NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F093905

Metagenome / Metatranscriptome Family F093905

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F093905
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 56 residues
Representative Sequence MKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK
Number of Associated Samples 90
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 46.23 %
% of genes from short scaffolds (< 2000 bps) 88.68 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (81.132 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(25.472 % of family members)
Environment Ontology (ENVO) Unclassified
(86.792 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(90.566 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 67.92%    β-sheet: 0.00%    Coil/Unstructured: 32.08%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF00118Cpn60_TCP1 3.77
PF00166Cpn10 1.89
PF13619KTSC 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 3.77
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 1.89


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A81.13 %
All OrganismsrootAll Organisms18.87 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000115|DelMOSum2011_c10115332Not Available851Open in IMG/M
3300000116|DelMOSpr2010_c10109548All Organisms → Viruses → Predicted Viral1021Open in IMG/M
3300000116|DelMOSpr2010_c10199508Not Available642Open in IMG/M
3300000116|DelMOSpr2010_c10267348Not Available513Open in IMG/M
3300000117|DelMOWin2010_c10040590All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon2154Open in IMG/M
3300000117|DelMOWin2010_c10139386Not Available817Open in IMG/M
3300000212|SI47jul10_120mDRAFT_c1008293Not Available3091Open in IMG/M
3300000250|LPfeb09P261000mDRAFT_1015115Not Available1371Open in IMG/M
3300000930|BpDRAFT_10338120Not Available901Open in IMG/M
3300001346|JGI20151J14362_10038219All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon2232Open in IMG/M
3300001346|JGI20151J14362_10125609Not Available818Open in IMG/M
3300001450|JGI24006J15134_10191507Not Available632Open in IMG/M
3300001460|JGI24003J15210_10105055Not Available800Open in IMG/M
3300001472|JGI24004J15324_10138478Not Available576Open in IMG/M
3300001952|GOS2224_1026258All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1584Open in IMG/M
3300002524|JGI24927J35514_1020730Not Available505Open in IMG/M
3300003478|JGI26238J51125_1002243Not Available6485Open in IMG/M
3300003618|JGI26381J51731_1025484Not Available1567Open in IMG/M
3300005512|Ga0074648_1002585Not Available16182Open in IMG/M
3300006402|Ga0075511_1625721Not Available620Open in IMG/M
3300006425|Ga0075486_1675481Not Available523Open in IMG/M
3300006617|Ga0101443_134835All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium4303Open in IMG/M
3300006735|Ga0098038_1067014All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1275Open in IMG/M
3300006735|Ga0098038_1223741Not Available602Open in IMG/M
3300006737|Ga0098037_1268630Not Available543Open in IMG/M
3300006749|Ga0098042_1001396Not Available9183Open in IMG/M
3300006749|Ga0098042_1024541Not Available1748Open in IMG/M
3300006920|Ga0070748_1281597Not Available593Open in IMG/M
3300006921|Ga0098060_1147892Not Available652Open in IMG/M
3300006921|Ga0098060_1160374Not Available621Open in IMG/M
3300007276|Ga0070747_1313273Not Available538Open in IMG/M
3300007725|Ga0102951_1103312Not Available808Open in IMG/M
3300009027|Ga0102957_1369966Not Available532Open in IMG/M
3300009071|Ga0115566_10125409Not Available1626Open in IMG/M
3300009193|Ga0115551_1513762Not Available510Open in IMG/M
3300009420|Ga0114994_10100399Not Available1971Open in IMG/M
3300009422|Ga0114998_10463862Not Available593Open in IMG/M
3300009425|Ga0114997_10066796All Organisms → Viruses → Predicted Viral2264Open in IMG/M
3300009435|Ga0115546_1221489All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon652Open in IMG/M
3300009495|Ga0115571_1417422Not Available521Open in IMG/M
3300009496|Ga0115570_10343502Not Available640Open in IMG/M
3300009705|Ga0115000_10706529Not Available622Open in IMG/M
3300009785|Ga0115001_10331935Not Available960Open in IMG/M
3300009785|Ga0115001_10590662Not Available679Open in IMG/M
3300010150|Ga0098056_1135419All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon834Open in IMG/M
3300012953|Ga0163179_10903058Not Available764Open in IMG/M
3300017708|Ga0181369_1094970Not Available623Open in IMG/M
3300017710|Ga0181403_1123433Not Available540Open in IMG/M
3300017713|Ga0181391_1121925Not Available584Open in IMG/M
3300017725|Ga0181398_1032950All Organisms → Viruses → Predicted Viral1272Open in IMG/M
3300017728|Ga0181419_1098267Not Available722Open in IMG/M
3300017728|Ga0181419_1150863Not Available556Open in IMG/M
3300017729|Ga0181396_1030787All Organisms → Viruses → Predicted Viral1069Open in IMG/M
3300017730|Ga0181417_1172563Not Available520Open in IMG/M
3300017737|Ga0187218_1047968Not Available1068Open in IMG/M
3300017740|Ga0181418_1021222All Organisms → Viruses → Predicted Viral1694Open in IMG/M
3300017746|Ga0181389_1195837Not Available523Open in IMG/M
3300017752|Ga0181400_1031172All Organisms → Viruses → Predicted Viral1715Open in IMG/M
3300017759|Ga0181414_1129701Not Available661Open in IMG/M
3300017759|Ga0181414_1140280Not Available632Open in IMG/M
3300017765|Ga0181413_1201217Not Available595Open in IMG/M
3300017765|Ga0181413_1268798Not Available500Open in IMG/M
3300017769|Ga0187221_1073884Not Available1066Open in IMG/M
3300017771|Ga0181425_1157693Not Available718Open in IMG/M
3300017771|Ga0181425_1284538All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon508Open in IMG/M
3300017776|Ga0181394_1152622Not Available717Open in IMG/M
3300017779|Ga0181395_1164981Not Available695Open in IMG/M
3300017781|Ga0181423_1255454Not Available654Open in IMG/M
3300017782|Ga0181380_1195497Not Available679Open in IMG/M
3300020165|Ga0206125_10377530Not Available519Open in IMG/M
3300020421|Ga0211653_10092594All Organisms → Viruses → Predicted Viral1347Open in IMG/M
3300020428|Ga0211521_10409757Not Available591Open in IMG/M
3300020438|Ga0211576_10607595Not Available544Open in IMG/M
3300020452|Ga0211545_10308627Not Available723Open in IMG/M
3300021365|Ga0206123_10264593Not Available743Open in IMG/M
3300021389|Ga0213868_10158329All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1394Open in IMG/M
3300021957|Ga0222717_10586886Not Available586Open in IMG/M
3300021958|Ga0222718_10593575Not Available520Open in IMG/M
3300021959|Ga0222716_10362865Not Available853Open in IMG/M
3300021959|Ga0222716_10615207Not Available590Open in IMG/M
3300021964|Ga0222719_10677277Not Available586Open in IMG/M
3300022068|Ga0212021_1111844Not Available559Open in IMG/M
3300022164|Ga0212022_1070659Not Available536Open in IMG/M
3300022164|Ga0212022_1071673Not Available532Open in IMG/M
3300025086|Ga0208157_1034923Not Available1429Open in IMG/M
3300025086|Ga0208157_1056476All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1038Open in IMG/M
3300025098|Ga0208434_1098345Not Available575Open in IMG/M
3300025101|Ga0208159_1010684Not Available2486Open in IMG/M
3300025102|Ga0208666_1002729Not Available7264Open in IMG/M
3300025120|Ga0209535_1015808Not Available3993Open in IMG/M
3300025632|Ga0209194_1105091Not Available710Open in IMG/M
3300025645|Ga0208643_1038077All Organisms → Viruses → Predicted Viral1542Open in IMG/M
3300025652|Ga0208134_1041725All Organisms → Viruses → Predicted Viral1520Open in IMG/M
3300025688|Ga0209140_1151709Not Available677Open in IMG/M
3300025869|Ga0209308_10258970Not Available743Open in IMG/M
3300026183|Ga0209932_1080350Not Available743Open in IMG/M
3300027298|Ga0208970_1004528All Organisms → Viruses → Predicted Viral3168Open in IMG/M
3300027779|Ga0209709_10157370Not Available1106Open in IMG/M
3300027791|Ga0209830_10250889Not Available803Open in IMG/M
(restricted) 3300027861|Ga0233415_10399322Not Available658Open in IMG/M
3300028198|Ga0257121_1127907Not Available885Open in IMG/M
3300031626|Ga0302121_10113663Not Available789Open in IMG/M
3300031766|Ga0315322_10806179Not Available579Open in IMG/M
3300031766|Ga0315322_10944965Not Available520Open in IMG/M
3300032073|Ga0315315_11790404Not Available522Open in IMG/M
3300033742|Ga0314858_065156Not Available900Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine25.47%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater20.75%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous8.49%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine6.60%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine6.60%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine5.66%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water4.72%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine3.77%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater2.83%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.89%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.89%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water1.89%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.94%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine0.94%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine0.94%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.94%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.94%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water0.94%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.94%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine0.94%
WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water0.94%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment0.94%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300000212Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 47 07/07/10 120mEnvironmentalOpen in IMG/M
3300000250Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - February 2009 P26 1000mEnvironmentalOpen in IMG/M
3300000930Marine microbial communities from the coastal margin of the Columbia River, USA - 33 PSU, 16mEnvironmentalOpen in IMG/M
3300001346Pelagic Microbial community sample from North Sea - COGITO 998_met_01EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300001952Marine microbial communities from Newport Harbor, Rhode Island, USA - GS008EnvironmentalOpen in IMG/M
3300002524Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C49A8_35EnvironmentalOpen in IMG/M
3300003478Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNAEnvironmentalOpen in IMG/M
3300003618Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_165m_DNAEnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300006402Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006425Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006617Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ09 time pointEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006749Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaGEnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007725Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MGEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009496Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524EnvironmentalOpen in IMG/M
3300009705Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128EnvironmentalOpen in IMG/M
3300009785Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130EnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017725Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017729Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11EnvironmentalOpen in IMG/M
3300017730Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13EnvironmentalOpen in IMG/M
3300017737Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2)EnvironmentalOpen in IMG/M
3300017740Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017752Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017769Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)EnvironmentalOpen in IMG/M
3300017771Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300017779Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16EnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020421Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020452Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)EnvironmentalOpen in IMG/M
3300021365Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022164Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v2)EnvironmentalOpen in IMG/M
3300025086Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025101Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025102Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025632Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025688Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_120m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025869Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)EnvironmentalOpen in IMG/M
3300026183Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027298Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C49A8_35 (SPAdes)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027791Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)EnvironmentalOpen in IMG/M
3300027861 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MGEnvironmentalOpen in IMG/M
3300028198Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_100EnvironmentalOpen in IMG/M
3300031626Marine microbial communities from Western Arctic Ocean, Canada - CB21_surfaceEnvironmentalOpen in IMG/M
3300031766Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 21515EnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2011_1011533243300000115MarineMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIVLEANNLMPKELLTNKIK*
DelMOSpr2010_1010954823300000116MarineMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDXALEANNLMPKELLTNKIK*
DelMOSpr2010_1019950813300000116MarineKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNRIK*
DelMOSpr2010_1026734813300000116MarineVKLKTMKHIPKKEFNRFYTIMKNNPGNSVIENHVLYQKELALEANNLMPKELLTNKIK*
DelMOWin2010_1004059053300000117MarineMKHISKKEFNDFYTIMKNNSDKSVLEVYNLYKSLRANNLMPKELISNKIK*
DelMOWin2010_1013938623300000117MarineMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK*
SI47jul10_120mDRAFT_1008293103300000212MarineMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLIPKELITNKIK*
LPfeb09P261000mDRAFT_101511553300000250MarineINDNINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK*
BpDRAFT_1033812043300000930Freshwater And MarineMKHIPKKEFNRFYTIMKNNPGNTVLENHELYKKELALEANNLMPKELITNKIK*
JGI20151J14362_1003821923300001346Pelagic MarineMKHISKKEFNDFYTIMKNNSDKSVLEVYNLYKSLRANNLMPKELINNKIK*
JGI20151J14362_1012560913300001346Pelagic MarineMKHIPKKEFNRFYTIMKNNPGKSVLEXHNLYKKDIALEANNLMXKELITNKIK*
JGI24006J15134_1019150713300001450MarineFNRFYTIMKNNPKNTVIENHALYQKELAKATEALEANNLMSKELLTNKIK*
JGI24003J15210_1010505523300001460MarineMKHIPKKEFNRFYTIMKNNPGNSVIENHVLYQKELALEANNLMPKELLTNKIK*
JGI24004J15324_1013847833300001472MarineMKHIPKKEFNRFYTIMKNNPKNTVIENHALYQKELAKATEALEANNLMSKELLTNKIK*
GOS2224_102625833300001952MarineMKHISKKEFNDFYTIMKNNSDKSVLEVYNLYRSLKANNLMPKELISNKIK*
JGI24927J35514_102073013300002524MarineLNNDNINVKLKTMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK*
JGI26238J51125_100224313300003478MarineMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK*
JGI26381J51731_102548463300003618MarineMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK*
Ga0074648_1002585183300005512Saline Water And SedimentMKHINKKEFNDFYTIMKNNSDKSVLEVYNLYKSLRANNLMPKELISNKIK*
Ga0075511_162572113300006402AqueousKHISKKEFNDFYTIMKNNSDKSVLEVYNLYKSLRANNLMPKELISNKIK*
Ga0075486_167548113300006425AqueousFNDFYTIMKNNSDKSVLEVYNLYKSLRANNLMPKELISNKIK*
Ga0101443_134835103300006617Marine Surface WaterMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKDIALEANNLMPKELLTNKIK*
Ga0098038_106701443300006735MarineMKHINKKEFNDFYTIMKNNSDKSVMEVYNLYKNLKANNLMPKELLTNKIK*
Ga0098038_122374113300006735MarineMKHISKKEFDRFFTIMKNNPGNTVLENHELYKKEVALEANNLMPKELLTNKIK*
Ga0098037_126863013300006737MarineRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK*
Ga0098042_100139653300006749MarineMKHINKKEFNDFYTIMKNNSDKSVMEVYTLYKNLKANNLMPKELLTNKIK*
Ga0098042_102454123300006749MarineMKHISKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELITNKIK*
Ga0070748_128159713300006920AqueousMKHINKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANSLMPKELLTNKIK*
Ga0098060_114789213300006921MarineTMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK*
Ga0098060_116037413300006921MarineEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK*
Ga0070747_131327313300007276AqueousMKHIPKKEFNRFYTIMKNNPGKSVIENHVLYQKELALEANNLMPKELLTNKIK*
Ga0102951_110331213300007725WaterNDNINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELITNKIK*
Ga0102957_136996613300009027Pond WaterIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK*
Ga0115566_1012540933300009071Pelagic MarineMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELITNKIK*
Ga0115551_151376213300009193Pelagic MarineLRLINDNINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELITNKIK*
Ga0114994_1010039933300009420MarineLIKDNINVKTITMKHINKKEFNRFYTIMKENPGNSVIENHVLYSKERALEANNLMPKELLTNKIK*
Ga0114998_1046386223300009422MarineMKITNQKEFNRFYTIMKNNPGNSVIENHVLYSKELALETNNLMPKELLTNKIK*
Ga0114997_1006679643300009425MarineLNNDNINVKTITMKHINKKEFNRFYTIMKENPGNSVIENHVLYSKERALEANNLMPKELLTNKIK*
Ga0115546_122148913300009435Pelagic MarineKKEFNDFYTIMKNNSDKSVLEVYNLYKSLRANNLMPKELINNKIK*
Ga0115571_141742233300009495Pelagic MarineDNINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKDIALEANNLMPKELITNKIK*
Ga0115570_1034350233300009496Pelagic MarineMKITNQKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELITNKIK*
Ga0115000_1070652933300009705MarineNDNNNVKLKTMKHINKKEFNRFYTIMKENPGNSVIENHVLYSKERALEANNLMPKELLTNKIK*
Ga0115001_1033193513300009785MarineLNNDNINVKTITMKHINKKEFNRFYTIMKENPGNSVIENHVLYSKELALEANNLMPKELLTNKIK*
Ga0115001_1059066213300009785MarineMKITNQKEFNRFYTIMKNNPGNSVIENHVLYSKELALEANNLMPKELLTNKIK*
Ga0098056_113541913300010150MarineKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK
Ga0163179_1090305853300012953SeawaterNRFYTIMKNNPGKSVLEIHNLYKKDIALEANNLMPKELLTNKIK*
Ga0181369_109497013300017708MarineIDNINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK
Ga0181403_112343333300017710SeawaterLRLINDNINVKLKTMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK
Ga0181391_112192513300017713SeawaterMKHISKKEFNRFYTIMKNNPENTILENHELYKKELALEANNLMPKELLTNKIK
Ga0181398_103295013300017725SeawaterLRSINDNINVKLKTMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK
Ga0181419_109826713300017728SeawaterKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELITNKIK
Ga0181419_115086313300017728SeawaterKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK
Ga0181396_103078713300017729SeawaterTMKHIPKKEFNRFYTIMKNNPGNTVLENHELYKKDIALEANNLMPKELLTNKIK
Ga0181417_117256323300017730SeawaterMKHISKKEFNRFYTIMKNNPGKSVLEVHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK
Ga0187218_104796813300017737SeawaterMKHISKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK
Ga0181418_102122213300017740SeawaterLRLINDNINVKLKTMKHIPKKEFNRFYTIMKNNPGNTVLENHELYKKDIALEANNLMPKELLTNKIK
Ga0181389_119583713300017746SeawaterMKHIPKKEFNRFYTIMKNNPGNTVLENHELYKKDIALEANNLMPKEL
Ga0181400_103117213300017752SeawaterNVKLKTMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK
Ga0181414_112970143300017759SeawaterNDNINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELLTNKIK
Ga0181414_114028013300017759SeawaterNINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKI
Ga0181413_120121713300017765SeawaterTMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLKKKDIALEANNLMPKELLTNKIK
Ga0181413_126879813300017765SeawaterMKHISKKEFNRFYTIMKNNPENTILENHELYKKELALEANNLMSKELLTNKIK
Ga0187221_107388423300017769SeawaterMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMP
Ga0181425_115769333300017771SeawaterINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELLTNKIK
Ga0181425_128453813300017771SeawaterINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKDMALEANNLMPKELITNKIK
Ga0181394_115262233300017776SeawaterMKNNPGKSVLEVHNLYKKENKQIEKDMLNTAIALEANNLMPKELITNKIK
Ga0181395_116498123300017779SeawaterMKHISKKEFNRFYTIMKNNPENTILENHELYKKELALEANNLMPKELITNKIK
Ga0181423_125545413300017781SeawaterLRLNNDNINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK
Ga0181380_119549733300017782SeawaterMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKEL
Ga0206125_1037753013300020165SeawaterMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK
Ga0211653_1009259443300020421MarineMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELITNKIK
Ga0211521_1040975743300020428MarineKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK
Ga0211576_1060759513300020438MarineFNRFYTIMKNNPGKSVLEVHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK
Ga0211545_1030862743300020452MarineLRLNNDNNNVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK
Ga0206123_1026459323300021365SeawaterMKHISKKEFNDFYTIMKNNSDKSVLEVYNLYKSLRANNLMPKELINNKIK
Ga0213868_1015832943300021389SeawaterMKHISKKEFNDFYTIMKNNSDKSVLEVYNLYKSLRANNLMPKELISNKIK
Ga0222717_1058688613300021957Estuarine WaterNINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKENEQIEKDMLNTAIALEANNLMPKELLTNKIK
Ga0222718_1059357523300021958Estuarine WaterMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK
Ga0222716_1036286533300021959Estuarine WaterMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKENEQIEKDMLNTAIALEANNLMPKELLTNKIK
Ga0222716_1061520733300021959Estuarine WaterMKHIPKKEFNRFYTIMKNNPGNTVLENHELYKKELALEANNLMPKELITNKIK
Ga0222719_1067727733300021964Estuarine WaterITMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK
Ga0212021_111184413300022068AqueousINVKLKTMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK
Ga0212022_107065913300022164AqueousMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNRIK
Ga0212022_107167323300022164AqueousLRSINDNINVKTITMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK
Ga0208157_103492333300025086MarineMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELITNKIN
Ga0208157_105647643300025086MarineMKHINKKEFNDFYTIMKNNSDKSVMEVYNLYKNLKANNLMPKELLTNKIK
Ga0208434_109834523300025098MarineMKHINKKEFNDFYTIMKNNSDKSVMEVYTLYKNLKANNLMPKELLTNKIK
Ga0208159_101068423300025101MarineMKHISKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELITNKIK
Ga0208666_100272923300025102MarineMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKDIALEANNLMPKELLTNKIK
Ga0209535_101580823300025120MarineMKHIPKKEFNRFYTIMKNNPGNTVIENHVLYQKELALEANNLMPKELLTNKIK
Ga0209194_110509133300025632Pelagic MarineMKHISKKEFNDFYTIMKDNSDKSVLEVYNLYKSLRANNLMPKELINNKIK
Ga0208643_103807713300025645AqueousKLKTMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK
Ga0208134_104172523300025652AqueousMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIVLEANNLMPKELLTNKIK
Ga0209140_115170913300025688MarineMKHIPKKEFNRFYTIMKNNPGNTVLENHELYKKENEQIEKDMLNTAIALEANNLMPKELITNKIK
Ga0209308_1025897033300025869Pelagic MarineMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLM
Ga0209932_108035013300026183Pond WaterFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK
Ga0208970_1004528103300027298MarineNDNINVKLKTMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKDIALEANNLMPKELLTNKIK
Ga0209709_1015737013300027779MarineMKHINKKEFNRFYTIMKENPGNSVIENHVLYSKERALEANNLMPKELLTNKIK
Ga0209830_1025088923300027791MarineMKHINKKEFNRFYTIMKENPGNSVIENHVLYSKELALEANNLMPKELLTNKIK
(restricted) Ga0233415_1039932233300027861SeawaterMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEQDMLDTAIALEANNLMPKELINNKIK
Ga0257121_112790733300028198MarineMKHIPKKEFNRFYTIMKNNPGKSVLEIHNLYKKENEQIEKDMLNTAIALEANNLMPKELI
Ga0302121_1011366333300031626MarineMKITNQKEFNRFYTIMKNNPGNSVIENHVLYSKELALEANNLMPKELLTNKIK
Ga0315322_1080617913300031766SeawaterNRFYTIMKNNPGKSVLEVHNLYKKENEQIEKDMLNTAIALEANNLMPKELLTNKIK
Ga0315322_1094496513300031766SeawaterMKHIPKKEFNRFYTIMKNNPGKSVLEVHNLYKKENEQIEKDMLNTAIALEANNLMPK
Ga0315315_1179040423300032073SeawaterMKHIPKKEFNRFYTIMKNNPGNTVLENHELYKKDIALEANNLMPKELLTNKIK
Ga0314858_065156_692_8893300033742Sea-Ice BrineLNNDNNNVKLKTMKHINKKEFNRFYTIMKENPGNSVIENHVLYSKERALEANNLMPKELLINKIK


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