEVEKPKVKKSAAARLGRAPRRAQ*
Ga0070704_1017316611	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICETR*
Ga0066693_102270732	3300005566	Soil	WKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDAAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDTGTETTARKYVSAWVPVLWGGGGGGVSRAEQVREPVRPEPHPQVRARPRQVHRVPARPRFKCPEGYICEVR*
Ga0070702_1014614431	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	IPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICETR*
Ga0068861_1005441751	3300005719	Switchgrass Rhizosphere	DSAKRTRFQCAAFHLTRDGAKPQDGYLCVTSWNNKFVKLRLTTLSDTNTEAPARKFVSAWVPVLWGAGGTSRAEQVKPEPQPRAESRAQQRAQAPRRPAVRRAPACPQGYICEYR*
Ga0068861_1018215972	3300005719	Switchgrass Rhizosphere	AAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTEATARKYVAAWVPVLWGGGGAVSSRAEQVREPIRPESRPQAQPRPRQVHRAPVRPRFKCPEGYICETR*
Ga0068861_1018986182	3300005719	Switchgrass Rhizosphere	YLRRNFTIEDSAKRTRFQCAAFHLTRDGAKPQDGYLCVTSWNNKFVKLRLTTLADSNTEAAARNHVLAWVPVLWGSGSRTADEKPEAKKPAARGQAVHHAPPARPARPTVRRAPRCPEGYICEQR*
Ga0068870_105377942	3300005840	Miscanthus Rhizosphere	AAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGISRAEQVREPVRSEPRPQVRARPRQVHRAPARPRFKCPEGYICEAR*
Ga0068858_1004730431	3300005842	Switchgrass Rhizosphere	VYLRRNFTIDDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICETR*
Ga0068858_1013836971	3300005842	Switchgrass Rhizosphere	SGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGIYAQVYLRRNFTVDDVAGRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDTSTEASARKYISAWVPVLWGAGGAGISRAEQVREPVRPEPRSQVRARPHQVHRAPVRPRFKCPEGYICEVR*
Ga0068860_1026413581	3300005843	Switchgrass Rhizosphere	QPRGIYAQVYLRRNFTVDDVAGRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDASTEASARKYVSAWVPVLWGAGGAGISRAEQVREPVRPEPRPQVRARPHQVHRAPVRPRFKCPEGYICEVR*
Ga0070717_107587031	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	FLAQPRGLYAQVYLRRNFTIEDAAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGTSRAEQVREPVRPEPRPQARPQAQPRPQQVHRAPVRPRFKCPEGYICEVR*
Ga0075024_1001799281	3300006047	Watersheds	SGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARADAFLAQPRGLYAQVYLRRNFTIDDAAKRTRFQCAAFHLTRDGAKPQDGYLCVTAWNNKFVKLRLTTLSDNNTETSARKFVNAWIPVLWGGGAYRAEQGKPEPKAEARPLPQAHPAPRRPVVRRQPACPPGFICEYR*
Ga0075362_104252892	3300006177	Populus Endosphere	AQPRGLYAQVYLRRNFTVEDAAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGVSRAEQIREPVRPEPRPRAEPRRRPQQVHRAPARPRFKCPEGYICEVR*
Ga0075369_106068741	3300006186	Populus Endosphere	ADTFLAQPRGIYAQVYLRRNFTIEDSAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLADSNTEAAARSHVLAWVPVLWGSGSRANDDKPEAKKKPAARGQAAHAPPARAARPPVRRAPRCPEGYICR*
Ga0075366_109640741	3300006195	Populus Endosphere	IYDLKRAAIPDDAKSAIVRAEFERARADAFLAQPRGIYAQVYLRRNFTIEDSGKRTRFQCATFHMTRDGAKPQDGFLCVTSWNNKFVKLRLATLADANTEADARKFVAAWIPVLWGGGSRVVEEKPAKPEPERRSGRRAQSEPRAQQQRAEPARPQPRPRPVIRRPRCPEGYICEY
Ga0097621_1014222912	3300006237	Miscanthus Rhizosphere	RARADAFMAQPRGLYAQVYLRRNFTIDDAAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTEATARKYVAAWVPVLWGGGGAASSRAEQVREPARPEPQTQARPRPRQVHRAPARPRFKCPEGYICETR*
Ga0097621_1014398231	3300006237	Miscanthus Rhizosphere	AKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDSNTEATARKFVIAWIPVLWGAGGTARAEQAKPEPKPQARSQARAQAHPHAAPSAQRPAPRRPKFKCPENYICETR*
Ga0097621_1022841531	3300006237	Miscanthus Rhizosphere	GDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPR
Ga0068865_1008792342	3300006881	Miscanthus Rhizosphere	PDDAKSAIVRAEFERARTDAFLAQPRGIYAQVYLRRNFTIDDGAKRTRFQCAAFHLTRDGAKPQDGYLCVTSWNNKFVKLRLTTLADNNTEAAARKFVNAWIPVLWGGGSRAEQAKPEPKARAQARPEARPHRAAPAHRPAPPRRRFRCPENYICETR*
Ga0068865_1016027211	3300006881	Miscanthus Rhizosphere	AAIPEDAKSAIVRAEFERVRADAFLAQPRGLYAQVYLRRNFTIDDAAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDSNTEATARKFVNAWILVLWGAGGTARAEQAKPEPKPQARSQARAQAHPHAAPSAQRPAPRRPKFKCPENYICETR*
Ga0105245_124253461	3300009098	Miscanthus Rhizosphere	HWKRGLYAQVYLRRNFTIDDAAKRTRFQCAAFHLTREGAKPQDGFLCVTSWNNKFVKLRLTTLSDTGTETTARKYVGAWVPVLWGGGSGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICEAR*
Ga0105243_129820761	3300009148	Miscanthus Rhizosphere	NFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQV
Ga0105242_106951841	3300009176	Miscanthus Rhizosphere	RTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDASTEASARKYVSAWVPVLWGAGGAGISRAEQVREPVRPEPRPQVRARPHQVHRAPVRPRFKCPEGYICEVR*
Ga0105248_114201362	3300009177	Switchgrass Rhizosphere	RFQCAAFHLTREGAKPQDGFLCVTSWNNKFVKLRLTTLSDTGTETTARKYVGAWVPVLWGGGSGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICEAR*
Ga0105238_121969871	3300009551	Corn Rhizosphere	MRRDGAKPQDGFLCVTSWNNKFVKFRLTTLSDKDTEAAAKKHVSAWIPVLWGAGARTERAEERREERHAAPPPARRPVRRPVCPPGYICPGINAPR*
Ga0105249_133345542	3300009553	Switchgrass Rhizosphere	VRADAFLAQPRGIYVQVYLRRNFTIEDSAKRTRFQCAAFHLTRDGAKPQDGYLCVTSWNNKFVKLRLTTLSDTNTEAPARKFVSAWVPVLWGAGGTSRAEQIKPEPHPRAESRAQQRAQAPRHPAVRRAPACPQGYICEYR*
Ga0105249_133601711	3300009553	Switchgrass Rhizosphere	DDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICETR*
Ga0134063_104112812	3300010335	Grasslands Soil	LNRFDAAEGKDPDVTPGTRWPSTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETIARKYVSAWVPVLWGGGGTSRAEQVREPVRPEPRPQVRARPQQVHRAPARPRFKCPEGYICEVR*
Ga0105239_134725341	3300010375	Corn Rhizosphere	FLAQPRGLYAQVYLRRNFTIDDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICETR*
Ga0134122_117710581	3300010400	Terrestrial Soil	NFTIDDAAKRTRFQCAAFHLTRDGAKPQDGFLCVTAWNNKFVKLRLTTLSDNNTEASARKFVTAWIPVLWGGGSRAEQVKPEPKPQARPHAQQPPRRPVIRRPVCPQGYICEVR*
Ga0126350_106487362	3300010880	Boreal Forest Soil	SGWKLDVFIYDLKRAAIPDDPKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDAAKRTRFQCATFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNDTETTARKYVSAWVPVLWGVGGISRAEQVREPVRPEPRPQVQARPHQVHRAPARPRFKCPEGYICEVR*
Ga0137358_103598282	3300012582	Vadose Zone Soil	ERARAEAFLAQPRGLYAQVYLRRNFTIEDATKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRVRARPQQVHRAPARPRFKCPEGYICEVR*
Ga0157293_103317082	3300012898	Soil	DVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICETR*
Ga0157291_102562762	3300012902	Soil	AQPRGIYAQVYLRRNFTIDDGAKRTRFQCAAFHLTRDGAKPQDGYLCVTSWNNKFVKLRLTTLADNNTEAAARKFVNAWIPVLWGGGSRAEQAKPEPKARAQARPEARPHRAAPAHRPAPPRRRFRCPENYICETR*
Ga0157295_102122411	3300012906	Soil	LAIVRAEFERARTDAFLAQPRGIYAQVYLRRNFTIDDGAKRTRFQCAAFHLTRDGAKPQDGYLCVTSWNNKYVKLRLTTLADNNTEAAARKFVNAWIPVLWSGGSRAEQAKPEPKARAQARPEARPHRAAPAHRPAPPRRR
Ga0157308_103658511	3300012910	Soil	MARSICGTIDDTAKRTRFQCVAFHLTRDGAKPQDGYLCVTSWNNKFVKLRLTTLSDTNTEAPARKFVSAWVPVLWGAGGTSRAEQVKPEPQPRAESRAQQRAQAPRRPAVRRAPACPQGYICEYR*
Ga0137413_115672321	3300012924	Vadose Zone Soil	KLDVFIYDLKRAAIPDDVKSAIVRAEFERTRADTFLAQPRGIYAQVYLRRNFTIEDSAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLADSSTEAAARNHVTAWIPVLWGSGSRADDEKPQVKKPTARAQPARSARPVVRRVQQCPQGYICR*
Ga0164300_106579051	3300012951	Soil	AIPDDAKSAIVKAEFERARAEAFLAQPRGIYAQVYLRRNFTIDDAAGRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDTSTEASTRKYISAWVPVLWGAGGAGISRAEQVREPVRPEPRSQVRARPHQVHRAPVRPRFKCPEGYICEVR*
Ga0164307_100548841	3300012987	Soil	IPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDAAGRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDTSTEASARKYISAWVPVLWGAGGAGISRAEQVREPVRPEPRSQVRARPHQVHRAPVRPRFKCPEGYICEVR*
Ga0157375_114163372	3300013308	Miscanthus Rhizosphere	GFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICETR*
Ga0182008_102128641	3300014497	Rhizosphere	NGIYAQVYLRQNFTIEDAGKRTRFQCAAFYLTRDGAKPQDGYLCVTAWNNKFVKLRLATLSDSNTETMARKFVTAWIPVLWGGGGVARAEPEKAAPRTVTPRAMPPHVAAARAAAPARATHRPPPVRHIAPRRPKCPEGYICEYR*
Ga0157377_109940192	3300014745	Miscanthus Rhizosphere	YLRRNFTIDDAAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETAARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICETR*
Ga0157376_110750731	3300014969	Miscanthus Rhizosphere	ARADAFLAQPRGLYAQVYLRRNFTIDDAAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDSNTEATARKFVNAWIPVLWGAGGTARAEQAKPEPKPQARSQARAQAHPHAAPSAQRPAPRRPKFKCPENYICETR*
Ga0157376_115042011	3300014969	Miscanthus Rhizosphere	GLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDTSTEASARKYVSAWVPVLWGAGGAGISRAEQVREPVRPEPRPQVRARPHQVHRAPVRPRFKCPEGYICEVR*
Ga0167658_10947522	3300015195	Glacier Forefield Soil	DDAAKRTRFQCAAFHLTRDGAKPQDGYLCVTAWNNKFVKLRLTTLSDNNTETSARKFVNAWIPVLWGGGAYRAEQGKPEPKAEARPLPQAHPAPRRPVVRRQPACPPGFICEYR*
Ga0173478_107496591	3300015201	Soil	FEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPAR
Ga0132255_1008075211	3300015374	Arabidopsis Rhizosphere	SGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARADAFLAAPRGIYAQVYLRRNFTIEDAAKRTRFQCAAFHLTRDGAKPQDGYLCLTAWNNKFVKLRFATLSDNGTEVAARKYVAAWIPVLWGGGGAARAEQIRSEPEPAPARVAPRAVHRAPPPRRPVMRRPKCPENYICEYR*
Ga0190270_108605382	3300018469	Soil	CAAFHLTRDGAKPQDGYLCVTSWNNKFVKLRLTTLSDTNTEAPARKFVSAWVPVLWGAGGTSRAEQVKPEPQPRAESRAQQRAQAPRRPAVRRAPACPQGYICEYR
Ga0190274_133403881	3300018476	Soil	LDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDATKRTRFQCAAFHLTRDGAKPQDGFLCVSSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPQVRARPRQVHRAPARPRFKCPEGYICEVR
Ga0190271_112610392	3300018481	Soil	LDVFIYDLKRAAIPDDAKSAIVRAEFERARADAFLAHPRGIYAQVYLRRNFTIEDGGKRTRFQCATFHMTRDGAKPQDGFLCVTSWNNKFVKLRLTTLADSNTENDARKHVAAWIAVLWGGGSRIEAEKPAKPAPAAAAARPERRTARPEPRAQQQRAQPPRAQVRPAPRRPRCPEGYICEYR
Ga0190273_121633991	3300018920	Soil	DDAKSAIVRAEFERARADTFLAQPRGIYAQVYLRRNFTIEDSAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARQYVAAWVPVLWGGGAASSRAEHVRESVRPEPRTQAQPRPRPVHRAPARPRFKCPEGYICETR
Ga0222622_114180071	3300022756	Groundwater Sediment	DYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDAAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRVRARPQQVHRPARPRFKCPE
Ga0247754_10010662	3300023102	Soil	MRGVSSDPDGAKPQDGYLCVTSWNNNFVKLRLTTLSDTNTEAPARKFVSAWVPVLWGAGGTSRAEQVKPEPQPRAESRAQQRAQAPRRPAVRRAPACPQGYICEYR
Ga0179591_11456731	3300024347	Vadose Zone Soil	LRRNFTIEDSAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLADSSTEAAARNHVMAWIPVLWGGGSRADDEKPQAKKARAQPAAHRPPAHAQPARAARPVVRRAPRCPEGYICR
Ga0207697_101831751	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	FQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICETR
Ga0207642_104114532	3300025899	Miscanthus Rhizosphere	DDAKSAIVKAEFERARAEAFLAQPRGIYAQVYLRRNFTVDDVAGRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGAGGAGISRAEQVREPVRPEPRPQVRARPHQVHRAPVRPRFKCPEGYICEVR
Ga0207707_103769021	3300025912	Corn Rhizosphere	RRCGKRTRFQCAAFHLTRDGAKPQDGFLCVTAWNNKFVKLRLTTLSDNNTEASARKFVTAWIPVLWGGGSRAEQVKPEPKPQARPHAQQPPRRPVIRRPVCPQGYICEVR
Ga0207704_116416161	3300025938	Miscanthus Rhizosphere	EFERVRADAFLAQPRGLYAQVYLRRNFTIDDAAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDSNTEATARKFVNAWILVLWGAGGTARAEQAKPEPKPQARSQARAQAHPHAAPSAQRPAPRRPKFKCPENYICETR
Ga0207689_111855441	3300025942	Miscanthus Rhizosphere	SAIDDAGKRTRFQCAAFHLTRDGAKPQDGFLCVTAWNNKFVKLRLTTLSDNNTEASARKFVTAWIPVLWGGGSRAEQVKPEPKPQARPHAQQPPRRPVIRRPVCPQGYICEVR
Ga0207679_113114711	3300025945	Corn Rhizosphere	GDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTDAFLAQPRGIYAQVYLRRNFTIDDGAKRTRFQCAAFHLTRDGAKPQDGYLCVTSWNNKFVKLRLTTLADNNTEAAARKFVNAWIPVLWGGGSRAEQAKPEPKARAQARPEARPHRAAPAHRPAPPRRRFRCPENYICETR
Ga0207651_115616331	3300025960	Switchgrass Rhizosphere	WKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICETR
Ga0207712_117075621	3300025961	Switchgrass Rhizosphere	VRAEFERVRADAFLAQPRGIYVQVYLRRNFTIEDSAKRTRFQCTAFHPDGAKPQDGYLCVTSWNNNFVKLRLTTLSDTNTEAPARKFVSAWVPVLWGAGGTSRAEQVKPEPQPRAESRAQQRAQAPRHPAVRRAPACPQGYICEYR
Ga0207677_108506042	3300026023	Miscanthus Rhizosphere	VFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGIYAQVYLRRNFTIDDAAGRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDASTEASARKYVSAWVPVLWGAGGAGISRAEQVREPVRPEPRPQVRARPHQVHRAPVRPRFKCPEGYICEVR
Ga0207703_101014861	3300026035	Switchgrass Rhizosphere	DGVGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICETR
Ga0207639_107073181	3300026041	Corn Rhizosphere	GKRTRFQCAAFHLTRDGAKPQDGFLCVTAWNNKFVKLRLTTLSDNNTEASARKFVTAWIPVLWGGGSRAEQVKPEPKPQARPHAQQPPRRPVIRRPVCPQGYICEVR
Ga0207641_121108202	3300026088	Switchgrass Rhizosphere	PRGLYAQVYLRRNFTVDDAAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGISRAEQVREPVRSEPRPQVRARPRQVHRAPARPRFKCPEGYICEAR
Ga0207648_111583192	3300026089	Miscanthus Rhizosphere	PDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICETR
Ga0207676_118127842	3300026095	Switchgrass Rhizosphere	FMAQPRGLYAQVYLRRNFTIDDAAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTEATARKFVAAWVPVLWGGGGAAASSRAEQIRETARPEPRAQPRPRPVHRAPARPRFKCPEGYICETR
Ga0207675_1024012582	3300026118	Switchgrass Rhizosphere	HLTRDGAKPQDGYLCVTSWNNKFVKLRLTTLADNNTEAAARKFVNAWIPVLWGGGSRAEQAKPEPKARAQGRPEARPHRAAPAHRPAPPRRRFRCPENYICETR
Ga0207675_1024659412	3300026118	Switchgrass Rhizosphere	RRNFTIEDSAKRTRFQCAAFHLTRDGAKPQDGYLCVTSWNNKFVKLRLTTLADSNTEAAARNHVLAWVPVLWGSGSRTADEKPEAKKPAARGQAVHHAPPARPARPTVRRAPRCPEGYICEQR
Ga0207428_102064091	3300027907	Populus Rhizosphere	DGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERSRQDVFLAAPRGLYAQVYLRRNFTIEDGKVTRFQCAAFYLKRDGARPQDGFLCVTSWRNKFIKFRMTTLSDKDTEVAARKYMAAWVPVLWGPAARAEQPAPAAAKKAVAPRRPVVRRFVCPPGYICPR
Ga0268264_122198791	3300028381	Switchgrass Rhizosphere	QPRGIYAQVYLRRNFTVDDVAGRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDASTEASARKYVSAWVPVLWGAGGAGISRAEQVREPVRPEPRPQVRARPHQVHRAPVRPRFKCPEGYICEVR
Ga0307295_101153321	3300028708	Soil	IVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDAAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRVRARPQQVHRPARPRFKCPEGYICEAR
Ga0307304_105885271	3300028885	Soil	FIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDAAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRVRARPQQVHRPARPRFKCPEGYICEAR
Ga0265329_102742551	3300031242	Rhizosphere	AEFERSRADAFIAQPRGLYAQVYLRRNFTIEDGAKRTRFQCSTFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDGTTEETARKYVSAWIPVLWGGGGGESGPASSSRAQQIPAEPAPIRPAARPHHPVHPVHRAPVRARPRCPEGYICEYR
Ga0170820_102745971	3300031446	Forest Soil	NDSTNFEKVKPGDGYGLDYSQSGWKLDVFVYDLKRAAIPEDVKTAIVKAEFERSRAEAFLAQPRGLYAQVYLRRNFTIDDQAHRTRFQCASFHLTRDGAKPQDGYLCLTAWNNKFIKFRLTTLADTNTEDAARKYVAAWMPVLWGGGGGASSRAEQVREQVRPEPRSQARPRPQQ
Ga0310813_115422481	3300031716	Soil	GLYAQVYLRRNFTIDDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICETR
Ga0310892_113585741	3300031858	Soil	AKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPQVRARPRQVHRAPARPRFKCPEGYICEAR
Ga0310885_105400741	3300031943	Soil	AFLAQPRGLYAQVYLRRNFTIDDVAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDNNTETTARKFVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICETR
Ga0308176_125376651	3300031996	Soil	RFQCAAFHLTRDGAKPQDGYLCVTSWNNKFVKLRLTTLSDTNTEAEARKFVTAWIPVLWGPGGSARAEQVREPIRPAPHLRPHAHPAHRPAPPRRPRFKCPENYICETR
Ga0315910_111401501	3300032144	Soil	FERSRPGEGYGLDYSQSGWKLDVFIYDLKRRAIPDDAKSAIVRAEFERSREDVFLAHPRGIYAQVYLRRNFTIEDPVKRTRFQCAAFHLTRDGAKPQDGYLCVTSWNNKFIKVRMTTLSDRENERIARGYIAAWIPVLWSGTNARAEQKPATAAQPRARRRAHPVPRVRRPAPCPAGYIC
Ga0307470_116941181	3300032174	Hardwood Forest Soil	LRRNFTIDDTAKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLTTLSDTSTETTARKYVSAWVPVLWGGGGGISRAEQVREPVRSEPRPRARARPQQVHRAPARPRFKCPEGYICEAR
Ga0335084_112707842	3300033004	Soil	EFERARADTFLAQPRGIYAQVYLRRNFTIEDSAKRTRFQCAAFHLTRDGAKPQDGYLCVTSWNNKFVKLRLTTLADSTTEAAARNHVMAWVPVLWGSGSRASDDKPEAKKPAARGQAAHAPPARPARPPVRRVQRCPEGYICR
Ga0299912_103930662	3300033489	Soil	RADAFLAQPRGLYAQVYLRRNFTIEDGKRTRFQCAAFHLTRDGAKPQDGFLCVTSWNNKFVKLRLSTLSNSDSEATARKFVAAWIPVLWGSGSRAEPASTKAAPKAAPKSRAQQPQRRAPPRRVQRCPEGYICR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094127

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences