Metagenome Family F094084

Basic Information
Family ID	F094084
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	45 residues
Representative Sequence	MSAQPEVWRVSTVEGIFETDLETLKQWIVEGCVLPTDKVSKGNLS
Number of Associated Samples	93
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.11 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	93.40 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Most Common Taxonomy
Group	Bacteria (95.283 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (9.434 % of family members)
Environment Ontology (ENVO)	Unclassified (44.340 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.264 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.70% β-sheet: 19.18% Coil/Unstructured: 67.12%
Feature Viewer

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Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF09924	LPG_synthase_C	7.55
PF00933	Glyco_hydro_3	2.83
PF14714	KH_dom-like	0.94
PF13290	CHB_HEX_C_1	0.94
PF00756	Esterase	0.94
PF01833	TIG	0.94
PF01027	Bax1-I	0.94
PF01551	Peptidase_M23	0.94
PF00873	ACR_tran	0.94
PF07676	PD40	0.94
PF13365	Trypsin_2	0.94
PF00565	SNase	0.94
PF02866	Ldh_1_C	0.94
PF00903	Glyoxalase	0.94
PF13602	ADH_zinc_N_2	0.94
PF00069	Pkinase	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.77
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	2.83
COG0039	Malate/lactate dehydrogenase	Energy production and conversion [C]	0.94

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.28 %
Unclassified	root	N/A	4.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.28 %
Unclassified	root	N/A	4.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.28 %
Unclassified	root	N/A	4.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	16.04 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	11.32 %
Unclassified	root	N/A	4.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	11.32 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	4.72 %
Unclassified	root	N/A	4.72 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.94 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	11.32 %
Unclassified	root	N/A	4.72 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	3.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.94 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.94 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	11.32 %
Unclassified	root	N/A	4.72 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	3.77 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.94 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	11.32 %
Unclassified	root	N/A	4.72 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	3.77 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.94 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	11.32 %
Unclassified	root	N/A	4.72 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	3.77 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.94 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_11757128	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300000955\|JGI1027J12803_108219997	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300002562\|JGI25382J37095_10080224	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300004643\|Ga0062591_101633309	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300005093\|Ga0062594_101581919	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300005093\|Ga0062594_101669882	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	664	Open in IMG/M
3300005175\|Ga0066673_10203237	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300005293\|Ga0065715_10337715	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300005334\|Ga0068869_100174586	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1681	Open in IMG/M
3300005334\|Ga0068869_100487904	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1027	Open in IMG/M
3300005339\|Ga0070660_100064349	All Organisms → cellular organisms → Bacteria	2853	Open in IMG/M
3300005345\|Ga0070692_10161115	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300005355\|Ga0070671_100234401	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300005364\|Ga0070673_101609548	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300005434\|Ga0070709_10155176	All Organisms → cellular organisms → Bacteria → Acidobacteria	1586	Open in IMG/M
3300005440\|Ga0070705_101777936	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300005459\|Ga0068867_101207144	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300005518\|Ga0070699_102050298	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005536\|Ga0070697_101866116	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005546\|Ga0070696_100283437	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300005546\|Ga0070696_101513129	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005556\|Ga0066707_10935755	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005564\|Ga0070664_102157779	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	529	Open in IMG/M
3300005586\|Ga0066691_10910015	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005618\|Ga0068864_100985217	All Organisms → cellular organisms → Bacteria → Acidobacteria	835	Open in IMG/M
3300005618\|Ga0068864_101529646	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300005719\|Ga0068861_101693331	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005834\|Ga0068851_10573246	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300005841\|Ga0068863_101644182	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	652	Open in IMG/M
3300005843\|Ga0068860_101502211	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300005844\|Ga0068862_102124150	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005983\|Ga0081540_1217906	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300006196\|Ga0075422_10010515	All Organisms → cellular organisms → Bacteria	3007	Open in IMG/M
3300006755\|Ga0079222_10440198	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300006852\|Ga0075433_10342568	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300006852\|Ga0075433_11516455	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	579	Open in IMG/M
3300006880\|Ga0075429_101363668	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300006904\|Ga0075424_100095662	All Organisms → cellular organisms → Bacteria	3127	Open in IMG/M
3300006954\|Ga0079219_10471593	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300007004\|Ga0079218_11221523	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300009098\|Ga0105245_11383691	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300009101\|Ga0105247_11699022	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	522	Open in IMG/M
3300009157\|Ga0105092_10878801	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300009162\|Ga0075423_13208730	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300009177\|Ga0105248_11850851	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300009553\|Ga0105249_10083605	All Organisms → cellular organisms → Bacteria	2971	Open in IMG/M
3300009553\|Ga0105249_11639468	Not Available	716	Open in IMG/M
3300010373\|Ga0134128_11014801	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300010397\|Ga0134124_10648388	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1039	Open in IMG/M
3300010397\|Ga0134124_11116008	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300010400\|Ga0134122_12517307	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300010403\|Ga0134123_10198245	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300010403\|Ga0134123_10559607	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1090	Open in IMG/M
3300010403\|Ga0134123_11996731	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	638	Open in IMG/M
3300011119\|Ga0105246_10023196	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4012	Open in IMG/M
3300012022\|Ga0120191_10156839	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300012355\|Ga0137369_10173322	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M
3300012361\|Ga0137360_11650934	Not Available	546	Open in IMG/M
3300012517\|Ga0157354_1036335	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300012681\|Ga0136613_10405860	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300012898\|Ga0157293_10344103	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300012948\|Ga0126375_11858485	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300012971\|Ga0126369_11463526	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300013102\|Ga0157371_11000492	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300013297\|Ga0157378_10656912	All Organisms → cellular organisms → Bacteria → Acidobacteria	1065	Open in IMG/M
3300013308\|Ga0157375_13737283	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300014325\|Ga0163163_10245376	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1841	Open in IMG/M
3300014745\|Ga0157377_11521006	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300014829\|Ga0120104_1068795	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300015371\|Ga0132258_11409403	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1760	Open in IMG/M
3300015374\|Ga0132255_103349506	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300018000\|Ga0184604_10149771	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300018466\|Ga0190268_11641223	Not Available	569	Open in IMG/M
3300019377\|Ga0190264_10288538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300019883\|Ga0193725_1009333	All Organisms → cellular organisms → Bacteria	2795	Open in IMG/M
3300022756\|Ga0222622_11088435	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300025325\|Ga0209341_10340354	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300025735\|Ga0207713_1203718	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300025904\|Ga0207647_10315346	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	889	Open in IMG/M
3300025908\|Ga0207643_10229864	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300025908\|Ga0207643_10382579	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	887	Open in IMG/M
3300025910\|Ga0207684_10587484	All Organisms → cellular organisms → Bacteria → Proteobacteria	952	Open in IMG/M
3300025912\|Ga0207707_10920152	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	722	Open in IMG/M
3300025918\|Ga0207662_10391908	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300025923\|Ga0207681_11342967	Not Available	600	Open in IMG/M
3300025925\|Ga0207650_11543008	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300025930\|Ga0207701_10750523	All Organisms → cellular organisms → Bacteria → Acidobacteria	824	Open in IMG/M
3300025930\|Ga0207701_11435251	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300025938\|Ga0207704_11334684	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300025942\|Ga0207689_11214763	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300025945\|Ga0207679_12067788	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	518	Open in IMG/M
3300026035\|Ga0207703_10651095	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300026035\|Ga0207703_10974618	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300026088\|Ga0207641_10821891	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	920	Open in IMG/M
3300026118\|Ga0207675_100018071	All Organisms → cellular organisms → Bacteria → Acidobacteria	6576	Open in IMG/M
3300027639\|Ga0209387_1106176	Not Available	694	Open in IMG/M
3300027873\|Ga0209814_10273336	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300031562\|Ga0310886_10400431	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300031740\|Ga0307468_102257444	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300031740\|Ga0307468_102539244	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300031901\|Ga0307406_11348029	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300031911\|Ga0307412_12094521	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300031940\|Ga0310901_10541748	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300032012\|Ga0310902_10789089	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300032180\|Ga0307471_103767916	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300033480\|Ga0316620_10783578	All Organisms → cellular organisms → Bacteria → Acidobacteria	913	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.89%
Host-Associated	Host-Associated	48.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.11%
Plants	Host-Associated → Plants	48.11%
Aquatic	Environmental → Aquatic	3.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.70%
Freshwater	Environmental → Aquatic → Freshwater	1.89%
Sediment	Environmental → Aquatic → Sediment	1.89%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.87%
Loam	Environmental → Terrestrial → Soil → Loam	11.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.89%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.94%
Ice	Environmental → Aquatic → Freshwater → Ice	0.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	9.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	6.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.94%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.94%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025735	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_117571281	3300000789	Soil	MSAQPEIWRVSTIEGTFETDLETLKQWIVEGCVLPTDKVSKGTLNWID
JGI1027J12803_1082199971	3300000955	Soil	MSAQPEIWRVSTIEGTFETDLETLKQWIVEGCVLPTD
JGI25382J37095_100802241	3300002562	Grasslands Soil	MSAQLEQWRVSTVEGVFETDLETLRQWITEGSVAPTDKVSKGNLNWIDAGRAPM
Ga0062591_1016333091	3300004643	Soil	MSAQPEIWRVSTIEGVFEADLETLRQWILEGCVQPTDKVTKGNLSWIE
Ga0062594_1015819191	3300005093	Soil	MSAQPEVWRVSTVEGIFETDLETLKQWISEGCVLPTDKVSKGTLNWIDAGRAPML
Ga0062594_1016698822	3300005093	Soil	MSAQPEVWRVSTVEGIFETDLETLKQWIVEGCVLPTDKVSKGNLS
Ga0066673_102032371	3300005175	Soil	MSAQVEQWRVSTIAGVFETDLETLRQWITEGSVAPTDKVSKGNLNWIDAG
Ga0065715_103377153	3300005293	Miscanthus Rhizosphere	MSAQPEMWRVSTIEGVFETDLETLKQWIVEGCVLPTDKVSKGSLSWIDAGRVPKLKG
Ga0068869_1001745863	3300005334	Miscanthus Rhizosphere	MSAQPEVWRVSTVEGIFETDLETLKQWIVEGCVLPTDKVS
Ga0068869_1004879041	3300005334	Miscanthus Rhizosphere	MSTNPELWRVSTVEGLFETDLETLKQWIREDCVLPTDKVSKGNLNWIDAG
Ga0070660_1000643496	3300005339	Corn Rhizosphere	MSAQPEVWRVSTVEGIFETDLETLRQWILEGCVLPTDKVSKGNLSWIDAGRVPKLKG
Ga0070692_101611152	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MSAQPEVWRVSTVEGVFETDLETLKQWIVEGCVLPTDKVSK
Ga0070671_1002344011	3300005355	Switchgrass Rhizosphere	MSAQPEMWRVSTIEGVFETDLETLKQWIVEGCVLPTDKVSKGSLSWIDAGR
Ga0070673_1016095481	3300005364	Switchgrass Rhizosphere	MSAQPETWRVSTIEGVFEADLETLRQWILEGCVQPTDKVTKGNLNW
Ga0070709_101551762	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSAQPEIWRVSTYEGVFETDFQTLQQWIVEGCVLPTDKVSKGKLNWIE
Ga0070705_1017779361	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSAQPETWRVSTIEGVFEADLETLRQWILEGCVQPTDKVTKGNLNWIE
Ga0068867_1012071441	3300005459	Miscanthus Rhizosphere	MSAQQEQWRVSTVEGVFETDLDTLRQWILEGCVLPTDKVSKGTLNWI
Ga0070699_1020502982	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSAQPEIWRVSTAEGVFETDVETLKQWIAEGCVLPTDKVSKGSLKWIEAGCAPM
Ga0070697_1018661161	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSAQAETWRVSTVEGVFETDVETLKQWIAEGCVLPTDKVSKGSL
Ga0070696_1002834372	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSAQPEVWRVSTVEGIFETDLDTLKQWIVEGCVLPTDKVSKGNLSWIEA
Ga0070696_1015131291	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSAQAEIWRVSTAEGVFETDVETLKQWIAEGCVLPTDKVSKGSLKWIEAGCAPM
Ga0066707_109357551	3300005556	Soil	MSAQLEQWRVNTVNGVFETDLETLQRWITEGSVAPTDK
Ga0070664_1021577792	3300005564	Corn Rhizosphere	MSAQPELWRVSTIEGIFETDLETLKQWIVEGCVLPTDKVS
Ga0066691_109100152	3300005586	Soil	MSAQVEQWRVSTVAGVFETDLETLRQWITEGSVAPTDKVSK
Ga0068864_1009852171	3300005618	Switchgrass Rhizosphere	MSTTPELWRVSTVEGLFETDLETLKQWIREDCVLPTDKVSKGN
Ga0068864_1015296462	3300005618	Switchgrass Rhizosphere	MSAQPELWRVSTIEGIFETDLETLKQWIVEGCVLPTD
Ga0068861_1016933311	3300005719	Switchgrass Rhizosphere	MSAQLEQWRVNTPEGVLETDLETLRQWIAEGSILPTDKVSKGS
Ga0068851_105732461	3300005834	Corn Rhizosphere	MSAQPEMWRVSTIEGVFETDLETLKQWIVEGCVLPTDKVSKGSLSWIDAGRVPK
Ga0068863_1016441823	3300005841	Switchgrass Rhizosphere	MSAQPELWRVSTIEGIFETDLETLKQWIVEGCVLPTDKVSKGNLSWI
Ga0068860_1015022112	3300005843	Switchgrass Rhizosphere	MSAQPEIWRVSTYEGVFETDFQTLQQWIVEGCVLPT
Ga0068862_1021241501	3300005844	Switchgrass Rhizosphere	MSTNPELWRVSTVEGLFETDLETLKQWIREDCVLPTDKVSKGNLNWIDAGR
Ga0081540_12179062	3300005983	Tabebuia Heterophylla Rhizosphere	MSAQPEVWRVSTVEGVFETDLDTLRQWILEGCVLPTDKVSKGN
Ga0075422_100105154	3300006196	Populus Rhizosphere	MSAQPEVWRVNTVEGIFETDLETLKQWIVEGCVLPT
Ga0079222_104401982	3300006755	Agricultural Soil	MSAQPEVWRVSTVEGIFETDLETLKQWIGEGCVLPTDKVSKGNLSWI
Ga0075433_103425681	3300006852	Populus Rhizosphere	MSAQPEVWRVSTIEGIFETDLETLKQWILEGCVLPTDKVSKGNLSWIDAGR
Ga0075433_115164551	3300006852	Populus Rhizosphere	MSAQPEVWRVSTIEGIFETDLETLKQWIVEGCVLPTDKVSKGNLSWI
Ga0075429_1013636682	3300006880	Populus Rhizosphere	MSAQPEVWRVSTVEGIFETDLETLKQWIIEGCVLPTDKVSKGNLSWID
Ga0075424_1000956621	3300006904	Populus Rhizosphere	MSAQPEVWRVSTIEGIFETDLETLKQWILEGCVLPTDKVSKGNLSWIDAGRVPK
Ga0079219_104715931	3300006954	Agricultural Soil	MSAQPEVWRVSTVEGVFETDLETLKQWILEGCVLPTDKVSKGNLGWIE
Ga0079218_112215232	3300007004	Agricultural Soil	MSAQVELWRVSTVEGTFETDLETLKQWIAEGCVLPTDKVSKGNL
Ga0105245_113836912	3300009098	Miscanthus Rhizosphere	MSTTPELWRVSTVEGLFETDLETLKQWIREDCVLP
Ga0105247_116990221	3300009101	Switchgrass Rhizosphere	MSAQPAVRRVGPPDGIFEADLEQLDQSIIEGCVLPTDKVTKGNLSWI
Ga0105092_108788011	3300009157	Freshwater Sediment	MSAQPETWRVSTIEGVFEADLETLRQWILEGCVQPTDK
Ga0075423_132087301	3300009162	Populus Rhizosphere	MSAQPEIWRVSTVEGVFETDLETLKQWIAEGCVLPTDKVSKGSLNWI
Ga0105248_118508511	3300009177	Switchgrass Rhizosphere	MSAQPEVWRVSTIEGVFETDLETLKQWIAEGCVLPTDK
Ga0105249_100836052	3300009553	Switchgrass Rhizosphere	MSAQPEIWRVSTYEGVFETDFQTLQQWIVEGCVLPTD
Ga0105249_116394681	3300009553	Switchgrass Rhizosphere	MSAQTEIWRVSTAKGTFETDLESLIQRIVEGTVLPTDKVSKGNLSWIE
Ga0134128_110148012	3300010373	Terrestrial Soil	MSAQPEMWRVSTIEGVFETDLETLKQWIVEGCVLPTDKVS
Ga0134124_106483882	3300010397	Terrestrial Soil	MSAQPEVWRVSTVEGVFETDLETLKQWIVEGCVLPTDKVS
Ga0134124_111160081	3300010397	Terrestrial Soil	MSAQPEVWRVSTVEGIFETDLETLRQWILEGCVLPTDKVSKGNLS
Ga0134122_125173071	3300010400	Terrestrial Soil	MSAQPETWRVSTIEGVFEADLETLRQWILEGCVQPTD
Ga0134123_101982452	3300010403	Terrestrial Soil	MSAQPEVWRVSTVEGIFEADLETLKQWIVEGCVLPTDKVTKGNLSWIE
Ga0134123_105596072	3300010403	Terrestrial Soil	MSAQVEQWRVNTPEGIFETDLETLQQWIVEGCVLPSDKVCKGKLSWIEAGKA
Ga0134123_119967312	3300010403	Terrestrial Soil	MSAQPEVWRVSTVEGIFETDLETLQQWIVEGCVLPTDKVCKGNLSWIDAGRVP
Ga0105246_100231962	3300011119	Miscanthus Rhizosphere	MTDQSELWRVSTPEGIFEANLETLKQWISEGCVIPTDKVTKGNLNW
Ga0120191_101568392	3300012022	Terrestrial	MSAQPEIWRVSTIEGVFEADLETLKQWIHEGCVLPTDKVSKGSLNWI
Ga0137369_101733221	3300012355	Vadose Zone Soil	MSAQLEQWRVSTIDGVFETDLETLRQWISEGAVAPTDKVSKGKLNWIDAGRAP
Ga0137360_116509341	3300012361	Vadose Zone Soil	MSAQIEQWRVSTPTGVFEADLETLKEWIADGSVAPTDKVSKGSLNWIE
Ga0157354_10363351	3300012517	Unplanted Soil	MSAQPEMWRVSTIEGVFETDLETLKQWIVEGCVLPTDKVSKGNLSWIDAG
Ga0136613_104058601	3300012681	Polar Desert Sand	MMSAEVEKWRVSTIEGVFEADLDTLKQWIHEGCVLPTD
Ga0157293_103441031	3300012898	Soil	MSAQPEQWRVSTVEGIFEADLETLKQWIIEGAVLPTDKVSKGTLNW
Ga0126375_118584851	3300012948	Tropical Forest Soil	MSAQPEVWRVSTVEGVFETDLDTLKQWIHEGAVLPTDKVSKGNLSWIDAGKAPMLKA
Ga0126369_114635262	3300012971	Tropical Forest Soil	MSAPLQQWRVSTPTGVFEADLETLRQWISEGAVLPTDKVSKG
Ga0157371_110004921	3300013102	Corn Rhizosphere	MSTNPELWRVSTVEGLFETDLETLKQWIREDGALPTDKVSKG
Ga0157378_106569122	3300013297	Miscanthus Rhizosphere	MSAQPEIWRVSTYEGVFETDFQTLQQWIVEGCVLPTDKV
Ga0157375_137372831	3300013308	Miscanthus Rhizosphere	MTDQSELWRVSTPEGIFEANLETLKQWISEGCVIPTD
Ga0163163_102453763	3300014325	Switchgrass Rhizosphere	MSAQPEVWRVSTVEGIFETDLETLQQWIVEGCVLPTDKVCKGNLSWIDAGRVPKL
Ga0157377_115210061	3300014745	Miscanthus Rhizosphere	MSAQPEVWRVSTVEGIFETDLETLRQWILEGCVLPTD
Ga0120104_10687951	3300014829	Permafrost	MSAQVELWRVSTVEGEFETDLETLKQWIVEGCVLPTDKVSKGNLNWTDAGRAPML
Ga0132258_114094032	3300015371	Arabidopsis Rhizosphere	MSTNPEVWRVSTVEGLFEPDLETLKQWIREDCVLPTDKVSKG
Ga0132255_1033495061	3300015374	Arabidopsis Rhizosphere	MSAQPEVWRVSTAEGVFETDLETLRQWILEGCVLPTDKVCKGSQSWIDAGRVP
Ga0184604_101497712	3300018000	Groundwater Sediment	MSAQPGQWRVSTIEGVFEADLETLKQWIAEGCVQPTDKVSKGNLNWIEAG
Ga0190268_116412231	3300018466	Soil	MSAQVELWRVQTAEGVFEADLETLRQWIAEGAVVRSDK
Ga0190264_102885382	3300019377	Soil	MSAQVELWRVSTAEGVFEADLETLKQWIAEGCVLPTDKVS
Ga0193725_10093331	3300019883	Soil	MSAQLEQWRVSTVDGEFETDLETLRLWISEGAVAPTDKVSKGKLSWI
Ga0222622_110884351	3300022756	Groundwater Sediment	MSAQVETWRVDTIEGIFETDLDTLKQWIAEGCVLPTDKVS
Ga0209341_103403542	3300025325	Soil	MSAQVEVWRVITPEGTFETDLETLKQWIAEGCVVS
Ga0207713_12037181	3300025735	Switchgrass Rhizosphere	MSAQPEVWRVSTIEGVFETDLETLQQWIVEGCVLPTDKVCK
Ga0207647_103153461	3300025904	Corn Rhizosphere	MTDQSELWRVSTPEGIFEANLETLKQWISEGCVVPTDKVTKG
Ga0207643_102298641	3300025908	Miscanthus Rhizosphere	MSAQPEVWRVSTVEGIFEADLETHKQWIVEGCVLPTDKVTKGNLSWI
Ga0207643_103825791	3300025908	Miscanthus Rhizosphere	MTDQSELWRVSTPEGVFEANLETLKQWISEGCVIPTDKVT
Ga0207684_105874842	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSAQPESWRVSTVEGVFETDLETLKQWIIEGCVLPTDKVSKGNLNWIE
Ga0207707_109201521	3300025912	Corn Rhizosphere	MSAQPEVWRVSTIEGVFETDFETLKQWIVEGCVLPTDKVSKGNLSWIE
Ga0207662_103919082	3300025918	Switchgrass Rhizosphere	MSAQPEVWRVSTVEGIFEADLETLKQWIVEGCVLPTDKVTK
Ga0207681_113429672	3300025923	Switchgrass Rhizosphere	MSAQVELWRVSTAEGVFETDLETLKQWIMEGCVLPTDKVS
Ga0207650_115430082	3300025925	Switchgrass Rhizosphere	MSAQPETWRVNTPEGIFETDLETLKQWILEGCVLPT
Ga0207701_107505231	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MSAQPETWRVSTIEGIFETDLETLKQWIVEGCVLPT
Ga0207701_114352511	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MSAQPEMWRVSTIEGVFETDLETLKQWIVEGCVLPTDKVSKGSLSWIDAGRVPKL
Ga0207704_113346841	3300025938	Miscanthus Rhizosphere	MSAQPETWRVSTIEGVFEADLETLRQWILEGCVQPTDKVTKGNLNWI
Ga0207689_112147632	3300025942	Miscanthus Rhizosphere	MSAQPEVWRVSTIEGIFETDLETLKQWIVEGCVLPTDKVSKG
Ga0207679_120677882	3300025945	Corn Rhizosphere	MSAQPDVWRVSTPEGIFETDLETLKQWIIEGCVLPTDKVTKGNLSWI
Ga0207703_106510952	3300026035	Switchgrass Rhizosphere	STVEGIFETDLETLRQWILEGCVLPTDKVCKGKLSWIDAGRV
Ga0207703_109746181	3300026035	Switchgrass Rhizosphere	MSAQPEVWRVSTVEGIFETDLETLRQWILEGCVLPTDKVCKGKLSWIDAGRVPKL
Ga0207641_108218911	3300026088	Switchgrass Rhizosphere	MSAQPEVWRVSTVEGIFETDLETLQQWIVEGCVLPTDKVSKG
Ga0207675_1000180713	3300026118	Switchgrass Rhizosphere	MSAQPEVWRVSTVEGIFETDLETLKQWISEGCVLPTDKVSKGTLN
Ga0209387_11061762	3300027639	Agricultural Soil	MSAQVEVWRVSTVEGVFETDLDTLRQWIVEGSVLPTDKVS
Ga0209814_102733362	3300027873	Populus Rhizosphere	MSAQPEIWRVSTVEGIFETDLETLKQWISEGCVLPTDKVSKGTLNW
Ga0310886_104004311	3300031562	Soil	MSAQPEVWRVSTVEGIFETDLETLKQWISEGCVLPTDKVSKATLN
Ga0307468_1022574441	3300031740	Hardwood Forest Soil	MSAQPEVWRVSTIEGVFETDFETLKQWIVEGCVLPTDKVSKGNLSWIEAG
Ga0307468_1025392441	3300031740	Hardwood Forest Soil	MSTQVEKWRVDTVEGIFETDLDTLKQWISEGCVLPTDK
Ga0307406_113480291	3300031901	Rhizosphere	MSAQPETWRVNTPEGIFETDLETLKQWILEGCVLPTDKVSKGNLSWIDAGRVPKLK
Ga0307412_120945212	3300031911	Rhizosphere	MSAQPEVWRVSTSEGVFEADLETLKQWIVEGCVLPTDKVTKRNQSWI
Ga0310901_105417481	3300031940	Soil	MSAQPEVWRVSTVEGIFETDLETLKQWIAEGCVQPTDKVSKGTLNW
Ga0310902_107890891	3300032012	Soil	MSAQHEVWRVSTVEGIFETDLETLKQWISEGCVLPTDKVSKGTLNW
Ga0307471_1037679161	3300032180	Hardwood Forest Soil	MSAQPEIWRVNTAEGVFETDVETLKQWIAEGCVLPTDKVSKGSLKWIDAGC
Ga0316620_107835782	3300033480	Soil	MSAQPEVWRVSTVEGVFETDLDTLKQWISEGSVLPTDKVSK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094084

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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