Metagenome / Metatranscriptome Family F093831

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093831
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	97 residues
Representative Sequence	MIRFSNVQGDVFVDDRRRDDRLMARDGLALDPGGDYLVATTQNSSADVEAYGRTIRLAPFSYARLNLIQVLEGRHNEFWWAPMTKAFLAKLWALAGGRI
Number of Associated Samples	96
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	16.19 %
% of genes near scaffold ends (potentially truncated)	40.57 %
% of genes from short scaffolds (< 2000 bps)	81.13 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.86

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.642 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (10.377 % of family members)
Environment Ontology (ENVO)	Unclassified (36.792 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.792 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.02% β-sheet: 34.65% Coil/Unstructured: 54.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.86
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.86
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.82.1.11: YlbA-like	d1sefa_	1sef	0.57327
b.82.1.11: YlbA-like	d1sfna_	1sfn	0.55368
b.82.1.13: KduI-like	d1xrua1	1xru	0.55033
b.82.1.5: Quercetin 2,3-dioxygenase-like	d1y3ta1	1y3t	0.54429
b.82.1.12: Pirin-like	d6n0ka_	6n0k	0.5413

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF08238	Sel1	18.87
PF13795	HupE_UreJ_2	6.60
PF12385	Peptidase_C70	1.89
PF07883	Cupin_2	0.94
PF00873	ACR_tran	0.94
PF04187	Cofac_haem_bdg	0.94
PF01471	PG_binding_1	0.94
PF00069	Pkinase	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.77
COG3016	Putative heme-binding protein PhuW	General function prediction only [R]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.64 %
Unclassified	root	N/A	27.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.64 %
Unclassified	root	N/A	27.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.64 %
Unclassified	root	N/A	27.36 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	67.92 %
Unclassified	root	N/A	27.36 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	54.72 %
Unclassified	root	N/A	27.36 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	4.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	50.00 %
Unclassified	root	N/A	27.36 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.94 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.94 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	50.00 %
Unclassified	root	N/A	27.36 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	4.72 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	0.94 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.94 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	50.00 %
Unclassified	root	N/A	27.36 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	4.72 %
unclassified Rhodocyclaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → unclassified Rhodocyclaceae	0.94 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.94 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	50.00 %
Unclassified	root	N/A	27.36 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	4.72 %
Rhodocyclaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → unclassified Rhodocyclaceae → Rhodocyclaceae bacterium	0.94 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.94 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	50.00 %
Unclassified	root	N/A	27.36 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	4.72 %
Rhodocyclaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → unclassified Rhodocyclaceae → Rhodocyclaceae bacterium	0.94 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.94 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0754550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	594	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100588494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1785	Open in IMG/M
3300000559\|F14TC_107396911	Not Available	656	Open in IMG/M
3300000891\|JGI10214J12806_10666768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1619	Open in IMG/M
3300001305\|C688J14111_10250579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	555	Open in IMG/M
3300001686\|C688J18823_10040147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3226	Open in IMG/M
3300001686\|C688J18823_10214554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1293	Open in IMG/M
3300004114\|Ga0062593_100459977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1163	Open in IMG/M
3300004156\|Ga0062589_101032285	Not Available	771	Open in IMG/M
3300004157\|Ga0062590_100654944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	936	Open in IMG/M
3300004643\|Ga0062591_101322134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	710	Open in IMG/M
3300005179\|Ga0066684_10701877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	677	Open in IMG/M
3300005294\|Ga0065705_10273450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1124	Open in IMG/M
3300005294\|Ga0065705_10710846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	648	Open in IMG/M
3300005354\|Ga0070675_100071889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2871	Open in IMG/M
3300005439\|Ga0070711_100828942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	786	Open in IMG/M
3300005444\|Ga0070694_100704012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	821	Open in IMG/M
3300005526\|Ga0073909_10079583	Not Available	1256	Open in IMG/M
3300005569\|Ga0066705_10022232	All Organisms → cellular organisms → Bacteria → Proteobacteria	3293	Open in IMG/M
3300005713\|Ga0066905_100621737	Not Available	917	Open in IMG/M
3300005844\|Ga0068862_100069707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3035	Open in IMG/M
3300006049\|Ga0075417_10149492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1086	Open in IMG/M
3300006572\|Ga0074051_11271998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	598	Open in IMG/M
3300006574\|Ga0074056_11334713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	609	Open in IMG/M
3300006580\|Ga0074049_13160654	Not Available	696	Open in IMG/M
3300006604\|Ga0074060_11975324	Not Available	857	Open in IMG/M
3300006605\|Ga0074057_12059579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	747	Open in IMG/M
3300006844\|Ga0075428_100264614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1851	Open in IMG/M
3300006845\|Ga0075421_101083678	Not Available	901	Open in IMG/M
3300006845\|Ga0075421_102012949	Not Available	615	Open in IMG/M
3300006853\|Ga0075420_101385577	Not Available	603	Open in IMG/M
3300006871\|Ga0075434_102333142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	538	Open in IMG/M
3300006903\|Ga0075426_10002509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	13129	Open in IMG/M
3300006918\|Ga0079216_10037251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2004	Open in IMG/M
3300006953\|Ga0074063_10106137	Not Available	1041	Open in IMG/M
3300009678\|Ga0105252_10082215	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1269	Open in IMG/M
3300010046\|Ga0126384_10076066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2401	Open in IMG/M
3300010397\|Ga0134124_10004377	All Organisms → cellular organisms → Bacteria → Proteobacteria	11353	Open in IMG/M
3300010400\|Ga0134122_10089388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2422	Open in IMG/M
3300011107\|Ga0151490_1644172	Not Available	708	Open in IMG/M
3300011403\|Ga0137313_1026839	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	944	Open in IMG/M
3300011415\|Ga0137325_1014234	Not Available	1563	Open in IMG/M
3300011420\|Ga0137314_1071646	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	843	Open in IMG/M
3300011430\|Ga0137423_1103394	Not Available	850	Open in IMG/M
3300011439\|Ga0137432_1007141	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	3089	Open in IMG/M
3300012203\|Ga0137399_10061025	All Organisms → cellular organisms → Bacteria	2789	Open in IMG/M
3300012203\|Ga0137399_10180182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1705	Open in IMG/M
3300012212\|Ga0150985_117146635	All Organisms → cellular organisms → Bacteria	1759	Open in IMG/M
3300012469\|Ga0150984_101649315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1059	Open in IMG/M
3300012469\|Ga0150984_102926230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → unclassified Rhodocyclaceae → Rhodocyclaceae bacterium	1190	Open in IMG/M
3300012685\|Ga0137397_10159590	Not Available	1672	Open in IMG/M
3300012918\|Ga0137396_10730488	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300012922\|Ga0137394_10033110	All Organisms → cellular organisms → Bacteria → Proteobacteria	4208	Open in IMG/M
3300012925\|Ga0137419_10265879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1298	Open in IMG/M
3300012951\|Ga0164300_10086247	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300012957\|Ga0164303_10028085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2271	Open in IMG/M
3300012958\|Ga0164299_10063200	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300012961\|Ga0164302_11357718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	578	Open in IMG/M
3300012989\|Ga0164305_11468032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	603	Open in IMG/M
3300013308\|Ga0157375_12913277	Not Available	572	Open in IMG/M
3300014879\|Ga0180062_1140103	Not Available	556	Open in IMG/M
3300015258\|Ga0180093_1141622	Not Available	608	Open in IMG/M
3300015371\|Ga0132258_10076420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7790	Open in IMG/M
3300015373\|Ga0132257_104263314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	520	Open in IMG/M
3300018422\|Ga0190265_10022601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	5054	Open in IMG/M
3300018468\|Ga0066662_10757975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	935	Open in IMG/M
3300019377\|Ga0190264_11259158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	620	Open in IMG/M
3300024177\|Ga0247686_1003567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1605	Open in IMG/M
3300024178\|Ga0247694_1021867	Not Available	719	Open in IMG/M
3300025907\|Ga0207645_10226768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1233	Open in IMG/M
3300025911\|Ga0207654_10017941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3709	Open in IMG/M
3300025913\|Ga0207695_10384618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1288	Open in IMG/M
3300025916\|Ga0207663_11335935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	577	Open in IMG/M
3300025941\|Ga0207711_10535977	Not Available	1092	Open in IMG/M
3300026041\|Ga0207639_10381178	Not Available	1266	Open in IMG/M
3300026121\|Ga0207683_10721597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	924	Open in IMG/M
3300027821\|Ga0209811_10020791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2149	Open in IMG/M
3300027873\|Ga0209814_10114257	All Organisms → cellular organisms → Bacteria → Proteobacteria	1149	Open in IMG/M
3300027886\|Ga0209486_10192072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1150	Open in IMG/M
3300028381\|Ga0268264_12411537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	532	Open in IMG/M
3300028536\|Ga0137415_10936436	Not Available	677	Open in IMG/M
3300028792\|Ga0307504_10027566	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300030006\|Ga0299907_11255859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	529	Open in IMG/M
3300030336\|Ga0247826_10630790	Not Available	825	Open in IMG/M
3300031184\|Ga0307499_10001793	All Organisms → cellular organisms → Bacteria → Proteobacteria	5801	Open in IMG/M
3300031198\|Ga0307500_10017324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1522	Open in IMG/M
3300031229\|Ga0299913_10843936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	888	Open in IMG/M
3300031538\|Ga0310888_10382114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	823	Open in IMG/M
3300031547\|Ga0310887_10589998	Not Available	680	Open in IMG/M
3300031720\|Ga0307469_10133325	All Organisms → cellular organisms → Bacteria → Proteobacteria	1824	Open in IMG/M
3300031740\|Ga0307468_100856071	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	782	Open in IMG/M
3300031740\|Ga0307468_100992741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	738	Open in IMG/M
3300031820\|Ga0307473_10033783	All Organisms → cellular organisms → Bacteria → Proteobacteria	2261	Open in IMG/M
3300031820\|Ga0307473_10108465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1496	Open in IMG/M
3300031854\|Ga0310904_10997436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	596	Open in IMG/M
3300031858\|Ga0310892_11050350	Not Available	576	Open in IMG/M
3300031892\|Ga0310893_10237822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	750	Open in IMG/M
3300031944\|Ga0310884_10099871	Not Available	1419	Open in IMG/M
3300031944\|Ga0310884_10161735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1165	Open in IMG/M
3300032012\|Ga0310902_10331250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	948	Open in IMG/M
3300032180\|Ga0307471_100625583	Not Available	1237	Open in IMG/M
3300032205\|Ga0307472_100184700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1566	Open in IMG/M
3300032205\|Ga0307472_101268460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	708	Open in IMG/M
3300033550\|Ga0247829_10655540	Not Available	873	Open in IMG/M
3300034151\|Ga0364935_0075943	Not Available	1009	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.30%
Host-Associated	Host-Associated	21.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.75%
Plants	Host-Associated → Plants	21.70%
Aquatic	Environmental → Aquatic	7.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.09%
Sediment	Environmental → Aquatic → Sediment	7.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.60%
Floodplain	Environmental → Terrestrial → Floodplain	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.55%
Loam	Environmental → Terrestrial → Soil → Loam	7.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.94%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.32%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.66%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.83%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.94%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.38%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014879	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10D	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300024177	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK27	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_07545502	2228664022	Soil	DDRLMAHDGLALDPGGDYLVATTQSSSTDVEAYGRTIRLAPFSYARLNLMQVLEGRHNEFWWAPMTKAFLAKLWALAGGRM
INPhiseqgaiiFebDRAFT_1005884942	3300000364	Soil	MIRFSNVQGDVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSTDVEAYGRTIRLAPFSYARLNLMQVLEGRHNEFWWAPMTKAFLAKLWALAGGRM*
F14TC_1073969112	3300000559	Soil	MIRFSNVRGDVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSADVEAYGRTIRLAPFSYARLSLIKMLEGRHNEYWWAPLTKVFLAKLWALAGGRM*
JGI10214J12806_106667683	3300000891	Soil	MIRFSNVQGEVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSADVQAYGKTIRLERFSYARLSLSKVLEGRHNEFWWAPLTKSFLSKLWALAGGRM*
C688J14111_102505791	3300001305	Soil	PAAMIRFSNVQGEVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSTDVQAYGRXIRLQRFSYARLSLTKVLEGRHNEFWWAPMTKSFLARLWTLAGGRM*
C688J18823_100401472	3300001686	Soil	MIRFSNVQGEVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSTDVQAYGRTIRLQRFSYARLSLTKVLEGRHNEFWWAPMTKSFLARLWTLAGGRM*
C688J18823_102145542	3300001686	Soil	MIRFSNVQGEVFIDDRRRDDRLMAHDGLALDPGGDYLVATTQSSSTDVEAYGRTIRLERFSYARLSLAKVLEGRHNEFWWAPMTKSFLARLWTLAGGRI*
Ga0062593_1004599772	3300004114	Soil	MIRFSNVQGEVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSADVEAYGRTIQLGRFSYARLSLNKVLEGRHNEFWWAPLTKLFLAKLWTLAGGRM*
Ga0062589_1010322852	3300004156	Soil	MIRFSNVQGDVLVDDKRKDDRRMAREGLTLDQDGEYLVATTQASSTDVHAYGKYIRLASSSYLRLGGNRALEGKHNELWAAKNTKLFLAKLWALAGGR*
Ga0062590_1006549441	3300004157	Soil	MIRFSNVQGDVFVDDRRRDDRLMARDGLALDPGGDYLVATTQNSSADVEAYGRTIRLAPFSYARLNLIQVLEGRHNEFWWAPMTKAFLAKLWALAGGRI*
Ga0062591_1013221342	3300004643	Soil	FIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSADVEAYGRTIQLGRFSYARLSLNKVLEGRHNEFWWAPLTKLFLAKLWTLAGGRM*
Ga0066684_107018771	3300005179	Soil	MIRFTNVRGDVFVDDRKKDDRLMAHDGLMLDPMGDYLVATTQSSSADVHASGKLARLGPFAYLRVGGNRFVEGKHNLIWIARETKSFLARIWQLVGGRF*
Ga0065705_102734502	3300005294	Switchgrass Rhizosphere	MIRFSNVHGDVFIDDRRRDDRLMARDGLALDPGGDYLVATTQTSSADVEAYGKTIRLAPFSYARLSLLKMLEGRHNEYWWAPMTKVFLDKLWALAGGRM*
Ga0065705_107108461	3300005294	Switchgrass Rhizosphere	MIRFSNVRGEVFIDDRRRDDRIMARDGLTLDDGGDYLVATTQSSSADIQAYGRTIRLDRSSYARLRPPSKVLEGRHNEIWWAPITKIFLAKLWALAGGRM*
Ga0070675_1000718892	3300005354	Miscanthus Rhizosphere	ARVEGWRATARANYTAAAMIRFSNVQGDVFVDDRRRDDRLMARDGLALDPSGDYLVATTQNSSADVEAYGRTIRLAPFSYARLNLIQVLEGRHNEFWWAPMTKAFLAKLWALAGGRI*
Ga0070711_1008289422	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	FSNVQGDVFVDDRRRDDRLMARDGLALDPGGDYLVATTQNSSADVEAYGRTIRLAPFSYARLNLIQVLEGRHNEFWWAPMTKAFLAKLWALAGGRI*
Ga0070694_1007040121	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MIRFSNVQGDVLVDDRRRDDRRMAHEGLTLDADGDYLVATTQASSTDVHAYGKYIRLGSSSYLRLGGNRAQEGRHNELWSAKNTKHFLARVWALAGGR*
Ga0073909_100795833	3300005526	Surface Soil	MIRFSNVHGEVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSADVQAYGRVIRLERFSYARLSQAKVLEGRHNEFWLAPMTKIFLAKLWALAGG
Ga0066705_100222322	3300005569	Soil	MIRFTNVRGDVFVDDRKKDDRLMAHDGLMLDPMGDYLVATTQSSSADVSASGKLARLGPFAYLRVGGNRFVEGKHNLIWIARETKSFLARIWQLVGGRY*
Ga0066905_1006217372	3300005713	Tropical Forest Soil	MIRFSNVQGDVFVDDRRRDDRLMARDGLALDPGGDYLVATTQNSRADVQAYGRTIRLDTFSYARLNLAKILEGRHNLFWWAPRTKAFLAQIWALAGGRM*
Ga0068862_1000697072	3300005844	Switchgrass Rhizosphere	LARVEGWRATARANYTAAAMIRFSNVQGDVFVDDRRRDDRLMARDGLALDPGGDYLVATTQNSSADVEAYGRTIRLAPFSYARLNLIQVLEGRHNEFWWAPMTKAFLAKLWALAGGRI*
Ga0075417_101494922	3300006049	Populus Rhizosphere	MIRFSNVHGDVFIDDRRRDDRLMARDGLALDPGGDYLVATTQTSSADVEAYGKTIRLAPFSYARLSLIKMLEGRHNEYWWAPMTKVFLAKLWALAGGRV*
Ga0074051_112719981	3300006572	Soil	MIRFSNVQGEVFIDDRKRDDRLMARDGLALDPGGDYLVATTQTSSADVQAYGRNIRLAQFSYARLSLSKVLEGRHNEFWRAPMTKLFLAKLWALAGGRM*
Ga0074056_113347131	3300006574	Soil	DDRKRDDRLMARDGLALDPGGDYLVATTQTSSADVQAYGRNIRLAQFSYARLSLSKVLEGRHNEFWRAPMTKLFLAKLWALAGGRM*
Ga0074049_131606541	3300006580	Soil	MIRFSNVRGEVFIDDRRRDDRLMARDGLVLDPGGDYLVATTQSSSADVQAYGRMIRLERFSYARLSLAKVLEGRHNEFWLAPMTKIFLAKLWALA
Ga0074060_119753242	3300006604	Soil	MIRFSNVQGEVFIDDRKRDDRLMARDGLALDPGGDYLVATTQTSSADVQAYGRTIRLERFSFVRLSLSKVLEGRHNEFWWAPMTKLFLAKLWALAGGRM*
Ga0074057_120595792	3300006605	Soil	PAAMIRFSNVQGEVFIDDRKRDDRLMARDGLALDPGGDYLVATTQTSSADVQAYGRNIRLAQFSYARLSLSKVLEGRHNEFWRAPMTKLFLAKLWALAGGRM*
Ga0075428_1002646142	3300006844	Populus Rhizosphere	MIRFSNVHGDVFVDDRRKDDRVMAYDGLALDPRGDYLVATTQASSADVQAYGKTFRLAHYSFLRLNLSRVLEGRHNEFWWAPLTKLFLAKLWALAGGRI*
Ga0075421_1010836782	3300006845	Populus Rhizosphere	VIRFTNVRGDVLVDDRRTDDRIMARDGLVLDEGGDYLVATTQTSSAEVHAYGKLLRLAPFSFLRVGRNRMLEGKHGEFWVARHTKVFLAKLWALAGGRM*
Ga0075421_1020129492	3300006845	Populus Rhizosphere	MIRFSNVHGDVFVDDRRKDDRVMAYDGLALDPRGDYLVATTQASSADVQAYGKTFRLAHYSFLRLNLSRVLEGRHNEFWWAPLTKLFLAKLWALAGG
Ga0075420_1013855772	3300006853	Populus Rhizosphere	MIRFSNVHGDVFVDDRRKDDRVMAYDGLALDPRGDYLVATTQASSADVQAYGKTFRLAHYSFLRLNLSRVLEGRHNEFWWAPLTKLFLAK
Ga0075434_1023331421	3300006871	Populus Rhizosphere	MIRFSNVQGDVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSADVQAYGRTIRLERFSYARLSLLKVLEGRHNEFWWAPMTKVFLAKLWALAGGRL*
Ga0075426_100025092	3300006903	Populus Rhizosphere	MIRFMNVQGDVLVDDRKKDDRFMAHDGLMLDLMGDYLVVTTQSSSADVQTPNKMTRLGPFSYLRVGGTRLLEGKHNILWIARETKAFLARIWALAGGRY*
Ga0079216_100372513	3300006918	Agricultural Soil	MIRFTNVQGYVLVDDRKKDDRITARDGLALDPMGDYLVATTQTSSAELHAYGKVVRLAPFSYLRVGGTRVLEGKHNEFWVARNTKIFLAKLWALAGGRS*
Ga0074063_101061373	3300006953	Soil	MIRFSNVHGEVFIDDRRRDDRLMARDGLVLDPGGDYLVATTQSSSADVQAYGRTIRLDRFSYARLSLAKVLEGRHNEFWWAPMTK
Ga0105252_100822153	3300009678	Soil	MIRFSNVQGEVLVDDRRKDDRVMARDGLALDPGGDYLVATTQTSSADVHAYGRTIRLEQFSYARLNMSNVLEGRHNEFWWAPKTKLFLAKLWALVGGRM*
Ga0126384_100760665	3300010046	Tropical Forest Soil	MIRFSNVYGDVFIDDRKRDDRLMARDGLALDPGGDYLVATTQSSTADIQAYGRTIRLDRFSYARLNLAQILEGRHNLFWLAPQTKIFLANIWALVGGRM*
Ga0134124_100043774	3300010397	Terrestrial Soil	MIRFSNVHGNVFIDDRRRDDRVMARDGLALDPGGDYLVATTQSSSADVEAYGKTIRLAPFSYARLNLSKMLEGRHNEYWWAPLTKVFLAKLWALAGGRM*
Ga0134122_100893882	3300010400	Terrestrial Soil	MIRFSNVRGEVFIDDRRRDDRLMARDGLVLDPGGDYLVATTQSSSADVQAYGRTIRMDRFSYARLSLTKVLEGRHNEYWLAPMTKIFLAKLWALAGGRI*
Ga0151490_16441721	3300011107	Soil	MIRFSNVQGEVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSADVQAYGRNIRLAQFSYARLSLSKVLEGRHNEFWRAPMTKLF
Ga0137313_10268391	3300011403	Soil	MIRFSNVQGDVLVDDRRKDDRVMARDGLALDPGGDYLVATTQTSSADVHAYGRTIRLEQFSYARLSLNKVLEGRHNEFWWAPKTKLFLAKLWALVGGR
Ga0137325_10142344	3300011415	Soil	MIRFSNVQGDVLVDDRRKDDRVMARDGLALDPGGDYLVATTQTSSADVHAYGRTIRLEQFSYARLNMSKVLEGRHNEFWWAPKTKLFLAKLW
Ga0137314_10716462	3300011420	Soil	MIRFSNVQGDVLVDDRRKDDRVMARDGLALDPGGDYLVATTQTSSADVHAYGRTIRLEQFSYARLNMSNVLEGRHNEFWWAPKTKLFLAKLWALVGGRM*
Ga0137423_11033942	3300011430	Soil	MIRFSNVQGEVLVDDRRKDDRVMARDGLALDPGGDYLVATTQTSSADVHAYGRTIRLEQFSYARLSLNKVLEGRHNEFWWAPKTKLFLAKLWALVGGRM*
Ga0137432_10071412	3300011439	Soil	MIRFSNVQGDVLVDDRRKDDRVMARDGLALDPGGDYLVATTQTSSADVHAYGRTIRLEQFSYARLNLNKVLEGRHNEFWWAPKTKLFLAKLWALVGGRM*
Ga0137399_100610253	3300012203	Vadose Zone Soil	MIRLANVQGDVLVDDRKKDDRFMARDGLVLDPLGDYLVVTTQASRADVHTPAKMTHLGPFSYLRVGSNRLLEGKHNVIWIARETKAFLAKIWALAGGRF*
Ga0137399_101801822	3300012203	Vadose Zone Soil	MIRFANVQGEVLVDDRRKDDQFMAHDGLMLDPIGDYLVVTTQSSSADVQTPGRTTRLGPYSYLRVGGNRLLDGKHNLIWIARETKAFLARIWALAGGRF*
Ga0150985_1171466351	3300012212	Avena Fatua Rhizosphere	VRGEVFIDDRRRDDRLMARDGLALDPGGDYLVATTQTSSADVQAYGRMIRLDRFSYARLSAAKVLEGRHNEFWLAPMTKIFLAKLWVLAGGRI*
Ga0150984_1016493152	3300012469	Avena Fatua Rhizosphere	VFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSTDVQAYGRTIRLQRFSYARLSLTKVLEGRHNEFWWAPMTKSFLARLWTLAGGRM*
Ga0150984_1029262301	3300012469	Avena Fatua Rhizosphere	GGLRDGRASAYSPAAMIRFSNVRGEVFIDDRRRDDRLMARDGLALDPGGDYLVATTQTSSADVQAYGRMIRLDRFSYARLSAAKVLEGRHNEFWLAPMTKIFLAKLWVLAGGRI*
Ga0137397_101595901	3300012685	Vadose Zone Soil	MIRFSNVQGEVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSADVQAYGRMIRLERFSYARLSVARVLEGRHNEFWLAPMTKIFLAKLWA
Ga0137396_107304881	3300012918	Vadose Zone Soil	MIRLANVQGDVLVDDRRKDDRFMARDGLVLDPLGDYLVVTTQASRADVHTPAKMTHLGPFSYLRVGSNRLLEGKHNVIWIARETKAFLAKIWALAGGRF*
Ga0137394_100331102	3300012922	Vadose Zone Soil	MIRFSNVQGEVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSADVQAYGRMIRLERFSYARLSVARVLEGRHNEFWLAPMTKIFLAKLWALAGGRI*
Ga0137419_102658792	3300012925	Vadose Zone Soil	MIRFANVQGDVLVDDRRKDDQFMAHDGLMLDPIGDYLVVTTQSSSADVQTPGRTTRLGPYSYLRVGGNRLLDGKHNLIWIARETKAFLARIWALAGGRF*
Ga0164300_100862472	3300012951	Soil	MIRFSNVQGDVFVDDRRRDDRLMARDGLALDPGGDYLVATTQNSSADVEAYGRTIRLAPFSYARLNLIQVLEGRHNEFWLAPMTKIFLAKLWALAGGRI*
Ga0164303_100280854	3300012957	Soil	MIRFSNVHGEVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSADVQAYGRTIRMDRFSYARLSLTKVLEGRHNEYWLAPMTKIFLAKLWALAGGRI*
Ga0164299_100632002	3300012958	Soil	MIRFSNVHGEVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSADVQAYGRVIRLERFSYARLSQAKVLEGRHNEFWLAPMTKIFLAKLWALAGGRI*
Ga0164302_113577182	3300012961	Soil	SNVHGEVFIDDRRRDDRLMARDGLALDPGADYLVATTQSSSADVQAYGRVIRLERFSYARLSQAKVLEGRHNEFWLAPMTKIFLAKLWALAGGRI*
Ga0164305_114680322	3300012989	Soil	DDRVMARDGLALDPGGDYLVATTQSSSADVEAYGKTIRLAPFSYARLSQAKVLEGRHNEFWLAPMTKIFLAKLWALAGGRI*
Ga0157375_129132772	3300013308	Miscanthus Rhizosphere	MIRFSNVQGDVFVDDRRRDDRLMARDGLALDPGGDYLVATTQNSSADFEAYGRTIRLAPFSYARLNLIQVLEGRHNEFWWAPMTKAFLAKL
Ga0180062_11401031	3300014879	Soil	MIRFSNVQGDVLVDDRRKDDRVMARDGLALDPGGDYLVATTQTSSADVHAYGRTIRLEQFSYARLSLNKVLEGRHNEFWWAPKTKLFLAKLWALVGGRM*
Ga0180093_11416222	3300015258	Soil	MIRFSNVQGEVLVDDRRKDDRVMARDGLALDPGGDYLVATTQTSSADVHAYGRTIRLEQFSYARLNMSNVLEGRHNEFWWAPKTKLFLAKLWALV
Ga0132258_100764202	3300015371	Arabidopsis Rhizosphere	MIRFSNVRGEVFIDDRRRDDRIMARDGLTLDDGGDYLVATTQSSSVDIQAYGRTIRLDRSSYARLRPPSKVLEGRHNEIWWAPITKIFLAKLWALAGGRM*
Ga0132257_1042633141	3300015373	Arabidopsis Rhizosphere	VHGDVFIDDRRRDDRLMARDGLVLDPGGDYLVATTQSSSTDVEAYGRTIRLDPFSYARLNLSKMLEGRHNEYWWAPMTKVFLAKLWALAGGRM*
Ga0190265_100226012	3300018422	Soil	MIRFANVQGYVLVDDRRKDDRFSARDGLALDPSGDYLVATTQASSADVHAYGKIIRLAPYSYLRVGGNRVLQGKHGEIWIARNTRLFLSKLWALAGGRL
Ga0066662_107579752	3300018468	Grasslands Soil	MIRFTNVRGDVFVDDRKKDDRLMAHDGLMLDPMGDYLVATTQSSSADVSASGKLARLGPFAYLRVGGNRFVEGKHNLIWIARETKSFLARIWQLVGGRY
Ga0190264_112591582	3300019377	Soil	AHDGLALDPGGDYLVATTQASSAEVHAYGKTSRLGPFSFARVGRNQLVEGKHGEHWVAQNTKLFLARLWALAGGRM
Ga0247686_10035671	3300024177	Soil	NFQGDVFVDDRRRDDRLMARDGLALDPGGDYLVATTQNSSADVEAYGRTIRLAPFSYARLNLIQVLEGRHNEFWWAPMTKAFLAKLWALAGGRI
Ga0247694_10218671	3300024178	Soil	MIRFSNVHGDVFIDDRRRDDRLMARDGLVLDPGGDYLVATTQSSSTDVEAYGRTIRLDPFSYARLNLSKMLEGRHNEYWWAPMTKVFLAKLW
Ga0207645_102267681	3300025907	Miscanthus Rhizosphere	RRRDDRLMARDGLALDPGGDYLVATTQNSSADVEAYGRTIRLAPFSYARLNLIQVLEGRHNEFWWAPMTKAFLAKLWALAGGRI
Ga0207654_100179413	3300025911	Corn Rhizosphere	LARVEGWRATARANYTAAAMIRFSNVQGDVFVDDRRRDDRLMARDGLALDPGGDYLVATTQNSSADVEAYGRTIRLAPFSYARLNLIQVLEGRHNEFWWAPMTKAFLAKLWALAGGRI
Ga0207695_103846182	3300025913	Corn Rhizosphere	QGDVFVDDRRRDDRLMARDGLALDPGGDYLVATTQNSSADVEAYGRTIRLAPFSYARLNLIQVLEGRHNEFWLAPMTKAFLAKLWALAGGRI
Ga0207663_113359351	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	FSNVQGDVFVDDRRRDDRLMARDGLALDPGGDYLVATTQNSSADVEAYGRTIRLAPFSYARLNLIQVLEGRHNEFWWAPMTKAFLAKLWALAGGRI
Ga0207711_105359773	3300025941	Switchgrass Rhizosphere	MIRFSNVQGDVFVDDRRRDDRLMARDGLALDPGGDYLVATTQNSSADVEAYGRTIRLAPFSYARLNLIQVLEGRHNEFWWAPM
Ga0207639_103811781	3300026041	Corn Rhizosphere	MIRFSNVQGDVFVDDRRRDDRLMARDGLALDPGGDYLVATTQNSSADVEAYGRTIRLAPFSYARLNLIQVLEGRHNEFWWAPMTKAFLAKLWALA
Ga0207683_107215971	3300026121	Miscanthus Rhizosphere	DDRLMARDGLALDPGGDYLVATTQNSSADVEAYGRTIRLAPFSYARLNLIQVLEGRHNEFWWAPMTKAFLAKLWALAGGRI
Ga0209811_100207912	3300027821	Surface Soil	LRGGRASAYSPAAMIRFSNVHGEVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSADVQAYGRMIRLERFSYARLSLAKVLEGRHNEFWLAPMTKIFLAKLWALAGGRI
Ga0209814_101142572	3300027873	Populus Rhizosphere	MIRFSNVHGDVFIDDRRRDDRLMARDGLALDPGGDYLVATTQTSSADVEAYGKTIRLAPFSYARLSLIKMLEGRHNEYWWAPMTKVFLAKLWALAGGRV
Ga0209486_101920721	3300027886	Agricultural Soil	WGIRGTAGEVPMIRFTNVQGYVLVDDRKKDDRITARDGLALDPMGDYLVATTQTSSAELHAYGKVVRLAPFSYLRVGGTRVLEGKHNEFWVARNTKIFLAKLWALAGGRS
Ga0268264_124115372	3300028381	Switchgrass Rhizosphere	GWRVTARANYTAAAMIRFSNVHGNVFIDDRRRDDRVMARDGLALDPGGDYLVATTQSSSADVEAYGKTIRLAPFSYARLNLSKMLEGRHNEYWWAPLTKVFLAKLWALAGGRM
Ga0137415_109364362	3300028536	Vadose Zone Soil	MIRLANVQGDVLVDDRKKDDRFMARDGLVLDPLGDYLVVTTQASRADVHTPAKMTHLGPFSYLRVGSNRLLEGKHNVIWIARETKAFLAKIWALAGGRF
Ga0307504_100275662	3300028792	Soil	MIRFSNVNGDVFIDDRMRDDRLMARNGLALDPGGDYLVATTQSSSADVEAYGRTIRLGRFSYARLRLNKVVEGRHNEFWWAPKTKIFLAKLWALAGGRM
Ga0299907_112558592	3300030006	Soil	GRLMIRFANVQGYVLVDDRRKDDRFSARDGLALDPTGDYLVATTQESSADVHAYGKIIRLAPYSYLRVGGNRVLEGKHGERWIARNTRLFLARLWALAGGRV
Ga0247826_106307902	3300030336	Soil	MIRFSNVHGDVFIDDRRRDDRLMARDGLALDPGGDYLVATTQTSSADVEAYGKTIRLAPFSYARLSLLKMLEGRHNEYWWAPMTKVFLDKLWALAGGRM
Ga0307499_100017935	3300031184	Soil	MIRFSNVRGEVFIDDRTRDDRLMARDGLALDPGGDYLVATTQSSSTDVQAYGRTIRLGQFSYARLNLSKVLEGRHNEFWWAPMTKIFLAKLWALAGGRI
Ga0307500_100173241	3300031198	Soil	AMIRFSNVRGEVFIDDRTRDDRLMARDGLALDPGGDYLVATTQSSSTDVQAYGRTIRLGQFSYARLNLSKVLEGRHNEFWWAPMTKIFLAKLWALAGGRI
Ga0299913_108439362	3300031229	Soil	MIRFANVQGYVLVDDRRKDDRFSARDGLALDPTGDYLVATTQESSADVHAYGKIIRLAPYSYLRVGGNRVLEGKHGERWIARNTRLFLARLWALAGGRV
Ga0310888_103821142	3300031538	Soil	MIRFSNVHGDVFIDDRRRDDRLMARDGLALDPGGDYLVATTQTSSADVEAYGKTIRLAPFSYARLSLLKMLEGRHNEYWWAPMTKVFLAKLWALAGGRM
Ga0310887_105899981	3300031547	Soil	MIRFSNVHGDVFIDDRRRDDRLMARDGLALDPGGDYLVATTQNSSADVEAYGRTIRLDPFSYARLNLSKMLEGRHNEYWWAPMT
Ga0307469_101333252	3300031720	Hardwood Forest Soil	MIRFSNVRGDVFIDDRRRDDRLMARDGLALDPGGDYLVATTQTSSADVEAYGRTIRLAPFSYARLNLTKILEGKHNEFWWAPMTKVFLAKLWALAGGRI
Ga0307468_1008560711	3300031740	Hardwood Forest Soil	MIRFSNVQGEVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSADVQAYGRTIRLERFSYARLSLSKVLEGKHNEFWWAPLTKTFLAKLWALAGGRM
Ga0307468_1009927412	3300031740	Hardwood Forest Soil	MIRFTNVRGDVLVDDRRTDDRIMARDGLALDPGGDYLVATTQSSSAEVHAYGKLTRLGPFSFLRVGRNRLLEGKHGEFWVARNTKLFLAKLWTLAGGRM
Ga0307473_100337832	3300031820	Hardwood Forest Soil	MIRFSNVQGDVFVDDRRRDDRLMARDGLALDPGGDYLVATTQTSSADVEAYGRTIRLAPFSYARLNLTKILEGKHNEFWWAPMTKVFLAKLWALAGGRI
Ga0307473_101084652	3300031820	Hardwood Forest Soil	MIRFVNVQGDVLVDDRRKDDRFMAHDGLMLDPMGDYLVVTTQASSADVHAAGKMTRLGPYSYLRAGGNRLVNGKHNIVWIARDTKAFLARIWALAGGRF
Ga0310904_109974361	3300031854	Soil	SLARVEGWRATARANYTAAAMIRFSNVHGEVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSADVQAYGRTIRLERFSYARLSPSKVLEGRHNEFWWAPMTKAFLAKLWALAGGRI
Ga0310892_102458201	3300031858	Soil	RLMARDGLALDPGGDYLVATTQTSSADVEAYGKTIRLAPFSYARLSLLKMLEGRHNEYWWAPMTKVFLDKLWALAGGRM
Ga0310892_110503501	3300031858	Soil	MIRFSNVHGEVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSADVQAYGRVIRLERFSYARLSQAKVLEGRHNEFWLAPMTKIFLAKLWALAGGRM
Ga0310893_102378221	3300031892	Soil	DDRRRDDRLMARDGLALDPGGDYLVATTQTSSADVEAYGKTIRLAPFSYARLNLIQVLEGRHNEFWWAPMTKAFLAKLWALAGGRI
Ga0310884_100998711	3300031944	Soil	MIRFSNVHGEVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSADVQAYGRVIRLERFSYARLSQAKVLEGRHNEFWLAPMTKIFLAKLWALAGGRI
Ga0310884_101617352	3300031944	Soil	PRANYTAAAMIRFSNVHGDVFIDDRRRDDRLMARDGLALDPGGDYLVATTQTSSADVEAYGKTIRLAPFSYARLSLLKMLEGRHNEYWWAPMTKVFLDKLWALAGGRM
Ga0310902_103312502	3300032012	Soil	MIRFSNVHGDVFIDDRRRDDRLMARDGLALDPGGDYLVATTQSSSADVQAYGRVIRLERFSYARLSQAKVLEGRHNEFWLAPMTKIFLAKLWALAGGRI
Ga0307471_1006255831	3300032180	Hardwood Forest Soil	MIRFSNVQGDVFVDDRRRDDRLMARDGLALDPGGDYLVATTQTSSADVEAYGRTIRLAPFSYARLNLTKILEGKHNEFWWAPMTKVFLAKLW
Ga0307472_1001847002	3300032205	Hardwood Forest Soil	MGMIRFVNVQGDVLVDDRRKDDRFMAHDGLMLDPMGDYLVVTTQASSADVHAAGKMTRLGPYSYLRAGGNRLVNGKHNIVWIARDTKAFLARIWALAGGRF
Ga0307472_1012684601	3300032205	Hardwood Forest Soil	NVQGDVFVDDRWRDDRLMARDGLALDPGGDYLVATTQTSSADVQAYGRTIRMGPFSSARLNMIKVLQGRHNEFWLAPMTKVFLAKLWALAGGRI
Ga0247829_106555402	3300033550	Soil	MIRFSNVQGDVFVDDRRRDDRLMARDGLALDPGGDYLVATTQSSSADVQAYGRTIQLGRFSYARLNLTRVLEGKHNEFWWAPKTKVFLAKLWALAGGRM
Ga0364935_0075943_147_446	3300034151	Sediment	MIRFSNVQGEVLVDDRRKDDRVMARDGLALDPGGDYLVATTQTSSADVHAYGRTIRLEQFSYARLNMSNVLEGRHNEFWWAPKTKLFLAKLWALVGGRM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093831

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences