NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F094066

Metagenome Family F094066

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F094066
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 58 residues
Representative Sequence MTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPAEGGEPHLHDHEREFKL
Number of Associated Samples 81
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 91.51 %
% of genes near scaffold ends (potentially truncated) 8.49 %
% of genes from short scaffolds (< 2000 bps) 67.92 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (92.453 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(16.981 % of family members)
Environment Ontology (ENVO) Unclassified
(23.585 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(38.679 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 39.08%    β-sheet: 0.00%    Coil/Unstructured: 60.92%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF13193AMP-binding_C 4.72
PF03706LPG_synthase_TM 3.77
PF02954HTH_8 2.83
PF13229Beta_helix 2.83
PF00679EFG_C 2.83
PF03144GTP_EFTU_D2 2.83
PF01336tRNA_anti-codon 1.89
PF00871Acetate_kinase 1.89
PF12802MarR_2 1.89
PF14234DUF4336 1.89
PF02702KdpD 0.94
PF00753Lactamase_B 0.94
PF14748P5CR_dimer 0.94
PF00296Bac_luciferase 0.94
PF00067p450 0.94
PF03814KdpA 0.94
PF14559TPR_19 0.94
PF00027cNMP_binding 0.94
PF02771Acyl-CoA_dh_N 0.94
PF00148Oxidored_nitro 0.94
PF13660DUF4147 0.94
PF02545Maf 0.94
PF05683Fumerase_C 0.94
PF00501AMP-binding 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG0392Predicted membrane flippase AglD2/YbhN, UPF0104 familyCell wall/membrane/envelope biogenesis [M] 3.77
COG0282Acetate kinaseEnergy production and conversion [C] 1.89
COG3426Butyrate kinaseEnergy production and conversion [C] 1.89
COG04247-methyl-GTP pyrophosphatase and related NTP pyrophosphatases, Maf/HAM1 superfamilySecondary metabolites biosynthesis, transport and catabolism [Q] 0.94
COG1838Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domainEnergy production and conversion [C] 0.94
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.94
COG2060K+-transporting ATPase, KdpA subunitInorganic ion transport and metabolism [P] 0.94
COG2124Cytochrome P450Defense mechanisms [V] 0.94
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.94
COG2205K+-sensing histidine kinase KdpDSignal transduction mechanisms [T] 0.94
COG2710Nitrogenase Mo-Fe protein NifD/coenzyme F430 biosynthesis subunit CfbDCoenzyme transport and metabolism [H] 0.94


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.45 %
UnclassifiedrootN/A7.55 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003852|Ga0031655_10279095All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30625Open in IMG/M
3300003994|Ga0055435_10093783All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30785Open in IMG/M
3300003995|Ga0055438_10071851All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30935Open in IMG/M
3300004004|Ga0055451_10301748All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30659Open in IMG/M
3300004027|Ga0055459_10047428All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR301018Open in IMG/M
3300005077|Ga0071116_1001548All Organisms → cellular organisms → Bacteria → Proteobacteria34266Open in IMG/M
3300005183|Ga0068993_10343110All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30545Open in IMG/M
3300005204|Ga0068997_10113312All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30596Open in IMG/M
3300005206|Ga0068995_10136643All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30525Open in IMG/M
3300005332|Ga0066388_100135865All Organisms → cellular organisms → Bacteria3013Open in IMG/M
3300005332|Ga0066388_101515434All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR301174Open in IMG/M
3300005332|Ga0066388_107762336All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30537Open in IMG/M
3300005538|Ga0070731_10319378All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR301031Open in IMG/M
3300005843|Ga0068860_102721837All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30513Open in IMG/M
3300006041|Ga0075023_100580501All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30518Open in IMG/M
3300006224|Ga0079037_100045176All Organisms → cellular organisms → Bacteria3399Open in IMG/M
3300006224|Ga0079037_100379518All Organisms → cellular organisms → Bacteria1333Open in IMG/M
3300006224|Ga0079037_100837917All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30904Open in IMG/M
3300006224|Ga0079037_101255111All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30737Open in IMG/M
3300006224|Ga0079037_102061528All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30570Open in IMG/M
3300006865|Ga0073934_10044010All Organisms → cellular organisms → Bacteria3989Open in IMG/M
3300009089|Ga0099828_11623690All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30569Open in IMG/M
3300009091|Ga0102851_10594704All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR301155Open in IMG/M
3300009091|Ga0102851_10623045All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR301130Open in IMG/M
3300009167|Ga0113563_10125721Not Available2415Open in IMG/M
3300009167|Ga0113563_11090511All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30924Open in IMG/M
3300009506|Ga0118657_10000153All Organisms → cellular organisms → Bacteria → Proteobacteria108363Open in IMG/M
3300009506|Ga0118657_10299527All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR302164Open in IMG/M
3300009792|Ga0126374_10110347All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR301584Open in IMG/M
3300010379|Ga0136449_100185280All Organisms → cellular organisms → Bacteria3995Open in IMG/M
3300010379|Ga0136449_100897165All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR301445Open in IMG/M
3300010391|Ga0136847_12233058All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30598Open in IMG/M
3300010391|Ga0136847_12776735All Organisms → cellular organisms → Bacteria6521Open in IMG/M
3300010400|Ga0134122_10974038All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300010401|Ga0134121_10018591All Organisms → cellular organisms → Bacteria5543Open in IMG/M
3300010938|Ga0137716_10004961All Organisms → cellular organisms → Bacteria30482Open in IMG/M
3300010938|Ga0137716_10063634All Organisms → cellular organisms → Bacteria3334Open in IMG/M
3300012202|Ga0137363_11563953All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30551Open in IMG/M
3300012923|Ga0137359_10922652All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30752Open in IMG/M
3300012931|Ga0153915_10183199Not Available2290Open in IMG/M
3300012931|Ga0153915_12105440All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30660Open in IMG/M
3300015164|Ga0167652_1000175All Organisms → cellular organisms → Bacteria20630Open in IMG/M
3300017927|Ga0187824_10039602All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR301436Open in IMG/M
3300017930|Ga0187825_10150610Not Available822Open in IMG/M
3300017936|Ga0187821_10327877All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30613Open in IMG/M
3300017939|Ga0187775_10526746All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30507Open in IMG/M
3300017959|Ga0187779_11133725All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30548Open in IMG/M
3300017973|Ga0187780_10266626All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR301201Open in IMG/M
3300018009|Ga0187884_10000962All Organisms → cellular organisms → Bacteria27426Open in IMG/M
3300018058|Ga0187766_10623615All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30738Open in IMG/M
3300019458|Ga0187892_10002784All Organisms → cellular organisms → Bacteria33720Open in IMG/M
3300020147|Ga0196976_1008795All Organisms → cellular organisms → Bacteria2744Open in IMG/M
3300025310|Ga0209172_10065181All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR302195Open in IMG/M
3300025538|Ga0210132_1034808All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30723Open in IMG/M
3300025549|Ga0210094_1078217All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30611Open in IMG/M
3300025790|Ga0210075_1067490All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30615Open in IMG/M
3300027645|Ga0209117_1006405All Organisms → cellular organisms → Bacteria4025Open in IMG/M
3300027815|Ga0209726_10352537All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30700Open in IMG/M
3300027819|Ga0209514_10151043All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR301244Open in IMG/M
3300027869|Ga0209579_10332921All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30820Open in IMG/M
3300027871|Ga0209397_10470923All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30621Open in IMG/M
3300027877|Ga0209293_10365521All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30743Open in IMG/M
3300027900|Ga0209253_10812673All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30663Open in IMG/M
3300027902|Ga0209048_10009488All Organisms → cellular organisms → Bacteria8804Open in IMG/M
3300027905|Ga0209415_10005413All Organisms → cellular organisms → Bacteria22967Open in IMG/M
3300027910|Ga0209583_10646857All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30544Open in IMG/M
(restricted) 3300028043|Ga0233417_10584074All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30530Open in IMG/M
3300028381|Ga0268264_11945019All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30597Open in IMG/M
3300031235|Ga0265330_10016731All Organisms → cellular organisms → Bacteria3380Open in IMG/M
3300031235|Ga0265330_10061686All Organisms → cellular organisms → Bacteria → Nitrospirae1631Open in IMG/M
3300031242|Ga0265329_10128998All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30813Open in IMG/M
3300031367|Ga0307440_1213243All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30521Open in IMG/M
3300031511|Ga0307424_1282253Not Available507Open in IMG/M
3300031576|Ga0247727_10584401All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30844Open in IMG/M
3300031699|Ga0315535_1040789All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR301888Open in IMG/M
3300031949|Ga0214473_10001606All Organisms → cellular organisms → Bacteria29417Open in IMG/M
3300031949|Ga0214473_11439649All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30698Open in IMG/M
3300032160|Ga0311301_11014167All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR301095Open in IMG/M
3300032163|Ga0315281_10038236All Organisms → cellular organisms → Bacteria5988Open in IMG/M
3300032173|Ga0315268_10078642All Organisms → cellular organisms → Bacteria3107Open in IMG/M
3300032173|Ga0315268_10281298Not Available1607Open in IMG/M
3300032173|Ga0315268_10343586All Organisms → cellular organisms → Bacteria1452Open in IMG/M
3300032173|Ga0315268_11016545All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30835Open in IMG/M
3300032256|Ga0315271_11223992All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30649Open in IMG/M
3300032342|Ga0315286_10118506All Organisms → cellular organisms → Bacteria2839Open in IMG/M
3300032342|Ga0315286_10330685Not Available1610Open in IMG/M
3300032770|Ga0335085_10811331All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR301029Open in IMG/M
3300032770|Ga0335085_10883616All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30976Open in IMG/M
3300032770|Ga0335085_11671715All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30657Open in IMG/M
3300032782|Ga0335082_10003581All Organisms → cellular organisms → Bacteria16915Open in IMG/M
3300032829|Ga0335070_10049503All Organisms → cellular organisms → Bacteria4635Open in IMG/M
3300032829|Ga0335070_10054636All Organisms → cellular organisms → Bacteria4372Open in IMG/M
3300032829|Ga0335070_10077528Not Available3548Open in IMG/M
3300032829|Ga0335070_11558485All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30601Open in IMG/M
3300032892|Ga0335081_11534034All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30736Open in IMG/M
3300032893|Ga0335069_10008211All Organisms → cellular organisms → Bacteria14971Open in IMG/M
3300032893|Ga0335069_10055454All Organisms → cellular organisms → Bacteria5172Open in IMG/M
3300033004|Ga0335084_10408130Not Available1399Open in IMG/M
3300033402|Ga0326728_10040702All Organisms → cellular organisms → Bacteria7261Open in IMG/M
3300033407|Ga0214472_10643846All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30969Open in IMG/M
3300033408|Ga0316605_11909997All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300033414|Ga0316619_11879927All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30543Open in IMG/M
3300033416|Ga0316622_102303173All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30623Open in IMG/M
3300033480|Ga0316620_10253005All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR301510Open in IMG/M
3300033488|Ga0316621_10989420All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR30626Open in IMG/M
3300033521|Ga0316616_100065696All Organisms → cellular organisms → Bacteria2957Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil16.98%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands9.43%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment8.49%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands8.49%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.77%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.77%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment2.83%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.83%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil2.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.83%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere2.83%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland1.89%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment1.89%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.89%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater1.89%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh1.89%
Mangrove SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment1.89%
Hot Spring Fe-Si SedimentEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral → Hot Spring Fe-Si Sediment1.89%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment1.89%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.89%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.89%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.89%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.94%
SinkholeEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Sinkhole0.94%
Salt Marsh SedimentEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment0.94%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.94%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.94%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.94%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.94%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze0.94%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.94%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003852Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HBEnvironmentalOpen in IMG/M
3300003994Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300003995Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2EnvironmentalOpen in IMG/M
3300004004Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWB_D2EnvironmentalOpen in IMG/M
3300004027Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLC_D2EnvironmentalOpen in IMG/M
3300005077Water filled karst sinkhole microbial communities from Little Salt Spring, North Port, Florida - Phototrophic mat 2014EnvironmentalOpen in IMG/M
3300005183Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300005204Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2EnvironmentalOpen in IMG/M
3300005206Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006224Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaGEnvironmentalOpen in IMG/M
3300006865Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009506Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010938Sediment microbial community from Chocolate Pots hot springs, Yellowstone National Park, Wyoming, USA. Combined Assembly of Gp0156111, Gp0156114, Gp0156117EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300015164Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface)EnvironmentalOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300020147Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5-13CEnvironmentalOpen in IMG/M
3300025310Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025538Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025549Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025790Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027815Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027819Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027871Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027877Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300027902Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300028043 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MGEnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031235Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaGHost-AssociatedOpen in IMG/M
3300031242Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaGHost-AssociatedOpen in IMG/M
3300031367Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-10EnvironmentalOpen in IMG/M
3300031511Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-20EnvironmentalOpen in IMG/M
3300031576Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25EnvironmentalOpen in IMG/M
3300031699Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-20EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033488Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_CEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ga0031655_1027909513300003852Freshwater Lake SedimentMTTDEKLKLAVSVARAAAHSGEYRRLDKLIEIVFRKLNELAPAELGEPHLHDHEREFKL*
Ga0055435_1009378323300003994Natural And Restored WetlandsMTTDEKLKLAVSVARAAARSGEYRRLEKLIEVVFRKLNELAPSDSGEMHLQEHDRDFKL*
Ga0055438_1007185113300003995Natural And Restored WetlandsMTTDEKLKLAVSVARAAAHSGEYRRLDKLIETVFRKLNELAPPESSEGPLHDHDREFKL*
Ga0055451_1030174823300004004Natural And Restored WetlandsMTTDEKLRLAVSVARAAAHSGEYRRLDKLIEIVFRKLNELAPAGGEGGPHDGEPEHEKEFKL*
Ga0055459_1004742823300004027Natural And Restored WetlandsMTTDEKLKLAVSVARAAAQSGEYRRLDKLIEVVFRKLNELSPPELGEPHVHDHDREFKL*
Ga0071116_1001548163300005077SinkholeMTTDEKLKLAVSVARAAARSGEYRRLDTLIEVVFRKLNELAPPEAEPHDHDREFKL*
Ga0068993_1034311013300005183Natural And Restored WetlandsEQRMTTDEKLKLAVSVARAAAQSGEYRRLDKLIELVFRKLNELSPPELAEPHVHDHDREFKL*
Ga0068997_1011331213300005204Natural And Restored WetlandsMTTDEKLKLAVSVARAAARSGEYRRLEKLIEVVFRKLNELAPSDSSEIHLQDHDRDFKL*
Ga0068995_1013664313300005206Natural And Restored WetlandsMTTDEKLKLAVSVARAAARSGEYRRLEKLIEVVFRKLNELAPSDSGDMHLQEHDRDFKL*
Ga0066388_10013586513300005332Tropical Forest SoilAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPVELGEAHEHDRDFKL*
Ga0066388_10151543413300005332Tropical Forest SoilMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPVELGEAHEHERDFKL*
Ga0066388_10776233613300005332Tropical Forest SoilMTRDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPGDSADPHQQEHEREFKL*
Ga0070731_1031937823300005538Surface SoilMTTDEKLKLAVSVARAAAHSGEYRRLDKLIEIVFRKLNELAPSDTAEAHEHDREFKL*
Ga0068860_10272183713300005843Switchgrass RhizosphereMTTDEKLKLAVSVARAAAQSGEYRRLDKLIEVVFRKLNELSPPELPESHVHDHDREFKL*
Ga0075023_10058050123300006041WatershedsMTTDEKLKLAVSVARAAARSGEYRRLEKLIEVVFRKLNELAPSESGEMHLQDHDRDFKL*
Ga0079037_10004517633300006224Freshwater WetlandsMAQEGCMTSDEKLKLAVSVARAAARSGEYRRLDTLIEMVFRKLNELAPPEPTELHEPEREFKL*
Ga0079037_10037951823300006224Freshwater WetlandsMTRDDKLKLAVSVARAAAASGEYRQLDKLIEIVFRKLNELAPAEGGEPHLHDHDREFKL*
Ga0079037_10083791723300006224Freshwater WetlandsKLAVSVARAAARSGEYRRLDTLIEVVFRKLNELAPSEPEIHDHERDFKL*
Ga0079037_10125511113300006224Freshwater WetlandsMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELVPSEGAEPHIHDREF
Ga0079037_10206152813300006224Freshwater WetlandsMTTDEKLKLAVSVARAAARSGEYRQLDKLIEIVFRKLNELIPPESGEPHLHEHDREFKL*
Ga0073934_1004401033300006865Hot Spring SedimentMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELVPPDGGEAQLHEHDREFKL*
Ga0099828_1162369013300009089Vadose Zone SoilMTTDDKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPPESAEPHVQEREFKL*
Ga0102851_1059470433300009091Freshwater WetlandsMTSDEKLKLAVSVARAAARSGEYRRLDTLIEMVFRKLNELAPPEPTELHEPEREFKL*
Ga0102851_1062304523300009091Freshwater WetlandsMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELVPSEGAEPHIHDREFKL*
Ga0113563_1012572133300009167Freshwater WetlandsMTTDDKLKLAVSVACAAAHSGEHRRLDTLIELVFRKLNELDPPEHSALHEADREFNL*
Ga0113563_1109051123300009167Freshwater WetlandsMMTTDEKLKLAVSVARAAARSGEYRQLDKLIEIVFRKLNELIPPESGEPHLHEHDREFKL
Ga0118657_1000015393300009506Mangrove SedimentMMTRDDKLKLAVSVARAAAGSGEYRQLDKLIEVVFRKLNELAPAEGGEPHLHDHDREFRL
Ga0118657_1029952723300009506Mangrove SedimentMTTDEKLRLAVSVARAAAHSGEYRRLDKLIEIVFRKLNELAPAGGESGPHDGEPEHEKEFKL*
Ga0126374_1011034733300009792Tropical Forest SoilMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPVELGEAHEHDRDFKL*
Ga0136449_10018528033300010379Peatlands SoilMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPPEAGELHLQEHDREFKL*
Ga0136449_10089716523300010379Peatlands SoilMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELVPPEVESQLHEHEREFKL*
Ga0136847_1223305813300010391Freshwater SedimentMTTDEKLKLAVSVARAAAHSGEYRRLDKLIEIVFRKLNELAPPESSEGPLHDHDREFKL*
Ga0136847_1277673523300010391Freshwater SedimentMTADEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPPDSAEIHLQEHEREFKL*
Ga0134122_1097403823300010400Terrestrial SoilMTTDEKLKLAVSVARAAAQSGEYRRLDKLIEMVFRKLNELSPPEMAEPHVHDHDREFKL*
Ga0134121_1001859123300010401Terrestrial SoilMTTDEKLKLAVSVARAAAHSGEYRRLDKLIEIVFRKLNQLAPSDSTETHEHDRDFKL*
Ga0137716_1000496153300010938Hot Spring Fe-Si SedimentMGRRREAMTADEKLRLAVSVARAAAHSGEYRRLDKLIEIVYRKLNELAPPHTETTSEPERDFRL*
Ga0137716_1006363433300010938Hot Spring Fe-Si SedimentMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPADGEPHLRDQEREFKL*
Ga0137363_1156395323300012202Vadose Zone SoilMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPPEAAAPHLHDGDHEFKL*
Ga0137359_1092265223300012923Vadose Zone SoilMTTDEKLRLAVGVARAAAHSGEYRRLDKLIEIVFRKLNELNPIHHDGPEADREFRL*
Ga0153915_1018319923300012931Freshwater WetlandsMTTDEKLRLAVSVARAAAHSGEYRRLDKLIEIVFRKLNELAPSGGESGPHDGEPEHEKEFKL*
Ga0153915_1210544023300012931Freshwater WetlandsMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPAEGEPQLHEHEREFKL*
Ga0167652_100017533300015164Glacier Forefield SoilMTTDDKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPSDGPEPHLHDREFKL*
Ga0187824_1003960233300017927Freshwater SedimentMTSDEKLRLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPTDRGDLPLHDHDHDRDFK
Ga0187825_1015061013300017930Freshwater SedimentMTSDDKLKLAVSVARAAARSGEYRRLVKLIEIVFRKLNELAPTDRGDLPLHDHDHDRDFK
Ga0187821_1032787713300017936Freshwater SedimentMTSDDKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELSPPEGGEPHLHEHDREFKL
Ga0187775_1052674623300017939Tropical PeatlandMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPSDGGEPHDREFKL
Ga0187779_1113372523300017959Tropical PeatlandMTSDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPSESGDIHLQE
Ga0187780_1026662623300017973Tropical PeatlandMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELVPPDAEAPLHDHEREFKL
Ga0187884_1000096243300018009PeatlandMTTDEKLKLAVSVARAAAHSGEYRRLDKLIEIVFRKLNELAPAELGEPHLHDHEREFKL
Ga0187766_1062361523300018058Tropical PeatlandMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPEGSEAHDRDRDFKL
Ga0187892_10002784123300019458Bio-OozeMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPSDEVHDREFKL
Ga0196976_100879533300020147SoilMTRDEKLRLAVSVARAAAHSGEYRRLDKLIDIVFRKLEQLSPEDDPRQQERDFKF
Ga0209172_1006518123300025310Hot Spring SedimentMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELVPPDGGEAQLHEHDREFKL
Ga0210132_103480823300025538Natural And Restored WetlandsMTTDEKLKLAVSVARAAAQSGEYRRLDKLIELVFRKLNELSPPELAEPHVHDHDREFKL
Ga0210094_107821713300025549Natural And Restored WetlandsMTTDEKLKLAVSVARAAAHSGEYRRLDKLIETVFRKLNELAPPESSEGPLHDHDREFKL
Ga0210075_106749023300025790Natural And Restored WetlandsMTTDEKLKLAVSVARAAAQSGEYRRLDKLIEVVFRKLNELSPPELGEPHVHDHDREFKL
Ga0209117_100640533300027645Forest SoilMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPSESTEPHLHDRDFKL
Ga0209726_1035253723300027815GroundwaterMTTDEKLKLAVSVARAAARSGEYRRLDKLIEVIFRKLNELAPSDAGEPHLHEHEREFKL
Ga0209514_1015104323300027819GroundwaterMTTDEKLRLAVSVARAAAHSGEYRRLDKLIEIVFRKLNELAPADLEGHDADRDFKM
Ga0209579_1033292123300027869Surface SoilMTTDEKLKLAVSVARAAAHSGEYRRLDKLIEIVFRKLNELAPSDTAEAHEHDREFKL
Ga0209397_1047092323300027871WetlandMAQEGCMTSDEKLKLAVSVARAAARSGEYRRLDTLIEMVFRKLNELAPPEPTELHEPEREFKL
Ga0209293_1036552123300027877WetlandMTRDDKLKLAVSVARAAAASGEYRQLDKLIEIVFRKLNELAPAEGGEPHLHDHDREFKL
Ga0209253_1081267313300027900Freshwater Lake SedimentMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELVPSEGAEPHIHDREFKL
Ga0209048_1000948893300027902Freshwater Lake SedimentMTTDEKLKLAVSVARAAARSGEYRRLEKLIEIVFRKLNELAPSESSEMHLQDHDRDFKL
Ga0209415_1000541353300027905Peatlands SoilMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPPEAGELHLQEHDREFKL
Ga0209583_1064685723300027910WatershedsMTTDEKLKLAVSVARAAARSGEYRRLEKLIEVVFRKLNELAPSESGEMHLQDHDRDFKL
(restricted) Ga0233417_1058407423300028043SedimentMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIIFRKLNDLAPPEAGEPHLHEHDREFKL
Ga0268264_1194501913300028381Switchgrass RhizosphereMTTDEKLKLAVSVARAAAQSGEYRRLDKLIEVVFRKLNELSPPELPESHVHDHDREFKL
Ga0265330_1001673143300031235RhizosphereMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELVPSDAGESHEHDRDFKL
Ga0265330_1006168633300031235RhizosphereMTTDEKLKLAVSVARAAAHSGEYRRLDKLIEIVFRKLNELAPSDTADTHEHDREFKL
Ga0265329_1012899823300031242RhizosphereTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELVPSDAGESHEHDRDFKL
Ga0307440_121324313300031367Salt MarshMTTDEKLRLAVSVARAAAHSGEYRRLDKLIEIVFRKLNELAPPRAEGEPDDGEPEHEREFKL
Ga0307424_128225313300031511Salt MarshMTTDEKLRLAVSVARAAAHSGEYRRLDKLIDVIYRKLNQISPGDSSEAPQEQERDFRL
Ga0247727_1058440123300031576BiofilmKLAVSVARAAARSGEYRRLDRLIEVVFRKLNELAPSEVGEIHLHEHEREFKL
Ga0315535_104078923300031699Salt Marsh SedimentMTTDEKLRLAVSVARAAAHSGEYRRLDKLIEIVFRKLNELAPPGAEGEPHDGEPEHEREFKL
Ga0214473_1000160693300031949SoilMTTDDRLRLAVSVARAAARSGEYRQLDKLIEIVFRKLNELVPPEGGEPHVHDREFKL
Ga0214473_1143964923300031949SoilMTRDEKLQLAVSVARAAARSGEYRQLDKLIEIVFRKLNELVPPEGDEPHLHDHDREFKL
Ga0311301_1101416713300032160Peatlands SoilMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELVPPEVESQLHEHEREFKL
Ga0315281_1003823653300032163SedimentMTTDDKLKLAVSVARAAAHSGEYRRLDKLIEIVFRKLNELAPPESEPHVHEHDREFKL
Ga0315268_1007864223300032173SedimentMTTDEKLKLAVSVARAAAHSGEYRRLDKLIEIVFRKLNELVPPESDLHVHDHDREFKL
Ga0315268_1028129823300032173SedimentMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPSEGSELHLHDHEREFKL
Ga0315268_1034358623300032173SedimentMTTDEKLKLAVSVARAAAQSGEYRRLDKLIEIVFRKLNELAPPESEPHVHEHEREFKL
Ga0315268_1101654523300032173SedimentMTVDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPSEGGDLHLHDHEREFKL
Ga0315271_1122399223300032256SedimentVSVACAAARSGEYRRLDKLIEIVFRKLNQLAPPDSSEVPLHDHDREFKL
Ga0315286_1011850623300032342SedimentMTTDDKLKLAVSVARAAAHSGEYRRLDKLIETVFRKLNELAPPESEPHVHEHDREFKL
Ga0315286_1033068523300032342SedimentMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPAEAGELHLHDHEKEFKL
Ga0335085_1081133123300032770SoilMTTDEKLKLAVSVARAAARSGEYRRLEKLIEVVFRKLNELAPSEAGESPLQDHDRDFKL
Ga0335085_1088361623300032770SoilMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELVPAEGAEPHLHEHDREFKL
Ga0335085_1167171513300032770SoilMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPSDATESHEHDREFKL
Ga0335082_10003581133300032782SoilMTTDDKLRLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPSESSEHHLHEQEREFKL
Ga0335070_1004950353300032829SoilMTTDEKLRLAVSVARAAAHSGEYRRLDKLIEIVFRKLNELAPPETSEHDREFKL
Ga0335070_1005463663300032829SoilMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELSPSESEPALHEHEREFKL
Ga0335070_1007752823300032829SoilMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPAEGGEPHLHDHEREFKL
Ga0335070_1155848523300032829SoilMTTDEKLRLAVSVARAAAHSGEYRRLDKLIEIVFHKLNELAPPESSELQEHDREFKL
Ga0335081_1153403413300032892SoilMTTDEKLKLAVSVARAAAGSGEYRRLDKLIEVVFRKLNELAPADGGEARERDRDFKL
Ga0335069_10008211153300032893SoilMTSDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELSPDDSGEPHLHEHDREFKL
Ga0335069_1005545473300032893SoilMTSDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPPESSEIHLQEHDRDFKL
Ga0335084_1040813033300033004SoilMTTDEKLKLAVSVARAAARSGEYRRLEKLIEVVFRKLNELAPPDSGEIHLQDHDRDFKL
Ga0326728_1004070243300033402Peat SoilMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPSEGGELHLHDHEREFKL
Ga0214472_1064384623300033407SoilMTTDEKLKLAVSVARAAARSGEYRRLDKLIEIVFRKLNELAPSDTNDLPLQEHDREFKL
Ga0316605_1190999713300033408SoilMTTDEKLKLAVSVARAAARSGEYRQLDKLIEIVFRKLNELIPPESGEPHLHEHDREFKL
Ga0316619_1187992723300033414SoilLAVSVARAAARSGEYRRLDTLIEMVFRKLNELAPPEPTELHEPEREFKL
Ga0316622_10230317323300033416SoilMTSDEKLKLAVSVARAAARSGEYRRLDLLIEVVFRKLNELAPSEAAEPNVPEREFKL
Ga0316620_1025300533300033480SoilMTTDEKLRLAVSVARAAAHSGEYRRLDKLIEIVFRKLNELAPSGGESGPHDGEPEHEKEFKL
Ga0316621_1098942013300033488SoilMTSDEKLKLAVSVARAAARSGEYRRLDKLIEVVFRKLNELAPSEAAEPNVPEREFKL
Ga0316616_10006569633300033521SoilMTSDEKLKLAVSVARAAARSGEYRRLDTLIEMVFRKLNELAPPEPTELHEPEREFKL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.