Metagenome Family F094023

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094023
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	106 residues
Representative Sequence	VLKIWTAIKLLPEDQSGAKVVKLPLVGKALSGRRAVFLIGLAAIGCGLVGTFVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Number of Associated Samples	92
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.89 %
% of genes near scaffold ends (potentially truncated)	91.51 %
% of genes from short scaffolds (< 2000 bps)	96.23 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (10.377 % of family members)
Environment Ontology (ENVO)	Unclassified (36.792 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.943 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 11.00% Coil/Unstructured: 39.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF01797	Y1_Tnp	4.72
PF01904	DUF72	1.89
PF03486	HI0933_like	1.89
PF13564	DoxX_2	0.94
PF05995	CDO_I	0.94
PF01479	S4	0.94
PF09720	Unstab_antitox	0.94
PF14903	WG_beta_rep	0.94
PF04264	YceI	0.94
PF10518	TAT_signal	0.94
PF01425	Amidase	0.94
PF03807	F420_oxidored	0.94
PF13419	HAD_2	0.94
PF13683	rve_3	0.94
PF12704	MacB_PCD	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	4.72
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	3.77
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	3.77
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	1.89
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	1.89
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	1.89
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.89
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	1.89
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	1.89
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	1.89
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	1.89
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	1.89
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	1.89
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	1.89
COG5553	Predicted metal-dependent enzyme of the double-stranded beta helix superfamily	General function prediction only [R]	0.94
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.94
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	91.51 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.77 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.89 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.89 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.94 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.77 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.89 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.89 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.77 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	1.89 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.89 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.77 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	1.89 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.89 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.77 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.89 %
Cutibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Cutibacterium	0.94 %
Aureliella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Aureliella	0.94 %
Anatilimnocola	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola	0.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.77 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.89 %
Cutibacterium avidum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Cutibacterium → Cutibacterium avidum	0.94 %
Aureliella helgolandensis	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Aureliella → Aureliella helgolandensis	0.94 %
Anatilimnocola floriformis	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola → Anatilimnocola floriformis	0.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.94 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|FZY7DQ102HV80X	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
2170459009\|GA8DASG02I2N2D	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
2228664022\|INPgaii200_c0585260	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1051389	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300000955\|JGI1027J12803_103665455	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300004153\|Ga0063455_100815772	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300004633\|Ga0066395_10201672	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300005167\|Ga0066672_10676954	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300005187\|Ga0066675_10689626	All Organisms → cellular organisms → Bacteria → Acidobacteria	767	Open in IMG/M
3300005294\|Ga0065705_10122906	All Organisms → cellular organisms → Bacteria → Acidobacteria	2853	Open in IMG/M
3300005341\|Ga0070691_10622038	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300005353\|Ga0070669_100356244	All Organisms → cellular organisms → Bacteria → Acidobacteria	1189	Open in IMG/M
3300005365\|Ga0070688_100209217	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola → Anatilimnocola floriformis	1369	Open in IMG/M
3300005365\|Ga0070688_101593963	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300005437\|Ga0070710_10522748	All Organisms → cellular organisms → Bacteria → Acidobacteria	816	Open in IMG/M
3300005445\|Ga0070708_102027115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Cutibacterium → Cutibacterium avidum	533	Open in IMG/M
3300005451\|Ga0066681_10620240	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300005459\|Ga0068867_100739590	All Organisms → cellular organisms → Bacteria → Acidobacteria	872	Open in IMG/M
3300005468\|Ga0070707_102009613	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300005468\|Ga0070707_102127900	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300005471\|Ga0070698_101204184	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300005543\|Ga0070672_100851362	All Organisms → cellular organisms → Bacteria → Acidobacteria	804	Open in IMG/M
3300005545\|Ga0070695_101801353	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300005560\|Ga0066670_10133036	All Organisms → cellular organisms → Bacteria → Acidobacteria	1435	Open in IMG/M
3300005615\|Ga0070702_101314335	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300005616\|Ga0068852_102416979	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300005842\|Ga0068858_101646153	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300006237\|Ga0097621_100939928	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300006794\|Ga0066658_10482637	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300006800\|Ga0066660_10297645	All Organisms → cellular organisms → Bacteria → Acidobacteria	1286	Open in IMG/M
3300006806\|Ga0079220_10991630	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	665	Open in IMG/M
3300006871\|Ga0075434_101886743	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300006881\|Ga0068865_100655423	All Organisms → cellular organisms → Bacteria → Acidobacteria	893	Open in IMG/M
3300006904\|Ga0075424_100963986	All Organisms → cellular organisms → Bacteria → Acidobacteria	909	Open in IMG/M
3300006914\|Ga0075436_100884666	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	667	Open in IMG/M
3300009093\|Ga0105240_12518415	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300009148\|Ga0105243_11729104	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300009177\|Ga0105248_11173343	All Organisms → cellular organisms → Bacteria → Acidobacteria	868	Open in IMG/M
3300010043\|Ga0126380_11855940	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300010046\|Ga0126384_12079296	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300010046\|Ga0126384_12136699	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300010322\|Ga0134084_10272744	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300010337\|Ga0134062_10255986	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	816	Open in IMG/M
3300010359\|Ga0126376_10492580	All Organisms → cellular organisms → Bacteria → Acidobacteria	1132	Open in IMG/M
3300010366\|Ga0126379_11063038	All Organisms → cellular organisms → Bacteria → Acidobacteria	915	Open in IMG/M
3300010373\|Ga0134128_12386847	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300010397\|Ga0134124_12680929	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300010398\|Ga0126383_11089628	All Organisms → cellular organisms → Bacteria → Acidobacteria	888	Open in IMG/M
3300010399\|Ga0134127_10113504	All Organisms → cellular organisms → Bacteria	2399	Open in IMG/M
3300010399\|Ga0134127_12502449	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300010400\|Ga0134122_12122349	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300010400\|Ga0134122_12522474	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300010403\|Ga0134123_10149189	All Organisms → cellular organisms → Bacteria → Acidobacteria	1932	Open in IMG/M
3300010403\|Ga0134123_10388058	All Organisms → cellular organisms → Bacteria → Acidobacteria	1276	Open in IMG/M
3300012205\|Ga0137362_10073897	All Organisms → cellular organisms → Bacteria	2828	Open in IMG/M
3300012232\|Ga0137435_1030719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1554	Open in IMG/M
3300012479\|Ga0157348_1025652	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300012582\|Ga0137358_10621326	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300012668\|Ga0157216_10415149	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300012929\|Ga0137404_10593605	All Organisms → cellular organisms → Bacteria → Acidobacteria	995	Open in IMG/M
3300012929\|Ga0137404_11000547	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300012930\|Ga0137407_12043973	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300012948\|Ga0126375_10091569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1773	Open in IMG/M
3300012948\|Ga0126375_10369350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1025	Open in IMG/M
3300012951\|Ga0164300_10222929	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300012989\|Ga0164305_11453346	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300013102\|Ga0157371_10977748	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300013297\|Ga0157378_10213150	All Organisms → cellular organisms → Bacteria → Acidobacteria	1832	Open in IMG/M
3300013306\|Ga0163162_10641304	All Organisms → cellular organisms → Bacteria → Acidobacteria	1186	Open in IMG/M
3300013306\|Ga0163162_11362618	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300013306\|Ga0163162_13453218	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300013308\|Ga0157375_12361269	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300013308\|Ga0157375_13321631	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300015248\|Ga0180079_1020579	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300015357\|Ga0134072_10430802	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300015372\|Ga0132256_101855955	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300015372\|Ga0132256_103003436	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300015373\|Ga0132257_101058720	All Organisms → cellular organisms → Bacteria → Acidobacteria	1022	Open in IMG/M
3300015373\|Ga0132257_102327288	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300017792\|Ga0163161_11902427	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300018000\|Ga0184604_10178372	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300018061\|Ga0184619_10494949	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300018083\|Ga0184628_10026808	All Organisms → cellular organisms → Bacteria → Acidobacteria	2862	Open in IMG/M
3300018481\|Ga0190271_11934752	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300019874\|Ga0193744_1026861	All Organisms → cellular organisms → Bacteria → Acidobacteria	1082	Open in IMG/M
3300025898\|Ga0207692_10443797	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Aureliella → Aureliella helgolandensis	816	Open in IMG/M
3300025907\|Ga0207645_10449375	All Organisms → cellular organisms → Bacteria → Acidobacteria	870	Open in IMG/M
3300025923\|Ga0207681_10352103	All Organisms → cellular organisms → Bacteria → Acidobacteria	1179	Open in IMG/M
3300025931\|Ga0207644_10681674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300025936\|Ga0207670_11111550	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300025938\|Ga0207704_11758522	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300025961\|Ga0207712_10198946	All Organisms → cellular organisms → Bacteria → Acidobacteria	1587	Open in IMG/M
3300026089\|Ga0207648_10655396	All Organisms → cellular organisms → Bacteria → Acidobacteria	970	Open in IMG/M
3300026118\|Ga0207675_101151688	All Organisms → cellular organisms → Bacteria → Acidobacteria	796	Open in IMG/M
3300026118\|Ga0207675_102080855	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300026142\|Ga0207698_12605368	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300026312\|Ga0209153_1096541	All Organisms → cellular organisms → Bacteria → Acidobacteria	1106	Open in IMG/M
3300026317\|Ga0209154_1228118	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300026550\|Ga0209474_10590788	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300026816\|Ga0207509_101421	All Organisms → cellular organisms → Bacteria → Acidobacteria	1064	Open in IMG/M
3300031547\|Ga0310887_10185737	All Organisms → cellular organisms → Bacteria → Acidobacteria	1119	Open in IMG/M
3300031716\|Ga0310813_10390330	All Organisms → cellular organisms → Bacteria → Acidobacteria	1195	Open in IMG/M
3300031740\|Ga0307468_101429937	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300031820\|Ga0307473_11238696	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300032180\|Ga0307471_104200392	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300034147\|Ga0364925_0327891	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.92%
Host-Associated	Host-Associated	32.08%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.21%
Plants	Host-Associated → Plants	32.08%
Aquatic	Environmental → Aquatic	4.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.15%
Sediment	Environmental → Aquatic → Sediment	4.72%
Floodplain	Environmental → Terrestrial → Floodplain	0.94%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.06%
Loam	Environmental → Terrestrial → Soil → Loam	13.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.89%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.94%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.49%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	7.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.83%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.89%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.94%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012479	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.yng.030610	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015248	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT530_16_10D	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019874	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026816	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO21-B (SPAdes)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_03508380	2170459002	Grass Soil	VGHTVLKIWTAIKLLPEDQSGAKGVNLPLVGKALRGRRALFLIGLAAIGCGLVGSLVGMSLSDLLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
F47_05027110	2170459009	Grass Soil	VAFLFAAFCVALIRPRIWRYSGWTGRAVILTLVSLGVCHTVLKIWTAIKLLPEDQSGAKWVNLPLLGKALRGRWALFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
INPgaii200_05852602	2228664022	Soil	IWRYSGWTGRAVILTLVSLGLAHTIAKIWTAIKLLPDDQSGAGVIRLPLLGKSRRSAALLLIGLAAIVCGLMGTLVGISLSDVLSMAMPRFFDQSIRLELLLYPWVMVLFLHACHSLSQRLDI
AP72_2010_repI_A01DRAFT_10513892	3300000579	Forest Soil	GLINLPLLGKSRRPATLLLIALAAILCGLVGTLVGISLSDVLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSLSQRLDI*
JGI1027J12803_1036654552	3300000955	Soil	SGAGVIRLPLLGKSRRSAALLLIGLAAIVCGLMGTLVGISLSDVLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSLSQRLDI*
Ga0063455_1008157721	3300004153	Soil	LLGRALTGRRAIFSIGLAAIVCGLLGTLVGMSLSDLLSLAMPRFFDQSIRLDLLLYPWVMVLFLNACHSVSQRLDI*
Ga0066395_102016722	3300004633	Tropical Forest Soil	SLGVVHTVAKIWTAVKMLPDDQSEAGQTGAGMINLPLIGKSRRPALLLVLLAAIVCGLVGTLVGISLSDVLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSLSQRLDI*
Ga0066672_106769541	3300005167	Soil	IWRYSGWTGRAVILTLVSLGVGHTVLKIWTAIKLLPEDQSGGKGFNLPLLGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0066675_106896261	3300005187	Soil	LVSLGVCHTVLKIWTAIKLLPEDQSGGKGFNLPLLGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0065705_101229064	3300005294	Switchgrass Rhizosphere	VGQALSGRRAVFLIGLAAIVCGLVGTFVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0070691_106220381	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	LLPEDQTGATVVHLPLVGKALSGRRAVFLIGFAAIVCGLLGTLVGMSLSDVLSLAMPRFFDQSIRLDLLLYPWVMVLFLNACHSVSQRLDI*
Ga0070669_1003562441	3300005353	Switchgrass Rhizosphere	VSLGVCHTVLKIWTAIKLLPEDQSGAKGVNLPLVGKALSGRRAVFLIGLAAIVCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVSFLNACHSVSQRLDI*
Ga0070688_1002092172	3300005365	Switchgrass Rhizosphere	KIWSAIKLLPEDESGARVVKLPFVGMAFNGRRAVFLIGLAAIVCGLVGTFVGMSLSDLLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0070688_1015939631	3300005365	Switchgrass Rhizosphere	AAFCVALIRPRIWRYSSWTGRAVILTLFSLGVCHTVSKIWAAIKLHNDDQSRAVLLNLPLFRREWSRRRALILVGLGALGCGLLGTLLSISLNDLLSMAMPRFIDPSIRLELLLYPWCMVLFLNACHSLSQRLDI*
Ga0070710_105227481	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VNLPLVGKALSGRRAVFLIGLAAIVCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0070708_1020271151	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GRAVILTLVSLGVCHTVLKIWAAIKLLPEDQTAAKRVKLPLVGKALSGRRAIFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPKFFDQSICLELLLCPWVMVLFLNACHSVSQRLDI*
Ga0066681_106202402	3300005451	Soil	ILMLVSLGVCHTVLKIWTAIKLLPEDQSGGKGFNLPLLGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWIMVLFLNACHSVSQRLDI*
Ga0068867_1007395901	3300005459	Miscanthus Rhizosphere	ALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPKFFDQSIRLDLLLYPWVMVLFLNACHSVSQRLDI*
Ga0070707_1020096131	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VILTLVSLGVCHTVLKIWTAIKLLPEDQSGAKGVKLPLVGKALSGRRAVFLIGLAAIVCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLDLLLYPWVMVLFLNACHSVSQRLDI*
Ga0070707_1021279001	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GRAVILTLVSLGVCHTVLKIWTAIKLLPEDQTGARVVHLPLVGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSISQRLDI*
Ga0070698_1012041841	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LVNLPLLGKALSGRWALVLIGLAAVGCGLVGTLVGLSLSDLLSIAMPWFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0070672_1008513621	3300005543	Miscanthus Rhizosphere	TVWKIWTAIKLLPEDQSGAKGLYLPLVGKALSGRRAVFLIGLAAIVCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLDLLLYPWVMVLFLNACHSVSQRLDI*
Ga0070695_1018013531	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	SLGVCHTVLKIWTAIKLLPEDQTGARVVKLPLVGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLDLLLYPWVMVLFLNACHSVSQRLDI*
Ga0066670_101330362	3300005560	Soil	RPRIWRYSGWTGRAVILTLVSLGVCHTVLKIWTAIKLLPEHQSGAKGVHLPLLGKALRGRRAVFLIALAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSLSQRLDI*
Ga0070702_1013143351	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	FAAFCVALIRPRIWRYSGWTGRAVILTLVSLGVCHTVLKIWTAIKLLPEDQSGAKVVKLPLVRKALSGRRAVFLIGLAAIGCGLVGTFVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0068852_1024169791	3300005616	Corn Rhizosphere	FLFAAFCVALIRPRIWRYSGWTGRAVILTLVSLGVCGTVLKIWTAIKLLPEDQSGAKVVKLPLVGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0068858_1016461531	3300005842	Switchgrass Rhizosphere	RIWRYSGWTGRAVILTLVSLGVCGTVVKIWSAIKLLPEDESGARVVKLPLVGKAFNGRRAVFLIGLAAIVCGLVGTFVGMSLSDLLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0097621_1009399281	3300006237	Miscanthus Rhizosphere	KIWTAIKLLPEDQSGARVVNLPLLGKGLSSPRALFLIGLAAIGFGLVGTLVGMSLSDLLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0066658_104826371	3300006794	Soil	SGARVVKLPLVGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0066660_102976453	3300006800	Soil	LVSLGVCHTVLKIWTAIKLLPEDQSGGKGFNLPLLGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0079220_109916302	3300006806	Agricultural Soil	GKALSGRRAVFLIGCAAIVFGLVGTLVGMSLSDLLSIAMPRFFDQSIRLDLLLYPWVMVLFLNACHSVSQRLDI*
Ga0075434_1018867431	3300006871	Populus Rhizosphere	KLPLVGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSLAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0068865_1006554231	3300006881	Miscanthus Rhizosphere	AIKLLPEDQSGAKVVKLPLVRKALSGRRAVFLIGLAAIGCGLVGTFVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0075424_1009639863	3300006904	Populus Rhizosphere	IKLLPEDQSGAKRVNLPLVGKALSGRRAVFLIGLAAIVCGLLGTLVGMSLSDVLSLAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0075436_1008846661	3300006914	Populus Rhizosphere	AIKLLPEDQSGARVVKLPLVGKALSGRRAVFLIGLAAIVCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSISQRLDI*
Ga0105240_125184151	3300009093	Corn Rhizosphere	QVNWRPRDQTGARVVNLPLVGKALSGRRAVFLIGLAAIGCGLLGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0105243_117291041	3300009148	Miscanthus Rhizosphere	IRPRIWRYSSWTGRAVILTLVSLGVCGTVVKIWTAIKLLPEDQTGARVVNLPLLGKALSGRRAVFFIGLAAIVCGLAGTLVGMSLSDLLSLAMPRFFDQSIRLDLLLYPWVMVLFLNACHSVSQRLDI*
Ga0105248_111733432	3300009177	Switchgrass Rhizosphere	AFCVALIRPRIWRYSGWTARAVILALVTLGVCHTVAKIWTAIKLLPEDESGTRVVRLPLIGKALSGRRAVFLIGLAAVGCGLLGTLVGMSLSDLLSLAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0126380_118559401	3300010043	Tropical Forest Soil	FAAFCVALIRPRIWRYSGWTGRAVILALVSLGVCHTVLKIWSAIKLLPEDQTGARVVHLPLVGKALSGPRAVFLIGLAAIGCGLVGTLVGMSLSDLLSFAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0126384_120792961	3300010046	Tropical Forest Soil	AVILTLVSLGVGHTVAKIWIAIKLLPDDRAGSGVINLPLVGKALSRRPAVLLIGLAAIVCGLMGTLVGISLSDVLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSLSQRLDI*
Ga0126384_121366991	3300010046	Tropical Forest Soil	GVCGTVWKIWTAIKLLPEDQTGARINLPLLGKALSGRRALFLIGLAAIGCGLVGTLVGMSLSDLLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0134084_102727441	3300010322	Grasslands Soil	KGVNLPLLGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0134062_102559862	3300010337	Grasslands Soil	LPEDQTGARVVHLPLLGRALSGRRAIFFIGLAAIVCGLLGTLVGMSLSDLLSLAMPRFFDQSIRLDLLLYPWVMVLFLNACHSVSQRLDI*
Ga0126376_104925801	3300010359	Tropical Forest Soil	RVVNLPLLGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSMAMPRFFDQSIRLDLLLYPWVMVLFLNACHSVSQRLDI*
Ga0126379_110630381	3300010366	Tropical Forest Soil	EDQSGTRVVNLPLVGRALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0134128_123868471	3300010373	Terrestrial Soil	PRIWPYSGRNGRVVILTLVSLGVCHTVWKIWTAIKLLPEDQSGAKGINLPLVGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLDLLLCPWVMVLFLNACHSVSQRLDI*
Ga0134124_126809291	3300010397	Terrestrial Soil	VALIRPRIWRSSSWSGRAVILTLVTLGVCGTVAKIWTAIKLLPEDQTGARMVHLPLVGKALSGRRAVFLIGLAAIVCGLLGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0126383_110896281	3300010398	Tropical Forest Soil	GVAHTVAKIWTAVKMLPDDQSGAGLINLPLLGKSRRPALLLIGLAAIACGLMGTLVGISLSDLLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSLSQRLDI*
Ga0134127_101135043	3300010399	Terrestrial Soil	ALIRPRIWRYSGTTGRAVILALVSLGVCHTVLKIWTAITLLPEDQSGANRVNLPLLGKALRGRWALFSIGLAAIGCGLVGTLVGMSLSDLLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0134127_125024491	3300010399	Terrestrial Soil	IKLLPEDQSGAKVVKLPLVGKALSGRRAVFLIGLGAIVCGLVGTLVGMSLSDLLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0134122_121223491	3300010400	Terrestrial Soil	LLPEDESGARVVKLPLVGQALSGRRALFSIGLAAIVCGLVGTFVGMSLSDLLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSASQRLDI*
Ga0134122_125224741	3300010400	Terrestrial Soil	LVNLPLLGKALSGRWALVLIGLAAVGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLDLLLYPWVMVLFLNACHSVSQRLDI*
Ga0134123_101491891	3300010403	Terrestrial Soil	STCDRKLLYRWPHIWRYSGTTGRAVILTLVSLGVCHTVLKIWTAIKLLPEDRSGAKGFNLPLLGKGLSGPRALFLIGLAAIGFGLVGTLVGMSLSDILSIAIPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0134123_103880583	3300010403	Terrestrial Soil	LGVGHTVLKIWTAIKLLPEDQSGAKGVNLPLLGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSELLSMAMPGFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0137362_100738974	3300012205	Vadose Zone Soil	VLKIWTAIKLLPEDQTGARVVKLPLFGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0137435_10307191	3300012232	Soil	VLKIWTAIKLLPEDESGAKRVNLPLLGKALSGRWALFLVGLAAIGCGLVGTFVGMSLSDLLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0157348_10256521	3300012479	Unplanted Soil	VAFLFAAFCVALIRPRIWRYSGWTGRTVILTLVSLGVCGTVLKIWTAIKLLPEDQSGAKVVNLPLLGKALSGPRALFLIGLAAIGCGLVGTLVGMSLSDLLSVAMPRFFDQSVRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0137358_106213261	3300012582	Vadose Zone Soil	TVLKIWTAIKLLPEDQSGAKVVKLPLLGKALSGRRALFLIGLAAIGCGVLGTLVGMSLSDLLSMAMPKFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0157216_104151491	3300012668	Glacier Forefield Soil	LVSLGVCHTVLKIWTAIKLLPEDQSGARVVNLPVVGKALSGRRALFLIGLAAIGCGVVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0137404_105936052	3300012929	Vadose Zone Soil	WRYSGWTGRAVILTLVSLGVCHTVWKIWTAIKLLPEDQSSAKGVNLPLVGKALSGRRALFVIGLAAIVCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0137404_110005471	3300012929	Vadose Zone Soil	TLVSLGVCHTVWKIWTAIKLLPEDQSGAKAVNLPLLGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0137407_120439731	3300012930	Vadose Zone Soil	SLGVCHTVLKIWTAIKLLPEDPSDAKVVNLPVLRKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0126375_100915691	3300012948	Tropical Forest Soil	SRAGVINLPLLGKALSRRPALLLIGLAAIVCGLLGTLVGISLSDVLSLAMPRFFDQSIRLELLLYPWVMVLFLNACHSLSQRLDI*
Ga0126375_103693501	3300012948	Tropical Forest Soil	PLLGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSLRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0164300_102229292	3300012951	Soil	KLLPEDQSGVKTVNLPLVGKALSGRRALFVIGLAAIVCGLVGTLVGMSLSDLLSLAMPRFFDQSIRMDLLLYPWVMVLFLNACHSVSQRLDI*
Ga0164305_114533461	3300012989	Soil	EDQSGAKGINLPLVGKALSGRRAIFLIGLAAIVCGLVGTFVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0157371_109777481	3300013102	Corn Rhizosphere	TAIKLLPEDQSGAKGINLPLVGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIGLDLLLYPWVMVLFLNACHSVSQRLDI*
Ga0157378_102131503	3300013297	Miscanthus Rhizosphere	GVCGTVVKIWTAIKLLPEDQSGARRVKLPLVGKALSGRRAVFLIGFAAIVCGLLGTLVGMSLSDVLSLAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0163162_106413043	3300013306	Switchgrass Rhizosphere	ILTLVSLGVCHTVPKIWTAIKLLPADQSGAKVVKLPLVRKALSGRRAVFLIGLAAIGCGLVGTFVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0163162_113626182	3300013306	Switchgrass Rhizosphere	VLKIWTAIKLLPEDQSGAKGINLPLVGKTLSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSLAMPRFFDQSIRMDLLLYPWVMVLFL
Ga0163162_134532181	3300013306	Switchgrass Rhizosphere	VSLGVCGTVVKIWSAIKLLPEDESGARVVKLPLVGKAFNGRRAVFLIGLAAIVCGLVGTFVGMSLSDLLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0157375_123612692	3300013308	Miscanthus Rhizosphere	KIWTAIKLLPENQSGARLVNLPLLGKALSGRWALVLIGLAAVGCGLVGTLVGLSLSDLLSIAMPWFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0157375_133216311	3300013308	Miscanthus Rhizosphere	AFLFAAFCVALIRPRIWRYSGWTGRAVILTLVSLGVCGTVLKIWAAVKLLPEDQTGARVVKLPLVGKALSGRRAVFLIGFAAIGCGLLGTLVGMSLSDLLSLAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0180079_10205791	3300015248	Soil	VLKIWTAIKRLPEDQSGARVVNLPVVGKALSGRRALFLIGLAAIVCGLVGTLVGMSLSDLLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0134072_104308021	3300015357	Grasslands Soil	SGWTGRAVILMLVSLGVCHTVLKIWTAIKLLPEDQSGGKGFNLPLLGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0132256_1018559551	3300015372	Arabidopsis Rhizosphere	VVKLPLVGKALSGRRAVFLIGLAAIACGLGGTLVGMSLSDLLSIAMPRFFDQSIRLDLLLYPWVMVSFLNACHSVSQRLDI*
Ga0132256_1030034361	3300015372	Arabidopsis Rhizosphere	VWKIWTAITLLPEDQTGATVVHLPLVGKALSGRRAVFLIGLAAIACGLLGTLVGMSLSDLLSIAMPRFFDQSIRLDLLLYPWVMVLFLNACHSVSQRLDI*
Ga0132257_1010587201	3300015373	Arabidopsis Rhizosphere	VCGTVLKIWSAIKMLPEDQTGAGVINLPLLGKALSRRPALLLIGLAAIVCGLMGTLVGLSLSDVLSMVMPRFFDQSIRLDLLLYPWVMVLFLNACHSLSQRLDI*
Ga0132257_1023272882	3300015373	Arabidopsis Rhizosphere	VLKIWTAIKLLPEDQSGAKVVKLPLVGKALSGRRAVFLIGLAAIGCGLVGTFVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI*
Ga0163161_119024271	3300017792	Switchgrass Rhizosphere	KLLPEDQTGARVVKLPLVGNALSGRRAVFLIGLAAIGCGLLGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0184604_101783721	3300018000	Groundwater Sediment	TGRAVILTLVSLGVGHTVLKIWTAIKLLPENQSGARLVNLPLLGKALSGRWALVLIGLAAVGCGLVGTLVGMSLSDLLSIAMPGFFDQSLRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0184619_104949492	3300018061	Groundwater Sediment	ALIRPRIWRHSGWTGRAVILTLVSLGVGHTVLKIWTAIKLLPEDQSGARVVNLPVVGKALSGRRALFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0184628_100268083	3300018083	Groundwater Sediment	MRTSENRTNRKPDPAPGSSLGVCHTVLKIWTAIKLLPEDESGAKRVNLPLLGKALSGRRAVFLIGLAAIVCGLLGTFVGMSLSDLLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0190271_119347521	3300018481	Soil	VILTLVGLGVCHTVLKIWTAIKLLPEDQTGARVVKLPLVGKALRGRRAVFLIGLAAIGCGLVGTAVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSLSQRLDI
Ga0193744_10268611	3300019874	Soil	TVWKIWTAIKLLPEDQSGARVVNLPVVGKALSGRRALFLIGLAAIVFGLLGTLVGMSLSDLLSMAMPRLFDQSIRLELLLYPWVMVLFLNACHSLSQRLDI
Ga0207692_104437972	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LIRPRIWRYSGWTGRAVILTLVSLGVCHTVLKIWTAIKLLPEDQSGAKRVNLPLVGKALSGRRAVFLIGLAAIVCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0207645_104493751	3300025907	Miscanthus Rhizosphere	GRAVILTLVSLGVCHTVLKIWTAIKLLPEDQSGAKVVKLPLVGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0207681_103521031	3300025923	Switchgrass Rhizosphere	VCHTVLKIWTAIKLLPDDQTGAKGISLPLLGKALRGPRALFLIGLAAIVCGLMGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVSFLNACHSVSQRLDI
Ga0207644_106816741	3300025931	Switchgrass Rhizosphere	VSLGVAHTVLKIWSAIKLLPEDQSNARVINLPLVGKALSGRRAIFLIGLAAIGCGLVGTLVGVSLSDLLSIAMPRFFDQSIRLDLLLYPWVMVLFLNACHSVSQRLDI
Ga0207670_111115501	3300025936	Switchgrass Rhizosphere	EDQSGAKGFNLPLVGKALSGRRAVFLIGVAAIVCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0207704_117585221	3300025938	Miscanthus Rhizosphere	LTLVSLGVSHTVLKIWTAIKLLPEDQSGAKVVKLPLVRKALSGRRAVFLIGLAAIGCGLVGTFVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0207712_101989461	3300025961	Switchgrass Rhizosphere	RPRIWRYSGWTGRAVILTLVSLGVCGTVLKIWSAIKLLPEDESGARVVKLPFVGKAFNGRRAVFLIGLAAIVCGLVGTFVGMSLSDLLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0207648_106553961	3300026089	Miscanthus Rhizosphere	LLPEDQSGAKVVKLPLVGKALSGRRAVFLIGLAAIGCGLVGTFVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0207675_1011516881	3300026118	Switchgrass Rhizosphere	LIRPRIWRYSGWTGRAVILTLVSLGVCGTVLKIWAAIKLLPEDQTGARVVKLPLVGNALSGRRAVFLIGLAAIGCGLLGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0207675_1020808551	3300026118	Switchgrass Rhizosphere	NLPLVGKALSGRRAVFLIGLAAIVCGLVGTFVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0207698_126053682	3300026142	Corn Rhizosphere	LKIWAAIKLLPEDQTGARVVKLPLVGKALSGRRAVFLIGLAAIVCGLLGTFVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0209153_10965412	3300026312	Soil	PRIWRYSGWTGRAVILTLVSLGVCHTVLKIWTAIKLLPEDQSGAKGAKLPLLGKALSGRRAVFLIGLAAIVCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0209154_12281181	3300026317	Soil	CVALIRPRIWRYSGWTGRAVILTLVSLGVGHTVLKIWTAIKLLPEDQSGGKGFNLPLLGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0209474_105907881	3300026550	Soil	VILTLVSLGVCHTVLKIWTAIKLLPEDQSGAKGVNLPLLGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWIMVLFLNACHSVSQRLDI
Ga0207509_1014211	3300026816	Soil	IRPRIWRYSGTTGRAVILTLVSLGVCHTVLKIWTAIKLLPEDESGAKGVNLPLLGKALRGRRALFLIGLAAIVFGLVGTFVGMSLSDLLSMAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0310887_101857371	3300031547	Soil	IRPRIWRYSGWNGRAVILTLVSLGVGHTVLKIWTAIKLLPEDQTGARVVKLPLVGQALSGRRAVFLIGLAAIVCGLLGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0310813_103903301	3300031716	Soil	LPEDQTGARVVHLPLVGKALSGHRALFSIGLAAIVCGLLGTLIGMSLSDVLSLAMPRFFDQSIRLELLLYPWVMVLFLNACHSLSQRLDI
Ga0307468_1014299371	3300031740	Hardwood Forest Soil	DQSGAKGVNLPFVGKALSGRRAVFLIGLAAIVCGLVGTLIGMSLTDLLSIAMPRFFDQSIRLDLLLYPWVMVLFLNACHSVSQRLDI
Ga0307473_112386961	3300031820	Hardwood Forest Soil	SGWTGRAVILTLVSLGVCHTVLKIWTAIKLLPEDQSGAKGVNLPLLGKALSGRRAVFLIGLGAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0307471_1042003921	3300032180	Hardwood Forest Soil	HTVWKIWTAIKLLPEDQSGAKGINLPLVGKALSGRRAVFLIGLAAIGCGLVGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI
Ga0364925_0327891_35_457	3300034147	Sediment	VAFLFAAFCVALIRPRIWRYSGTTGRAVILTLVSLGVCHTVLKIWTAIKLLPEDQSGAKGVNLPLLGKALSGRRAVFLIGLAALVCGLLGTLVGMSLSDLLSIAMPRFFDQSIRLELLLYPWVMVLFLNACHSVSQRLDI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094023

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences