Metagenome / Metatranscriptome Family F093810

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093810
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	64 residues
Representative Sequence	MAIVWSVVGIFICGGLGGFAAWALVTSLGWVGTPGAIAAAIIGMVVAVALWTGITALLRAFGWVR
Number of Associated Samples	77
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.64 %
% of genes near scaffold ends (potentially truncated)	41.51 %
% of genes from short scaffolds (< 2000 bps)	78.30 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.283 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (46.226 % of family members)
Environment Ontology (ENVO)	Unclassified (27.358 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.623 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.14% β-sheet: 0.00% Coil/Unstructured: 40.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00155	Aminotran_1_2	29.25
PF04203	Sortase	13.21
PF03960	ArsC	3.77
PF01557	FAA_hydrolase	3.77
PF08352	oligo_HPY	1.89
PF02897	Peptidase_S9_N	0.94
PF00512	HisKA	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG3764	Sortase (surface protein transpeptidase)	Cell wall/membrane/envelope biogenesis [M]	13.21
COG1393	Arsenate reductase or related protein, glutaredoxin family	Inorganic ion transport and metabolism [P]	3.77
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.94
COG1770	Protease II	Amino acid transport and metabolism [E]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.28 %
Unclassified	root	N/A	4.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.28 %
Unclassified	root	N/A	4.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.28 %
Unclassified	root	N/A	4.72 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.04 %
Unclassified	root	N/A	4.72 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	41.51 %
Unclassified	root	N/A	4.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	34.91 %
Unclassified	root	N/A	4.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	34.91 %
Unclassified	root	N/A	4.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_107487348	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300001213\|JGIcombinedJ13530_107961867	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300005293\|Ga0065715_10026169	All Organisms → cellular organisms → Bacteria → Proteobacteria	2494	Open in IMG/M
3300005330\|Ga0070690_100356834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1063	Open in IMG/M
3300005331\|Ga0070670_100006584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	9845	Open in IMG/M
3300005347\|Ga0070668_100012714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6265	Open in IMG/M
3300005355\|Ga0070671_100142227	All Organisms → cellular organisms → Bacteria	2025	Open in IMG/M
3300005445\|Ga0070708_100000244	All Organisms → cellular organisms → Bacteria → Proteobacteria	40474	Open in IMG/M
3300006050\|Ga0075028_100318422	All Organisms → cellular organisms → Bacteria → Proteobacteria	871	Open in IMG/M
3300006606\|Ga0074062_11509692	All Organisms → cellular organisms → Bacteria → Proteobacteria	728	Open in IMG/M
3300009176\|Ga0105242_11397089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	727	Open in IMG/M
3300009553\|Ga0105249_10421573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1368	Open in IMG/M
3300009610\|Ga0105340_1115334	All Organisms → cellular organisms → Bacteria → Proteobacteria	1088	Open in IMG/M
3300011444\|Ga0137463_1022537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2265	Open in IMG/M
3300012923\|Ga0137359_10822135	All Organisms → cellular organisms → Bacteria → Proteobacteria	804	Open in IMG/M
3300013297\|Ga0157378_11367581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	750	Open in IMG/M
3300013297\|Ga0157378_11872554	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300014322\|Ga0075355_1010095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1831	Open in IMG/M
3300014323\|Ga0075356_1034702	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300018053\|Ga0184626_10371098	Not Available	578	Open in IMG/M
3300018083\|Ga0184628_10091161	All Organisms → cellular organisms → Bacteria → Proteobacteria	1562	Open in IMG/M
3300018084\|Ga0184629_10365180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	760	Open in IMG/M
3300018476\|Ga0190274_10577072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1145	Open in IMG/M
3300018481\|Ga0190271_10001657	All Organisms → cellular organisms → Bacteria → Proteobacteria	12914	Open in IMG/M
3300025315\|Ga0207697_10033551	All Organisms → cellular organisms → Bacteria	2100	Open in IMG/M
3300025461\|Ga0208851_1004664	All Organisms → cellular organisms → Bacteria → Proteobacteria	3399	Open in IMG/M
3300025931\|Ga0207644_10131046	All Organisms → cellular organisms → Bacteria → Proteobacteria	1919	Open in IMG/M
3300025960\|Ga0207651_10196900	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300026319\|Ga0209647_1034149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2937	Open in IMG/M
3300027902\|Ga0209048_10921107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	563	Open in IMG/M
3300027915\|Ga0209069_10675152	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300027915\|Ga0209069_11063523	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300028652\|Ga0302166_10124156	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300028652\|Ga0302166_10127327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	582	Open in IMG/M
3300028665\|Ga0302160_10010593	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300028665\|Ga0302160_10038707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	938	Open in IMG/M
3300028679\|Ga0302169_10009556	All Organisms → cellular organisms → Bacteria → Proteobacteria	2307	Open in IMG/M
3300028732\|Ga0302264_1039939	All Organisms → cellular organisms → Bacteria → Proteobacteria	1088	Open in IMG/M
3300028732\|Ga0302264_1075083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	796	Open in IMG/M
3300028741\|Ga0302256_10064118	All Organisms → cellular organisms → Bacteria → Proteobacteria	948	Open in IMG/M
3300028741\|Ga0302256_10226484	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300028743\|Ga0302262_10346045	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300028777\|Ga0302290_10188425	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300028777\|Ga0302290_10209742	Not Available	523	Open in IMG/M
3300028802\|Ga0307503_10502883	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300028855\|Ga0302257_1129369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	565	Open in IMG/M
3300028856\|Ga0302295_1160946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	518	Open in IMG/M
3300028861\|Ga0302259_1185837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	521	Open in IMG/M
3300028865\|Ga0302291_10165252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	750	Open in IMG/M
3300028869\|Ga0302263_10349932	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300029923\|Ga0311347_10218825	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300029980\|Ga0302298_10013372	Not Available	2182	Open in IMG/M
3300029980\|Ga0302298_10104534	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300029987\|Ga0311334_10007946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7184	Open in IMG/M
3300029989\|Ga0311365_10269323	All Organisms → cellular organisms → Bacteria → Proteobacteria	1469	Open in IMG/M
3300029989\|Ga0311365_10391316	All Organisms → cellular organisms → Bacteria → Proteobacteria	1202	Open in IMG/M
3300029989\|Ga0311365_11547691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	569	Open in IMG/M
3300029990\|Ga0311336_10708052	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300029990\|Ga0311336_10907282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	762	Open in IMG/M
3300030002\|Ga0311350_10053917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3506	Open in IMG/M
3300030002\|Ga0311350_11193139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	678	Open in IMG/M
3300030002\|Ga0311350_12005956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	509	Open in IMG/M
3300030003\|Ga0302172_10004917	All Organisms → cellular organisms → Bacteria → Proteobacteria	3851	Open in IMG/M
3300030010\|Ga0302299_10015612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4468	Open in IMG/M
3300030010\|Ga0302299_10018449	All Organisms → cellular organisms → Bacteria → Proteobacteria	4070	Open in IMG/M
3300030019\|Ga0311348_10479303	All Organisms → cellular organisms → Bacteria → Proteobacteria	929	Open in IMG/M
3300030019\|Ga0311348_10585873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	832	Open in IMG/M
3300030019\|Ga0311348_10836681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	685	Open in IMG/M
3300030047\|Ga0302286_10047407	All Organisms → cellular organisms → Bacteria → Proteobacteria	2311	Open in IMG/M
3300030047\|Ga0302286_10075027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1760	Open in IMG/M
3300030048\|Ga0302273_1010388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2930	Open in IMG/M
3300030114\|Ga0311333_10013283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5488	Open in IMG/M
3300030114\|Ga0311333_10224793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1468	Open in IMG/M
3300030114\|Ga0311333_11498221	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300030294\|Ga0311349_10970963	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300030294\|Ga0311349_11146807	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300030838\|Ga0311335_10433194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	907	Open in IMG/M
3300030838\|Ga0311335_10530992	All Organisms → cellular organisms → Bacteria → Proteobacteria	819	Open in IMG/M
3300031226\|Ga0307497_10122317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1045	Open in IMG/M
3300031232\|Ga0302323_101575459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	741	Open in IMG/M
3300031232\|Ga0302323_102944382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	543	Open in IMG/M
3300031720\|Ga0307469_10632772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	961	Open in IMG/M
3300031722\|Ga0311351_11221205	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300031726\|Ga0302321_102084095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	659	Open in IMG/M
3300031740\|Ga0307468_100257899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1232	Open in IMG/M
3300031834\|Ga0315290_10468962	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300031834\|Ga0315290_11375031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	579	Open in IMG/M
3300031873\|Ga0315297_10907264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	732	Open in IMG/M
3300031902\|Ga0302322_101791806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	752	Open in IMG/M
3300031997\|Ga0315278_11812457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	576	Open in IMG/M
3300032018\|Ga0315272_10093744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1384	Open in IMG/M
3300032143\|Ga0315292_11182783	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300032143\|Ga0315292_11259149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	607	Open in IMG/M
3300032143\|Ga0315292_11500557	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300032164\|Ga0315283_11101497	All Organisms → cellular organisms → Bacteria → Proteobacteria	835	Open in IMG/M
3300032174\|Ga0307470_11317913	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300032256\|Ga0315271_10055184	All Organisms → cellular organisms → Bacteria → Proteobacteria	2888	Open in IMG/M
3300032256\|Ga0315271_10902437	All Organisms → cellular organisms → Bacteria → Proteobacteria	762	Open in IMG/M
3300032275\|Ga0315270_10059248	All Organisms → cellular organisms → Bacteria → Proteobacteria	2167	Open in IMG/M
3300032397\|Ga0315287_10382132	All Organisms → cellular organisms → Bacteria	1667	Open in IMG/M
3300032397\|Ga0315287_10611327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1291	Open in IMG/M
3300032397\|Ga0315287_11648392	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300032516\|Ga0315273_11079851	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300034123\|Ga0370479_0137275	Not Available	666	Open in IMG/M
3300034129\|Ga0370493_0011910	Not Available	2538	Open in IMG/M
3300034417\|Ga0364941_091830	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.62%
Host-Associated	Host-Associated	10.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.15%
Aquatic	Environmental → Aquatic	25.47%
Plants	Host-Associated → Plants	10.38%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	47.17%
Freshwater	Environmental → Aquatic → Freshwater	16.04%
Soil	Environmental → Terrestrial → Soil	16.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.49%
Sediment	Environmental → Aquatic → Sediment	7.55%
Marine	Environmental → Aquatic → Marine	1.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.89%
Floodplain	Environmental → Terrestrial → Floodplain	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	47.17%
Lake	Environmental → Aquatic → Freshwater → Lake	15.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	10.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.77%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.89%
Loam	Environmental → Terrestrial → Soil → Loam	1.89%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.94%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	47.17%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	15.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.83%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.89%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.94%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	46.23%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	15.09%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.83%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.89%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.89%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.94%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.94%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.94%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300014323	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025461	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028652	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3	Environmental	Open in IMG/M
3300028665	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_3	Environmental	Open in IMG/M
3300028679	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_3	Environmental	Open in IMG/M
3300028732	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_4	Environmental	Open in IMG/M
3300028741	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_4	Environmental	Open in IMG/M
3300028743	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_4	Environmental	Open in IMG/M
3300028777	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_3	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028855	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_4	Environmental	Open in IMG/M
3300028856	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_4	Environmental	Open in IMG/M
3300028861	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_4	Environmental	Open in IMG/M
3300028865	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_4	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029980	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_3	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030003	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_3	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030047	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3	Environmental	Open in IMG/M
3300030048	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_3	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300034123	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_15	Environmental	Open in IMG/M
3300034129	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1074873481	3300001213	Wetland	ESGMAIVWSVIGIFICGGLGGFVAWAFVTAMGWVGTPGALAAAIVGMVVAVALWTGGTAMLRYLGWIR*
JGIcombinedJ13530_1079618672	3300001213	Wetland	MAIVWSIIGILVCGGLGGFAAWAFVAAMGWAGTPGAIAAAIIGMAVAVALWTGGTTLLRSVGWLR*
Ga0065715_100261692	3300005293	Miscanthus Rhizosphere	MGIVWSVIGIFICGGLGGFAAWAFVTTVGWAGTLGAIAAAIIGMVVAVALWTGLTALLRAMGLVR*
Ga0070690_1003568342	3300005330	Switchgrass Rhizosphere	TEFGMGIVWSVIGIFICGGLGGFAAWAFVTTVGWAGTLGAIAAAIIGMVVAVALWTGLTALLRAMGLVR*
Ga0070670_1000065847	3300005331	Switchgrass Rhizosphere	MGIVWSVIGIFICGGLGGFAAWAFVTTAGWTGTPGAIAAAIIGMVVAVALWTGLTALLRAMGLVR*
Ga0070668_1000127141	3300005347	Switchgrass Rhizosphere	EFGMGIVWSVIGIFICGGLGGFAAWAFVTTVGWAGTLGAIAAAIIGMVVAVALWTGLTALLRAMGLVR*
Ga0070671_1001422271	3300005355	Switchgrass Rhizosphere	MGIVWSVIGIFICGGLGGFAAWAFVTTAGWAGTPGAIAAAIIGMVVAVALWTGLTALLRAMGLVR*
Ga0070708_10000024434	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLPSPAFILQATAGVRMAIVWSVIGILICGGLGGFAAWALVTSIGWAGTLGAIVAALIGMVIAVALWAGLTALLRAAGLIR*
Ga0075028_1003184222	3300006050	Watersheds	MAIVWSVIGILVCGGLGGFAAWVLVSSMGWVGTAGALAASVIGMVVAVALWTGLTALLRAAGRIR*
Ga0074062_115096922	3300006606	Soil	MGIVWSVIGIFICGGLGGFAAWAFVTSAGWAGTLGAIAAAIIGMVVAVALWAGLTTLLRAIGLVR*
Ga0105242_113970891	3300009176	Miscanthus Rhizosphere	MGIVWSVIGIFICGGLGGFAAWAFVTTVGWAGTLGAIAAAIIGMVVAVALWTGLTA
Ga0105249_104215732	3300009553	Switchgrass Rhizosphere	MGIVWSVIGIFICGVLGGFAAWAFVTTVGWAGTLGAIAAAIIGMVVAVALWTGLTALLRAMGLVR*
Ga0105340_11153342	3300009610	Soil	MGIVWSVIGIFVCGGLGGFAAWAFVTTAGWAGTPGAIAAAIIGMVVAVALWTGLTALLRAMGLVR*
Ga0137463_10225372	3300011444	Soil	LAILWNVIGIIVCGGLGGVTAWAFVASLGLNGTPGAIAAALIGMVVAVALWAGVTSLLRMLGWIR*
Ga0137359_108221353	3300012923	Vadose Zone Soil	MAIVWSVIGIRICGGLGGFAAWALVTSIGWAGTFSAIVAARIGMVIAVALWAGLTALLRSAGLIR*
Ga0157378_113675811	3300013297	Miscanthus Rhizosphere	MGIVWSVIGIFICGGLGGFAAWAFVTTVGWAGTLGAMAAAIIGMVVAVALWTGLTALLRA
Ga0157378_118725542	3300013297	Miscanthus Rhizosphere	MGIVWSVIGIFIGGGLGGFAAWAFVTTVGWAGTLGAIAAAIIGMVVAVALWTGLTALLRAMGLVR*
Ga0075355_10100952	3300014322	Natural And Restored Wetlands	MGIVWSVIGIFICGGLGGFAAWAFVTAMGWVGTPGALAAAVIGMAVAVALWTGGTALLRGVGWIR*
Ga0075356_10347023	3300014323	Natural And Restored Wetlands	MGIFWSVIGILLCGGLGGFTAWAFVTSLGWSGTPGALVAAVVGMVVSVALWTALTALLRSLGRIR*
Ga0184626_103710982	3300018053	Groundwater Sediment	LPQRIYTTANSAEAYVAIVWSVVGILVCGGLGGFAAWVVVDSLGWVGTAGAIAAAVIGMVIAVALWAGLTSLLRAAGWVR
Ga0184628_100911612	3300018083	Groundwater Sediment	MGIVWSVIGIFICGGLGGFAAWAFVTTAGWAGTPGAIAAAIIGMVVAVALWTGLTALLRAMGLVR
Ga0184629_103651802	3300018084	Groundwater Sediment	MSIVWSVIGIFICGGLGGFAAWAFVTSAGWTGTLGAIAAAIIGMVVAVALWTGLTALLRAMGLVR
Ga0190274_105770722	3300018476	Soil	MGIVWSVIGIFICGGLGGFAAWAFVTTAGWAGTPGAIAAAVIGMVVAVALWTGLTALLRAVGLVR
Ga0190271_100016578	3300018481	Soil	MGIVWSVIGIFICGGLGGFVAWAFVTTAGWAGTPGAIAAAIIGMVVAVALWTGLTALLRAMGLVR
Ga0207697_100335512	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MGIVWSVIGIFICGGLGGFAAWAFVTTVGWAGTLGAIAAAIIGMVVAVALWTGLTALLRAMGLVR
Ga0208851_10046643	3300025461	Arctic Peat Soil	MAIVWSVVGIFICGGLGGFAAWALVTSLGWVGTPGAIAAAIIGMVVAVALWTGITALLRAFGWVR
Ga0207644_101310461	3300025931	Switchgrass Rhizosphere	TGNTREFGMGIVWSVIGIFICGGLGGFAAWAFVTTAGWAGTPGAIAAAIIGMVVAVALWTGLTALLRAMGLVR
Ga0207651_101969001	3300025960	Switchgrass Rhizosphere	TTEFGMGIVWSVIGIFICGGLGGFAAWAFVTTAGWTGTPGAIAAAIIGMVVAVALWTGLTALLRAMGLVR
Ga0209647_10341491	3300026319	Grasslands Soil	MAIVWSVIGILICGGLGGFAAWALVTSIGWAGTLSAIVAALIGMVIAVALWAGLTALLRAVGLIR
Ga0209048_109211071	3300027902	Freshwater Lake Sediment	MGIVWSVVGILICGGLGGFAAWAFVAAMGWSGTPGALVAAVVGMVVATALWTGGTALLRSLGWIR
Ga0209069_106751521	3300027915	Watersheds	MGIVWSVVGILICGGLGGFAAWAFVAAMGWSGTPGALAAAAVGMVVATALWAGGTSLLRSLGWIR
Ga0209069_110635231	3300027915	Watersheds	MAIVWSVVGILVCGGLGGLGAWALVTTLGWDGTPGALAAAVVGMVLSVALWTAITALLRAMGRVR
Ga0302166_101241562	3300028652	Fen	ICGGLGGFAAWALVTGMGWVGTPGAIAAAIIGMVVAVALWTGITTLLRALGWIRT
Ga0302166_101273272	3300028652	Fen	TREFGMGIFWSVVGILICGGLGGFAAWAFVTAMGWAGTPGALAAAVIGMVVAVALWTGGTALLRSFGWVR
Ga0302160_100105931	3300028665	Fen	RIYTTGIDRESCMAIVWSVVGIFICGGLGGFAAWALVTSLGWVGTPGAIAAAIIGMVVAVALWTGITALLRAFGWVR
Ga0302160_100387072	3300028665	Fen	MGIFWSVVGILICGGLGGFAAWAFVTAMGWAGTPGALAAAVIGMVVAVALWTGVTALMRSLGRLR
Ga0302169_100095561	3300028679	Fen	MGIFWSVVGILICGGLGGFAAWAFVTAMGWAGTPGALAAAVIGMVVAVALWTGGTALLRSFGWVR
Ga0302264_10399393	3300028732	Fen	ILICGGLGGFAAWAFVTAVGWSGTPGALAAMVIGMVVAVALWTGGTALLRALGWIR
Ga0302264_10750831	3300028732	Fen	MGIFWSVVGILICGGLGGFAAWAFVTAMGWAGTPGALAAAVIGMVVAVALWTGGTA
Ga0302256_100641182	3300028741	Fen	MAIVWSVVGIFVCGGLGGIAAWALVTSLGWSGTPGAIAAAIIGMVIAVALWTGLTTLLRALGWVR
Ga0302256_102264841	3300028741	Fen	LGIVWSVIGILICGGLGGFAAWAFVTAVGWSGTPGALAAMVIGMVVAVALWTGGTALLRALGWIR
Ga0302262_103460452	3300028743	Fen	MAIVWSVVGIFICGGLGGFAAWALVTGMGWVGTPGAIAAAIIGMVVAVALWTGITTLLR
Ga0302290_101884251	3300028777	Fen	RECGLGIVWSVIGILICGGLGGFAAWAFVTAMGWAGTPGALAAAVIGMVVAVALWTGGTALLRSFGWVR
Ga0302290_102097421	3300028777	Fen	WSVVGIFICGGLGGFAAWALVTSLGWVGTPGAIAAAIIGMVVAVALWTGITALLRAFGWV
Ga0307503_105028831	3300028802	Soil	IVGIVVCGGLGGLAAWAVVTTLGWDGTPGALAAAVLGMVLSVALWTGFTALLRAVGRIR
Ga0302257_11293692	3300028855	Fen	MAVVWSVIGIFVCGGLGGIAAWALVTSLGGAGTLGAIAAAIIGMVIAVALWTGLTAL
Ga0302295_11609461	3300028856	Fen	LICGGLGGFAAWAFVTAMGWAGTPGALAAAVIGMVVAVALWTGGTALLRSFGWVR
Ga0302259_11858372	3300028861	Fen	MAIVWSVVGILICGGLGGFAAWAFVTAMGWAGTPGALAAAVIGMAVAVALWTGGTALLRSLG
Ga0302291_101652522	3300028865	Fen	MGIVWSIIGIVVCGGLGGFAAWAFITAMGWSGTPGALAAAVVGMVVAVALWTGVTVLMRSLGRLR
Ga0302263_103499321	3300028869	Fen	MAIVWSVVGILICGGLGGFAAWAFVTAMGWAGTPGALAAAVIGMAVAVALWTGGTALLRSLGWVR
Ga0311347_102188253	3300029923	Fen	CGGLGGFAAWAFVTAMGWAGTPGALAAAVIGMVVAVALWTGGTALLRSFGWVR
Ga0302298_100133722	3300029980	Fen	LGIVWSVIGILICGGLGGFAASAFVTAVGWSGTPGALVAMVIGMVVAVALWTGGTALLRALGWIR
Ga0302298_101045341	3300029980	Fen	DRIYTTNFERGYFMAIVWSVVGIFICGGLGGFAAWALVTGMGWVGTPGAIAAAIIGMVVAVALWTGITTLLRALGWIRT
Ga0311334_100079466	3300029987	Fen	MAIVWSVVGIFICGGLGGFAAWALVRGLGWVGTPGAIAAAIIGMVVAVALWTGITTLLRALGWIRT
Ga0311365_102693234	3300029989	Fen	HTRECGLGIVWSVIGILICGGLGGFAAWAFVTAVGWSGTPGALVAMVIGMGVAVALWTGGTALLRALGWIR
Ga0311365_103913162	3300029989	Fen	MAIVWSVVGIFICGGLGGFAAWALVAGMGWVGTPGAIAAAIIGMVVAVALWTGITTLLRALGWIRT
Ga0311365_115476912	3300029989	Fen	MAIVWSVVGIFICGGLGGFAAWALVSSLGWVGTPGAIAAAIIGMVVAVALWTGITALLRAFGWVR
Ga0311336_107080522	3300029990	Fen	MGIVWSVIGIVVCGGLGGFAAWAFVTAMGWSGTPGALAAMVVGMVVAVALWTGVTALMRSLGRLR
Ga0311336_109072821	3300029990	Fen	MAIVWSVVGIFICGGLGGFAAWALVSSLGWVGTPGAIAAAIIGMVVAVALWTGTTALLRAFGWVR
Ga0311350_100539174	3300030002	Fen	LGIVWSVIGILICGGLGGFAAWAFVTAVGWPGTPGALVAMVIGMVVAVALWTGGTALLRALGWIR
Ga0311350_111931392	3300030002	Fen	MGIVWSVVGIFICGGLGGFAAWALVTGLGLTGTAGAIAAAVVGMVIAVALWTGLTSLLRTLHMIK
Ga0311350_120059562	3300030002	Fen	MAIVWSVVGILICGGLGGFAAWAFVTAMGWAGTPGALAAAVIGMAVAVALWTGGTALLR
Ga0302172_100049175	3300030003	Fen	GTREFGMGIFWSVVGILICGGLGGFAAWAFVTAMGWAGTPGALAAAVIGMAVAVALWTGGTALLRSFGWVR
Ga0302299_100156124	3300030010	Fen	MGIFWSVVGILICGGLGGFAAWAFVTAMGWAGTPGALAAAVIGMVVAVALWTGVTVLMRSLGRLR
Ga0302299_100184495	3300030010	Fen	MAIVWSVVGILICGGLGGFAAWAFVTAMGWAGTPGALAAAVIGMAVAVALWTGGTALLRSFGWVR
Ga0311348_104793032	3300030019	Fen	MAIVWSVVGIFVCGGLGGIAAWALVTSLGGAGTLGAIAAAIIGMVIAVALWTGLTALLRAMGWVR
Ga0311348_105858731	3300030019	Fen	LGIVWSVIGILICGGLGGFAAWAFVTAVGWSGTPGALAAMVIGMVVAVALWTGGTA
Ga0311348_108366811	3300030019	Fen	MGIVWSVIGIVVCGGLGGFAAWAFVTAMGWSGTPGALAAAVIGMAVAVALWTGVTALMRSLGRLR
Ga0302286_100474071	3300030047	Fen	GILICGGLGGFAAWAFVTAMGWAGTPGALAAAVIGMVVAVALWTGGTALLRSFGWVR
Ga0302286_100750272	3300030047	Fen	MGIVWSVIGIFICGGLGGFAAWAFVAAVGWSGTPGALAAAVIGMVVAAALWTGGTALLRSLGWVR
Ga0302273_10103883	3300030048	Bog	MGIVWSVIGIFICGGLGGFAAWAFVATVGWSGTPGALAAAVIGMVVAAALWTGGTALLRSLGWVR
Ga0311333_100132832	3300030114	Fen	MAIVWSVVGIFICGGLGGFAAWALVTGMGWVGTPGAIAAAIIGMVVAVALWTGITTLLRALGWIRT
Ga0311333_102247932	3300030114	Fen	MAVVWSVIGIFVCGGLGGIAAWALVTSLGGAGTLGAIAAAIIGMVIAVALWTGLTALLRAMGWVR
Ga0311333_114982212	3300030114	Fen	IVWSVVGIFVCGGLGGIAAWALVTSLGWSGTPGAIAAAIIGMVIAVALWTGLTTLLRALGWVR
Ga0311349_109709631	3300030294	Fen	IGIFVCGGLGGIAAWALVTSLGGAGTLGAIAAAIIGMVIAVALWTGLTALLRAMGWVR
Ga0311349_111468072	3300030294	Fen	MGIVWSVIGIFICGGFAAWAFVAAVGWGGTPGALAAAVIGMVVAAALWTGGTALLRSLGWVR
Ga0311335_104331942	3300030838	Fen	MAIVWSVVGIFICGGLGGFAAWALVTSLGWLGTPGAIAAAIIGMVVAVALWTGITALLRAFGWVR
Ga0311335_105309921	3300030838	Fen	VWSVIGILICGGLGGFAAWAFVTAVGWSGTPGALAAMVIGMVVAVALWTGGTALLRALGWIR
Ga0307497_101223172	3300031226	Soil	MGIVWSVIGIFICGGLGGFAAWAFVTTAGWAGTPGAIAAAIIGMVVAVALWTGLTALMRAMGLVR
Ga0302323_1015754591	3300031232	Fen	MGIVWSVVGIFICGGLGGFAAWALVTGLGLTGTASTIAAAVVGMVIAVALWTGLTS
Ga0302323_1029443821	3300031232	Fen	MAIVWSVVGILICGGLGGFAAWAFVTAMGWAGTPGALAAAVIGMVVAAALWTGGTALL
Ga0307469_106327721	3300031720	Hardwood Forest Soil	VEAGVAILWSVVGILVCGGLGGFAAWALVTGVGWVGTAGAIAAAVIGMVIAVALWAGMTSLLRAAGWIR
Ga0311351_112212052	3300031722	Fen	IGIVVCGGLGGFAAWAFITAMGWSGTPGALAAAVVGMVVAVALWTGVTVLMRSLGRLR
Ga0302321_1020840952	3300031726	Fen	MAVVWSVIGIFVCGGLGGIAAWALVTSLGGAGTLGAIAAAIIGMVIAVALWT
Ga0307468_1002578992	3300031740	Hardwood Forest Soil	VAILWSVVGILVCGGLGGFAAWALVTGVGWVGTAGAIAAAVIGMVIAVALWAGMTSLLRAAGWIR
Ga0315290_104689621	3300031834	Sediment	GIFVCGGLGGFAAWALVTSLGWVGTPGAIAAAVIGMVIAVALWTGITSLLRALGWIR
Ga0315290_113750311	3300031834	Sediment	MAIVWSIIGIFVCGGLGGFAAWTLVTSLGWTGTPGAIAAVITGMVVAVALWVGITALLRMLGWIRT
Ga0315297_109072641	3300031873	Sediment	MAIVWSVVGIFVCGGLGGFAAWALVTSVGWDGTPGAIAAAVIGMVVAVALWTGSTSLLRALGWIR
Ga0302322_1017918061	3300031902	Fen	MAIVWSVVGIFICGGLGGFAAWALVSSLGWVGTPGAIAAAIIGMVVAVALWTGITALL
Ga0315278_118124571	3300031997	Sediment	MAIVWSVVGIFICGGLGGFAAWALVTSLGWVGTPGAIAAAVIGMVVAVALWTGITSLLRA
Ga0315272_100937442	3300032018	Sediment	MGIVWSVIGIFICGGLGGFAAWAFVTAMGWSGTPGALAAAVIGMVVAVALWTGGTALLRSLGWIR
Ga0315292_111827832	3300032143	Sediment	EFCMAIVWSVIGIFVCGGLGGFAAWALVTSLGWVGTPGAIAAAVIGMVVAVALWTGITSLLRALNWIR
Ga0315292_112591491	3300032143	Sediment	MAIVWSVVGIFICGGLGGFAAWALVTSVGWDGTPGAIAAAVIGMVVAVALWTGSTSL
Ga0315292_115005572	3300032143	Sediment	AIVWSVVGIFVCGGLGGFAAWALVTSVGWDGTPGAIAAAVIGMVVAVALWTGSTSLLRALGWIR
Ga0315283_111014972	3300032164	Sediment	MAIVWSVVGIFVCGGLGGFAAWALVTSLGWVGTPGAIAAAVIGMVVAVALWTGITSLLRALGWIRT
Ga0307470_113179132	3300032174	Hardwood Forest Soil	MAIVWSVVGILFCGGLGGLAAWAMVTTLGWQGTPGAIIAVIAGMVISVALWTGLTVLLRALGWGR
Ga0315271_100551843	3300032256	Sediment	MAIVWSVIGIFVCGGLGGFAAWALVTSLGWAGTPGAIAAAIIGMVVAVALWAGLTTLLRSAGRIR
Ga0315271_109024372	3300032256	Sediment	MAIVWSVVGIFVCGGLGGFAAWALVTSVVWDGTPGAIAAAVIGMVVAVALWTGSTSLLRALGWIR
Ga0315270_100592482	3300032275	Sediment	MAIVWSVIGIFVCGGLGGFAAWALVTSLGWAGTPGAIAAAIIGMVVAVALWAGLTALLRAAGRIR
Ga0315287_103821321	3300032397	Sediment	MAIVWSVVGIFICGGLGGFAAWALVTSLGWVGTPGAIAAAVIGMVVAVALWT
Ga0315287_106113272	3300032397	Sediment	MAIVWSIIGIFVCGGLGGFAAWTLVTSLGWTGTPGAIAAVITGMVVAVALWVGITALLRMLGWIRA
Ga0315287_116483921	3300032397	Sediment	CMAIVWSVVGIFVCGGVGGFAAWALVTSLGWVGTPGAIAAAVIGMVIAVALWTGITSLLRALGWIR
Ga0315273_110798511	3300032516	Sediment	MAIVWSVVGIFICGGLGGFAAWALVTSLGWVGTPGAIAAAVIGMVVAVALWTGITSLLRALGWIRT
Ga0370479_0137275_60_257	3300034123	Untreated Peat Soil	MGIVWSVIGIFICGGIGGFAAWAFVTALGWAGIPGALVAAAIGMVVAAALWAGGTALLRFLGWVR
Ga0370493_0011910_506_703	3300034129	Untreated Peat Soil	MGIFWSVVGILICGGLGGFAAWVFVTAMGWAGTAGALAAAVIGMAVSVALWTGGTAFLRFLGWVR
Ga0364941_091830_1_189	3300034417	Sediment	VWSVIGIFICGGLGGFAAWAFVTSAGWTGTLGAIAAAIIGMVVAVALWTGLTALLRAMGLVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093810

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences