Metagenome / Metatranscriptome Family F094067

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094067
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	44 residues
Representative Sequence	MSDTPPVAGETGDERNNTRLYAGVIVVEVLVLAGIWLFQRYFGS
Number of Associated Samples	49
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.23 %
% of genes near scaffold ends (potentially truncated)	8.49 %
% of genes from short scaffolds (< 2000 bps)	83.02 %
Associated GOLD sequencing projects	41
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.415 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (38.679 % of family members)
Environment Ontology (ENVO)	Unclassified (38.679 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (45.283 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.83% β-sheet: 0.00% Coil/Unstructured: 54.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00474	SSF	42.45
PF14698	ASL_C2	27.36
PF00582	Usp	12.26
PF01402	RHH_1	0.94
PF00206	Lyase_1	0.94
PF02446	Glyco_hydro_77	0.94
PF00326	Peptidase_S9	0.94
PF02129	Peptidase_S15	0.94
PF13358	DDE_3	0.94
PF00155	Aminotran_1_2	0.94
PF01850	PIN	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1640	4-alpha-glucanotransferase	Carbohydrate transport and metabolism [G]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.42 %
Unclassified	root	N/A	23.58 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.42 %
Unclassified	root	N/A	23.58 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.42 %
Unclassified	root	N/A	23.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	41.51 %
Unclassified	root	N/A	23.58 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.58 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	5.66 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.58 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	5.66 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.58 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	5.66 %
Alphaproteobacteria bacterium ADurb.BinA305	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.BinA305	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.58 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	5.66 %
Alphaproteobacteria bacterium ADurb.BinA305	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.BinA305	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.58 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	4.72 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.94 %
Alphaproteobacteria bacterium ADurb.BinA305	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.BinA305	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.58 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	4.72 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.94 %
Alphaproteobacteria bacterium ADurb.BinA305	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.BinA305	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003858\|Ga0031656_10016781	All Organisms → cellular organisms → Bacteria	3067	Open in IMG/M
3300003858\|Ga0031656_10048983	All Organisms → cellular organisms → Bacteria → Acidobacteria	1682	Open in IMG/M
3300003858\|Ga0031656_10152712	Not Available	808	Open in IMG/M
3300003859\|Ga0031653_10177190	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300004151\|Ga0066602_10167379	All Organisms → cellular organisms → Bacteria → Acidobacteria	944	Open in IMG/M
3300004282\|Ga0066599_101341450	Not Available	542	Open in IMG/M
3300004778\|Ga0062383_10076586	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300004808\|Ga0062381_10322448	Not Available	574	Open in IMG/M
3300005833\|Ga0074472_11185546	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300006224\|Ga0079037_100026692	All Organisms → cellular organisms → Bacteria	4194	Open in IMG/M
3300006224\|Ga0079037_100044060	All Organisms → cellular organisms → Bacteria	3433	Open in IMG/M
3300006224\|Ga0079037_100117759	All Organisms → cellular organisms → Bacteria	2268	Open in IMG/M
3300006224\|Ga0079037_100140704	All Organisms → cellular organisms → Bacteria → Acidobacteria	2098	Open in IMG/M
3300006224\|Ga0079037_100669408	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1011	Open in IMG/M
3300006224\|Ga0079037_100765105	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300006224\|Ga0079037_100843025	All Organisms → cellular organisms → Bacteria → Acidobacteria	902	Open in IMG/M
3300006224\|Ga0079037_101330054	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300006224\|Ga0079037_101433919	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300006224\|Ga0079037_101907782	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300009009\|Ga0105105_10044006	All Organisms → cellular organisms → Bacteria	1992	Open in IMG/M
3300009037\|Ga0105093_10426386	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300009075\|Ga0105090_10091702	All Organisms → cellular organisms → Bacteria → Acidobacteria	1901	Open in IMG/M
3300009087\|Ga0105107_10648018	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300009091\|Ga0102851_10028608	All Organisms → cellular organisms → Bacteria	4228	Open in IMG/M
3300009091\|Ga0102851_10829425	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300009091\|Ga0102851_10948595	All Organisms → cellular organisms → Bacteria → Acidobacteria	932	Open in IMG/M
3300009091\|Ga0102851_13338069	Not Available	515	Open in IMG/M
3300009111\|Ga0115026_10270583	All Organisms → cellular organisms → Bacteria → Acidobacteria	1175	Open in IMG/M
3300009167\|Ga0113563_12500119	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300009167\|Ga0113563_12674117	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300009179\|Ga0115028_10150955	All Organisms → cellular organisms → Bacteria → Acidobacteria	1406	Open in IMG/M
3300009179\|Ga0115028_11848829	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300013315\|Ga0173609_10882537	Not Available	601	Open in IMG/M
3300022385\|Ga0210376_1100689	Not Available	513	Open in IMG/M
3300027726\|Ga0209285_10021964	All Organisms → cellular organisms → Bacteria	1816	Open in IMG/M
3300027778\|Ga0209464_10177017	Not Available	756	Open in IMG/M
3300027796\|Ga0209373_10270971	All Organisms → cellular organisms → Bacteria → Acidobacteria	699	Open in IMG/M
3300027841\|Ga0209262_10073730	Not Available	1572	Open in IMG/M
3300027841\|Ga0209262_10483514	Not Available	603	Open in IMG/M
3300027843\|Ga0209798_10075391	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300027843\|Ga0209798_10157982	Not Available	1134	Open in IMG/M
3300027871\|Ga0209397_10135145	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300027871\|Ga0209397_10256116	Not Available	825	Open in IMG/M
3300027871\|Ga0209397_10335424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.BinA305	729	Open in IMG/M
3300027871\|Ga0209397_10562292	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300027877\|Ga0209293_10101774	All Organisms → cellular organisms → Bacteria → Acidobacteria	1301	Open in IMG/M
3300027885\|Ga0209450_10000903	All Organisms → cellular organisms → Bacteria	14937	Open in IMG/M
3300027885\|Ga0209450_10714781	Not Available	727	Open in IMG/M
3300027887\|Ga0208980_10212804	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300027897\|Ga0209254_10002820	All Organisms → cellular organisms → Bacteria	15872	Open in IMG/M
3300027897\|Ga0209254_10184716	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1679	Open in IMG/M
3300027897\|Ga0209254_10231565	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1455	Open in IMG/M
3300027897\|Ga0209254_10234095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1445	Open in IMG/M
3300027897\|Ga0209254_10899637	Not Available	588	Open in IMG/M
3300027899\|Ga0209668_10019059	All Organisms → cellular organisms → Bacteria → Acidobacteria	3361	Open in IMG/M
3300027899\|Ga0209668_10055259	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2156	Open in IMG/M
3300027900\|Ga0209253_10016760	All Organisms → cellular organisms → Bacteria → Acidobacteria	6228	Open in IMG/M
3300027900\|Ga0209253_10196011	All Organisms → cellular organisms → Bacteria → Acidobacteria	1615	Open in IMG/M
3300031834\|Ga0315290_10901920	Not Available	750	Open in IMG/M
3300031997\|Ga0315278_10521282	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300032143\|Ga0315292_10304376	All Organisms → cellular organisms → Bacteria → Acidobacteria	1327	Open in IMG/M
3300032143\|Ga0315292_10351226	Not Available	1234	Open in IMG/M
3300032164\|Ga0315283_10901899	Not Available	941	Open in IMG/M
3300032177\|Ga0315276_10105736	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2870	Open in IMG/M
3300033406\|Ga0316604_10854009	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300033408\|Ga0316605_10023690	All Organisms → cellular organisms → Bacteria	3964	Open in IMG/M
3300033408\|Ga0316605_10037085	All Organisms → cellular organisms → Bacteria	3323	Open in IMG/M
3300033408\|Ga0316605_10248584	All Organisms → cellular organisms → Bacteria → Acidobacteria	1529	Open in IMG/M
3300033408\|Ga0316605_10307210	All Organisms → cellular organisms → Bacteria → Acidobacteria	1394	Open in IMG/M
3300033408\|Ga0316605_10483817	All Organisms → cellular organisms → Bacteria → Acidobacteria	1137	Open in IMG/M
3300033408\|Ga0316605_10569748	All Organisms → cellular organisms → Bacteria → Acidobacteria	1053	Open in IMG/M
3300033408\|Ga0316605_10588913	Not Available	1037	Open in IMG/M
3300033408\|Ga0316605_10815964	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M
3300033408\|Ga0316605_11942450	Not Available	573	Open in IMG/M
3300033413\|Ga0316603_10800449	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300033413\|Ga0316603_11789164	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300033413\|Ga0316603_12108309	Not Available	532	Open in IMG/M
3300033413\|Ga0316603_12111088	Not Available	532	Open in IMG/M
3300033414\|Ga0316619_11806727	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300033416\|Ga0316622_100019574	All Organisms → cellular organisms → Bacteria → Acidobacteria	5787	Open in IMG/M
3300033416\|Ga0316622_100104455	All Organisms → cellular organisms → Bacteria	2850	Open in IMG/M
3300033416\|Ga0316622_100367431	All Organisms → cellular organisms → Bacteria → Acidobacteria	1606	Open in IMG/M
3300033416\|Ga0316622_100466829	All Organisms → cellular organisms → Bacteria → Acidobacteria	1432	Open in IMG/M
3300033416\|Ga0316622_100619163	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300033416\|Ga0316622_101817183	Not Available	709	Open in IMG/M
3300033416\|Ga0316622_102197798	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300033418\|Ga0316625_100380139	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300033418\|Ga0316625_101008071	Not Available	742	Open in IMG/M
3300033419\|Ga0316601_100077130	All Organisms → cellular organisms → Bacteria → Acidobacteria	2600	Open in IMG/M
3300033419\|Ga0316601_100242137	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300033434\|Ga0316613_10744832	Not Available	672	Open in IMG/M
3300033482\|Ga0316627_100772912	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300033482\|Ga0316627_101322170	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300033482\|Ga0316627_101798064	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300033482\|Ga0316627_102253701	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300033483\|Ga0316629_10646346	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300033483\|Ga0316629_11081714	Not Available	635	Open in IMG/M
3300033488\|Ga0316621_10044642	All Organisms → cellular organisms → Bacteria → Acidobacteria	2174	Open in IMG/M
3300033488\|Ga0316621_10151024	Not Available	1390	Open in IMG/M
3300033488\|Ga0316621_10647887	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300033488\|Ga0316621_10803440	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300033521\|Ga0316616_101899561	All Organisms → cellular organisms → Bacteria → Acidobacteria	786	Open in IMG/M
3300033521\|Ga0316616_102669039	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300033521\|Ga0316616_103044212	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300033557\|Ga0316617_100547498	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300034075\|Ga0373895_005579	All Organisms → cellular organisms → Bacteria → Acidobacteria	1574	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.11%
Engineered	Engineered	1.89%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	59.43%
Terrestrial	Environmental → Terrestrial	38.68%
Wastewater	Engineered → Wastewater	0.94%
Bioremediation	Engineered → Bioremediation	0.94%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	56.60%
Soil	Environmental → Terrestrial → Soil	38.68%
Marine	Environmental → Aquatic → Marine	1.89%
Sediment	Environmental → Aquatic → Sediment	0.94%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.94%
Metal	Engineered → Bioremediation → Metal	0.94%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	38.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.81%
Lentic	Environmental → Aquatic → Freshwater → Lentic	14.15%
Sediment	Environmental → Aquatic → Freshwater → Sediment	12.26%
Lake	Environmental → Aquatic → Freshwater → Lake	5.66%
Pond	Environmental → Aquatic → Freshwater → Pond	4.72%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.94%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	0.94%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	38.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	19.81%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	14.15%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	12.26%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.66%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	4.72%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.94%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	0.94%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	38.68%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	15.09%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	14.15%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	7.55%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.66%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.72%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	4.72%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	4.72%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.94%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.94%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.94%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.94%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300003859	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR	Environmental	Open in IMG/M
3300004151	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300013315	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1B	Engineered	Open in IMG/M
3300022385	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S771 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027726	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027796	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034075	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A4A4.2	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0031656_100167813	3300003858	Freshwater Lake Sediment	MSDTPPVAGEPVAERNNTRLYAGVIVVQVIVVAGIWFFQRYFGS*
Ga0031656_100489832	3300003858	Freshwater Lake Sediment	MSDTPLVAGEPVAERNNTRLYAGVIVVEVIVVAGIWFFQRYFGT*
Ga0031656_101527121	3300003858	Freshwater Lake Sediment	MSDTPLVAGEPVAERNNTLMYAGVLVVEVIVVAGIWFFQRYFGS*
Ga0031653_101771902	3300003859	Freshwater Lake Sediment	MSDTPPVAGEPVAERNNTRLYAGVIVVEVIVVAGIWLFQRYFGS*
Ga0066602_101673791	3300004151	Freshwater	MSDTPPVAGEPVAERNNTRLYAGVIVVEVIVVAGIWLFQRYFGT*
Ga0066599_1013414502	3300004282	Freshwater	MSETRVTASDAVEDRDNTRLYAGVILVEVIVVVGIWLIQRYFGS*
Ga0062383_100765862	3300004778	Wetland Sediment	VSGTSSSAGGITNERRNIRLYAGVLVVEVIVLVAIWLIQRYFGA*
Ga0062381_103224482	3300004808	Wetland Sediment	MSDAPFVAGEPVAERNNTRLYVGVIVVEVIVVLGIYLFQRYFGT*
Ga0074472_111855462	3300005833	Sediment (Intertidal)	MSDTPLVAGGTGEERSNTRLYAGVIVVEIIVVTAIWLFQ
Ga0079037_1000266922	3300006224	Freshwater Wetlands	MTDTLLQAGGAADEQAHTRRYVGVIVVEVLAVIGIWLVQRYFGS*
Ga0079037_1000440606	3300006224	Freshwater Wetlands	MSDTPPVAGETGDERDNTRLYAGVIAVEVLVLAGIWLFQRYFGA*
Ga0079037_1001177592	3300006224	Freshwater Wetlands	MSETSQIPAGTGDERDNTRLYAGVIAVEVVVLVAIWLFQRYFGS*
Ga0079037_1001407042	3300006224	Freshwater Wetlands	MSDTLPPAGDAADERDNTRRYVGVIVVEVVVLAGIWLFQRYFGS*
Ga0079037_1006694081	3300006224	Freshwater Wetlands	MSPTQRGGGEAIGERDNTRLYAGVIVTEVIVLVAMWLFQRYFGA*
Ga0079037_1007651052	3300006224	Freshwater Wetlands	MSDTPPVASETGDERNNTRLYAGVIVVEVLVLAGIWLFQRYFGA*
Ga0079037_1008430252	3300006224	Freshwater Wetlands	VTDMRLQAAEHPEERNNTRLYAGVILVEVVVLAGIWFFQRYFGP*
Ga0079037_1013300542	3300006224	Freshwater Wetlands	VKDAPVITGEPRAERDNARLYAGVIVIEVIVVVAIWLFQRYFGS*
Ga0079037_1014339191	3300006224	Freshwater Wetlands	MSDTPPVAGETGDERSNTRLYAGVIVVEVLVLAGIWLFQRYFGS*
Ga0079037_1019077822	3300006224	Freshwater Wetlands	MNSTPLAAGETGVERDNTRVYAGVIMIEVLVLAGIWLFQRYFGS*
Ga0105105_100440063	3300009009	Freshwater Sediment	MSETRVTAGDAGEERDNTILYAGVIVVEVIVVVGIWLFQRYFGS*
Ga0105093_104263862	3300009037	Freshwater Sediment	MSETRVTAGGTGDERDNTRLYAGVIVVEVIIVVGIWLFQRYFGS*
Ga0105090_100917022	3300009075	Freshwater Sediment	MSETRVTAGEAGDERDNTRLYAGVIVVEVIVVVGIWLFQRYFGS*
Ga0105107_106480182	3300009087	Freshwater Sediment	MSETRVPAGDAGEERDNTRLYAGVIVVEMIVVFGIWMFQQYFGS*
Ga0102851_100286085	3300009091	Freshwater Wetlands	MSDTPPVAGETGDERDNTRLYASVIAVEVLVLAGIWLFQRYFGA*
Ga0102851_108294252	3300009091	Freshwater Wetlands	MSDTSPAAGETRDERNNTRVYAGVIALEVVVVVAIWLFQRYFGT*
Ga0102851_109485952	3300009091	Freshwater Wetlands	MSGTSPGAGETTDDRRNVRLYAGVIVVEVVVLIAIWLFQRYFGS*
Ga0102851_133380692	3300009091	Freshwater Wetlands	MSETDVTAGGTVPERDNTRLYAGVLVVEALVLSAIWLFQRYFGS*
Ga0115026_102705832	3300009111	Wetland	MTGMSPSADETTNDRRNVRLYAGVLVVEVLVLSAIWLFQRYFGS*
Ga0113563_125001192	3300009167	Freshwater Wetlands	MSDTLPPAGDAADERDNTRRYVGVIVVEVVVLTGIWLFQRYFGS*
Ga0113563_126741172	3300009167	Freshwater Wetlands	MSDTQQSAGEAMEDRDNTRLYAGVIVVEVVVLVAIWLFQRYFGS*
Ga0115028_101509552	3300009179	Wetland	MSGTSPGAGETTNDRRNVRLYAGVLVVEVLVLSAIWLFQRYFGS*
Ga0115028_118488291	3300009179	Wetland	MSETALTTSGRAGDEQDNTRLYVGVIVVEVLVLAGIWLFQRYFGS*
Ga0173609_108825372	3300013315	Sediment	MSDTRATGGGTRDERDSTRLYAGVIVVECVVLVAIWLFQRYFGSSS*
Ga0210376_11006892	3300022385	Estuarine	MTETPLNAGETTDQRHNVRLYAGVLVVEAVVLAAIWLFQRYFGA
Ga0209285_100219642	3300027726	Freshwater Sediment	MSETRVTAGDAGEERDNTILYAGVIVVEVIVVVGIWLFQRYFGS
Ga0209464_101770172	3300027778	Wetland Sediment	MSDAPFVAGEPVAERNNTRLYVGVIVVEVIVVLGIYLFQRYFGT
Ga0209373_102709712	3300027796	Freshwater	MSDTPPVAGEPVAERNNTRLYAGVIVVEVIVVAGIWLFQRYFGT
Ga0209262_100737302	3300027841	Freshwater	MSETRVTAGDAGEERDNTRLYAGVIVVEVIVVVGIWLFQRYFGS
Ga0209262_104835141	3300027841	Freshwater	SQERRPMSDTPPVAGEPVAERNNTRLYAGVIVVEVIVVAGIWFFQRYFGT
Ga0209798_100753912	3300027843	Wetland Sediment	MSDTPLVAGENGDERSNTRLYAGVIVVEVIVVTAIWLFQRYFGT
Ga0209798_101579822	3300027843	Wetland Sediment	VSGTSSSAGGITNERRNIRLYAGVLVVEVIVLVAIWLIQRYFGA
Ga0209397_101351452	3300027871	Wetland	MSETDVTAGGTVPERDNTRLYAGVLVVEALVLSAIWLFQRYFGS
Ga0209397_102561162	3300027871	Wetland	MSDTPPVAGETGDERDNTRLYASVIAVEVLVLAGIWLFQRYFGA
Ga0209397_103354241	3300027871	Wetland	MTDTLLQAGGAADEQAHTRRYVGVIVVEVLAVIGIWLVQRYFGS
Ga0209397_105622922	3300027871	Wetland	MSDTRVTAGDTGAERDNTRLYAGVIAVEAVVLVAIWLFQRYFGS
Ga0209293_101017742	3300027877	Wetland	MSDTPPVASETGDERNNTRLYAGVIVVEVLVLAGIWLFQRYFGA
Ga0209450_100009039	3300027885	Freshwater Lake Sediment	MSETRATAGGAGEERDNTRLYAGVIVVEVIVVVGIWLFQRYFGS
Ga0209450_107147812	3300027885	Freshwater Lake Sediment	MSDTRAAAGGTREERDNTRLYAGVIVVEVVVLVAIWLFQRYFGA
Ga0208980_102128042	3300027887	Wetland	MTGTSPAAGESGKAPDHVRLYAGVIVVEVIVLACIWMIQRYFGS
Ga0209254_1000282010	3300027897	Freshwater Lake Sediment	MSETRVTASDAVEERDNTRLYAGVILVEVIVVVGIWLIQRYFGS
Ga0209254_101847162	3300027897	Freshwater Lake Sediment	MSDTPLVAGEPVAERNNTLMYAGVLVVEVIVVAGIWFFQRYFGS
Ga0209254_102315652	3300027897	Freshwater Lake Sediment	MSDTPPVAGEPVAERNNTRLYAGVIVVQVIVVAGIWFFQRYFGS
Ga0209254_102340952	3300027897	Freshwater Lake Sediment	MSDTPLVAGEPVAERNNTRLYAGVIVVEVIVVAGIWFFQRYFGT
Ga0209254_108996372	3300027897	Freshwater Lake Sediment	MSETRVTATEAGEERDNTRLYAGVIVVQVIVVVGIWLFQRYFGS
Ga0209668_100190592	3300027899	Freshwater Lake Sediment	MSDIPLTAGEAANERDNTRLYAGVIVVEVIVLAAIWIFQRYFGL
Ga0209668_100552592	3300027899	Freshwater Lake Sediment	MSDTPPVAGEPVAERNNTRLYAGVIVVEVIVVAGIWLFQRYFGS
Ga0209253_100167601	3300027900	Freshwater Lake Sediment	MSDTPLVAGGTGDERSNTRLYAGVIVVEVIVVTAIWLFQRYFGT
Ga0209253_101960111	3300027900	Freshwater Lake Sediment	MSDTPPVAGEPVAERNNTRLYAGVIVVEVIVVAGIWLFQRYFG
Ga0315290_109019201	3300031834	Sediment	QERRPMSDTPLVAGEPVAERNNTRMYAGVIVVEVIVVAGIWLFQRYFGS
Ga0315278_105212822	3300031997	Sediment	MSDTPLVAGEPVAERNNTRMYAGVIVVEVIVVAGIWFFQRYFGS
Ga0315292_103043762	3300032143	Sediment	MSDTPIVAGEPVAERNNTRLYAGVIVVEVIVVAGIWFFQRYFGS
Ga0315292_103512262	3300032143	Sediment	MSDTPLVAGEPVAERNNTRMYAGVIVVEVIVVAGIWFFQRYFGT
Ga0315283_109018992	3300032164	Sediment	MSELPLVAGEPVAERNNTLMYAGVLVVEVIVVAGIWFFQRYFGS
Ga0315276_101057362	3300032177	Sediment	MSDTPIVAGEPVAERNNTRLYAGVIVVEVIVVAGIWFFQRYFGT
Ga0316604_108540091	3300033406	Soil	MSGTSPGAGETTNDRRNVRLYAGVIVVEVVVLIAIWLFQRYFGS
Ga0316605_100236904	3300033408	Soil	VSGTSPHAGGTADERYNARWYVGVIVVEVLVLAGIWLVQRYFGS
Ga0316605_100370852	3300033408	Soil	VSGTPSSAGSATNERRNVRLYAGVIVVEVVVLVAIWLFQRYFGT
Ga0316605_102485842	3300033408	Soil	MTGMSPSADETTNDRRNVRLYAGVLVVEVLVLSAIWLFQRYFGS
Ga0316605_103072102	3300033408	Soil	MSETQRSAGETVTERDNTRLYAGAIVVEAVVLAAIWLFQRYFGS
Ga0316605_104838172	3300033408	Soil	MSETAPTTSGRAGDEQDNTRLYVGVIVVEVLVLAGIWLFQRYFGS
Ga0316605_105697482	3300033408	Soil	MSETSQIPAGTGDERDNTRLYAGVIAVEVVVLVAIWLFQRYFGS
Ga0316605_105889132	3300033408	Soil	VSGTSPSDGETTNDRRNVRLYAGVLVVEVLVLSAIWLFQRYFGA
Ga0316605_108159641	3300033408	Soil	MSETSQIPAGTGDERDNTRLYAGVIAVEVVVLTAIWLFQRYFGS
Ga0316605_119424501	3300033408	Soil	MSDTRVTAGVTGEERNNTRLYAGVIVVEVVVLVAIWLFQRYFGS
Ga0316603_108004492	3300033413	Soil	MSDTPPVAGETGDERDNTRLYAGVIAVEVLVLAGIWLFQRYFGA
Ga0316603_117891641	3300033413	Soil	VKDAPVITGEPRAERDNARLYAGVIVIEVIVVVAIW
Ga0316603_121083092	3300033413	Soil	MNETSPSAGETGNERRNVRLYAGVLAVEALVLSAIWLFQRYFGS
Ga0316603_121110882	3300033413	Soil	MSETSPSAGETGNERRNVRLYAGVIAVEALVLSAIWLFQRYFGS
Ga0316619_118067272	3300033414	Soil	VKDAPVITGEPRAERDNTRLYAGVIVIEVIVVVAIWLFQRYFGS
Ga0316622_1000195742	3300033416	Soil	MSDTPPVAGETGDERNNTRLYAGVIVVEVLVLAGIWLFQRYFGS
Ga0316622_1001044554	3300033416	Soil	MSDTLPPAGDAADERDNTRRYVGVIVVEVVVLAGIWLFQRYFGS
Ga0316622_1003674312	3300033416	Soil	MSETPLQAGGALDERNNTRMYLGVIVVEVLVLVAIWWFQRHFGS
Ga0316622_1004668291	3300033416	Soil	MSETLLHAGGAADERDNTRRYVGVIVVEVVVLVGIWLFQRYFGS
Ga0316622_1006191632	3300033416	Soil	VKDAPVITGEPRAERDNARLYAGVIVIEVIVVVAIWLFQRYFGS
Ga0316622_1018171832	3300033416	Soil	MTDTSPPAGGTASELAHTRRYVGVIVVEVLVLIGIWLVQRYFGS
Ga0316622_1021977981	3300033416	Soil	VTDIRLKAAEHPEERNNTRLYAGVILVEVVVLAGIWFFQRYFGP
Ga0316625_1003801392	3300033418	Soil	MNETPRRAGEAAAERDNARLYAGVVAAEVVVLVAIWIFQRYFGA
Ga0316625_1010080712	3300033418	Soil	MNDTPLLGGEPVAERNNTRMYAGVIVVEVIVVAGIWLFQRYFGT
Ga0316601_1000771302	3300033419	Soil	MSVAQRSGGEAVTDRDNTRLYAGVIVVEAVVLVAIWLFQRYFGS
Ga0316601_1002421372	3300033419	Soil	AAAKERGTVSGTSPHAGGTADERYNARWYVGVIVVEVLVLAGIWLVQRYFGS
Ga0316613_107448321	3300033434	Soil	MSKTSQSPAGTGDERDNTRLYAGVIAVEVVVLTAIWLFQRYFGS
Ga0316627_1007729122	3300033482	Soil	MNETSPSAGETGNERRNVRLYAGVLVVEALVLSAIWLFQRYFGS
Ga0316627_1013221702	3300033482	Soil	MSETAPSAGGTENERRNVRLYGGVIVVEVVVLVAIWLFQRYFGS
Ga0316627_1017980642	3300033482	Soil	MSETALTTSGRAGDEQDNTRLYVGVIVVEVLVLAGIWLVQRYFGS
Ga0316627_1022537011	3300033482	Soil	VKDAPVITGEPRAERDNTRLYAGVIVIEVIVVVAIW
Ga0316629_106463462	3300033483	Soil	MSGTSPGAGETTNDRRNVRLYAGVLVVEVLVLSAIWLFQRYFGS
Ga0316629_110817142	3300033483	Soil	MSETGVTTGGTVPERNNTRLYAGVIVVEVVVLVAIWLLQRYFGS
Ga0316621_100446422	3300033488	Soil	MSDTLPPAGDAADERDNTRRYVGVIVVEVVVLVGIWLFQRYFGS
Ga0316621_101510242	3300033488	Soil	PMSDTPPVAGETGDERDNTRLYASVIAVEVLVLAGIWLFQRYFGA
Ga0316621_106478872	3300033488	Soil	MSDTSPAAGETRDERNNTRVYAGVIALEVVVVVAIWLFQRYF
Ga0316621_108034402	3300033488	Soil	MNETPRRAGEAVAERDNTRLYAGVVAAEVVVLVAIWLFQRYFGA
Ga0316616_1018995612	3300033521	Soil	MSDTLPPAGDAADERDNTRRYIGVIVVEVVVLAGIWLFQRYFGS
Ga0316616_1026690391	3300033521	Soil	VTPEPVPAGEPAADRDNTRLYVGVIVLEILVLAGIWLFQRYFGS
Ga0316616_1030442122	3300033521	Soil	MSEPQRGAGEAIAERDNSRLYAGVIAVEVVVLVAIWLFQRYFGA
Ga0316617_1005474982	3300033557	Soil	MNETPRRAGEAAAVRDNARLYAGVVAAEVVVLVAIWLFQRYFGA
Ga0373895_005579_1228_1362	3300034075	Sediment Slurry	MSDTPLVAGEPVADRNNTRMYAGVIVVEVIVVAGIWLFQRYFGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094067

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences