Metagenome Family F093834

Overview

Basic Information

• Family ID: F093834
• Family Type: Metagenome
• Number of Sequences: 106
• Average Sequence Length: 57 residues
• Representative Sequence: MEFIIYMALVVLTTFVIIAINEVAKEVRGMRSVFETHYQLERVPVKSENAYKRKGVEL
• Number of Associated Samples: 76
• Number of Associated Scaffolds: 106

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 83.02 %
• % of genes near scaffold ends (potentially truncated): 18.87 %
• % of genes from short scaffolds (< 2000 bps): 82.08 %
• Associated GOLD sequencing projects: 64
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (40.566 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (54.717 % of family members)
• Environment Ontology (ENVO): Unclassified (77.358 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (91.509 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: Yes
• Secondary Structure distribution:
  α-helix: 41.86%
  β-sheet: 0.00%
  Coil/Unstructured: 58.14%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF13365	Trypsin_2	2.83
PF13203	DUF2201_N	1.89
PF11715	Nup160	0.94
PF00293	NUDIX	0.94

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.43 %
Unclassified	root	N/A	40.57 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.57 %
Viruses	superkingdom	All Organisms → Viruses	39.62 %
cellular organisms	root	All Organisms → cellular organisms	19.81 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	39.62 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	19.81 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002231|KVRMV2_100524303	All Organisms → Viruses → Predicted Viral	1609
3300002231|KVRMV2_101423316	Not Available	848
3300002488|JGI25128J35275_1000698	All Organisms → cellular organisms → Bacteria	10364
3300002514|JGI25133J35611_10060824	All Organisms → Viruses → Predicted Viral	1226
3300002519|JGI25130J35507_1004956	All Organisms → cellular organisms → Bacteria	3675
3300005427|Ga0066851_10117718	Not Available	856
3300005508|Ga0066868_10252057	Not Available	537
3300005603|Ga0066853_10094084	All Organisms → Viruses → Predicted Viral	1021
3300006565|Ga0100228_1054420	All Organisms → Viruses → Predicted Viral	1649
3300006565|Ga0100228_1143439	Not Available	979
3300006735|Ga0098038_1044045	All Organisms → Viruses → Predicted Viral	1627
3300006735|Ga0098038_1137165	Not Available	822
3300006738|Ga0098035_1183771	Not Available	702
3300006750|Ga0098058_1023906	All Organisms → Viruses → Predicted Viral	1785
3300006751|Ga0098040_1016119	All Organisms → Viruses → Predicted Viral	2485
3300006751|Ga0098040_1107766	Not Available	836
3300006752|Ga0098048_1221637	Not Available	556
3300006753|Ga0098039_1191334	Not Available	694
3300006753|Ga0098039_1240557	Not Available	609
3300006789|Ga0098054_1195535	Not Available	738
3300006921|Ga0098060_1062401	All Organisms → Viruses → Predicted Viral	1086
3300006926|Ga0098057_1003352	All Organisms → cellular organisms → Bacteria	4523
3300006927|Ga0098034_1049515	All Organisms → Viruses → Predicted Viral	1241
3300007963|Ga0110931_1054026	All Organisms → Viruses → Predicted Viral	1213
3300008050|Ga0098052_1370987	Not Available	534
3300009103|Ga0117901_1013002	All Organisms → cellular organisms → Bacteria	7086
3300009103|Ga0117901_1149617	All Organisms → Viruses → Predicted Viral	1305
3300009129|Ga0118728_1193982	Not Available	848
3300009481|Ga0114932_10095420	All Organisms → Viruses → Predicted Viral	1856
3300009593|Ga0115011_11061995	Not Available	689
3300009593|Ga0115011_11905739	Not Available	539
3300009605|Ga0114906_1255867	Not Available	569
3300009790|Ga0115012_10071099	All Organisms → Viruses → Predicted Viral	2378
3300009790|Ga0115012_10463877	All Organisms → cellular organisms → Bacteria	983
3300009790|Ga0115012_10639430	All Organisms → cellular organisms → Bacteria	847
3300009790|Ga0115012_10922679	Not Available	716
3300009790|Ga0115012_11974918	Not Available	516
3300010150|Ga0098056_1100753	Not Available	986
3300010153|Ga0098059_1042073	All Organisms → Viruses → Predicted Viral	1845
3300010153|Ga0098059_1187709	Not Available	807
3300011013|Ga0114934_10553501	Not Available	507
3300012950|Ga0163108_10824670	Not Available	599
3300012952|Ga0163180_10002449	All Organisms → cellular organisms → Bacteria	10376
3300012952|Ga0163180_10235993	All Organisms → Viruses → Predicted Viral	1268
3300012952|Ga0163180_10237067	All Organisms → Viruses → Predicted Viral	1266
3300012953|Ga0163179_10249884	All Organisms → cellular organisms → Bacteria	1382
3300012953|Ga0163179_10334906	All Organisms → Viruses → Predicted Viral	1208
3300012953|Ga0163179_10479055	All Organisms → Viruses → Predicted Viral	1025
3300012953|Ga0163179_10798372	Not Available	809
3300017702|Ga0181374_1002661	All Organisms → Viruses → Predicted Viral	3437
3300017703|Ga0181367_1012585	All Organisms → Viruses → Predicted Viral	1553
3300017704|Ga0181371_1020830	All Organisms → Viruses → Predicted Viral	1093
3300017705|Ga0181372_1006870	All Organisms → Viruses → Predicted Viral	2143
3300017705|Ga0181372_1040804	Not Available	784
3300017709|Ga0181387_1067534	Not Available	719
3300017720|Ga0181383_1036256	All Organisms → Viruses → Predicted Viral	1327
3300017720|Ga0181383_1124985	All Organisms → cellular organisms → Bacteria	690
3300017742|Ga0181399_1005965	All Organisms → cellular organisms → Bacteria	3746
3300017751|Ga0187219_1080220	All Organisms → Viruses → Predicted Viral	1020
3300017759|Ga0181414_1088049	Not Available	819
3300017764|Ga0181385_1142050	Not Available	730
3300017775|Ga0181432_1053304	All Organisms → Viruses → Predicted Viral	1136
3300017775|Ga0181432_1156252	All Organisms → cellular organisms → Bacteria	703
3300017776|Ga0181394_1059455	All Organisms → Viruses → Predicted Viral	1270
3300017779|Ga0181395_1127026	Not Available	810
3300020165|Ga0206125_10063458	All Organisms → Viruses → Predicted Viral	1712
3300020403|Ga0211532_10259985	All Organisms → cellular organisms → Bacteria	676
3300020403|Ga0211532_10365636	All Organisms → cellular organisms → Bacteria	546
3300020409|Ga0211472_10147238	All Organisms → cellular organisms → Bacteria	939
3300020411|Ga0211587_10334626	All Organisms → cellular organisms → Bacteria	619
3300020448|Ga0211638_10085005	All Organisms → Viruses → Predicted Viral	1401
3300020456|Ga0211551_10054844	All Organisms → Viruses → Predicted Viral	1859
3300020464|Ga0211694_10036441	All Organisms → Viruses → Predicted Viral	1896
3300020470|Ga0211543_10115459	All Organisms → Viruses → Predicted Viral	1364
3300020470|Ga0211543_10183760	All Organisms → Viruses → Predicted Viral	1040
3300020471|Ga0211614_10521034	All Organisms → cellular organisms → Bacteria	527
3300020472|Ga0211579_10019853	All Organisms → Viruses → Predicted Viral	4390
(restricted) 3300022888|Ga0233428_1012072	All Organisms → Viruses → Predicted Viral	4834
3300025066|Ga0208012_1057546	Not Available	559
3300025072|Ga0208920_1085748	Not Available	591
3300025078|Ga0208668_1019481	All Organisms → Viruses → Predicted Viral	1385
3300025082|Ga0208156_1056994	Not Available	771
3300025096|Ga0208011_1005437	All Organisms → Viruses → Predicted Viral	3824
3300025097|Ga0208010_1048566	Not Available	949
3300025099|Ga0208669_1116824	Not Available	543
3300025103|Ga0208013_1058757	All Organisms → Viruses → Predicted Viral	1027
3300025109|Ga0208553_1006342	All Organisms → cellular organisms → Bacteria	3479
3300025109|Ga0208553_1104683	Not Available	653
3300025112|Ga0209349_1061155	All Organisms → Viruses → Predicted Viral	1148
3300025112|Ga0209349_1134350	Not Available	678
3300025127|Ga0209348_1025042	All Organisms → Viruses → Predicted Viral	2189
3300025127|Ga0209348_1140680	Not Available	716
3300025128|Ga0208919_1076217	All Organisms → Viruses → Predicted Viral	1106
3300025128|Ga0208919_1097370	Not Available	949
3300025132|Ga0209232_1002824	All Organisms → cellular organisms → Bacteria	8468
3300025132|Ga0209232_1009571	All Organisms → cellular organisms → Bacteria	4044
3300025133|Ga0208299_1176682	Not Available	650
3300025141|Ga0209756_1059191	All Organisms → Viruses → Predicted Viral	1822
3300025141|Ga0209756_1254658	Not Available	642
3300027906|Ga0209404_10320729	Not Available	993
3300028022|Ga0256382_1028836	All Organisms → Viruses → Predicted Viral	1225
3300028022|Ga0256382_1053502	All Organisms → cellular organisms → Bacteria	943
3300028022|Ga0256382_1092327	Not Available	724
3300029319|Ga0183748_1000083	Not Available	56475
3300031774|Ga0315331_10017397	All Organisms → cellular organisms → Bacteria	5304
3300032820|Ga0310342_103597115	Not Available	511

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Type

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	66.04%
Unclassified	Environmental → Aquatic → Marine → Unclassified	11.32%
Strait	Environmental → Aquatic → Marine → Strait	10.38%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.77%
Coastal	Environmental → Aquatic → Marine → Coastal	2.83%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.89%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.89%
Inlet	Environmental → Aquatic → Marine → Inlet	0.94%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.94%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	63.21%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	11.32%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	10.38%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.77%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.83%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.83%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	1.89%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.94%

Habitat

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	54.72%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	11.32%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	10.38%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	6.60%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	3.77%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	2.83%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.89%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	1.89%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	1.89%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.94%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.94%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.94%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.94%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.94%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental
3300002488	Marine viral communities from the Pacific Ocean - ETNP_2_60	Environmental
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental
3300002519	Marine viral communities from the Pacific Ocean - ETNP_2_300	Environmental
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental
3300005508	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259	Environmental
3300005603	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61	Environmental
3300006565	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125m	Environmental
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental
3300009103	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 250-2.7um	Environmental
3300009129	Combined Assembly of Gp0139513, Gp0139514	Environmental
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental
3300017702	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_10 viral metaG	Environmental
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental
3300017704	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaG	Environmental
3300017705	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaG	Environmental
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental
3300017742	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21	Environmental
3300017751	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)	Environmental
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental
3300020409	Marine microbial communities from Tara Oceans - TARA_A100001403 (ERX555912-ERR599106)	Environmental
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental
3300020448	Marine microbial communities from Tara Oceans - TARA_B100000941 (ERX555919-ERR598954)	Environmental
3300020456	Marine microbial communities from Tara Oceans - TARA_B100001741 (ERX555984-ERR599123)	Environmental
3300020464	Marine microbial communities from Tara Oceans - TARA_B100000530 (ERX556075-ERR599101)	Environmental
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental
3300020472	Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)	Environmental
3300022888 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_120_MG	Environmental
3300025066	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)	Environmental
3300025072	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)	Environmental
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental
3300025082	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)	Environmental
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental
3300025097	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)	Environmental
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
KVRMV2_1005243032	3300002231	Marine Sediment	MEFVIYASLVVMTTFIIIAINEVAKEVRGMRSVFETQYQLERVPVESENRYKRKGVEL*
KVRMV2_1014233163	3300002231	Marine Sediment	ASLVVMTTFIIIAINEVAKEVRGMRSVFEAQYQLERVPVESENRYKRKGVEL*
JGI25128J35275_100069815	3300002488	Marine	MEFVIYGTLVILTTFVIVAINEVAKEVKSMRDVFESHYQLERVPVRENVYKRKGVEL*
JGI25133J35611_100608241	3300002514	Marine	MEFIVYMALVVLTTFVIIAINEVAKEVRGMRSVFETHYQLERVPIKSEDT
JGI25130J35507_10049562	3300002519	Marine	MEFLIFTAAFVGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRIQENQYKRKGGVEL*
Ga0066851_101177183	3300005427	Marine	MEFLIFTAAFIGVSFTIIAIHEIATEVRGIRGVFESHYQLERVRVQENQYKRK
Ga0066868_102520571	3300005508	Marine	MEFLIFTAAFIGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRVQENQYKRK
Ga0066853_100940842	3300005603	Marine	MEFLIFTAAFVGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRVQENQYKRKGGVEL*
Ga0100228_10544202	3300006565	Marine	MEFIVFAGACFVSCFVIMAINEVAKEVRGMRSIFETHYQLERVRVQENPYKRKGVEL*
Ga0100228_11434392	3300006565	Marine	MEFIVFAGACFVSCFVIMAINEVAKEVRGMRSIFETHYQLERVRVQENQYKRKGVEL*
Ga0098038_10440452	3300006735	Marine	MEFIIYATLVILTTFVVLAINEIAKEVKNVREVFESHYQLERVPVSENRYKRNGVEL*
Ga0098038_11371653	3300006735	Marine	MEFIVFVATVFAVIFVIVAINEVAKEVRSLRSVFETQYQLERVPVKSENPYKRKGVEL*
Ga0098035_11837712	3300006738	Marine	MEFLIFTAAFIGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRVQENQYKRKGVEL*
Ga0098058_10239063	3300006750	Marine	VEFLIFTAAFVGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRIQENQYKRKGVEL*
Ga0098040_10161194	3300006751	Marine	MEFVIYMALVVLTTFVIIAINEVAKEVRGMRSVFETHYQLERVPIKSESAYKRKGVEL*
Ga0098040_11077663	3300006751	Marine	MEFLIFTAAFIGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRVQENQYKRKGGVEL*
Ga0098048_12216372	3300006752	Marine	MEFIIYMALVVLTTFVIIAINEVAKEVRGMRSVFETHYQLERVPVRSENTYKRKGVEL*
Ga0098039_11913341	3300006753	Marine	LIFTAAFVGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRVQENQYKRKGGVEL*
Ga0098039_12405572	3300006753	Marine	MEFLIFTAAFIGVSFTIIAIHEIATEVRGLRSVLETHYQLERVPVQTESKYKRKGVEL*
Ga0098054_11955353	3300006789	Marine	IYMSLVIMTTFVIIAITEVAKEVRGMRSVFESHYQLERVPVKAENPYKRKGVEL*
Ga0098060_10624013	3300006921	Marine	MEIIIYMSLVIMTTFVIIAITEVAKEVRGMRSVFESHYQLERVPVKAENPYKRKGVEL*
Ga0098057_100335211	3300006926	Marine	MEFLIFTAAFVGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRVQENQYKRKGVEL*
Ga0098034_10495152	3300006927	Marine	MEFLIFTAAFVGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRIQENQYKRKGVEL*
Ga0110931_10540263	3300007963	Marine	MEFIIYMALVVLTTFVIIAINEVAKEVRGMRSVFETHYQLERVPVKSENAYKRKGVEL*
Ga0098052_13709872	3300008050	Marine	MEFLIFTAAFVGVSFTIIAIHEIATEVRGLRSVLETHYQLERVPVQTESKYKRKGVEL*
Ga0117901_10130021	3300009103	Marine	KEVNRMEFIILVAVTIGVMFTIIAINEIAKEVRGMRSVFETHYQLERVKVQENRYKRKGVEL*
Ga0117901_11496173	3300009103	Marine	MEFIIFAGACMVSCFVIVAINEVAKEVRGMRSVFETHYQLERVKVQENSYKRKGVEL*
Ga0118728_11939822	3300009129	Marine	MEFIILVAVTIGVMFTIIAINEIAKEVRGMRSVFETHYQLERVKVQENRYKRKGVEL*
Ga0114932_100954204	3300009481	Deep Subsurface	MEFIVYMALVVLTTFVIIAINEVAKEVRGVRSVFETHYQLERVRTQENQYKRKGVEL*
Ga0115011_110619952	3300009593	Marine	MEFVIYMALVVLTTFVIIAINEVAKEVRGMRSVFETHYQLERVPVESENRYKRKGVEL*
Ga0115011_119057392	3300009593	Marine	MEFIVYMALVVLTTFVIIAINEVAKEVRGMRSVFETHYQLERVPVESENRYKRKGVEL*
Ga0114906_12558671	3300009605	Deep Ocean	MEFIIFAGACLVSCFMIIAINEVAKEVRGMRSIFETHYQLERVKVQENRYKRKGVEL*
Ga0115012_100710993	3300009790	Marine	MEFIVYMALVVLTTFVIIAINEVAKEVRGMRSVFEAHYQLERVPVESENPYKRKGVEL*
Ga0115012_104638772	3300009790	Marine	MEFIVFVAAVFAVTFVIVAINEVSKEVRGLRSVFETHYQLERVPIDRENPYKRKGVEL*
Ga0115012_106394302	3300009790	Marine	MEFVIYMALVVLTTFIIIAINEVAKEVRGVRSLFEAHYQLERVPVESENPYKRKGVEL*
Ga0115012_109226793	3300009790	Marine	VNKVEFIVYMALVVLTTFIIIAINEVAKEVRGIRSVFETQYQLERVRVQENSYKRKGVEL
Ga0115012_119749182	3300009790	Marine	VEFIILVAVTIGVMFTIIAINEVAKEVRGIRSVFETQYQLERVPVRSENAYKRKGVEL*
Ga0098056_11007531	3300010150	Marine	FIGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRIQENQYKRKGVEL*
Ga0098059_10420732	3300010153	Marine	MEFLIFTAAFIGVSFTIIAIHEIATEVRGIRGVFESHYQLERVRIQENQYKRKGVEL*
Ga0098059_11877092	3300010153	Marine	MEFIILVSVTVGVMFTIIAINEVAKEVRGIRTVFEAQYQLERVPVRSENTYKRKGVEL*
Ga0114934_105535012	3300011013	Deep Subsurface	MEFIVYMALVVMATFIIIAINEVAKEVRGMRSIFETHYQLERVKVQENRYKRKGVEL*
Ga0163108_108246702	3300012950	Seawater	MEFIVFAGACFVSCFVIIAINEIAKEVRALRTVFEAQYQLERVKVQENRYKRKGVEL*
Ga0163180_1000244916	3300012952	Seawater	MEFFIFAGACLISCFVIIAINEVAKEVRGMRTIFETHYQLERVPVQENAYKRKGVEL*
Ga0163180_102359933	3300012952	Seawater	MEFLIFMAATVGVMFIIIAINEVAKEVRGMRSVFETHYQLERVPVHAEDRYKRKGVEL*
Ga0163180_102370673	3300012952	Seawater	MEFVVFAGACFVSCFVIMAINEVAKEVRGMRSIFETHYQLERVRIQENQYKRKGVEL*
Ga0163179_102498843	3300012953	Seawater	MEFIIYGTLVILTTFVIVAINEVAKEVKSMRDVFESHYQLERVPVRENRYKRKGVEL*
Ga0163179_103349063	3300012953	Seawater	MEFIIYMALVVLTTFVIIAINEVAKEVRGMRSVFETHYQLERVPIKSEDTYKRKGVEL*
Ga0163179_104790552	3300012953	Seawater	MEFIVFVATVFAVIFVIVAINEVSKEVRGLRSVFEAHYQLERVPVESENPYKRKGVEL*
Ga0163179_107983722	3300012953	Seawater	MEFIVYMALVVLTTFIIIAINEVAKEVRGMRSIFETHYQLERVPVKSENAYKRKGVEL*
Ga0181374_10026612	3300017702	Marine	MEFLIFTAAFIGVSFTIIAIHEIATEVRGIRGVFESHYQLERVRIQENQYKRKGVEL
Ga0181367_10125855	3300017703	Marine	MEFLIFTAAFIGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRVQENQYK
Ga0181371_10208303	3300017704	Marine	LNRMEFLIFTAAFIGVSFTIIAIHEIATEVRGIRGVFESHYQLERVRVQENQYKRKGGVE
Ga0181372_10068703	3300017705	Marine	MEFIILVSVTVGVMFTIIAINEVAKEVRGIRTVFEAQYQLERVPARSENTYKRKGVEL
Ga0181372_10408041	3300017705	Marine	MEFVIYMALVVLTTFVIIAINEVAKEVRGVRSVFETHYQLER
Ga0181387_10675342	3300017709	Seawater	MEFIIYMALVILATFIIIAINEVAKEVRGVRSVFESHYQLERIPVKSENPYKRKGVEL
Ga0181383_10362563	3300017720	Seawater	MEFIVYMALVVLTTFVIIAINEVAKEVRGMRSIFETHYQLERVRTQENQYKRKGVEL
Ga0181383_11249851	3300017720	Seawater	MEFIVYMALVLLTTFIIIAINEVAKEVRGIRSVFETQYQLERVKVQENRYKRKGVEL
Ga0181399_100596510	3300017742	Seawater	MEFIVYMALVVLTTFVIIAINEVAKEVRGMRSVFETHYQLERIPVKAESPYKRKGVEL
Ga0187219_10802201	3300017751	Seawater	MEFIVYMALVVLTTFVIIAINEVAKEVRGMRSVFETHYQLERIPVKAE
Ga0181414_10880491	3300017759	Seawater	MEFIIYMALVVLTTLVIIAINEVAKEVRGMRSVFETHYQLERVPVKSENAYKRKGVEL
Ga0181385_11420502	3300017764	Seawater	MEFIIYMALVVLTTFVIIAINEVAKEVRGVRSVFETHYQLERVRTQENQYKRKGVEL
Ga0181432_10533043	3300017775	Seawater	MEFLIFTAAFVGVSFTIIAIHEIATEVRGIRGVFESHYQLERVRIQENQYKRKGVEL
Ga0181432_11562522	3300017775	Seawater	MEFVIYMALIILITFVIIAINEVAKEVRGMRSIFEAHYQLERVRVKENQYKRKGVEL
Ga0181394_10594551	3300017776	Seawater	KHMEFIIYMALVILATFIIIAINEVAKEVRGVRSVFESHYQLERVPVKAENPYKRKGVEL
Ga0181395_11270263	3300017779	Seawater	MEFIVYMALVVLTTFVIIAINEVAKEVRGVRSVFESHYQLERIPVKSENPYKRKGVEL
Ga0206125_100634583	3300020165	Seawater	MEFIILVSVTVGVMFTIIAINEVAKEVRGIRTVFEAQYQLERVPVRSENTYKRKGVEL
Ga0211532_102599852	3300020403	Marine	MEFIIYGTLVILTTFVIVAINEVAKEVKSMRDVFESHYQLERVPVRENPYKRKGVEL
Ga0211532_103656362	3300020403	Marine	SKPKNSILEVNKMEFIIYGTLVVLTTFVIVAINEVAKEVKSMRDVFESHYQLERVPVRENVYKRKGVEL
Ga0211472_101472383	3300020409	Marine	MEFIIYGTLVVLATFVIVAINEIAKEVRNIKDVFESHYQLERVPVRENSYKRKGVEL
Ga0211587_103346261	3300020411	Marine	MEFIVYMALVVLTTFIIIAINEVAKEVRGLRSIFETHYQLERVPVERENPYKRKGVEL
Ga0211638_100850053	3300020448	Marine	MEFIIYGALVILTTFIVLAINEVAKEVKSMRDVFESHYQLERVPVRENPYKRKGVEL
Ga0211551_100548443	3300020456	Marine	MEFVIYGTLVILATFVIVAINEVAKEVKSMRDVFESHYQLERVPVRENVYKRKGVEL
Ga0211694_100364414	3300020464	Marine	MELIIFAGACMVSCFLIIAINEVAKEVRGMRSIFETHYQLERVRVQENEYKRKGVEL
Ga0211543_101154592	3300020470	Marine	MEFLIFMTAFVGVMFMIVAINEVAKEVRGVRSVFETHYQLERVPVKSEDTYKRKGVEL
Ga0211543_101837602	3300020470	Marine	MEFIVYMALVVMATFVIIAINEVAKEVRGMRSVFEEHYQLERVPVRENPYKRKGVEL
Ga0211614_105210342	3300020471	Marine	MEFIVYMALVVLTTFIIIAINEVAKEVRGMRSVFEEHYQLERVPVRENPYKRKGVEL
Ga0211579_100198532	3300020472	Marine	MEFIIYMALVVLTTFVIIAINEVAKEVRGVRSVFETHYQLERVPIKSEDTYKRKGVEL
(restricted) Ga0233428_10120723	3300022888	Seawater	MEIIIYMSLVIMTTFVIIAITEVAKEVRGMRSVFESHYQLERVPVKAENTYKRKGVEL
Ga0208012_10575462	3300025066	Marine	MEFLIFTAAFIGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRVQENQYKRKGVEL
Ga0208920_10857483	3300025072	Marine	MEFLIFTAAFVGVSFTIIAINEVAKEVRGIRGVFESHYQLER
Ga0208668_10194812	3300025078	Marine	MEFLIFTAAFVGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRVQENQYKRKGGVEL
Ga0208156_10569941	3300025082	Marine	MEFLIFTAAFVGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRIQENQYKRKGGVEL
Ga0208011_10054376	3300025096	Marine	MEFVIYMALVVLTTFVIIAINEVAKEVRGMRSVFETHYQLERVPIKSESAYKRKGVEL
Ga0208010_10485661	3300025097	Marine	IGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRVQENQYKRKGVEL
Ga0208669_11168242	3300025099	Marine	HMEIIIYMSLVIMTTFVIIAITEVAKEVRGMRSVFESHYQLERVPVKAENPYKRKGVEL
Ga0208013_10587572	3300025103	Marine	MEFLIFTAAFIGVSFTIIAIHEIATEVRGIRGVFESHYQLERVRVQENQYKRKGGVEL
Ga0208553_10063429	3300025109	Marine	IFTAAFVGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRVQENQYKRKGGVEL
Ga0208553_11046832	3300025109	Marine	MEFLIFTAAFVGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRIQENQYKRKGVEL
Ga0209349_10611554	3300025112	Marine	MEFLIFTAAFVGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRIQESQYKRKGGVEL
Ga0209349_11343501	3300025112	Marine	AFVGVSFTIIAINEVAKEVRGIRGVFESHYQLERVRVQENQYKRKGVEL
Ga0209348_10250422	3300025127	Marine	MEFIIYGTLVVLTTFVIVAINEIAKEVKNVREVFESHYQLERVPVSENRYKRNGVEL
Ga0209348_11406802	3300025127	Marine	IKMEFIIYGTLVILTTFVVLAINEIAKEVKNVREVFESHYRLERVPVNENRYKRNGVEL
Ga0208919_10762172	3300025128	Marine	MEFIIYMALVVLTTFVIIAINEVAKEVRGMRSVFETHYQLERVPVKSENAYKRKGVEL
Ga0208919_10973702	3300025128	Marine	MEIIIYMSLVIMTTFVIIAITEVAKEVRGMRSVFESHYQLERVPVKAENPYKRKGVEL
Ga0209232_10028242	3300025132	Marine	MEFIVFVATVFAVIFVIVAINEVAKEVRSLRSVFETQYQLERVPVKSENPYKRKGVEL
Ga0209232_100957110	3300025132	Marine	MEFIIYGTLVVLATFVIVAINEIAKEVRNIKDVFESHYQLERVPVRENAYKRKGVEL
Ga0208299_11766822	3300025133	Marine	MEFLIFTAAFIGVSFTIIAIHEIATEVRGLRSVLETHYQLERVPVQTESKYKRKGVEL
Ga0209756_10591912	3300025141	Marine	MEFIVYMALVVLTTFVIIAINEVAKEVRGMRSVFETHYQLERVPIKSEDTYKRKGVEL
Ga0209756_12546581	3300025141	Marine	MEFIVYMALVVLATFIIIAINEVAKEVRGMRSVFETQYQLERVPVESENRYKRKGVEL
Ga0209404_103207292	3300027906	Marine	MEFVIYMALVVLTTFVIIAINEVAKEVRGMRSVFETHYQLERVPIKSENAYKRKGVEL
Ga0256382_10288361	3300028022	Seawater	MEFIIYASLVVMTTFIIIAINEVAKEVRGMRSVFEAQYQLERVPVESENRYKRKGVEL
Ga0256382_10535023	3300028022	Seawater	MEFIVYMALVVLTTFVIIAINEVAKEVRGVRSVFETHYQLERVRTQENQYKRKGVEL
Ga0256382_10923271	3300028022	Seawater	MEFIIFAGACLVSCFMIIAINEVAKEVRGMRSIFETHYQLERVKVQENRYKRKGVEL
Ga0183748_100008378	3300029319	Marine	MEFIVFVATVFAVIFVIVAINEVAKEVRGLRSVFETQYQLERVPVESENPYKRKGVEL
Ga0315331_100173973	3300031774	Seawater	MEFIVGMALVVLTAFIIIAINEVAKEVRGMRSIFETHYQLERVRTQENQYKRKGVEL
Ga0310342_1035971152	3300032820	Seawater	MEFIIYGTLVILTTFVIVAINEVAKEVKSMRDVFESHYQLERVPVRENVYKRKGVEL