Metagenome Family F093805

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093805
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	58 residues
Representative Sequence	MVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR
Number of Associated Samples	57
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.92 %
% of genes near scaffold ends (potentially truncated)	83.96 %
% of genes from short scaffolds (< 2000 bps)	87.74 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.170 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (49.057 % of family members)
Environment Ontology (ENVO)	Unclassified (49.057 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (79.245 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.55% β-sheet: 0.00% Coil/Unstructured: 53.45%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF01656	CbiA	5.66
PF08706	D5_N	3.77
PF10604	Polyketide_cyc2	3.77
PF13495	Phage_int_SAM_4	3.77
PF00589	Phage_integrase	2.83
PF13481	AAA_25	1.89
PF05532	CsbD	1.89
PF02371	Transposase_20	1.89
PF00476	DNA_pol_A	1.89
PF07366	SnoaL	0.94
PF06772	LtrA	0.94
PF11638	DnaA_N	0.94
PF13340	DUF4096	0.94
PF13560	HTH_31	0.94
PF03288	Pox_D5	0.94
PF01850	PIN	0.94
PF01042	Ribonuc_L-PSP	0.94
PF01710	HTH_Tnp_IS630	0.94
PF12680	SnoaL_2	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	1.89
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	1.89
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.89
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.94
COG3378	DNA primase, phage- or plasmid-associated	Mobilome: prophages, transposons [X]	0.94
COG3415	CRISPR-associated protein Csa3, CARF domain	Defense mechanisms [V]	0.94
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.17 %
Unclassified	root	N/A	2.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.17 %
Unclassified	root	N/A	2.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.17 %
Unclassified	root	N/A	2.83 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	87.74 %
Unclassified	root	N/A	2.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	84.91 %
Unclassified	root	N/A	2.83 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	1.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	7.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.66 %
Unclassified	root	N/A	2.83 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	1.89 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	7.55 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.72 %
Unclassified	root	N/A	2.83 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	1.89 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	7.55 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.72 %
Unclassified	root	N/A	2.83 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	1.89 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.94 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.72 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	3.77 %
Unclassified	root	N/A	2.83 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	1.89 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	0.94 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	0.94 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.94 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.72 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	3.77 %
Unclassified	root	N/A	2.83 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	1.89 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	0.94 %
Rubrobacter indicoceani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter indicoceani	0.94 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000095\|LCrCPGB2aDRAFT_c078595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300000858\|JGI10213J12805_10251743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M
3300005562\|Ga0058697_10005327	All Organisms → cellular organisms → Bacteria	4120	Open in IMG/M
3300006624\|Ga0101567_11665716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	644	Open in IMG/M
3300007790\|Ga0105679_10556092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter indicoceani	2870	Open in IMG/M
3300009789\|Ga0126307_10050740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3238	Open in IMG/M
3300009789\|Ga0126307_10295113	Not Available	1304	Open in IMG/M
3300009789\|Ga0126307_10298955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1295	Open in IMG/M
3300009789\|Ga0126307_10961964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690	Open in IMG/M
3300009789\|Ga0126307_11181038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300009789\|Ga0126307_11468885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300009840\|Ga0126313_10148641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1768	Open in IMG/M
3300009840\|Ga0126313_10189458	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300009840\|Ga0126313_10632858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	863	Open in IMG/M
3300009840\|Ga0126313_10825237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	755	Open in IMG/M
3300009840\|Ga0126313_11008298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300009840\|Ga0126313_11235939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300009840\|Ga0126313_11394618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300009840\|Ga0126313_11643938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300010036\|Ga0126305_10015314	All Organisms → cellular organisms → Bacteria	3936	Open in IMG/M
3300010036\|Ga0126305_10589102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300010036\|Ga0126305_10998262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	574	Open in IMG/M
3300010037\|Ga0126304_10003262	All Organisms → cellular organisms → Bacteria	8153	Open in IMG/M
3300010037\|Ga0126304_10403112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	913	Open in IMG/M
3300010038\|Ga0126315_10238638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1106	Open in IMG/M
3300010038\|Ga0126315_10752207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	639	Open in IMG/M
3300010039\|Ga0126309_10182002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1151	Open in IMG/M
3300010039\|Ga0126309_10387125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	833	Open in IMG/M
3300010039\|Ga0126309_10647811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300010039\|Ga0126309_10679503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	658	Open in IMG/M
3300010039\|Ga0126309_10978195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300010039\|Ga0126309_11041710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300010040\|Ga0126308_10055398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2316	Open in IMG/M
3300010040\|Ga0126308_10103252	Not Available	1750	Open in IMG/M
3300010040\|Ga0126308_10498071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	823	Open in IMG/M
3300010040\|Ga0126308_11158476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300010041\|Ga0126312_10241706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1267	Open in IMG/M
3300010041\|Ga0126312_10327625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1083	Open in IMG/M
3300010041\|Ga0126312_10576492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	808	Open in IMG/M
3300010041\|Ga0126312_11326730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300010042\|Ga0126314_10130332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1737	Open in IMG/M
3300010042\|Ga0126314_10414413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300010042\|Ga0126314_10834170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	680	Open in IMG/M
3300010042\|Ga0126314_11295893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300010044\|Ga0126310_10249312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1197	Open in IMG/M
3300010044\|Ga0126310_10331106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	1060	Open in IMG/M
3300010044\|Ga0126310_10820577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	717	Open in IMG/M
3300010044\|Ga0126310_10821086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	717	Open in IMG/M
3300010044\|Ga0126310_10963647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	669	Open in IMG/M
3300010045\|Ga0126311_10176833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1541	Open in IMG/M
3300010045\|Ga0126311_11351433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300010045\|Ga0126311_11559907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300010045\|Ga0126311_11819254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300010166\|Ga0126306_10048533	Not Available	2931	Open in IMG/M
3300010166\|Ga0126306_10317489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1203	Open in IMG/M
3300010166\|Ga0126306_11472499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564	Open in IMG/M
3300010166\|Ga0126306_11559976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300012183\|Ga0136624_1057316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1416	Open in IMG/M
3300012187\|Ga0136622_10160807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	948	Open in IMG/M
3300012188\|Ga0136618_10015385	All Organisms → cellular organisms → Bacteria	3377	Open in IMG/M
3300012531\|Ga0136640_10000848	All Organisms → cellular organisms → Bacteria	11915	Open in IMG/M
3300012678\|Ga0136615_10360046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300012684\|Ga0136614_11068185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	554	Open in IMG/M
3300013027\|Ga0170683_10160595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300014487\|Ga0182000_10078204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1061	Open in IMG/M
3300017787\|Ga0183260_10193895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1428	Open in IMG/M
3300017787\|Ga0183260_10681758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	652	Open in IMG/M
3300017787\|Ga0183260_10919298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300017789\|Ga0136617_10008794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8993	Open in IMG/M
3300018465\|Ga0190269_10408798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300018466\|Ga0190268_11458243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	591	Open in IMG/M
3300018476\|Ga0190274_12614658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	602	Open in IMG/M
3300018719\|Ga0193596_1044828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	645	Open in IMG/M
3300018866\|Ga0193613_1044446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1038	Open in IMG/M
3300018875\|Ga0193608_1011338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1881	Open in IMG/M
3300018891\|Ga0193610_1013356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2244	Open in IMG/M
3300018914\|Ga0193594_1019492	All Organisms → cellular organisms → Bacteria	1925	Open in IMG/M
3300018917\|Ga0193611_1041936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1399	Open in IMG/M
3300018918\|Ga0193616_1102561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	803	Open in IMG/M
3300018931\|Ga0193601_1038586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	1500	Open in IMG/M
3300018933\|Ga0193614_1032880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1475	Open in IMG/M
3300018933\|Ga0193614_1044654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1253	Open in IMG/M
3300018939\|Ga0193593_1084143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	798	Open in IMG/M
3300018984\|Ga0193605_1006090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3857	Open in IMG/M
3300018984\|Ga0193605_1018580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2152	Open in IMG/M
3300018984\|Ga0193605_1063383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1132	Open in IMG/M
3300018984\|Ga0193605_1089909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	937	Open in IMG/M
3300019124\|Ga0193592_1099158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300019142\|Ga0193597_1232608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300019377\|Ga0190264_10550498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	807	Open in IMG/M
3300019377\|Ga0190264_10618189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	778	Open in IMG/M
3300019377\|Ga0190264_10618796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	778	Open in IMG/M
3300019767\|Ga0190267_11495343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520	Open in IMG/M
3300021374\|Ga0213881_10060554	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300021374\|Ga0213881_10591206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300021388\|Ga0213875_10118062	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1239	Open in IMG/M
3300027618\|Ga0208736_1144536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300027691\|Ga0209485_1323052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300030510\|Ga0268243_1066182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	803	Open in IMG/M
3300031454\|Ga0272427_1110995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	967	Open in IMG/M
3300031852\|Ga0307410_10897908	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300031903\|Ga0307407_11568065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300031995\|Ga0307409_102667031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300032126\|Ga0307415_100415153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1153	Open in IMG/M
3300032159\|Ga0268251_10241150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	726	Open in IMG/M
3300034005\|Ga0334930_092033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.40%
Host-Associated	Host-Associated	6.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.02%
Aquatic	Environmental → Aquatic	10.38%
Plants	Host-Associated → Plants	6.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.25%
Freshwater	Environmental → Aquatic → Freshwater	10.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.77%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	2.83%
Phylloplane	Host-Associated → Plants → Phylloplane	1.89%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.94%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.32%
Sand	Environmental → Terrestrial → Soil → Sand	17.92%
Ice	Environmental → Aquatic → Freshwater → Ice	10.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.77%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	2.83%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.89%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	58.49%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	17.92%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	10.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.77%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	2.83%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.94%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.94%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	49.06%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	16.98%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	9.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.89%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.89%
Polar Desert	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.94%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.94%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.94%
Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Rock	0.94%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000095	Soil microbial communities from Colorado Plateau, Green Butte sample - Light Crust, Colorado Plateau, Green Butte 2	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300006624	Soil microbial communities from the Leymus chinensis steppe, China - after adding 1.75 g N m- 2, yr-1	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012183	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ469 (22.06)	Environmental	Open in IMG/M
3300012187	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ448 (21.06)	Environmental	Open in IMG/M
3300012188	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)	Environmental	Open in IMG/M
3300012531	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ864 (21.06)	Environmental	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300013027	Gypsum rock hypoendolithic microbial communities from the Atacama Desert, Chile - Monturaqui	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018719	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018866	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 9hrs v1	Environmental	Open in IMG/M
3300018875	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018891	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018914	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 42 hrs after wetting v1	Environmental	Open in IMG/M
3300018917	Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018918	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018931	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018933	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 42 hrs v1	Environmental	Open in IMG/M
3300018939	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018984	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300019124	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300019142	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid late stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300027618	Polar desert microbial communities from Antarctic Dry Valleys - UQ255 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300031454	Rock endolithic microbial communities from Victoria Land, Antarctica - Siegfried Peak sud	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034005	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 26HNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LCrCPGB2aDRAFT_0785951	3300000095	Soil	MVPATKPVNMTFTVTAKERYLWTLELKRRGRTAVGVLRETMEGMMGEDGR*
JGI10213J12805_102517433	3300000858	Soil	KPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR*
Ga0058697_100053275	3300005562	Agave	MVPVKGGRLVAANTPVNMTFTVTAKERYEWSVELRRRGLSAVSVLRDAMNELLPEGTE*
Ga0101567_116657162	3300006624	Soil	ANTAKDAGKGKAATITGQGEAEMVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR*
Ga0105679_105560921	3300007790	Soil	AKERYLWTLELKRRGLTAVSVLRKTMQEMIGEADR*
Ga0126307_100507401	3300009789	Serpentine Soil	KARKTSGPANRSGKRKATTIAGRGQMEMVPGKNGEMVPAEKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRATMRDMMGEADR*
Ga0126307_102951134	3300009789	Serpentine Soil	EAEMVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR*
Ga0126307_102989554	3300009789	Serpentine Soil	DKPVNMTFTVTAKERYLWTLELKRRGRSAVSVLREQMYELMEEG*
Ga0126307_109619642	3300009789	Serpentine Soil	KNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR*
Ga0126307_111810382	3300009789	Serpentine Soil	RAGKASKTPDTAKDAGKGKAATIMGQGEVEMVPGKNGKMVPAQKPVNMTFTVTAKERYMWTLELKRRGLTAVSVLRETMEDMVGEADR*
Ga0126307_114688852	3300009789	Serpentine Soil	KNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRNTMQEMMGEADR*
Ga0126313_101486411	3300009840	Serpentine Soil	KNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVGVLRKTMQEMIGEADR*
Ga0126313_101894581	3300009840	Serpentine Soil	EAEMVPGKNGEMVPAQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR*
Ga0126313_106328581	3300009840	Serpentine Soil	KGKAAAITGQGEAEMVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRNTMQEMMGEADR*
Ga0126313_108252372	3300009840	Serpentine Soil	DAGKGKAAAITGQGEAEMVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR*
Ga0126313_110082982	3300009840	Serpentine Soil	VQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR*
Ga0126313_112359391	3300009840	Serpentine Soil	AITGQGEAEMVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMIGEDDR*
Ga0126313_113946181	3300009840	Serpentine Soil	QKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR*
Ga0126313_116439381	3300009840	Serpentine Soil	VPGKGGNPVSADSLVNMTFTVTAKERYLWTLELKRRGVSAVSVLRRAMNELLEGDSA*
Ga0126305_100153147	3300010036	Serpentine Soil	VNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR*
Ga0126305_105891022	3300010036	Serpentine Soil	GEAEMVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR*
Ga0126305_109982621	3300010036	Serpentine Soil	EAEMVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRNTMQEMMGEADR*
Ga0126304_100032621	3300010037	Serpentine Soil	KTAAITGQGEAEMVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMIGEDDR*
Ga0126304_104031121	3300010037	Serpentine Soil	GGTSTTGKARKTSGPANRTGKRKATAITGQGEMEMVPGKNGEMVPAEKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRETMEGMTGEADR*
Ga0126315_102386381	3300010038	Serpentine Soil	KNGEMVPAEKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRETMEGMTGEADR*
Ga0126315_107522071	3300010038	Serpentine Soil	KERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR*
Ga0126309_101820021	3300010039	Serpentine Soil	VEQGESEIVPGKGGEMVPASKPVNMTFTVTAKERYLWTLELKRRGRTAVSVLRETMEGMMGEEDGW*
Ga0126309_103871251	3300010039	Serpentine Soil	MVPADKPVNMTFTVTAKERYLWTLELKRRGRTAVSVLRDAMEGLEERQG*
Ga0126309_106478111	3300010039	Serpentine Soil	QKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEAER*
Ga0126309_106795031	3300010039	Serpentine Soil	QKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMIREVDR*
Ga0126309_109781951	3300010039	Serpentine Soil	TVPGKGGDPVSADSPVNMTFTVTAKERYLWTLELKRRGVSAVSVLRRAMNELLEGDGA*
Ga0126309_110417102	3300010039	Serpentine Soil	EMVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMEEADQ*
Ga0126308_100553984	3300010040	Serpentine Soil	EAEMVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMEEADR*
Ga0126308_101032521	3300010040	Serpentine Soil	GEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR*
Ga0126308_104980711	3300010040	Serpentine Soil	KTGKARKTSGPANRSGKRKATTIAGRGQMEMVPGKNGEMVPAEKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRATMREMMGEADR*
Ga0126308_111584761	3300010040	Serpentine Soil	ASKTPNTAKDAGKGKAAAITGQGEAEMVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR*
Ga0126312_102417062	3300010041	Serpentine Soil	MVPASKPVNMTFTVTAKERYLWTLELKRRGRTAVSVLRETMEGMMGEEDGW*
Ga0126312_103276251	3300010041	Serpentine Soil	MVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADQ*
Ga0126312_105764921	3300010041	Serpentine Soil	MVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR*
Ga0126312_113267301	3300010041	Serpentine Soil	EMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKSMQEMMGEADR*
Ga0126314_101303321	3300010042	Serpentine Soil	MVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADQ*
Ga0126314_104144131	3300010042	Serpentine Soil	MEMVPGKNGEMVPAEKPVNMTFTVTAKERYEWTLELKRRGLTAVSVLRATMREMMAEADR
Ga0126314_108341702	3300010042	Serpentine Soil	AKERYLWTLELKRRGLTAVSVLRKTMQEMMGEAER*
Ga0126314_112958931	3300010042	Serpentine Soil	PGAKTDGAKDARIVEQGESEMVPGKGGEMVPASKPVNMTFTVTAKERYLWTLELKRRGRTAVSVLRETMEGMMGEEDGW*
Ga0126310_102493121	3300010044	Serpentine Soil	QKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADQ*
Ga0126310_103311061	3300010044	Serpentine Soil	MVPVKGGRLVAANTPVNMTFTVTAKERYEWSVELRRRGLSAVSVLRD
Ga0126310_108205771	3300010044	Serpentine Soil	NMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGESDR*
Ga0126310_108210861	3300010044	Serpentine Soil	QKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMIGEADR*
Ga0126310_109636472	3300010044	Serpentine Soil	KGKAAAITGQGEAEMVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMEEADQ*
Ga0126311_101768331	3300010045	Serpentine Soil	MVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR*
Ga0126311_113514331	3300010045	Serpentine Soil	KNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMIGEADQ*
Ga0126311_115599072	3300010045	Serpentine Soil	MVPGGRDGRLIPGDSSVNMTFTVTAKERYLWTLELKRRGVSAVSVLR
Ga0126311_118192542	3300010045	Serpentine Soil	KPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADQ*
Ga0126306_100485337	3300010166	Serpentine Soil	SKTPNTAKDAGKGKAAAITGQGEAEMVPGKNGEMVPVQKSVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR*
Ga0126306_103174891	3300010166	Serpentine Soil	VPAQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRETMEDMMGEANR*
Ga0126306_114724991	3300010166	Serpentine Soil	KNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADQ*
Ga0126306_115599762	3300010166	Serpentine Soil	VPAEKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRETMEGMTGEADR*
Ga0136624_10573163	3300012183	Polar Desert Sand	MVPADKPVNMTFTVTARERYLWTLELKRRGRTAVSVLRDAMEELGERDG*
Ga0136622_101608071	3300012187	Polar Desert Sand	MVPADKPVNMTFTVTAKERYLWTLELKRRGRTAVSVLRDAMEELGERRG*
Ga0136618_100153853	3300012188	Polar Desert Sand	MVPGGKGEMVPADKPVNMTFTVTAKERYLWTLELKRRGRTAVSVLRDAMEELGERRG*
Ga0136640_100008486	3300012531	Polar Desert Sand	MVPGGRGEMVPADKPVNMTFTVTAKERYLWTLELKRRGRTAVSVLRDAMEELGERQG*
Ga0136615_103600462	3300012678	Polar Desert Sand	EGAERAEETVPGKGGKMVPAGTPVNMTFTVTAKERYLWTLDLKRRGLTAVGGLRETMEAMVGEDDR*
Ga0136614_110681852	3300012684	Polar Desert Sand	NMTFTVTARERYLWTLELRRRGRSAVSVLRERMNELMDE*
Ga0170683_101605951	3300013027	Rock	FGDEGAERSEEMVPGKGGKMVPAGTPVNMTFTVTAKERYLWTLELKRRGLTAVGFLRETMEAMVGEDDR*
Ga0182000_100782042	3300014487	Soil	KASKTPNTAEDAGKGKATAITGQGEVEMVPGKNGEMVPAQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMEESDQ*
Ga0183260_101938954	3300017787	Polar Desert Sand	TVEVEMAPGGRSGEMVPADKPVNMTFTVTAKERYLWTLELRRRGRSAVSVLRERMNELME
Ga0183260_106817582	3300017787	Polar Desert Sand	VPGGRGEMVPADKPVNMTFTVTAKERYLWTLELKRRGRTAVSVLRDAMEELGERRG
Ga0183260_109192982	3300017787	Polar Desert Sand	MVPADTQVNMTFTVTARELYLWTLELKRRGRTAVSVLRESMEQLGSRNQ
Ga0136617_100087949	3300017789	Polar Desert Sand	MVPADKPVNMTFTVTAKERYLWTLELKRRGRTAVSVLRDAMEGLEERQG
Ga0190269_104087982	3300018465	Soil	HKPVNMTYTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR
Ga0190268_114582431	3300018466	Soil	EQNKREEEVDMVPGKGGAPIPADTPVNMTFTVTAKERYLWTLELKRRGLSAISVLRRAMDELLEEERS
Ga0190274_126146581	3300018476	Soil	NMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQETMEEADQ
Ga0193596_10448281	3300018719	Soil	VEQGESEMVPGKGGKMVPATKPVNMTFTVTAKERYLWTLELKRRGRTAVGVLRETMEGMMGEDGR
Ga0193613_10444462	3300018866	Soil	KGGKMVPAGTPVNMTFTVTAKERYLWTLELKRRGLTAVGVLRETMEAMVGEDDL
Ga0193608_10113381	3300018875	Soil	AAFGDTGAERSEEMVPGKGGKMVPAGTPVNMTFTVTAKERYLWTLELKRRGLTAVGVLRETMEAMVGEDDR
Ga0193610_10133561	3300018891	Soil	KMVPAGTPVNMTFTVTAKERYLWTLELKRRGLTAVGVLRETMEAMVGEDDR
Ga0193594_10194921	3300018914	Soil	GVGDEGAERSEEMVPGKGGKMVPAGTPVNMTFTVTAKERYLWTLELKRRGLTAVGVLRETMEAMVGEDDL
Ga0193611_10419361	3300018917	Soil	GGKMVPAGTPVNMTFTVTAKERYLWTLELKRRGLTAVGVLRETMEAMVGEDDR
Ga0193616_11025612	3300018918	Soil	IDEGRGAKIVEQGESEMVPGKGGKMVPATKPVNMTFTVTAKERYLWTLELKRRGRTAVGVLRETMEGMMGEDGR
Ga0193601_10385861	3300018931	Soil	MVPGKGGKMVPAGTSVNMTFTVTAKERYLWTLELKRRGLTAVGVLRETMEAMVGEDDR
Ga0193614_10328803	3300018933	Soil	VPGKGGKMVPAGTPVNMTFTVTAKERYLWTLELKRRGLTAVGVLRETMEAMVGEDDR
Ga0193614_10446543	3300018933	Soil	FTVTAKERYLWTLELKRRGLTAVGVLRETMEAMVGEDDR
Ga0193593_10841432	3300018939	Soil	TKPVNMTFTVTAKERYLWTLELKRRGRTAVGVLRETMEGMMGEDGR
Ga0193605_10060901	3300018984	Soil	AGTSVNMTFTVTAKERYLWTLELKRRGLTAVGVLRETMEAMVGEDDR
Ga0193605_10185803	3300018984	Soil	MVPGKGGKMVPAGTPVNMTFTVTAKERYLWTLELKRRGLTAVGVLRETMEAMVGEDDR
Ga0193605_10633831	3300018984	Soil	KMVPATKPVNMTFTVTAKERYLWTLELKRRGRTAVGVLRETMEGMMGEDGR
Ga0193605_10899092	3300018984	Soil	GGKMVPAGTPVNMTFTVTAKERYLWTLELKRRGLTAVGVLRETMEAMVGEDDL
Ga0193592_10991581	3300019124	Soil	AFGDEGAEGSEEMVPGKGGKMVPAGTSVNMTFTVTAKERYLWTLELKRRGLTAVGVLRETMEAMVGEDDR
Ga0193597_12326082	3300019142	Soil	KGGKMVPAGTSVNMTFTVTAKERYLWTLELKRRGLTAVGVLRETMEAMVGEDDR
Ga0190264_105504982	3300019377	Soil	VRAAFGDEGAERSEEMVPGKGGKMVPAGTPVNMTFTVTAKERYLWTLELKRRGLTAVGVLRETMEAMVGEDDR
Ga0190264_106181891	3300019377	Soil	VPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR
Ga0190264_106187961	3300019377	Soil	VEQGESEMVPGKGGEMVPATKPVNMTFTVTAKERYLWTLELKRRGLTAVSVL
Ga0190267_114953431	3300019767	Soil	GKGKAAAITGQGEAEMVPGKNGEMVPVHKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR
Ga0213881_100605541	3300021374	Exposed Rock	VTAKERYEWSLELKRRGLTAVSVLKKAMNELLEDGKE
Ga0213881_105912062	3300021374	Exposed Rock	PDTGEVEMVPGRGGKLVPGNTPVNMTFTVTAKERYEWSIELKRRGLSAVSVLRETMNELLEDGKK
Ga0213875_101180621	3300021388	Plant Roots	MVPGRGGKLVAAKTPVNMTFTVTAKERYEWSLELKRRGLTAVSVLKKAMNELLEDGKE
Ga0208736_11445362	3300027618	Polar Desert	VEMVPGGKGEMVPADKPVNMTFTVTAKERYLWTLELKRRGRTAVSVLRDAMEELGERRG
Ga0209485_13230521	3300027691	Agricultural Soil	EMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR
Ga0268243_10661822	3300030510	Soil	PNTAKDVGKGKAAAITGQGEAEMVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMEEADQ
Ga0272427_11109951	3300031454	Rock	KPVNMTFTVTAKERYLWTLELKRRGRTAVSVLRDAMEELGERDG
Ga0307410_108979082	3300031852	Rhizosphere	GKAAAITGQGEAEMVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMEEADR
Ga0307407_115680651	3300031903	Rhizosphere	MVSGKNGEMVPVHKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQE
Ga0307409_1026670311	3300031995	Rhizosphere	GKAATIPDQDEAEMVPGKNGEMVPAQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADR
Ga0307415_1004151531	3300032126	Rhizosphere	GEAEMVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMEEADR
Ga0268251_102411502	3300032159	Agave	PNTAKDVGKGKAAAITGQGEAEMVPGKNGEMVPVQKPVNMTFTVTAKERYLWTLELKRRGLTAVSVLRKTMQEMMGEADQ
Ga0334930_092033_342_518	3300034005	Sub-Biocrust Soil	MVPGKGGKMIPAGTPVNMTFTVTAKERYLWTLELKRRGLTAVGVLRETMEAMVGEDDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F093805

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences