Metagenome / Metatranscriptome Family F093828

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093828
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	65 residues
Representative Sequence	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPL
Number of Associated Samples	98
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.96 %
% of genes near scaffold ends (potentially truncated)	76.42 %
% of genes from short scaffolds (< 2000 bps)	95.28 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.113 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.321 % of family members)
Environment Ontology (ENVO)	Unclassified (47.170 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.264 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.12% β-sheet: 21.88% Coil/Unstructured: 75.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF02371	Transposase_20	83.02
PF13340	DUF4096	6.60
PF13737	DDE_Tnp_1_5	0.94
PF13683	rve_3	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	83.02

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.11 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.11 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.11 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	89.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.89 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	88.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.89 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	68.87 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.72 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.72 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	1.89 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	68.87 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.89 %
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	1.89 %
Unclassified	root	N/A	1.89 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.94 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.89 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples	1.89 %
Unclassified	root	N/A	1.89 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.94 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.94 %

Name	Rank	Taxonomy	Distribution
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1.89 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.89 %
Unclassified	root	N/A	1.89 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.94 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001989\|JGI24739J22299_10045187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1447	Open in IMG/M
3300001990\|JGI24737J22298_10143123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	706	Open in IMG/M
3300005162\|Ga0066814_10032438	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300005290\|Ga0065712_10231534	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300005295\|Ga0065707_10183789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1401	Open in IMG/M
3300005327\|Ga0070658_10532639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1016	Open in IMG/M
3300005328\|Ga0070676_10185923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1354	Open in IMG/M
3300005329\|Ga0070683_101036995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	787	Open in IMG/M
3300005330\|Ga0070690_100242477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1271	Open in IMG/M
3300005337\|Ga0070682_100428249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1007	Open in IMG/M
3300005338\|Ga0068868_100166324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1824	Open in IMG/M
3300005338\|Ga0068868_100531923	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300005544\|Ga0070686_100150920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1627	Open in IMG/M
3300005560\|Ga0066670_10434144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	809	Open in IMG/M
3300005564\|Ga0070664_101120394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	741	Open in IMG/M
3300005568\|Ga0066703_10391894	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300005575\|Ga0066702_10107942	Not Available	1601	Open in IMG/M
3300005577\|Ga0068857_102105872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	554	Open in IMG/M
3300005578\|Ga0068854_100235476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1455	Open in IMG/M
3300005718\|Ga0068866_11111857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	566	Open in IMG/M
3300005834\|Ga0068851_10560203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	691	Open in IMG/M
3300005842\|Ga0068858_101333247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	706	Open in IMG/M
3300006573\|Ga0074055_11860408	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300006606\|Ga0074062_10003235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	546	Open in IMG/M
3300006755\|Ga0079222_10809426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	767	Open in IMG/M
3300006806\|Ga0079220_10351696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	937	Open in IMG/M
3300006954\|Ga0079219_10080319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1529	Open in IMG/M
3300006954\|Ga0079219_10382695	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300009137\|Ga0066709_102288291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	741	Open in IMG/M
3300009148\|Ga0105243_10442185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1218	Open in IMG/M
3300009162\|Ga0075423_11737530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	672	Open in IMG/M
3300009553\|Ga0105249_10123384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2464	Open in IMG/M
3300009553\|Ga0105249_10461657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1310	Open in IMG/M
3300009553\|Ga0105249_11146723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	848	Open in IMG/M
3300009840\|Ga0126313_10304219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1248	Open in IMG/M
3300010044\|Ga0126310_10819405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	717	Open in IMG/M
3300010375\|Ga0105239_10389131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1577	Open in IMG/M
3300010403\|Ga0134123_13266121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	523	Open in IMG/M
3300011106\|Ga0151489_1421594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	689	Open in IMG/M
3300012382\|Ga0134038_1178289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	596	Open in IMG/M
3300012912\|Ga0157306_10006897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2111	Open in IMG/M
3300012984\|Ga0164309_11677557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	545	Open in IMG/M
3300012986\|Ga0164304_11077038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	641	Open in IMG/M
3300013102\|Ga0157371_10095441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2108	Open in IMG/M
3300013105\|Ga0157369_10323952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1602	Open in IMG/M
3300014325\|Ga0163163_10325626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1591	Open in IMG/M
3300014487\|Ga0182000_10346655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	638	Open in IMG/M
3300014497\|Ga0182008_10469241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	687	Open in IMG/M
3300014497\|Ga0182008_10841616	Not Available	536	Open in IMG/M
3300015372\|Ga0132256_101637120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	753	Open in IMG/M
3300015374\|Ga0132255_103183458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	700	Open in IMG/M
3300018465\|Ga0190269_11202060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	596	Open in IMG/M
3300018466\|Ga0190268_10659431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	758	Open in IMG/M
3300018468\|Ga0066662_12649482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	530	Open in IMG/M
3300018476\|Ga0190274_10230590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1660	Open in IMG/M
3300018481\|Ga0190271_13793989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	506	Open in IMG/M
3300022883\|Ga0247786_1012292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1583	Open in IMG/M
3300023102\|Ga0247754_1151514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	576	Open in IMG/M
3300024055\|Ga0247794_10111981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	822	Open in IMG/M
3300025893\|Ga0207682_10158863	All Organisms → cellular organisms → Bacteria → Proteobacteria	1023	Open in IMG/M
3300025898\|Ga0207692_10134646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1399	Open in IMG/M
3300025903\|Ga0207680_10493743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	871	Open in IMG/M
3300025904\|Ga0207647_10624699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	593	Open in IMG/M
3300025909\|Ga0207705_10649787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	820	Open in IMG/M
3300025911\|Ga0207654_10144482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1521	Open in IMG/M
3300025917\|Ga0207660_10999741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	682	Open in IMG/M
3300025924\|Ga0207694_11315231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	611	Open in IMG/M
3300025926\|Ga0207659_10233001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1486	Open in IMG/M
3300025927\|Ga0207687_10225855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1477	Open in IMG/M
3300025930\|Ga0207701_10090378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	2756	Open in IMG/M
3300025931\|Ga0207644_10465660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1039	Open in IMG/M
3300025932\|Ga0207690_10962865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	709	Open in IMG/M
3300025934\|Ga0207686_10758205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	775	Open in IMG/M
3300025936\|Ga0207670_11122609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	664	Open in IMG/M
3300025938\|Ga0207704_10453244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1024	Open in IMG/M
3300025941\|Ga0207711_10335286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1399	Open in IMG/M
3300025942\|Ga0207689_10149644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1924	Open in IMG/M
3300025945\|Ga0207679_10286216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1415	Open in IMG/M
3300025949\|Ga0207667_10437910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1329	Open in IMG/M
3300025961\|Ga0207712_10308895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1301	Open in IMG/M
3300025961\|Ga0207712_10914603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M
3300025972\|Ga0207668_10270696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1388	Open in IMG/M
3300025972\|Ga0207668_12018778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	519	Open in IMG/M
3300025981\|Ga0207640_10508866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1004	Open in IMG/M
3300026035\|Ga0207703_10332382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1394	Open in IMG/M
3300026078\|Ga0207702_12289044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	528	Open in IMG/M
3300026078\|Ga0207702_12479433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	505	Open in IMG/M
3300026088\|Ga0207641_12254004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	544	Open in IMG/M
3300026095\|Ga0207676_10199325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1767	Open in IMG/M
3300026142\|Ga0207698_10106951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2334	Open in IMG/M
3300027036\|Ga0207467_1012740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	660	Open in IMG/M
3300027787\|Ga0209074_10352385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	604	Open in IMG/M
3300027795\|Ga0209139_10365069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	504	Open in IMG/M
3300028589\|Ga0247818_10578241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	771	Open in IMG/M
3300028592\|Ga0247822_11179020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	638	Open in IMG/M
3300028597\|Ga0247820_10640927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	736	Open in IMG/M
3300028782\|Ga0307306_10150162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	647	Open in IMG/M
3300028810\|Ga0307294_10321239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	566	Open in IMG/M
3300028875\|Ga0307289_10064882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1470	Open in IMG/M
3300028885\|Ga0307304_10293611	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300030514\|Ga0268253_10049481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1100	Open in IMG/M
3300031858\|Ga0310892_10359414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	937	Open in IMG/M
3300032000\|Ga0310903_10278052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	816	Open in IMG/M
3300032012\|Ga0310902_10949194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	594	Open in IMG/M
3300033475\|Ga0310811_10615435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1085	Open in IMG/M
3300033551\|Ga0247830_10506262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	950	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.94%
Environmental	Environmental	49.06%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.94%
Terrestrial	Environmental → Terrestrial	48.11%
Aquatic	Environmental → Aquatic	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.75%
Freshwater	Environmental → Aquatic → Freshwater	0.94%
Roots	Host-Associated → Plants → Roots	0.94%
Phylloplane	Host-Associated → Plants → Phylloplane	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.51%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.26%
Loam	Environmental → Terrestrial → Soil → Loam	6.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.49%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.94%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.32%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	10.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.89%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.94%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001989	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5	Host-Associated	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012382	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027036	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A5-10 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24739J22299_100451871	3300001989	Corn Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPLQGKGKHQ
JGI24737J22298_101431232	3300001990	Corn Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNGGLDRGAAIR
Ga0066814_100324381	3300005162	Soil	QAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPALTAKRTMTRAGDVNDGLDRGAAIRERPLQGKGKHQECRDA*
Ga0065712_102315341	3300005290	Miscanthus Rhizosphere	KLVKYANTHRPRARVQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPPRVKSAFESELPCR*
Ga0065707_101837892	3300005295	Switchgrass Rhizosphere	VQAIARRAGGRVINASPLWTLQCLSSGPDQMLRQPELTAKRTMTRAGDVNSGLDGGSAIR
Ga0070658_105326391	3300005327	Corn Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERLLIARWSGTLAPARP*
Ga0070676_101859232	3300005328	Miscanthus Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPLQGKGKHQECRDA*
Ga0070683_1010369951	3300005329	Corn Rhizosphere	VQAIARRAGGRVINVSPLWTLQCLSSGPDQMLRQPALTAKRTMTRAG
Ga0070690_1002424772	3300005330	Switchgrass Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVN
Ga0070682_1004282491	3300005337	Corn Rhizosphere	RVQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPALTAKRTMTRAGDVNDGLDRGAAIRERLLIARWLETLAPARH*
Ga0068868_1001663242	3300005338	Miscanthus Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERLLIARWLETLAPARH*
Ga0068868_1005319231	3300005338	Miscanthus Rhizosphere	QCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRSAAIRERPLQGKGKHQECRDA*
Ga0070686_1001509204	3300005544	Switchgrass Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNRDLDGGAAIR
Ga0066670_104341442	3300005560	Soil	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPALTAKRTMTRAGDVNDGLDRGAAIRAVSDRVET*
Ga0070664_1011203941	3300005564	Corn Rhizosphere	VQAIARRADGHVINVSPLWTLQCLSSGPNQMLRQPTLTAKRTMTRAGDVNRDLDGGAAIRERLLIARWSGILAPARH*
Ga0066703_103918943	3300005568	Soil	LWTLQCLSSGPDQMLRQLALTAKRTMTRAGDVNDGLDRGAAIRERPPQGKGKHQECRDA*
Ga0066702_101079421	3300005575	Soil	AAGRWARVNVSPLWTLQCLCSGPDQMLRQLALTAKRTMTRVGNVNGSLDEGAAIREPAAVRK*
Ga0068857_1021058721	3300005577	Corn Rhizosphere	VQAIARRADGHVINVSPLWTLQCLSSGPNQMLRQPTLTAKRTMTRAGDVN
Ga0068854_1002354763	3300005578	Corn Rhizosphere	SPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNGGLDRGAAIREPAAIRK*
Ga0068866_111118571	3300005718	Miscanthus Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPLQG
Ga0068851_105602032	3300005834	Corn Rhizosphere	VINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERP
Ga0068858_1013332471	3300005842	Switchgrass Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPLQGKGKHQECHDA*
Ga0074055_118604082	3300006573	Soil	VINVSPLWTLQCLSSGPDQMLRQPALTAKRTMTRAGDVNDGLDRGAAIRERPLQGKGKHQECRDA*
Ga0074062_100032351	3300006606	Soil	VINVSPLWTLQCLSSGPDQMLRQPALTAKRTMTRAGDVNDGLDRGAAIRERPLQGKGKHQECR
Ga0079222_108094261	3300006755	Agricultural Soil	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIREPAAIRK*
Ga0079220_103516961	3300006806	Agricultural Soil	VQAIARRGGGRVINVSPLWTLQCLSSGPDQMLRQLALTAKRTMTRAGGVKGGLDRSAAIRERPLQGKGKH
Ga0079219_100803193	3300006954	Agricultural Soil	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIR
Ga0079219_103826952	3300006954	Agricultural Soil	VINVSPLWTLQCLSSGPDQMLRQLALTAKRTMTRAGGVNGGLDRSAAIRERPLQGKGKH*
Ga0066709_1022882911	3300009137	Grasslands Soil	VQAIARRGGGRVINVSPLWTLQCLSSGPDQMLRQLALTAKRTMTRAGDVNSGL
Ga0105243_104421851	3300009148	Miscanthus Rhizosphere	VQAIARRADGHVINVSPLWTLQCLSSGPNQMLRQPTLTAKRTMTRAGYVNSGLDGGAAIRERPPPCKGFPD
Ga0075423_117375302	3300009162	Populus Rhizosphere	GRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNGGLDRGAAIRERLLIARWSGILAPARH*
Ga0105249_101233843	3300009553	Switchgrass Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPLQGKGKHQECRNA*
Ga0105249_104616572	3300009553	Switchgrass Rhizosphere	VQAIARRAGGRVINASPLWTLQCLSSGPDQMLRQPELTAKRTMTRAGDV
Ga0105249_111467232	3300009553	Switchgrass Rhizosphere	GRWARVNVSPLWTLQCLSSGPDQMLRQPALTAKRTMTRAGDVNDGLDRGAAIRERLLIARWLETLAPARH*
Ga0126313_103042192	3300009840	Serpentine Soil	VINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERLLTARWLGTLAPARH*
Ga0126310_108194051	3300010044	Serpentine Soil	VQAIARRAGGRVINVSPLWTLQCLSSGPDQMLRQLALTAKRTMTRAGD
Ga0105239_103891311	3300010375	Corn Rhizosphere	HRPRARVQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNRDLDGGAAIREPAAIRK*
Ga0134123_132661211	3300010403	Terrestrial Soil	VQAIARRGDGRVINVSPLWTLQCLSSGPDPMLRQPTLTAKRTMTRASDVNDGLDRGAAIRERPPQCKEKMEDQQLGQVR
Ga0151489_14215942	3300011106	Soil	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPALTAKRTMTRAGDVNDGLDRGAAIRERLLIARWSGILAPAGH*
Ga0134038_11782891	3300012382	Grasslands Soil	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPALTAKRTMTRAGDVND
Ga0157306_100068973	3300012912	Soil	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERLLIARWSGILAPARH*
Ga0164309_116775571	3300012984	Soil	LVKYANTHRPRARVQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPLQGKGKHQECRDA*
Ga0164304_110770382	3300012986	Soil	VINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIR
Ga0157371_100954411	3300013102	Corn Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVTDGLDRGAAIRERPLQGKGKHQECRDA*
Ga0157369_103239522	3300013105	Corn Rhizosphere	VINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPLQGKGKHQECRDA*
Ga0163163_103256262	3300014325	Switchgrass Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIREQGRCD*
Ga0182000_103466552	3300014487	Soil	VQAIAQRVGGRVINVSPLWTLQCLSCGPDQMLRQLALTAKRTMTRAGDVNSGLDVSAAIRERPLQGKGKHQECRDA*
Ga0182008_104692411	3300014497	Rhizosphere	VQAIARRAGGRVINVSPLWTLQCLSSGPDQMLRQPALTAKRTMTRAGG
Ga0182008_108416162	3300014497	Rhizosphere	VQAIARRAGGHVINVSPLWTLQYLSSGPDQMLRQPALTAKRTMTRAGDVNDRA*
Ga0132256_1016371201	3300015372	Arabidopsis Rhizosphere	VQAIARRGDGRAINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIKERPPTASMCQGGG
Ga0132255_1031834581	3300015374	Arabidopsis Rhizosphere	VQAIARRADGHVINVSPLWTLQCLSSGPNQMLRQPTLTAKRTMTRAGDVNRDLD
Ga0190269_112020601	3300018465	Soil	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPALTAKRTMTRAGDVNDGLDRGAAIRERPLQGKGKRQNRRDA
Ga0190268_106594312	3300018466	Soil	VQAIARRAGGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERP
Ga0066662_126494822	3300018468	Grasslands Soil	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRDRPLQGKGKHQE
Ga0190274_102305901	3300018476	Soil	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRER
Ga0190271_137939892	3300018481	Soil	VINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDSGAAIRERSNKGWDRNSPPR
Ga0247786_10122923	3300022883	Soil	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERLLI
Ga0247754_11515141	3300023102	Soil	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPPT
Ga0247794_101119811	3300024055	Soil	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPPTAS
Ga0207682_101588631	3300025893	Miscanthus Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGL
Ga0207692_101346462	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERLLIARWSG
Ga0207680_104937432	3300025903	Switchgrass Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPLQGKGKHQECRDA
Ga0207647_106246991	3300025904	Corn Rhizosphere	VQAIARRADGHVINVSPLWTLQCLSSGPNQMLRQPTLTAKRTMTRAGDVNRDLDGGAAIRERLLIARWSEI
Ga0207705_106497872	3300025909	Corn Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERLLIARWSGTLAPARP
Ga0207654_101444821	3300025911	Corn Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIREPP
Ga0207660_109997411	3300025917	Corn Rhizosphere	VQAIARRAGGRVINVSPLWTLQCLSSGPDQMLRQPALTAKRTMTRAGDVNDGLDRGAAIRERLLIARWLE
Ga0207694_113152312	3300025924	Corn Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPAHLS
Ga0207659_102330011	3300025926	Miscanthus Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNGGLDRGAAIRERP
Ga0207687_102258552	3300025927	Miscanthus Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPPRC
Ga0207701_100903784	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VQAIARRADGHVINVSPLWTLQCLSSGPNQMLRQPTLTAKRTMTRAGDVNRDLDGGAAIRELAPL
Ga0207644_104656601	3300025931	Switchgrass Rhizosphere	VINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPPTAS
Ga0207690_109628652	3300025932	Corn Rhizosphere	VINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIREPPPP
Ga0207686_107582051	3300025934	Miscanthus Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPLQGK
Ga0207670_111226091	3300025936	Switchgrass Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPL
Ga0207704_104532441	3300025938	Miscanthus Rhizosphere	NVSPLWTLQCLSSGPDQMLRQPALTAKRTMTRAGDVNDGLDRGAAIRERLLIARWLETLAPARH
Ga0207711_103352862	3300025941	Switchgrass Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPP
Ga0207689_101496442	3300025942	Miscanthus Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERLLIARWLETLAPARH
Ga0207679_102862161	3300025945	Corn Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERLLIAR
Ga0207667_104379102	3300025949	Corn Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDV
Ga0207712_103088951	3300025961	Switchgrass Rhizosphere	VQAIARRADGHVINVSPLWTLQCLSSGPNQMLRQPTLTAKRTMTRAGDVNRDLDGGAAIREL
Ga0207712_109146032	3300025961	Switchgrass Rhizosphere	VQAIARRAGGRVINASPLWTLQCLSSGPDQMLRQPALTAKRTMTRAGDVNDGLDRGAAIRERLLIARWLETLAPARH
Ga0207668_102706961	3300025972	Switchgrass Rhizosphere	VQAIARRADGHVINVSPLWTLQCLSSGPNQMLRQPTLTAKRTMTRAGDVNRDLDGGAAIRERPR
Ga0207668_120187781	3300025972	Switchgrass Rhizosphere	VINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPLQ
Ga0207640_105088661	3300025981	Corn Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPPTASM
Ga0207703_103323822	3300026035	Switchgrass Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPPRVK
Ga0207702_122890441	3300026078	Corn Rhizosphere	VQAIARRADGHVINVSPLWTLQCLSSGPNQMLRQPTLTAKRTMTRAGDVNRDLDGGAAIREPAA
Ga0207702_124794331	3300026078	Corn Rhizosphere	VINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRSAAIRERPLQGKGKHQEC
Ga0207641_122540041	3300026088	Switchgrass Rhizosphere	VINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIREHH
Ga0207676_101993253	3300026095	Switchgrass Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPPRV
Ga0207698_101069512	3300026142	Corn Rhizosphere	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPALTAKRTMTRAGDVNDGLDRGAAIRERLLIARWLETLAPARH
Ga0207467_10127402	3300027036	Soil	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPLQ
Ga0209074_103523852	3300027787	Agricultural Soil	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPPNS
Ga0209139_103650691	3300027795	Bog Forest Soil	VINVSPLWTLQCLSSGPDQMLRQPALTAKRTMTRAGDVNGGLDGAAAI
Ga0247818_105782411	3300028589	Soil	VQAIARRADGHVINVSPLWTLQCLSSGPNQMLRQPTLTAKRTMTRAGDVNRD
Ga0247822_111790202	3300028592	Soil	VINVSPLWTLQCLSSGPDQMLRQPALTAKRTMTRAGDVNDGLDRGAAIRERLLIAR
Ga0247820_106409271	3300028597	Soil	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPALTAKRTMTRAGDVNDGLDRGAAIRERPLQGKGKHQECRDA
Ga0307306_101501621	3300028782	Soil	KLVRYANKHRPRARVQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPLQGKGKHQECRDA
Ga0307294_103212391	3300028810	Soil	VINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERLLIA
Ga0307289_100648823	3300028875	Soil	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERP
Ga0307304_102936112	3300028885	Soil	RPRARVQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPALTAKRTMTRAGDVNDGLDRGAAIRERPLQGKGKHQECRDA
Ga0268253_100494811	3300030514	Agave	VQAIARRGGGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGA
Ga0310892_103594142	3300031858	Soil	VQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERPPTASMC
Ga0310903_102780522	3300032000	Soil	VQAIARRADGHVINVSPLWTLQCLSSGPNQMLRQPTLTAKRTMTRAGDVNRDLDGGAAIR
Ga0310902_109491941	3300032012	Soil	VQAIARRADGHVINVSPLWTLQCLSSGPNQMLRQPTLTAKRTMTRAGDVNRDLDGGAAIRERPPQCKEKM
Ga0310811_106154351	3300033475	Soil	KYANTHRPRARVQAIARRGDGRVINVSPLWTLQCLSSGPDQMLRQPTLTAKRTMTRAGDVNDGLDRGAAIRERLLIARWSGILAPARH
Ga0247830_105062622	3300033551	Soil	VQAIARRADGHVINVSPLWTLQCLSSGPNQMLRQPALTAKRTMTRAGDVNRDLDGGAAIREPAAI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093828

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences