Metagenome / Metatranscriptome Family F093865

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093865
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	55 residues
Representative Sequence	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIRLMIGRGLTCQNGAIESVCVELVCEHL
Number of Associated Samples	94
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	5.77 %
% of genes near scaffold ends (potentially truncated)	48.11 %
% of genes from short scaffolds (< 2000 bps)	91.51 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.943 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (24.528 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (55.660 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 44.83% β-sheet: 1.72% Coil/Unstructured: 53.45%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF13302	Acetyltransf_3	34.91
PF13239	2TM	8.49
PF00583	Acetyltransf_1	5.66
PF09932	DUF2164	1.89
PF01810	LysE	1.89
PF01389	OmpA_membrane	1.89
PF12850	Metallophos_2	0.94
PF07883	Cupin_2	0.94
PF01400	Astacin	0.94
PF01695	IstB_IS21	0.94
PF14294	DUF4372	0.94
PF07813	LTXXQ	0.94
PF04828	GFA	0.94
PF13449	Phytase-like	0.94
PF00892	EamA	0.94
PF00144	Beta-lactamase	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.77
COG2885	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	Cell wall/membrane/envelope biogenesis [M]	1.89
COG3637	Opacity protein LomR and related surface antigens	Cell wall/membrane/envelope biogenesis [M]	1.89
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.94
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.94
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.94
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.94
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.94 %
All Organisms	root	All Organisms	49.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.94 %
cellular organisms	root	All Organisms → cellular organisms	49.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.94 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	21.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.94 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	17.92 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.94 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	12.26 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	0.94 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %
beta proteobacterium SCGC AAA027-I06	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium SCGC AAA027-I06	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.94 %
Limnohabitans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	12.26 %
Polynucleobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	0.94 %
Burkholderiales bacterium JOSHI_001	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium JOSHI_001	0.94 %
Solimicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Solimicrobium	0.94 %
beta proteobacterium SCGC AAA027-I06	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium SCGC AAA027-I06	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.94 %
unclassified Limnohabitans	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans	10.38 %
Solimicrobium silvestre	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Solimicrobium → Solimicrobium silvestre	0.94 %
Polynucleobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	0.94 %
Burkholderiales bacterium JOSHI_001	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium JOSHI_001	0.94 %
beta proteobacterium SCGC AAA027-I06	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium SCGC AAA027-I06	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.94 %
Limnohabitans sp. MMS-10A-178	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. MMS-10A-178	9.43 %
Limnohabitans sp. 2KL-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. 2KL-17	0.94 %
Solimicrobium silvestre	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Solimicrobium → Solimicrobium silvestre	0.94 %
Polynucleobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	0.94 %
Burkholderiales bacterium JOSHI_001	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium JOSHI_001	0.94 %
beta proteobacterium SCGC AAA027-I06	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium SCGC AAA027-I06	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000268\|M3P_10170141	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300000268\|M3P_10221615	Not Available	550	Open in IMG/M
3300000756\|JGI12421J11937_10075987	Not Available	987	Open in IMG/M
3300000929\|NpDRAFT_10143157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2173	Open in IMG/M
3300001282\|B570J14230_10041950	All Organisms → cellular organisms → Bacteria → Proteobacteria	1561	Open in IMG/M
3300002408\|B570J29032_109197592	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300003388\|JGI25910J50241_10144448	Not Available	623	Open in IMG/M
3300003411\|JGI25911J50253_10063908	Not Available	1211	Open in IMG/M
3300004054\|Ga0063232_10177969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. MMS-10A-178	628	Open in IMG/M
3300004123\|Ga0066181_10094929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. MMS-10A-178	820	Open in IMG/M
3300004767\|Ga0007750_1529106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. MMS-10A-178	505	Open in IMG/M
3300004769\|Ga0007748_11459096	Not Available	572	Open in IMG/M
3300004773\|Ga0007795_10218636	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300005517\|Ga0070374_10116691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. MMS-10A-178	1389	Open in IMG/M
3300005941\|Ga0070743_10246876	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300006484\|Ga0070744_10031204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1576	Open in IMG/M
3300006805\|Ga0075464_10104352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → beta proteobacterium SCGC AAA027-I06	1632	Open in IMG/M
3300007545\|Ga0102873_1045492	Not Available	1345	Open in IMG/M
3300007547\|Ga0102875_1157395	Not Available	712	Open in IMG/M
3300007548\|Ga0102877_1160396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium JOSHI_001	635	Open in IMG/M
3300007560\|Ga0102913_1102228	Not Available	929	Open in IMG/M
3300007590\|Ga0102917_1219282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. 2KL-17	662	Open in IMG/M
3300007593\|Ga0102918_1078105	Not Available	971	Open in IMG/M
3300007600\|Ga0102920_1278942	Not Available	538	Open in IMG/M
3300007603\|Ga0102921_1298946	Not Available	574	Open in IMG/M
3300007620\|Ga0102871_1022735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Solimicrobium → Solimicrobium silvestre	1889	Open in IMG/M
3300007621\|Ga0102872_1100528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. MMS-10A-178	775	Open in IMG/M
3300007625\|Ga0102870_1118215	Not Available	769	Open in IMG/M
3300007634\|Ga0102901_1061387	Not Available	1085	Open in IMG/M
3300007639\|Ga0102865_1021979	All Organisms → cellular organisms → Bacteria → Proteobacteria	1828	Open in IMG/M
3300007642\|Ga0102876_1135408	Not Available	661	Open in IMG/M
3300007642\|Ga0102876_1186933	Not Available	550	Open in IMG/M
3300007706\|Ga0102899_1138089	Not Available	603	Open in IMG/M
3300007708\|Ga0102859_1032332	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300008259\|Ga0114841_1046605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. MMS-10A-178	2131	Open in IMG/M
3300008961\|Ga0102887_1133537	Not Available	773	Open in IMG/M
3300008996\|Ga0102831_1136994	Not Available	813	Open in IMG/M
3300009068\|Ga0114973_10064252	Not Available	2137	Open in IMG/M
3300009068\|Ga0114973_10517308	Not Available	617	Open in IMG/M
3300009086\|Ga0102812_10757102	Not Available	537	Open in IMG/M
3300009151\|Ga0114962_10142355	Not Available	1449	Open in IMG/M
3300009152\|Ga0114980_10069436	All Organisms → cellular organisms → Bacteria → Proteobacteria	2122	Open in IMG/M
3300009158\|Ga0114977_10140314	Not Available	1445	Open in IMG/M
3300009164\|Ga0114975_10556884	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300009180\|Ga0114979_10303217	Not Available	948	Open in IMG/M
3300009180\|Ga0114979_10627414	Not Available	613	Open in IMG/M
3300009182\|Ga0114959_10235943	Not Available	933	Open in IMG/M
3300009182\|Ga0114959_10594745	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300009187\|Ga0114972_10189148	All Organisms → cellular organisms → Bacteria → Proteobacteria	1278	Open in IMG/M
3300009684\|Ga0114958_10082397	Not Available	1676	Open in IMG/M
3300010885\|Ga0133913_11727735	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300012348\|Ga0157140_10032160	Not Available	562	Open in IMG/M
3300012772\|Ga0138287_1001455	Not Available	617	Open in IMG/M
3300012773\|Ga0138290_1206838	Not Available	501	Open in IMG/M
3300013006\|Ga0164294_10356655	Not Available	1007	Open in IMG/M
3300018815\|Ga0187845_1052747	All Organisms → cellular organisms → Bacteria → Proteobacteria	1420	Open in IMG/M
3300018815\|Ga0187845_1271354	Not Available	536	Open in IMG/M
3300020141\|Ga0211732_1374473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	829	Open in IMG/M
3300020160\|Ga0211733_10046395	Not Available	1122	Open in IMG/M
3300020229\|Ga0194042_1166495	Not Available	596	Open in IMG/M
3300020508\|Ga0208225_1019023	All Organisms → cellular organisms → Bacteria → Proteobacteria	886	Open in IMG/M
3300020565\|Ga0208718_1022519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1274	Open in IMG/M
3300021072\|Ga0194057_10188938	Not Available	727	Open in IMG/M
3300021079\|Ga0194055_10177087	Not Available	871	Open in IMG/M
3300021600\|Ga0194059_1255100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. MMS-10A-178	524	Open in IMG/M
3300021602\|Ga0194060_10086979	Not Available	1741	Open in IMG/M
3300021963\|Ga0222712_10123040	Not Available	1784	Open in IMG/M
3300023184\|Ga0214919_10286016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1149	Open in IMG/M
3300023184\|Ga0214919_10424974	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300024343\|Ga0244777_10803645	All Organisms → cellular organisms → Bacteria → Proteobacteria	555	Open in IMG/M
3300027156\|Ga0255078_1091495	Not Available	582	Open in IMG/M
3300027193\|Ga0208800_1010191	Not Available	1194	Open in IMG/M
3300027220\|Ga0208927_1024868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. MMS-10A-178	1162	Open in IMG/M
3300027222\|Ga0208024_1032470	Not Available	1020	Open in IMG/M
3300027244\|Ga0208173_1015050	All Organisms → cellular organisms → Bacteria → Proteobacteria	1553	Open in IMG/M
3300027302\|Ga0255096_1023357	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300027387\|Ga0208311_1024392	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300027598\|Ga0255121_1034573	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300027631\|Ga0208133_1031987	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300027659\|Ga0208975_1192321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	549	Open in IMG/M
3300027689\|Ga0209551_1018605	All Organisms → cellular organisms → Bacteria → Proteobacteria	2363	Open in IMG/M
3300027689\|Ga0209551_1224442	Not Available	569	Open in IMG/M
3300027708\|Ga0209188_1046175	Not Available	1963	Open in IMG/M
3300027732\|Ga0209442_1056773	All Organisms → cellular organisms → Bacteria → Proteobacteria	1671	Open in IMG/M
3300027754\|Ga0209596_1245579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	738	Open in IMG/M
3300027759\|Ga0209296_1103954	Not Available	1351	Open in IMG/M
3300027760\|Ga0209598_10031236	Not Available	2942	Open in IMG/M
3300027763\|Ga0209088_10329782	Not Available	610	Open in IMG/M
3300027782\|Ga0209500_10218575	Not Available	850	Open in IMG/M
3300027804\|Ga0209358_10274658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. MMS-10A-178	838	Open in IMG/M
3300027805\|Ga0209229_10224528	Not Available	838	Open in IMG/M
3300031784\|Ga0315899_11004282	Not Available	741	Open in IMG/M
3300031784\|Ga0315899_11138819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	681	Open in IMG/M
3300032050\|Ga0315906_11163087	All Organisms → cellular organisms → Bacteria → Proteobacteria	563	Open in IMG/M
3300032092\|Ga0315905_10040501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4732	Open in IMG/M
3300034022\|Ga0335005_0104239	Not Available	1844	Open in IMG/M
3300034050\|Ga0335023_0094754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. MMS-10A-178	1724	Open in IMG/M
3300034050\|Ga0335023_0104632	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300034050\|Ga0335023_0131221	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300034068\|Ga0334990_0211960	Not Available	1058	Open in IMG/M
3300034107\|Ga0335037_0660581	Not Available	548	Open in IMG/M
3300034166\|Ga0335016_0564777	All Organisms → cellular organisms → Bacteria → Proteobacteria	628	Open in IMG/M
3300034167\|Ga0335017_0587894	All Organisms → cellular organisms → Bacteria → Proteobacteria	578	Open in IMG/M
3300034283\|Ga0335007_0469607	All Organisms → cellular organisms → Bacteria → Proteobacteria	764	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	69.81%
Marine	Environmental → Aquatic → Marine	30.19%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	40.57%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	24.53%
Lentic	Environmental → Aquatic → Freshwater → Lentic	17.92%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	5.66%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.77%
Lotic	Environmental → Aquatic → Freshwater → Lotic	2.83%
River	Environmental → Aquatic → Freshwater → River	2.83%
Coastal	Environmental → Aquatic → Marine → Coastal	0.94%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	40.57%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	24.53%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	14.15%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	5.66%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.77%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.83%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	2.83%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.94%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	24.53%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	19.81%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	11.32%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	10.38%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	5.66%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	4.72%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.77%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.83%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	2.83%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.83%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.89%
Lotic	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Lotic	1.89%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.94%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.94%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.94%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.94%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.94%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.94%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.94%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000268	Lotic microbial communities from Mississippi River at two locations in the state of Minnesota, sample from River Site 1, Mississippi Headwaters ver2	Environmental	Open in IMG/M
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300000929	Marine plume microbial communities from the Columbia River - 15 PSU	Environmental	Open in IMG/M
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300004054	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (v2)	Environmental	Open in IMG/M
3300004123	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SD (version 2)	Environmental	Open in IMG/M
3300004767	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004769	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004773	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA1M	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007545	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3	Environmental	Open in IMG/M
3300007547	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02	Environmental	Open in IMG/M
3300007548	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3	Environmental	Open in IMG/M
3300007560	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007593	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-3	Environmental	Open in IMG/M
3300007600	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3	Environmental	Open in IMG/M
3300007603	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02	Environmental	Open in IMG/M
3300007620	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02	Environmental	Open in IMG/M
3300007621	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-3	Environmental	Open in IMG/M
3300007625	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-02	Environmental	Open in IMG/M
3300007634	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02	Environmental	Open in IMG/M
3300007639	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02	Environmental	Open in IMG/M
3300007642	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3	Environmental	Open in IMG/M
3300007706	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-3	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008961	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009187	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012348	Freshwater microbial communities from Coldwater Creek, Ontario, Canada - S44	Environmental	Open in IMG/M
3300012772	Freshwater microbial communities from Lake Simoncouche, Canada - S_130826_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012773	Freshwater microbial communities from Lake Simoncouche, Canada - S_140212_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300018815	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_68	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020229	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-12m	Environmental	Open in IMG/M
3300020508	Freshwater microbial communities from Lake Mendota, WI - 15JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020565	Freshwater microbial communities from Lake Mendota, WI - 29APR2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300021072	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-15m	Environmental	Open in IMG/M
3300021079	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-9m	Environmental	Open in IMG/M
3300021600	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L626-11m	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300027156	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepA_8h	Environmental	Open in IMG/M
3300027193	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes)	Environmental	Open in IMG/M
3300027220	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02 (SPAdes)	Environmental	Open in IMG/M
3300027222	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-02 (SPAdes)	Environmental	Open in IMG/M
3300027244	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02 (SPAdes)	Environmental	Open in IMG/M
3300027302	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepA_8d	Environmental	Open in IMG/M
3300027387	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02 (SPAdes)	Environmental	Open in IMG/M
3300027598	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepB_8h	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027689	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034068	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031	Environmental	Open in IMG/M
3300034107	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133	Environmental	Open in IMG/M
3300034166	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Sep2012-rr0079	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
M3P_101701411	3300000268	Lotic	NKKAHLVSGLCGVAVGVAVRSQSPPQSVIRLMIRRGLTCQNGAIESVCVELVCEHF*
M3P_102216152	3300000268	Lotic	LDNKKAHLVSGLCGVAVGIAVSSQSPPQSFIDRMIGRGITCQNGAIECVCVEQVCEHL*
JGI12421J11937_100759872	3300000756	Freshwater And Sediment	LDNKKAHLVSGLCGVAVGVAVRSQSPPQSVIRLMIGRGLTCQNGAIGSVCVELVCEHL*
NpDRAFT_101431573	3300000929	Freshwater And Marine	LDNKKAHLVSGLCGVAVGVAVRSQSPPQSVIRLMIGRGFTCQNGAIESVCVELVCEHL*
B570J14230_100419502	3300001282	Freshwater	LDNKKAHLVSGLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQNGTIESVCVELVCEHL*
B570J29032_1091975923	3300002408	Freshwater	SIILLEVLDNKKAHLVSGLCGVAVGVAVSSHSPPQSVIHRMIGRGLTCQNGAIESVCVELVCEHL*
JGI25910J50241_101444482	3300003388	Freshwater Lake	LDNKKAHLVSGLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQNGAIESVCVELVCEHL*
JGI25911J50253_100639082	3300003411	Freshwater Lake	LDNKKAHLVSGLCGVAVGVAVRSQSPPQSIIHRMIGRGLTCQNGAIESVCIEQVCEHLSKFD*
Ga0063232_101779692	3300004054	Freshwater Lake	GLCGVAVGIAVSSQSPPQSVIHQMIGRGLTCQYGAIESVCVEEVSKHL*
Ga0066181_100949291	3300004123	Freshwater Lake	LDNKKAHLVSGLCGVAVGVAVRSQSPPQSVIRLMIGRGLTCQNGAIESVCVELVCEHL*
Ga0007750_15291062	3300004767	Freshwater Lake	LDNKKAHLVSGLCGVAVGVAVRSQSPPQSVIRLMIGRGLTCQNGAIES
Ga0007748_114590962	3300004769	Freshwater Lake	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRGLTCQNGAIES
Ga0007795_102186362	3300004773	Freshwater	LGNKKARLVSGLCGMALRIAVNSQSPPQSVIHQLIGRGFTRQNGAV*
Ga0070374_101166912	3300005517	Freshwater Lake	LDNKKTHLISGLCGVAVGIAVSSQSPPQSVIHQMIGRGLTCQYGAIESVCVEEVSKHL*
Ga0070743_102468762	3300005941	Estuarine	LDNKKAHLVSGLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQNGAIECVCVEQVCEHLDNFND*
Ga0070744_100312043	3300006484	Estuarine	LDNKKAHLVSGLCGVAVGVAVSSHSPPQSVIHRMIGRGLTCQNGAIESVCVELVCEHL*
Ga0075464_101043522	3300006805	Aqueous	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIRLMIGRGFTCQNGAIESECVELVCEHL*
Ga0102873_10454921	3300007545	Estuarine	NTKAHLVSGLCGVAVGIAVSSQSPPQSVIRLMNGRGLTCQNGTNESVCVD*
Ga0102875_11573952	3300007547	Estuarine	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRGLTRQNGAIESVCVELVCEHL*
Ga0102877_11603962	3300007548	Estuarine	LDNKKAHLVSGLCGVAVGFAVNSQSPPQSVIDRMIGRGFTCQYGAIESECVELDCEHL*
Ga0102913_11022282	3300007560	Estuarine	LDNKKAHLVSGLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQNGAIECVCVEQ
Ga0102917_12192821	3300007590	Estuarine	VLDNKKAHLVSGLCGVAVGIAVSSQSPPQSVIHRMIGRGITCQNGAIECVCVEQVCEHL*
Ga0102918_10781053	3300007593	Estuarine	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRGITCQNGAIEC
Ga0102920_12789421	3300007600	Estuarine	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIRLMIGRGLTCQNGAIESVCVELVCEHL*
Ga0102921_12989462	3300007603	Estuarine	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRDLTCQNGAIESGCVELDCEHL*
Ga0102871_10227351	3300007620	Estuarine	AHLVSGLCGVAVVVAVRSQSPPQSVIRLMIGRSLTCQNGAIESVCVELVCEHLDNFND*
Ga0102872_11005282	3300007621	Estuarine	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIHQMIGRGLTCQYGAIESVCVEQVCEHL*
Ga0102870_11182151	3300007625	Estuarine	LDNKKAHLVSGLCGVAVGVAVRSQSPPQSVIRLMIGRSLTCQNGAIESVCVELVCEHLDN
Ga0102901_10613871	3300007634	Estuarine	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRGITCQNGAIESVCVELVCEHL*
Ga0102865_10219791	3300007639	Estuarine	LDNKKAHLVSGLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQN
Ga0102876_11354082	3300007642	Estuarine	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSFIDRMIGRGITCQNGAIESVCVELVCEHL*
Ga0102876_11869331	3300007642	Estuarine	LDNKKAHLVSGLCGVAVGVAVRSQSPPQSVIVRMIGRGLTCQNGAIESECVEL
Ga0102899_11380892	3300007706	Estuarine	LDNKKAHLVSGLCGVAVGIAVNSQRPPQSVIRLMIGRGLTCQNGANENVCVE*
Ga0102859_10323321	3300007708	Estuarine	KAHLVSGLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQNGAIESVCVELVCEHL*
Ga0114841_10466054	3300008259	Freshwater, Plankton	LDNKKAHLVSGLCGVAVGVAVRSQSPPQSVIRLMIGRGLICQNGAIESVCVELVCE
Ga0102887_11335371	3300008961	Estuarine	LDNKKAHLVSGLCGVAVGVAVRSQSPPQSVIDRMIGRGITCQNGAIECVCVE
Ga0102831_11369942	3300008996	Estuarine	SGLCGVAVGVAVSSHSPPQSVIHRMIGRGLTCQNGAIESVCVELVCEHL*
Ga0114973_100642521	3300009068	Freshwater Lake	MDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRG
Ga0114973_105173081	3300009068	Freshwater Lake	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRGLTCQNGAIESECVELDCKHL*
Ga0102812_107571022	3300009086	Estuarine	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRGFTCQNGAIESVCVELVCEHL*
Ga0114962_101423553	3300009151	Freshwater Lake	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRGFTCQYGAIESECVELDCEHL*
Ga0114980_100694364	3300009152	Freshwater Lake	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRGFTCQNGAIESECVELDCEHL*
Ga0114977_101403141	3300009158	Freshwater Lake	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIRLMIGRDLTRQNGAIESECVELDCEHL*
Ga0114975_105568841	3300009164	Freshwater Lake	ARLVSGLCGMALVIAVNSQSPPQSVIHQLIGRGFTRQNGAV*
Ga0114979_103032172	3300009180	Freshwater Lake	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIRLMIGRGFTCQNGAIESECVELDCEHL*
Ga0114979_106274142	3300009180	Freshwater Lake	LDNKKAHLVSGLCGVAVGVAVRSQSPPQSVIRLMIGRGLTCQNGAIESVCVEQVCEH
Ga0114959_102359433	3300009182	Freshwater Lake	DNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRGFTCQYGAIESECVELDCEHL*
Ga0114959_105947451	3300009182	Freshwater Lake	DNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRGFTCQNGAIESECVELDCKHL*
Ga0114972_101891483	3300009187	Freshwater Lake	MDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRGLTCQNGAIESECVELDCKHL*
Ga0114958_100823972	3300009684	Freshwater Lake	MDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRGFTCQYGAIESECVELDCEHL*
Ga0133913_117277352	3300010885	Freshwater Lake	LDNKKARLVSGLCGVALSIAVNSQSPPQSVIHQLIGRGFTRQNGAV*
Ga0157140_100321601	3300012348	Freshwater	LDNKKAHLVSGLCGVAVGVAVRSQSPPQSVIRLMIGRGLTYQNGAIERVCIELDC
Ga0138287_10014552	3300012772	Freshwater Lake	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIRLMIGRGFTCQNGAIESE
Ga0138290_12068381	3300012773	Freshwater Lake	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIRLMIGRGLTCQNGANENVCVE*
Ga0164294_103566552	3300013006	Freshwater	LDNKKAHLVSGLCGVAVGIAVNSQSTPQSVIRLMNGRGLTCQNGTNESVCVD*
Ga0187845_10527473	3300018815	Freshwater	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIRLMNGRGLTCQNGTNESVCVD
Ga0187845_12713541	3300018815	Freshwater	LDNKKAHLVSGLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQNGAIESVCIELVCEHF
Ga0211732_13744732	3300020141	Freshwater	LDNKKAHLVSGLCGVAVGVAVRSQSPPQSVIRLMIGRGLTCQNGAIESVCVELVCEHLENFE
Ga0211733_100463951	3300020160	Freshwater	LDNKKAHLVSGLCGVAVGVAVRSQSPPQSVSSLMIGRGLTCQNGAIESVCVELVCEHLENFE
Ga0194042_11664951	3300020229	Anoxic Zone Freshwater	LDNKKAHWVSGLCGVAVGVAVRSQRPPQSVIYWMIGRDQTYQNGAIECVYVEVGCEHDNNFK
Ga0208225_10190231	3300020508	Freshwater	LDNKKAHLVSGLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQNGTIESVCVELVCEHL
Ga0208718_10225193	3300020565	Freshwater	LDNKKAHLVSGLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQNGAIESVCVELVCEHL
Ga0194057_101889381	3300021072	Anoxic Zone Freshwater	LDNKKAHWVSGLCGVAVGVAVRSQRPPQSVIYWMIGRDQTYQNGAIECVYVEVGCEHDNN
Ga0194055_101770872	3300021079	Anoxic Zone Freshwater	LDNKKAHLVSGLCGVAVGVAVSSHSPPQSVIDRMIGRGFTCQNGAIESECVELDCEHL
Ga0194059_12551002	3300021600	Anoxic Zone Freshwater	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRGFTCQNGAIESECVELDCE
Ga0194060_100869792	3300021602	Anoxic Zone Freshwater	LVRGLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQNGAIESVCVELVCEHL
Ga0222712_101230405	3300021963	Estuarine Water	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRGFTCQNGAIESECVELDCEHL
Ga0214919_102860162	3300023184	Freshwater	LDNKKAHLVSGLCGVAVDIAVNSQSPPQSVIRLMIGRGLTCQNGANESVCVELDCEHL
Ga0214919_104249742	3300023184	Freshwater	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIRLMIGRGFTCQNGAIESECVELDCEHL
Ga0244777_108036452	3300024343	Estuarine	SGLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQNGAIECVCVEQVCEHL
Ga0255078_10914952	3300027156	Freshwater	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIRLMIGRGLTCQNGAI
Ga0208800_10101911	3300027193	Estuarine	LDNKKAHLVSGLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQNGAIECVCVEQVCEHLDNFND
Ga0208927_10248683	3300027220	Estuarine	LDNKKAHLVSGLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQNGTIESV
Ga0208024_10324701	3300027222	Estuarine	LDNKKAHLVSGLCGVAVGVAVRSQSPPQSVIRLMIGRSLTCQNGAIESVCVELVCEHLD
Ga0208173_10150503	3300027244	Estuarine	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIRLMIGRGLTCQNGANENVCVE
Ga0255096_10233573	3300027302	Freshwater	LDNKKAHLVSGLCGVAVGVAVSSQSPPQSVIHRMIGRGITCQNGAIECVCVEQ
Ga0208311_10243921	3300027387	Estuarine	LDNKKAHLVSGLCGVAVGVAVRSQSPPQSVIRLMIGRGLTCQNGAIESVCVEQV
Ga0255121_10345732	3300027598	Freshwater	KAHLVSGLCGVAVGVAVRSQSPPQSVIRLMIGRGLTCQNGAIESVCVELICEHL
Ga0208133_10319871	3300027631	Estuarine	LDNKKAHLVSGLCGVAVGVAVRSQSPPQSVIRLMIGRGLTCQNGAIESVCVELVCEHLENFELLD
Ga0208975_11923212	3300027659	Freshwater Lentic	HLVSGLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQNGAIESVCVELVCEHL
Ga0209551_10186052	3300027689	Freshwater Lake	LDNKKTHLISGLCGVAVGIAVSSQSPPQSVIHQMIGRGLTCQYGAIESVCVEEVSKHL
Ga0209551_12244422	3300027689	Freshwater Lake	LDNKKAHLVSGLCGVAVGVAVRSQSPPQSIIHRMIGRGLTCQNGAIESVCIE
Ga0209188_10461753	3300027708	Freshwater Lake	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRGFTCQYGAIESECVELDCEHL
Ga0209442_10567731	3300027732	Freshwater Lake	LDNKKAHLVSGLCGVAVGVAVRSQSPPQSVIRLMIGRGLTCQNGAIESVCVELVCEHL
Ga0209596_12455792	3300027754	Freshwater Lake	VLDNKKAHLVSGLCGVAVGVAVRSQSPPQSVIRLMIGRGLTCQNGANENVCVE
Ga0209296_11039543	3300027759	Freshwater Lake	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIRLMIGRGFTCQNGAIESECVELVCEHL
Ga0209598_100312365	3300027760	Freshwater Lake	MDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRGLTCQNGAIESECVELDCKHL
Ga0209088_103297821	3300027763	Freshwater Lake	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIRLMIGRGFTCQNGAIESECVKLDCE
Ga0209500_102185751	3300027782	Freshwater Lake	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIRLMIGRGFTCQNGAIESECVELDCKHF
Ga0209358_102746582	3300027804	Freshwater Lake	AHLVSGLCGVAVGVAVRSQSPPQSVIRLMIGRGLTCQNGAIGSVCVELVCEHL
Ga0209229_102245281	3300027805	Freshwater And Sediment	LDNKKAHLISGLCGVAVGVAVSSQSPPQAVIRLMIRRGFTCQNGAIESVCVELVCEHL
Ga0315899_110042822	3300031784	Freshwater	LDNKKAHLVSGLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQNGAIESVCVELV
Ga0315899_111388192	3300031784	Freshwater	GLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQNGAIESVYVELVCEHL
Ga0315908_107180311	3300031786	Freshwater	GLCGVAVGVAVRSQSPPQSVIRLMIGRGLTCQNGAIESVCVEQVCEHS
Ga0315906_110923291	3300032050	Freshwater	LCGVAVGVAVRSQSPPQSVIRLMIGRGLTCQNGAIESVCVEQVCEHLLKFD
Ga0315906_111630872	3300032050	Freshwater	HLISGLCGVAVGVAVSSQSPPQSFIDRMIGRGITCQNGAIECVCVEQVCEHL
Ga0315905_100405019	3300032092	Freshwater	GLCGVAVGVAVRSQSPPQSVIRLMIGRGLTCQNGAIESVCVELVCEHL
Ga0335005_0104239_1153_1329	3300034022	Freshwater	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRGITCQNGAIESVCVELVCEHL
Ga0335023_0094754_1526_1684	3300034050	Freshwater	LDNKKAHLVSGLCGVAVDIAVNSQSPPQSVIRLMIGRGLTCQNGTNESVCVE
Ga0335023_0104632_2_163	3300034050	Freshwater	AHLVSGLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQNGAIESVCVELVCEHL
Ga0335023_0131221_1246_1404	3300034050	Freshwater	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIDRMIGRGFTCQNGAIGSVCIE
Ga0334990_0211960_46_222	3300034068	Freshwater	LDNKKAHLVSGLCGVAVGIAVNSQSPPQSVIRLMIGRGLTCQNGAIESVCVELVCEHL
Ga0335037_0660581_396_548	3300034107	Freshwater	VSGLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQNGAIECVCVEQVCEHL
Ga0335016_0564777_1_180	3300034166	Freshwater	VLDNKKAHLVSGLCGVAVGVAVSSHSPPQSVIHRMIGRGLTCQNGAIESVCVELVCEHL
Ga0335017_0587894_413_577	3300034167	Freshwater	KAHLVSGLCGVAVGVAVSSHSPLQSVIHRMIGRGLTCQNGAIESVCVELVCEHL
Ga0335007_0469607_1_171	3300034283	Freshwater	NKKAHLVSGLCGVAVGIAVSSQSPPQSVIDRMIGRGITCQNGTIESVCVELVCEHL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093865

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences