Metagenome / Metatranscriptome Family F093919

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093919
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	102 residues
Representative Sequence	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLVPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWSEQEAQMDRLMDEAARVHHFRLVLERYE
Number of Associated Samples	86
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.17 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	97.17 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere (13.207 % of family members)
Environment Ontology (ENVO)	Unclassified (55.660 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (63.208 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.09% β-sheet: 12.21% Coil/Unstructured: 39.69%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF01594	AI-2E_transport	28.30

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	28.30

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	94.34 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	94.34 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	86.79 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	4.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	86.79 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	4.72 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	86.79 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4.72 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	86.79 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	3.77 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.94 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	86.79 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	3.77 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.94 %
unclassified Microbacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	86.79 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	3.77 %
Microbacterium sp. URHA0036	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp. URHA0036	0.94 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.94 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_105118009	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	510	Open in IMG/M
3300001991\|JGI24743J22301_10097601	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	631	Open in IMG/M
3300003990\|Ga0055455_10035021	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300004156\|Ga0062589_101334946	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	695	Open in IMG/M
3300004463\|Ga0063356_104341094	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	610	Open in IMG/M
3300005328\|Ga0070676_10090282	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1876	Open in IMG/M
3300005328\|Ga0070676_11598228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp. URHA0036	504	Open in IMG/M
3300005331\|Ga0070670_101596821	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	599	Open in IMG/M
3300005333\|Ga0070677_10106370	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300005339\|Ga0070660_100859889	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	764	Open in IMG/M
3300005345\|Ga0070692_10116901	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1482	Open in IMG/M
3300005345\|Ga0070692_10160373	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1288	Open in IMG/M
3300005347\|Ga0070668_102197160	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	510	Open in IMG/M
3300005353\|Ga0070669_100978928	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	725	Open in IMG/M
3300005355\|Ga0070671_100209454	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1653	Open in IMG/M
3300005355\|Ga0070671_101610647	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	575	Open in IMG/M
3300005366\|Ga0070659_100840955	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	800	Open in IMG/M
3300005366\|Ga0070659_101028640	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	724	Open in IMG/M
3300005366\|Ga0070659_102055391	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	513	Open in IMG/M
3300005367\|Ga0070667_100379078	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300005456\|Ga0070678_100710408	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	906	Open in IMG/M
3300005457\|Ga0070662_100013898	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5363	Open in IMG/M
3300005457\|Ga0070662_100469239	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1047	Open in IMG/M
3300005457\|Ga0070662_100840061	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	782	Open in IMG/M
3300005459\|Ga0068867_101039284	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	745	Open in IMG/M
3300005459\|Ga0068867_102345652	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300005471\|Ga0070698_100861400	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	851	Open in IMG/M
3300005530\|Ga0070679_101134621	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	727	Open in IMG/M
3300005546\|Ga0070696_101864047	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	520	Open in IMG/M
3300005564\|Ga0070664_100866494	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	846	Open in IMG/M
3300006358\|Ga0068871_102016241	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	549	Open in IMG/M
3300006606\|Ga0074062_11515503	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	533	Open in IMG/M
3300006755\|Ga0079222_12159020	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	552	Open in IMG/M
3300006844\|Ga0075428_100322029	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1661	Open in IMG/M
3300006876\|Ga0079217_10092994	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1336	Open in IMG/M
3300006953\|Ga0074063_12558910	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	615	Open in IMG/M
3300009098\|Ga0105245_10391144	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1387	Open in IMG/M
3300009100\|Ga0075418_11552157	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	719	Open in IMG/M
3300009177\|Ga0105248_10637850	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1202	Open in IMG/M
3300009553\|Ga0105249_11150162	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	847	Open in IMG/M
3300009553\|Ga0105249_13091943	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	535	Open in IMG/M
3300010037\|Ga0126304_10967103	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	580	Open in IMG/M
3300010045\|Ga0126311_11897866	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	506	Open in IMG/M
3300010397\|Ga0134124_11895838	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	631	Open in IMG/M
3300012212\|Ga0150985_105964544	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	515	Open in IMG/M
3300012469\|Ga0150984_107633259	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	519	Open in IMG/M
3300012955\|Ga0164298_10453484	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	844	Open in IMG/M
3300012961\|Ga0164302_10511447	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	850	Open in IMG/M
3300012985\|Ga0164308_11721197	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	582	Open in IMG/M
3300012986\|Ga0164304_10411528	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	964	Open in IMG/M
3300012987\|Ga0164307_10522950	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	901	Open in IMG/M
3300012988\|Ga0164306_10391991	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1041	Open in IMG/M
3300012989\|Ga0164305_10723473	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	816	Open in IMG/M
3300012989\|Ga0164305_11076391	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	689	Open in IMG/M
3300012989\|Ga0164305_11921643	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	538	Open in IMG/M
3300013100\|Ga0157373_10759528	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	713	Open in IMG/M
3300013105\|Ga0157369_10407065	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1411	Open in IMG/M
3300013296\|Ga0157374_12816239	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	514	Open in IMG/M
3300013297\|Ga0157378_12795085	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	541	Open in IMG/M
3300015262\|Ga0182007_10407318	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	519	Open in IMG/M
3300015371\|Ga0132258_11314604	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1827	Open in IMG/M
3300015374\|Ga0132255_106023219	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	513	Open in IMG/M
3300018476\|Ga0190274_10218421	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1696	Open in IMG/M
3300018920\|Ga0190273_12126724	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	524	Open in IMG/M
3300019362\|Ga0173479_10239330	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	791	Open in IMG/M
3300021445\|Ga0182009_10113637	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300022756\|Ga0222622_10228360	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1250	Open in IMG/M
3300025899\|Ga0207642_10398918	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	823	Open in IMG/M
3300025903\|Ga0207680_10147144	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1567	Open in IMG/M
3300025904\|Ga0207647_10787938	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	512	Open in IMG/M
3300025909\|Ga0207705_10911991	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	680	Open in IMG/M
3300025919\|Ga0207657_10657060	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	816	Open in IMG/M
3300025921\|Ga0207652_10907242	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	778	Open in IMG/M
3300025932\|Ga0207690_11432740	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	578	Open in IMG/M
3300025933\|Ga0207706_10193634	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1784	Open in IMG/M
3300025933\|Ga0207706_10471320	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1085	Open in IMG/M
3300025933\|Ga0207706_10726605	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	847	Open in IMG/M
3300025935\|Ga0207709_11610294	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	539	Open in IMG/M
3300025937\|Ga0207669_10008660	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4790	Open in IMG/M
3300025944\|Ga0207661_11009201	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	766	Open in IMG/M
3300025960\|Ga0207651_11988412	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	522	Open in IMG/M
3300025986\|Ga0207658_10438581	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1154	Open in IMG/M
3300026035\|Ga0207703_10746842	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	932	Open in IMG/M
3300026035\|Ga0207703_12263169	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	519	Open in IMG/M
3300026075\|Ga0207708_10948210	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	746	Open in IMG/M
3300026121\|Ga0207683_10288997	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300026121\|Ga0207683_10572018	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1045	Open in IMG/M
3300028381\|Ga0268264_11947899	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	597	Open in IMG/M
3300028880\|Ga0307300_10366705	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	500	Open in IMG/M
3300031548\|Ga0307408_100747728	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	883	Open in IMG/M
3300031548\|Ga0307408_101322760	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	676	Open in IMG/M
3300031548\|Ga0307408_101896851	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	571	Open in IMG/M
3300031854\|Ga0310904_11223301	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	542	Open in IMG/M
3300031903\|Ga0307407_10375578	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1013	Open in IMG/M
3300031938\|Ga0308175_101125055	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	871	Open in IMG/M
3300031938\|Ga0308175_102708814	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	554	Open in IMG/M
3300031939\|Ga0308174_11681333	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	545	Open in IMG/M
3300031995\|Ga0307409_100435153	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1262	Open in IMG/M
3300031995\|Ga0307409_101602203	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	679	Open in IMG/M
3300031996\|Ga0308176_10072106	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2929	Open in IMG/M
3300031996\|Ga0308176_11771183	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	659	Open in IMG/M
3300032002\|Ga0307416_101592933	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	758	Open in IMG/M
3300032005\|Ga0307411_11165214	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	697	Open in IMG/M
3300032074\|Ga0308173_12137349	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	528	Open in IMG/M
3300032126\|Ga0307415_101983310	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	566	Open in IMG/M
3300033475\|Ga0310811_10286004	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1914	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	61.32%
Environmental	Environmental	38.68%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	61.32%
Terrestrial	Environmental → Terrestrial	36.79%
Aquatic	Environmental → Aquatic	1.89%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	46.23%
Soil	Environmental → Terrestrial → Soil	36.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.15%
Marine	Environmental → Aquatic → Marine	0.94%
Sediment	Environmental → Aquatic → Sediment	0.94%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	26.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.49%
Loam	Environmental → Terrestrial → Soil → Loam	7.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.83%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	26.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.55%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.21%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	13.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	8.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.94%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1051180091	3300000955	Soil	MTAHYTLTSHGTVLGHTGAIFPAYELPPGAYLWHLIPTGAFDLVEPIIAELTAPPALSLVEDVIPTRDDYLHPGWSEQRAQMDRLMDEAARVHHFRLVLERYEA
JGI24743J22301_100976011	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	MSMQYTLMSHGEVLGHTGVAFPPDELPAGTNVWHLVPTAAFDFVEPIIAELTAPPALSLVEDVIPTRDAYLHPARNEHDAQMERLVHEAARIHHFRLVLERYEGLDLELRDACGRRVAATTLLVSKQMV
Ga0055455_100350211	3300003990	Natural And Restored Wetlands	MMSVHYTLMSHGTVLGHTGAAFPADELPAGASVWHLVPTAAFDLVEPIVAELTAPSALSLVEEVIPTQDDYL
Ga0062589_1013349461	3300004156	Soil	MTVHYALMSHGKVLGHTGAVLPADELPPGASVWHFVPTGAFDLVEPIIAELTAPPALALVDDVIPTPDDYLHPSRREHEAQMERL
Ga0063356_1043410941	3300004463	Arabidopsis Thaliana Rhizosphere	MTVRYTLMSHGKVLGHMGAAFPRDDVPAGASVWHLLPTAAFDLVEPIIAELTAPPALALVEDVIPTQEAYLHPAWREHEAQMERLVSEAARIHHFRMVLERYEALDLELRDASGRR
Ga0070676_100902821	3300005328	Miscanthus Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPG
Ga0070676_115982281	3300005328	Miscanthus Rhizosphere	MTPHYTIVSHGTVLGHTGAAFPTDGLPVGAALWHLIPAQGFDLVEPIIAELTALPALSLVEEVIPTPDAYLHPDRSEQQAQMDRLIKEAARVHRFRLVLERYEALALELRDGAGHR
Ga0070670_1015968211	3300005331	Switchgrass Rhizosphere	MSMQYTLMSHGEVLGHTGVAFPPDELPAGTSVWHLVPTAAFDFVEPVIAELTAPPALSLVEDVIPTRDAYLHPARNEHDAQMERLVHEAARIHHFR
Ga0070677_101063701	3300005333	Miscanthus Rhizosphere	MTAHYTLVSHGTVLGHTGAAFPTDGLPVGAALWHLIPAQGFDLVEPIIAELTALPALSLVEEVIPTPDAYLHPDRSEQQAQMDRLIKEAARVHRFRLVLERYEALALELRDGAGHRVAVAPMIVKQMVPAES
Ga0070660_1008598891	3300005339	Corn Rhizosphere	MSMQYTLMSHGEVLGHTGVAFPPDELPAGTNVWHLVPTAAFDFVEPIIAELTAPPALSLVEDVIPTRDAYLHPAR
Ga0070692_101169011	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDIVEPIIAELTAPPALSLVEDVIPTRDDYLHPG
Ga0070692_101603732	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MSMQYTLMSHGEVLGHTGVAFPPDELPAGTNVWHLVPTAAFDFVEPIIAELTAPPALSLVEEVIPTQDAYLHPARGEHEAQMERAVREAARIHHFRLVLERYEDLELELRDASGRRVATTTLLVSKQL
Ga0070668_1021971601	3300005347	Switchgrass Rhizosphere	MTAHYTLTSHGTALGHTGAAFPADELPPGAYLWHLIPTRAFDVVEPIIAELTAPPALTLVEDVIPTRDDYLHPGFSEQKAQMDRLMDEAARVHHFRLVLERYEALELELHDGAG
Ga0070669_1009789282	3300005353	Switchgrass Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLVPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWSEQQAQMDRLMDEAARVHHFRLVLERYEALGLELHD
Ga0070671_1002094542	3300005355	Switchgrass Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDVVEPIIAELTAPPALTLVEDVIPTRDDYLHPGFSEQKAQMDRLVDEAARVHHFRLVLERYEALELELNDGAGRRVAVAPMIVKQMVPTESV
Ga0070671_1016106471	3300005355	Switchgrass Rhizosphere	MSMQYTLMSHGEVLGHTGAAFPPDELPAGTSVWHLVPTAAFDFVEPIIAELTAPPALSLVEDVIPTRDAYLHPARNEHDAQMERLVHEAARIHHFRLVLERYEGLDLELRDARGRRVAATTLLVSK
Ga0070659_1008409551	3300005366	Corn Rhizosphere	MTGHYTLTSHGTVLGHTGAAFPADELPLGAHLWHLIPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGW
Ga0070659_1010286402	3300005366	Corn Rhizosphere	MSMQYTLMSHGEVLGHTGVAFPPDELPAGTNVWHLVPTAAFDFVEPIIAELTAPPALSLVEDVIPTRDAYLHPARNEHDAQMERLVHEAVR
Ga0070659_1020553911	3300005366	Corn Rhizosphere	MTMHYTLMSHGKVLGHTAAAFPPEELPAGASVWYLVPTAAFDFVEPIIAELTAPPAVALVEEVIPTQDAYLHPAWGE
Ga0070667_1003790781	3300005367	Switchgrass Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLVPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWSEQ
Ga0070678_1007104081	3300005456	Miscanthus Rhizosphere	MTMQYALMSHGKVLGYTGVAFPSAELPAGASVWHLVPTAAFDLVEPIIAELTAPPALELVDEVIPTQDEYLHSARHEHEARMERLVYDAARIHHFRMVLERYEGLELAL
Ga0070662_1000138986	3300005457	Corn Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWSEQQAQMDRLMDEAARVHHFRLVLERYE
Ga0070662_1004692391	3300005457	Corn Rhizosphere	MTAHYTLVSHGTVLGHTGAAFPTDGLPVGALLWHLVPTPAFDLVEPIIAELTAPPALTLVEEVIPTPDAYLHPGWGEQQAQMDRLMDEA
Ga0070662_1008400612	3300005457	Corn Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDIVEPIIAELTAPPALSLVEDVIPTRDDYLHPGWGEQQAQMDRLMDEA
Ga0068867_1010392842	3300005459	Miscanthus Rhizosphere	MTMHYTLMSHGKVLGHTAAAFPPEELPAGASVWYLVPTAAFDFVEPIIAELTAPPAVALVEEVIPTQDAYLHPAWGEHDAQMERLTQEAARIHHFRV
Ga0068867_1023456522	3300005459	Miscanthus Rhizosphere	MTPHYTIVSHGTVLGHTGAAFPTDGLPVGAALWHLIPAQGFDLVEPIIAELTALPALSLVEEVIPTPDARLHP
Ga0070698_1008614002	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGW
Ga0070679_1011346211	3300005530	Corn Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLVPTRAFDLVEPIIAELTAPPALSLVEDVIPTRDDYLHPGWGEQQAQMDRLMDEAARVHHFRLVLERYERLGLELHDASGRRVAVSPMIVKQLVPTETVRA
Ga0070696_1018640471	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPAGAYLWHLVPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWSEQQAQMDRLMDEAARVHHFRL
Ga0070664_1008664943	3300005564	Corn Rhizosphere	MTMHYTLMSHGKVLGHTAAAFPPEELPAGASVWHLVPSAAFDFVEPIIAELTAPPAIALVEEVIPTPDAYLHPAWREHDAQLERLAHEAARIHHFRVVLERYEALDLELRDASGRRLATTSIIVTKQTVTADA
Ga0068871_1020162411	3300006358	Miscanthus Rhizosphere	MSMQYTLMSHGEVLGHTGVAFPPDELPAGTNVWHLVPTAAFDFVEPIIAELTAPPAIALVEEVIPTQDDYLHPAWREHDAQLERLAHEAARIHHFRVVLERYEALDLELRDASGR
Ga0074062_115155031	3300006606	Soil	MTAHYTLTSHGTVLGHTGASFPADELPAGACLWHLIPTRAFDLVEPIIAELTAPPALTLVEEVIPTRDDYLHPGFSEQQAQMDRLMDEAARVHHFRLVLERYEALGLELHDFTGRRVAVSPMIVKQMVP
Ga0079222_121590201	3300006755	Agricultural Soil	MTTQFALMSHGQVLGYTGAAFSSDELPSDASLWHLVPTEAFAYVEPIIAELTAPPALSLVDDVIPTQNDYLHAARAEHEAQMERLAHEAARIHHFRLVLERYEELDLELRDASGRRVETTSLLVSKQL
Ga0075428_1003220291	3300006844	Populus Rhizosphere	MTMHYTLMSQGKVLGRTGAAFPRNELPAGASMWHLVPTAAFDAVEPIIAELTAPPALALVEEVIPTQEAYLHTAWSEHEVQMERLIGEAARIHHFRMVLERYEALDLELRDAS
Ga0079217_100929942	3300006876	Agricultural Soil	MASHYALVSHGRVLGYTAAAFPAEEMPAGTNAWHLVPTPAFDAVEPIVAELSAPPTLSLVEEVLPTRDEYLHPSWNEH
Ga0074063_125589101	3300006953	Soil	MTAHYTLMSHGTVLGTTGAEFPGDELPTGARLWHLIPTQAFDLVEPIIAELTAPPALSLVEDVIPTPDEYLHPGWSEQQAQLDRLMEEAARVHHFRLVLERYEGLGLELRDGAGHRVAMSPMIVKQMVPAESVRAFG
Ga0105245_103911441	3300009098	Miscanthus Rhizosphere	MTAHYTLTSHGTALGHTGAAFPADELPPGAYLWHLIPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWNEQQAQMDRLMDEAARVHHFRLVLERYEALRLELHDASGRR
Ga0075418_115521571	3300009100	Populus Rhizosphere	MTMHYTLMSQGKVLGRTGAAFPRDELPAGASMWHLVPTAAFDAVEPIIAELTAPPALALVEEVIPTQEAYLHPAWSEHEAQME
Ga0105248_106378501	3300009177	Switchgrass Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLVPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWSEQEAQMDRLMDEAARVHHFRLVLERYE
Ga0105249_111501621	3300009553	Switchgrass Rhizosphere	MTAHYTLTSHGTALGHTGAAFPADELPPGAYLWHLIPTRAFDVVEPIIAELTAPPALTLVEDVIPTRDDYLHPGFSEQKAQMDRLMDEAARVHHFRLVLERYE
Ga0105249_130919431	3300009553	Switchgrass Rhizosphere	MSMQYTLMSHGEVLGHTGVAFPPDELPAGTSVWHLVPTAAFDFVEPIIAELTAPPALSLVEDVIPTRDAYLHPARNEHDAQMERLVHEAARIHHFRLVLERYEG
Ga0126304_109671031	3300010037	Serpentine Soil	MDRIVTRNRAHLERDAMTMHYTLMSHGKVLGHTAAAFPPEELPAGASVWHLVPSAAFDFVEPIIAELTALPAVALVEEVISAQDAYL
Ga0126311_118978661	3300010045	Serpentine Soil	VTDAPPDRLRRITAERFPMTVHFTLMSHGKAIAYTGAAFPTDELPAGTSAWHLIPAEAFDLVEPIVAELSAPPALALVEDVIPTRDAYLHPAWSEH
Ga0134124_118958381	3300010397	Terrestrial Soil	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDLVEPIIAELTAPPALTLVEDVIPTRDDYLHPGWSEQQAQMDRLMDEAARV
Ga0150985_1059645441	3300012212	Avena Fatua Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGACLWHLIPSRAFDLVEPIIAELTAPPALSLVEDVIPTRDDYLHPGWGEQQTQMDRLMDEAARVHHFRLVLERYE
Ga0150984_1076332591	3300012469	Avena Fatua Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPAAELPPGACLWHLIPSRAFDLVEPIIAELTAPPALSLVEDVIPTRDDYLHPGWGEQQAQMDRLMDEAAR
Ga0164298_104534842	3300012955	Soil	MTAQYTLTSHGTVLGHTGAAFPADELPAGAYLWHLVPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWSEQQAQMDRLMD
Ga0164302_105114471	3300012961	Soil	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLVPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWSEQQAQMDRLMDEAARVHHFRLVLERYEALGLELHDFTGRRVAVSPMIVKQMVPTE
Ga0164308_117211971	3300012985	Soil	MTAHYTLTSHGTVLGHTGAAFPADELPAGAYLWHLVPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWSEQQAQMDRLMDEAARVHHFRLVLERYEALGLELHDFTGRRVAVSPMIVKQMVPTESVR
Ga0164304_104115282	3300012986	Soil	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPAWCERQAQMERLVDEAARVHHFRLVLERY
Ga0164307_105229501	3300012987	Soil	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPAWCERQAQMERLVDEAARVHHFRLVLERYEGLGLTLHDASSRRVAVSPMIVKQIGPTETVRAFA
Ga0164306_103919911	3300012988	Soil	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPAWCERQAQMERLVDEAARVHHFRLV
Ga0164305_107234731	3300012989	Soil	MTAHYTLTSHGTVLGHTGAALPAGELPPGAHLWHLIPTRAFDVVEPIIAELTAPPALTLVEDVIPTRDDYLHPG
Ga0164305_110763911	3300012989	Soil	MTAQYTLTSHGTVLGHTGAAFPADELPAGAYLWHLVPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWSEQQAQMDRLMDEAARVHHFRLVLERYEALGL
Ga0164305_119216431	3300012989	Soil	MTAHYTLTGHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPAWCERQ
Ga0157373_107595281	3300013100	Corn Rhizosphere	MSMQYTLMSHGEVLGHTGVAFPPDELPAGTSVWHLVPTAAFDFVEPIIAELTAPPALSLVEDVIPTRDAYLHPARNEHDAQMERLVHEAARIHHFRLVLERYEGLDLEL
Ga0157369_104070651	3300013105	Corn Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDIVEPIIAELTAPPALSLVEDVIPTRDDYLHPGWGEQQAQMDRLMDEAARVHH
Ga0157374_128162391	3300013296	Miscanthus Rhizosphere	MTAHYTLTSHGTALGHTGAAFPADELPPGAYLWHLIPTRAFDVVEPIIAELTAPPALTLVEDVIPTRDDYLHPGFSEQKAQMDRLMDEAARVHHF
Ga0157378_127950852	3300013297	Miscanthus Rhizosphere	MAPHYTLVSHGTVLGHTGAAFPTDGLPVGAALWHLIPAQGFDLVEPIIAELTALPALSLVEEVSPTPDAYLHPGWSEQGSQMERLMNEAARVHHFRLVLERYEAL
Ga0182007_104073181	3300015262	Rhizosphere	MRTQFALMSHGQVLGYTGAAFSSDELPSDASLWHLVPTEAFGYVEPIIAELTAPPALSLVDDVIPTQDDYLHAARAEHEAQMERLAHEAARIHHFRLVLERYEELDLELRDASGRRVETTSLLVSKQLVSADV
Ga0132258_113146041	3300015371	Arabidopsis Rhizosphere	MTPHYTIVSHGTVLGHTGAAFPTDGLPVGAALWHLIPAQGFDLVEPIIAELTALPALSLVEEVIPTPDAYLHPDRSEQQAQMDRLIKEAARVHRFRLVLERYEALALEL
Ga0132255_1060232191	3300015374	Arabidopsis Rhizosphere	MTAHYTLTSHGTALGHTGAAFPADELPPGAYLWHLIPTRAFDVVEPIIAELTAPPALSLVEEVIPTRDDYL
Ga0190274_102184211	3300018476	Soil	MAIQYTLMSHGKVLGHTGTALPHAELPAGASVWHFMPTAAFDFVEPIIAELTAPPALELLQDVIPTQEAYLHPAWREHEAQMERLAHEAARIHHFRQVLE
Ga0190273_121267241	3300018920	Soil	MTVHYTLMSHGKALGHTGAAFPADELPTGTSAWHLIPTEAFDLVEPIVAELSAPPALALVEDVIPTRDDYLHPAWSEHEG
Ga0173479_102393302	3300019362	Soil	MSMQYTLMSHGEVLGHTGAAFPPDELPAGASVWHLVPTDAFDFVEPIIAELTAPPALSLVEEVIPTQDEYLHPARNEHEAQMERLV
Ga0182009_101136372	3300021445	Soil	MTTQFALMSHGQVLGYTAAAFSSDELPSDASLWHLVPTEAFAYVEPIIAELTAPPALSLVDDVIPTQDDYLHAARAEHEAQMERLAHE
Ga0222622_102283602	3300022756	Groundwater Sediment	MTMQYTLMSHGKVLGHTGAAFPPDELPAGATVWHLVPSTAFDVVEPIIAELTAPPAMTLVEEVIPTQEAYLHPAWHEHEAQMERLTHEAARIHHFRMVLERYEALDLELRDANGRRLETTSLVVTK
Ga0207642_103989182	3300025899	Miscanthus Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWSEQQAQMDRLMDEAARVHHFRLVLERYEGLGL
Ga0207680_101471441	3300025903	Switchgrass Rhizosphere	MSMQYTLMSHGEVLGHTGVAFPPDELPAGTNVWHLVPTAAFDFVEPIIAELTAPPALSLVEDVIPTRDAYLHPARNEHDAQM
Ga0207647_107879381	3300025904	Corn Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLVPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWSEQEAQMDRLMD
Ga0207705_109119911	3300025909	Corn Rhizosphere	MSMQYTLMSHGEVLGHTGVAFPPDELPAGTNVWHLVPTAAFDFVEPIIAELTAPPALSLVEDVIPTRDAYLHPARNEHDAQMERLVDEAARIHHFRLVLERYEGLDLELRDA
Ga0207657_106570602	3300025919	Corn Rhizosphere	MSMQYTLMSHGEVLGHTGVAFPPDELPAGTNVWHLVPTAAFDFVEPIIAELTAPPALSLVEDVIPTRDAYLHPARNEH
Ga0207652_109072421	3300025921	Corn Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLVPTRAFDLVEPIIAELTAPPALSLVEDVIPTRDDYLHPGWGEQQAQMDRLMDEAARVHHFRLVLERYERLGLELHDASGRRVAV
Ga0207690_114327401	3300025932	Corn Rhizosphere	MTGHYTPTSHGTVLGHTGAAFPADELPLGAHLWHLIPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPG
Ga0207706_101936341	3300025933	Corn Rhizosphere	MTAHYTLVSHGTVLGHTGAAFPTDGLPVGALLWHLVPTPAFDLVEPIIAELTAPPALTLVEEVIPTPDAYLHPGWGEQQAQMDRLM
Ga0207706_104713202	3300025933	Corn Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLVPTRAFDLVEPIIAELTAPPALTLVEDVIPTRDDYLHPGFSEQKAQMDRLMDEAAR
Ga0207706_107266051	3300025933	Corn Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDIVEPIIAELTAPPALSLVEDVIPTRDDYLHPGWGEQQAQMDRLMDEAARVHHFRLVLERYEGLGLELH
Ga0207709_116102941	3300025935	Miscanthus Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWSEQQAQM
Ga0207669_100086606	3300025937	Miscanthus Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWSEQQAQMDRLMDEAARVHHFRLVLERYEGLGLALHDGTGRRVAV
Ga0207661_110092011	3300025944	Corn Rhizosphere	MSMQYTLMSHGEVLGYTGAAFPPEGLPAGASVWHLLPTEAFDYVEPIIAELTAPPALALVEEVIPTQDAYLHPAR
Ga0207651_119884121	3300025960	Switchgrass Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWSEQQAQMDRLMDEAARVHHFRLVLERYEALGLELHDFTGRRVA
Ga0207658_104385812	3300025986	Switchgrass Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWSEQQAQMDRLMDEAARVHHFRLVLERYEALGLELHDFTGRRVAVSPMIVKQ
Ga0207703_107468421	3300026035	Switchgrass Rhizosphere	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWSEQQAQMDRLMDEAARVHHFRLVLERYEGLGLAL
Ga0207703_122631691	3300026035	Switchgrass Rhizosphere	MSMQYTLMSHGEVLGHTGAAFPPDELPAGTSVWHLVPTAAFDFVEPIIAELTAPPALSLVEDVIPTRDAYLHPARNEHDAQMERLVHEAARIHHFRLVLERYEGLDLELRDARGRRVAATTLLVSKQMVSADALH
Ga0207708_109482101	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTMHYTLMSHGKVLGHTAAAFPPEELPAGASVWYLVPTAAFDFVEPIIAELTAPPAVALVEEVIPTQDAYLHPAWGEH
Ga0207683_102889971	3300026121	Miscanthus Rhizosphere	MSMQYTLMSHGEVLGHTGVAFPPDELPAGTNVWHLVPTAAFDFVEPIIAELTAPPALSLVEDVIPTRDAYLHPA
Ga0207683_105720182	3300026121	Miscanthus Rhizosphere	MTMHYTLMSHGKVLGHTAAAFPPEELPAGASVWHLVPSAAFDFVEPIIAELTAPPAVALVEEVIPTQDDYLHPAWREQDAQMERLVHEAARIHHFRAVLE
Ga0268264_119478991	3300028381	Switchgrass Rhizosphere	MSMQYTLMSHGEVLGHTGVAFPPDELPAGTNVWHLVPTAAFDFVEPIIAELTAPPALSLVEDVIPTRDAYLHPARNEHDAQMERLVDEAARIHHFRLVLERYEGLDLELRDACGRRVAATTLLVSKQMVSADA
Ga0307300_103667051	3300028880	Soil	MSMQYTLMSHGEVLGYTGAAFPPEGLPAGASVWHLLPTAAFDYVEPIIAELTAPPALSLVEEVIPTQDAYLHPARREQEAQMERLVDEAARIHHFR
Ga0307408_1007477282	3300031548	Rhizosphere	MTAHYTLTSHGTVLGHTGAEFPAEELPPGACLWHLIPTRAFDLVEPIIAELTAPPALSLVEEVIPTRDDYLHPGWSAQQAQMDRLMDEAARVHHFRLVLERYEALGLELHDATGRRVAVSPMI
Ga0307408_1013227602	3300031548	Rhizosphere	MTTHYILVSHGRVLGYTGAAFPSGELPDGTSAWHFVPAAAFDAVEPIVAELSAPPALSLVQEVLPTQDEYLHPAWSEHETQMERLMEEAPRIHHFR
Ga0307408_1018968511	3300031548	Rhizosphere	MTMHYLLVSRGRVLGRTGAAFPAGELPAGTSAWHLVPSAAFDAVEPIIAELSAPPALSLVEDVIPTQDAYLHPAWREHEAQLERLLNEAPRIHHFRLVLERYEALRLELRDQSGRRVPTATLVVTKQL
Ga0310904_112233011	3300031854	Soil	MTMHYTLMSHGKVLGHTAAAFPPEELPAGASVWHLVPTAAFDLVEPIIAELTAPPALALVEDVIPTQEAYLHPARGEHEAQMERLAREAARIHHFRLVLERYEALDLELRDAAGHRLETASLTVTKQTVTADALR
Ga0307407_103755781	3300031903	Rhizosphere	MTTHYILVSHGRVLGYTGAAFPSGELPDGTSAWHFVPAAAFDAVEPIVAELSAPPALSLVQEVLPTQDEYLHPAWNEHETQLERLM
Ga0308175_1011250552	3300031938	Soil	MTMQYTLISHGKVLGHTGAVLPSDELPAGASVWHFIPDAAFDLVEPVIAELTAPPALALVEDVIPTQDAYLHPAWNEHEAEMERLVDEAPRIHH
Ga0308175_1027088141	3300031938	Soil	MAMQYTLMSHGKVLGHTGAVLPSDELPAGASVWHFMPNDAFELVEPVIAELTAPPALALVQEVIPTQDAYLHPVWSEHEAEMERLVDEAPRIHHFRVVLERFE
Ga0308174_116813331	3300031939	Soil	MAMQYTLMSHGKVLGHTGAVLPSDELPAGASVWHFMPNDAFELVEPVIAELTAPPALALVQEVIPTQDAYLHPVWSEHEAEMERLVDEAPRIHHFRLVLERFEGLRLEL
Ga0307409_1004351532	3300031995	Rhizosphere	MTMHYTLMSHGKVLGHTAAAFPAEELPAGASVWHLVPGAAFDFVEPIIAELTAPPAVALVEEVIFAQDAYLHPARREHHAQMERLVHEAARIHHFRVVLERYEALDLELRDASGRRLATTSIIVTKQT
Ga0307409_1016022032	3300031995	Rhizosphere	MAMHYALMSHGRVLGHTAAEFPAHELPAGMTAWHFVPTPAFAAVEPIVAELSAPPALSLVEEVLPTQDEYLHPAWSEHEAQIERLMSEAPRIHHFRLVLERYESLDLELRDAAGRRLPTA
Ga0308176_100721064	3300031996	Soil	MTMQYTLISHGKVLGHTGAVLPSDELPAGASVWHFIPDAAFDLVEPVIAELTAPPALALVEDVIPTQDAYLHPAWNEHEAEMERLVDEAPRIHHFRLVLERFEGLRLELHDAGGHRLDTATLIVTK
Ga0308176_117711831	3300031996	Soil	MPMQYALMSHGEVLGYTGAALASDELPSGASLWHLVPTEAFDFVEPIIAELTAPPALALVEDVIPEQDAYLHPGWNEHEEQMERLVHEAARIHHFRLVLERYEELELELRDTAGC
Ga0307416_1015929331	3300032002	Rhizosphere	MTTHYILVSHGRVLGYTGAAFPSGELPDGTSAWHFVPAPAFDAVEPIVAELSAPPALSLVQEVLPTQDEYLHPAWSEHETQMERLMEEAPRIHH
Ga0307411_111652142	3300032005	Rhizosphere	MTTHYILVSHGRVLGYTGAAFPSGELPDGTSAWHFVPAAAFDAVEPIVAELSAPPALSLVQEVLPTQDEYLHPAWSEHETQLERLM
Ga0308173_121373491	3300032074	Soil	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLVPTRAFDLVEPIIAELTAPPALSLVEDVIPTRDDYLHPGWGEQQAQMDRLM
Ga0307415_1019833102	3300032126	Rhizosphere	MTTHYILVSHGRVLGYTGAAFPSGELPDGTSAWHFVPAAAFDAVEPIVAELSAPPALSLVQEVLPTQDEY
Ga0310811_102860041	3300033475	Soil	MTAHYTLTSHGTVLGHTGAAFPADELPPGAYLWHLIPTRAFDIVEPIIAELTAPPALSLVEDVIPTRDDYLHPGWGEQQAQMDRLMDEAARVHHFRLVLERYEGLGLE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093919

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences