Metagenome Family F093786

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093786
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	73 residues
Representative Sequence	VKPTRALPAVGARARIWHFGGESEPVTIVELRDGGRAIVVASAAGERREFTLRRATAAFVARGEQHSPRLEF
Number of Associated Samples	65
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.11 %
% of genes near scaffold ends (potentially truncated)	25.47 %
% of genes from short scaffolds (< 2000 bps)	65.09 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.811 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost (12.264 % of family members)
Environment Ontology (ENVO)	Unclassified (47.170 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.887 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.00% β-sheet: 35.00% Coil/Unstructured: 62.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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SCOP family	SCOP domain	Representative PDB	TM-score
b.42.6.2: MIR domain	d3im6a_	3im6	0.65
b.42.6.2: MIR domain	d3im6a_	3im6	0.65
b.42.6.2: MIR domain	d1xzza1	1xzz	0.62
b.42.4.1: STI-like	d3bx1c_	3bx1	0.62
b.34.13.0: Chromo domain-like	d3m9qa_	3m9q	0.62
b.42.6.0: MIR domain	d3mala_	3mal	0.62
b.42.6.2: MIR domain	d1xzza1	1xzz	0.62
b.42.4.1: STI-like	d3bx1c_	3bx1	0.62
b.34.13.0: Chromo domain-like	d3m9qa_	3m9q	0.62
b.42.6.0: MIR domain	d3mala_	3mal	0.62

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF14269	Arylsulfotran_2	34.91
PF00535	Glycos_transf_2	5.66
PF00884	Sulfatase	5.66
PF13231	PMT_2	4.72
PF04138	GtrA	1.89
PF00582	Usp	0.94
PF01566	Nramp	0.94
PF00082	Peptidase_S8	0.94
PF02518	HATPase_c	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.81 %
Unclassified	root	N/A	30.19 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.81 %
Unclassified	root	N/A	30.19 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.81 %
Unclassified	root	N/A	30.19 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	63.21 %
Unclassified	root	N/A	30.19 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	60.38 %
Unclassified	root	N/A	30.19 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.19 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.38 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5.66 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.19 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.49 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5.66 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.89 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.19 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.49 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	2.83 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.89 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.19 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.49 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.83 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.89 %
Actinokineospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.19 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.49 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	1.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.89 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.94 %
Actinokineospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.19 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.49 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.89 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.94 %
Actinokineospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10025205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4104	Open in IMG/M
3300005533\|Ga0070734_10627196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300005541\|Ga0070733_10000193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	56411	Open in IMG/M
3300006059\|Ga0075017_100068902	All Organisms → cellular organisms → Bacteria	2411	Open in IMG/M
3300006059\|Ga0075017_100278566	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300006638\|Ga0075522_10024390	All Organisms → cellular organisms → Bacteria	3753	Open in IMG/M
3300006638\|Ga0075522_10067497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2012	Open in IMG/M
3300006638\|Ga0075522_10120765	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300009400\|Ga0116854_1138684	Not Available	595	Open in IMG/M
3300009665\|Ga0116135_1223308	Not Available	725	Open in IMG/M
3300009665\|Ga0116135_1487486	Not Available	510	Open in IMG/M
3300009700\|Ga0116217_10133750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1669	Open in IMG/M
3300010379\|Ga0136449_100100800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	5932	Open in IMG/M
3300010379\|Ga0136449_100128748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5052	Open in IMG/M
3300014199\|Ga0181535_10348983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	874	Open in IMG/M
3300014199\|Ga0181535_10385030	Not Available	823	Open in IMG/M
3300014200\|Ga0181526_10079262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2092	Open in IMG/M
3300014200\|Ga0181526_10243552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1147	Open in IMG/M
3300014200\|Ga0181526_10819299	Not Available	586	Open in IMG/M
3300014489\|Ga0182018_10706718	Not Available	525	Open in IMG/M
3300014493\|Ga0182016_10053618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3116	Open in IMG/M
3300014493\|Ga0182016_10253636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1100	Open in IMG/M
3300014495\|Ga0182015_10001670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	28752	Open in IMG/M
3300014495\|Ga0182015_10095487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2070	Open in IMG/M
3300014499\|Ga0182012_11020821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300014501\|Ga0182024_10004586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31640	Open in IMG/M
3300014501\|Ga0182024_10010392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18963	Open in IMG/M
3300014501\|Ga0182024_10089771	All Organisms → cellular organisms → Bacteria	4529	Open in IMG/M
3300014501\|Ga0182024_10242429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2425	Open in IMG/M
3300014501\|Ga0182024_10289290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2173	Open in IMG/M
3300014501\|Ga0182024_10348297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1937	Open in IMG/M
3300014501\|Ga0182024_10426774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1707	Open in IMG/M
3300014501\|Ga0182024_10442647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1669	Open in IMG/M
3300014501\|Ga0182024_10728545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1219	Open in IMG/M
3300014501\|Ga0182024_11064728	Not Available	958	Open in IMG/M
3300014501\|Ga0182024_12098878	Not Available	622	Open in IMG/M
3300014501\|Ga0182024_12201197	Not Available	603	Open in IMG/M
3300014657\|Ga0181522_10394549	Not Available	827	Open in IMG/M
3300014838\|Ga0182030_10054150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6306	Open in IMG/M
3300014838\|Ga0182030_10167409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2735	Open in IMG/M
3300017946\|Ga0187879_10199699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1122	Open in IMG/M
3300017948\|Ga0187847_10208422	Not Available	1065	Open in IMG/M
3300017948\|Ga0187847_10229486	Not Available	1011	Open in IMG/M
3300017948\|Ga0187847_10555077	Not Available	640	Open in IMG/M
3300018034\|Ga0187863_10120175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1470	Open in IMG/M
3300018035\|Ga0187875_10450619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300018038\|Ga0187855_10152322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1379	Open in IMG/M
3300018042\|Ga0187871_10065074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2153	Open in IMG/M
3300018043\|Ga0187887_10962430	Not Available	505	Open in IMG/M
3300018044\|Ga0187890_10138553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1398	Open in IMG/M
3300019786\|Ga0182025_1002932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1279	Open in IMG/M
3300025544\|Ga0208078_1070948	Not Available	722	Open in IMG/M
3300025574\|Ga0208717_1040557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1138	Open in IMG/M
3300025588\|Ga0208586_1028116	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1329	Open in IMG/M
3300025664\|Ga0208849_1029220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1774	Open in IMG/M
3300025703\|Ga0208357_1010833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4065	Open in IMG/M
3300025862\|Ga0209483_1245697	Not Available	693	Open in IMG/M
3300027854\|Ga0209517_10549571	Not Available	620	Open in IMG/M
3300027867\|Ga0209167_10020565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3139	Open in IMG/M
3300027905\|Ga0209415_10009975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16229	Open in IMG/M
3300027905\|Ga0209415_10012692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14000	Open in IMG/M
3300027905\|Ga0209415_10116709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2838	Open in IMG/M
3300027905\|Ga0209415_10663330	Not Available	756	Open in IMG/M
3300028562\|Ga0302151_10071294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1235	Open in IMG/M
3300028562\|Ga0302151_10114534	Not Available	941	Open in IMG/M
3300028563\|Ga0265319_1010422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3878	Open in IMG/M
3300028563\|Ga0265319_1278710	Not Available	509	Open in IMG/M
3300028573\|Ga0265334_10267756	Not Available	587	Open in IMG/M
3300028653\|Ga0265323_10236007	Not Available	571	Open in IMG/M
3300028745\|Ga0302267_10284033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	707	Open in IMG/M
3300028762\|Ga0302202_10336175	Not Available	717	Open in IMG/M
3300028783\|Ga0302279_10099811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1544	Open in IMG/M
3300028800\|Ga0265338_10510656	Not Available	845	Open in IMG/M
3300028800\|Ga0265338_10861185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora	619	Open in IMG/M
3300028813\|Ga0302157_10173443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1258	Open in IMG/M
3300028867\|Ga0302146_10371880	Not Available	547	Open in IMG/M
3300028882\|Ga0302154_10319951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	759	Open in IMG/M
3300029911\|Ga0311361_10515818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1183	Open in IMG/M
3300030020\|Ga0311344_10540640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1018	Open in IMG/M
3300030494\|Ga0310037_10419438	Not Available	552	Open in IMG/M
3300031236\|Ga0302324_100541084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1688	Open in IMG/M
3300031261\|Ga0302140_10907601	Not Available	616	Open in IMG/M
3300031344\|Ga0265316_10800987	Not Available	661	Open in IMG/M
3300031524\|Ga0302320_12142073	Not Available	519	Open in IMG/M
3300031525\|Ga0302326_11398836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	945	Open in IMG/M
3300031595\|Ga0265313_10229967	Not Available	762	Open in IMG/M
3300031670\|Ga0307374_10053709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4113	Open in IMG/M
3300031670\|Ga0307374_10068137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3418	Open in IMG/M
3300031670\|Ga0307374_10161519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1708	Open in IMG/M
3300031671\|Ga0307372_10218838	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300031671\|Ga0307372_10353525	Not Available	784	Open in IMG/M
3300031708\|Ga0310686_104205845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1964	Open in IMG/M
3300031708\|Ga0310686_104517323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1106	Open in IMG/M
3300031711\|Ga0265314_10502621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300032160\|Ga0311301_10136262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	4525	Open in IMG/M
3300032160\|Ga0311301_10160224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4023	Open in IMG/M
3300032895\|Ga0335074_10047964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	5894	Open in IMG/M
3300032895\|Ga0335074_10125813	All Organisms → cellular organisms → Bacteria	3308	Open in IMG/M
3300032895\|Ga0335074_10172946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2688	Open in IMG/M
3300032895\|Ga0335074_11443260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300033827\|Ga0334848_007168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2750	Open in IMG/M
3300033887\|Ga0334790_000817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	27845	Open in IMG/M
3300033887\|Ga0334790_001126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23019	Open in IMG/M
3300033887\|Ga0334790_007794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6082	Open in IMG/M
3300033887\|Ga0334790_166554	Not Available	652	Open in IMG/M
3300034282\|Ga0370492_0026662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2376	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.51%
Host-Associated	Host-Associated	8.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.64%
Aquatic	Environmental → Aquatic	18.87%
Plants	Host-Associated → Plants	8.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.72%
Peat	Environmental → Terrestrial → Peat	17.92%
Freshwater	Environmental → Aquatic → Freshwater	16.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.49%
Sediment	Environmental → Aquatic → Sediment	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.47%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	24.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	17.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.49%
Clay	Environmental → Terrestrial → Soil → Clay	4.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.89%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	19.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	17.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.98%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.09%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	8.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.49%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.72%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	4.72%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.89%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	12.26%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.32%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	11.32%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.43%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	8.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	8.49%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.66%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	4.72%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	4.72%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.83%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	2.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.89%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009400	Soil microbial community of the Robinson Ridge, Antarctica. Combined Assembly of Gp0139162, Gp0138857, Gp0138858	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025574	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow (SPAdes)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025703	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028563	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG	Host-Associated	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028653	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG	Host-Associated	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028867	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_3	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033827	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 5-9	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100252052	3300001356	Peatlands Soil	MAAPMRPTRALPVVGGPARIWHFSGEIEPVTIVELREQGRCVVVATLDGSRREFTLRRVSAMFIERGQQHSPRLEF*
Ga0070734_106271962	3300005533	Surface Soil	TERNRARRPQDRHACGLMWPSRAQPAVGATARVWHFGGEHEPVTIVAVRDGGRCVVVAGADGERREFTLRRATATFVAAGEQHSPRLDL*
Ga0070733_1000019353	3300005541	Surface Soil	MRPSRSLPQLAAPARVWHFSGEAEPVTIVELREEGRCVVVAAADGARREFTLRRANAFFIERGSQYWPRLEF*
Ga0075017_1000689022	3300006059	Watersheds	VRPSRPLPVPGAPARIRHFSGEAEQVTIVELRDGGRCVVVAGADGSQREFTLRRATAAFVARDEQHSPRLEF*
Ga0075017_1002785661	3300006059	Watersheds	MVVRRSGGALTAVRPTRPQPAVGASVRIWHFGGESETATIVEVRDGGRCVVVAGSSGARREFTLRRATAAFVAVGEQHSPRLELAAG*
Ga0075522_100243902	3300006638	Arctic Peat Soil	VKPSRSLPVIGAPARIWHFSGESEPVTIVELREEGRCVVVASADGSRREFTLRRVSARFIERGEQHSPRLEF*
Ga0075522_100674972	3300006638	Arctic Peat Soil	VKPTRSAPALGAPARIRHFGGGSEPVTIVELRDGGRCIVVAGADAQRREFTLRRATAVFVAVGQQHSPRLEF*
Ga0075522_101207652	3300006638	Arctic Peat Soil	VRPTRAQPRVGAAVRIWHFGGEPEPGTIVEVADGGRTVVVTDSAGVRREFTLRRATAAFVARGAQHSPRLDF*
Ga0116854_11386841	3300009400	Soil	VVLGPTKPYPRVGAQAVIAHFGGRSEPVTIVGVEDGGRRVVVSADGGERHEFTLRRATAAFVAAGEQHAPRLRLISYSAPA*
Ga0116135_12233081	3300009665	Peatland	VKPSRALPALGAPARIWHFGGESQAVTIVELRDGGRAVVVADAQGELCEFTLRRATAAFVARGKQHSPRLEF*
Ga0116135_14874862	3300009665	Peatland	VPAVGAPARIRHFGGEAEPVTIVELRDGGRAIVVAGAAGQRREFTLRRATAAFVARGEQHSPRLEF*
Ga0116217_101337503	3300009700	Peatlands Soil	MAAPMRPTRALPVVGGPARIWHFSGEIEPVTIVELREQGRCVVVAALDGSRREFTLRRVSAMFIERGQQHSPRLEF*
Ga0136449_1001008003	3300010379	Peatlands Soil	VRPSRALPAVGAPAVIWHFGGESEPVTIVELRDGGRAIVVAGAGGRRSEFTLRRATAAFVARGEQHSPRLEFRRP*
Ga0136449_1001287483	3300010379	Peatlands Soil	MRPTRPQPLVGAPARVWHFGGEREQVTIVEVRDGGRCVVVAGADGAAREFTLRRATAAFVASGEQHSPRLEL*
Ga0181535_103489832	3300014199	Bog	MRPTRALPAVGATVAIWHFGGESEPSTIVELRDDGRTLIVADAAGQRREFTLRRATAAFVARGEQHSPRLVF*
Ga0181535_103850302	3300014199	Bog	VPAVGAPARIRHFGGEAEPVTIVELRNGGRAIVGAGAAGQRREFTLRRATAAFVARGEQHSPRLEF*
Ga0181526_100792622	3300014200	Bog	MRPTRALPAVGAPVAIWHFGGESEPATIVELRDGGRTLVVAVAAGHRREFTLRRATAAFVARGQQHSPRLEF*
Ga0181526_102435521	3300014200	Bog	PTRAVPAVGAPARIRHFGGEAEPVTIVELRDGGRAIVVAGAAGQRREFTLRRATAAFVARGEQHSPRLEF*
Ga0181526_108192991	3300014200	Bog	MMPSRAQPAVGARARIWHFGGEQEAVKIVEVRDGGRCVVVAGADGAPREFTLRRATATFVASGEQHSPRLDL*
Ga0182018_107067182	3300014489	Palsa	MMPSRPLPAQGAAVRIWHFGGEAEAGAIVEVREGGRCLLVADAAGGIREFTLRRATAVFVARGERETPYLEVI*
Ga0182016_100536182	3300014493	Bog	VKPSRALPALGAPARIWHFGGESQAVTIVELRDGGRAIVVADAQGERCEFTLRRATAAFVARGKQHSPRLEF*
Ga0182016_102536362	3300014493	Bog	MKPTRAVPAVGAPARIWHFGGEAEPVTIVEVREEGRVIVIAGANGERREFTLRRATAAFVAIGEQHSPRLEF*
Ga0182015_1000167016	3300014495	Palsa	VRPTRAVPAVGAPARIRHFGGEAEPVTIVELRDGGRAIVVAGAAGQRREFTLRRATAAFVARGEQHSPRLEF*
Ga0182015_100954872	3300014495	Palsa	MKPTRALPALGAPARVWHFSGEIEPVTIVELREQGRCVVVAAADGSRREFTLRRVSAMFIERGQQHSPRLEF*
Ga0182012_110208212	3300014499	Bog	VVKPTRALPALGAAVAIWHFGGESEPATIVELRDGGRTLVVTDAAGQRREFTLRRATAAFVARGEQHSPRLEF*
Ga0182024_100045864	3300014501	Permafrost	VRPTRSAPALGAPARIRHFGGETENVTIVELRDGGRCVVVAGADAERREFTLRRATAVFVAVGQQHSPRLEF*
Ga0182024_1001039215	3300014501	Permafrost	VKPTRALPALGAPARIWHFSGEIEPVTIVELREQGRCVVVAGADGTRREFTLRRVSAMFIERGQQHSPRLEF*
Ga0182024_100897713	3300014501	Permafrost	VLGEPARIRHFGGEAENVTIVELRDGGRCVVVAGADAERREFTLRRATAVFVAVGQQHSPRLEF*
Ga0182024_102424292	3300014501	Permafrost	MKPTRALPALGAPARVWHFSGEIEPVTIVELRDQGRCVVVAAADGSRREFTLRRVSAIFIERGQQHSPRLEF*
Ga0182024_102892902	3300014501	Permafrost	MRPTRPQPLVGARAHVWHFGGEQEPVTVVEVREGGRCVVVAGADGDRREFTLRRATAAFVARDEQHSPRLEL*
Ga0182024_103482972	3300014501	Permafrost	PSRSAPALGAPAWIRHFGGETENVTIVELRDGGRCVVVAGADAERREFTLRRATAVFVAAGQQHSPRLEF*
Ga0182024_104267742	3300014501	Permafrost	VRPTRALPVVGAAARIWHFGGESETVTIVELREGGRCVVVAGADGGRQEFTLRRATAAFVARGRQHSPRLEF*
Ga0182024_104426472	3300014501	Permafrost	MRPSRSLPQIGAPARVWHFSGEAEAVTIVELREAGRCVVVAGADGARHEFTLRRANAFFIERGSQHWPRLEF*
Ga0182024_107285452	3300014501	Permafrost	VRPSRSAPALGAPARIRHFGGESEPVTIVELRDGGRCVVVAGADAERREFTLRRATAVFVAAGQQHSPRLEF*
Ga0182024_110647282	3300014501	Permafrost	MRPSRSAPALGAPARIRHFGGEAEPVTIVELRDGGRCVVVTGADAERREFTLRRATAVFVAAGQQHSPRLEF*
Ga0182024_120988782	3300014501	Permafrost	MMPSRAQPLVGAAARVRHFGGEEEQVTIVEIRDGGRCVVVAGADGARREFTLRRATAAFVASGTEHSPRLEL*
Ga0182024_122011971	3300014501	Permafrost	VRPSRSAPALGAPARIRHFGGEAEPVTIVELRDGGRCVVVTGADAERREFTLRRATAVFVAAGQQHSPRLEF*
Ga0181522_103945491	3300014657	Bog	MKPTRALPAVGASVAIWHFGGESEPSTIVELRDDGRTLIVADAAGHRREFTLRRATAAFVARGEQHSPRLVF*
Ga0182030_100541505	3300014838	Bog	VKPTRALPTLGAPVAIWHFGGESEPATIVELRDGGRALVVADAAGHRREFTLRRATAAFVARGEQHSPRLEF*
Ga0182030_101674092	3300014838	Bog	MGGLNPSRPLPQVGAPALIWHFSGESEPVAIVEIGDGGRSVTVACADGRQREFTLRRVSARFIERGQQHAPRLEF*
Ga0187879_101996991	3300017946	Peatland	ERTRRCTTSSDRVPSPSATRQPGVFARTDGAAVVKPTRALPALGAHARIWHFGGESEPVTIVELRDGGRVIVVANTRGERREFTLRRATAAFVARGEQHSPRLEF
Ga0187847_102084222	3300017948	Peatland	VLARTDGAAVVKPTRGLPALGARARIWHFGGESEPVTIVELRDGGRVIVVAGARGERREFTLRRATAAFVARGEQHSPRLEF
Ga0187847_102294862	3300017948	Peatland	VKPSRALPALGAPARIWHFGGESQAVTIVELRDGGRAVVVADAQGELCEFTLRRATAAFVARGKQHSPRLEF
Ga0187847_105550772	3300017948	Peatland	VRPTRAVPAVGAPARIRHFGGEAEPVTIVELRDGGRAIVVAGAAGQRREFTLRRATAAFVARGEQHSPRLEF
Ga0187863_101201752	3300018034	Peatland	VKPTRALPALGAHARIWHFGGESEPVTIVELRDGGRAIVVATAAGERREFTLRRATAAFVARGEQHSPRLEF
Ga0187875_104506192	3300018035	Peatland	FARTDGAAVVKPTRALPALGAHARIWHFGGESEPVTIVELRDGGRVIVVANTRGERREFTLRRATAAFVARGEQHSPRLEF
Ga0187855_101523222	3300018038	Peatland	VLARTDGAAVVKPTRGLPALGARARIWHFGGESEPVTIVELRDSGRVIVVANTRGERREFTLRRATAAFVARGEQHSPRLEF
Ga0187871_100650742	3300018042	Peatland	ATRQPGVLARTDGAAVVKPTRGLPALGARARIWHFGGESEPVTIVELRDGGRVIVVAGARGERREFTLRRATAAFVARGEQHSPRLEF
Ga0187887_109624302	3300018043	Peatland	VPSPSATRQPGVFARTDGAAVVKPTRALPALGAHARIWHFGGESEPVTIVELRDGGRVIVVANTRGERREFTLRRATAAFVARGEQHSPRLEF
Ga0187890_101385532	3300018044	Peatland	VFARTDGAAVVKPTRALPALGAHARIWHFGGESEPVTIVELRDGGRVIVVANTRGERREFTLRRATAAFVARGEQHSPRLEF
Ga0182025_10029322	3300019786	Permafrost	VRPTRSAPALGAPARIRHFGGETENVTIVELRDGGRCVVVAGADAERREFTLRRATAVFVAVGQQHSPRLEF
Ga0208078_10709481	3300025544	Arctic Peat Soil	VRPTRSAPALGAPARIRHFGGESETVTIVEVRDGGRCVVVAGADAQRREFTLRRGTAVFVAVGQQHSPRLEF
Ga0208717_10405572	3300025574	Arctic Peat Soil	MRPSRSLPQLAAPARVWHFSGEAEPVTIVELREEGRCIVVAGADGARREFTLRRANAFFIERGSQHWPRLEF
Ga0208586_10281162	3300025588	Arctic Peat Soil	VRPSRSAPALGAPARIRHFGGEAEPVTIVELRDGGRCVVVSGADAERREFTLRRATAVFVAAGQQHSPRLEF
Ga0208849_10292202	3300025664	Arctic Peat Soil	VKPSRSLPVIGAPARIWHFSGESEPVTIVELREEGRCVVVASADGSRREFTLRRVSARFIERGEQHSPRLEF
Ga0208357_10108333	3300025703	Arctic Peat Soil	VKPTRSAPALGAPARIRHFGGGSEPVTIVELRDGGRCIVVAGADAQRREFTLRRATAVFVAVGQQHSPRLEF
Ga0209483_12456972	3300025862	Arctic Peat Soil	VRPTRAQPRVGAAVRIWHFGGEAESGTIVEVADGGRTVVVTDSAGVRREFTLRRATAAFVARGAQHSPRLDL
Ga0209517_105495712	3300027854	Peatlands Soil	MAAPMRPTRALPVVGGPARIWHFSGEIEPVTIVELREQGRCVVVAALDGSRREFTLRRVSAMFIERGQQHSP
Ga0209167_100205652	3300027867	Surface Soil	MRPSRSLPQLAAPARVWHFSGEAEPVTIVELREEGRCVVVAAADGARREFTLRRANAFFIERGSQYWPRLEF
Ga0209415_1000997511	3300027905	Peatlands Soil	VRPTRSAPALGAPARIRHFGGETDNVTIVELRDGGRCVVVAGADAERHEFTLRRATAVFVAVGQQHSPRLEF
Ga0209415_100126928	3300027905	Peatlands Soil	MAAPMRPTRALPVVGGPARIWHFSGEIEPVTIVELREQGRCVVVAALDGSRREFTLRRVSAMFIERGQQHSPRLEF
Ga0209415_101167092	3300027905	Peatlands Soil	VPAVGATAHIRHFSGEAEPVRIVELREDGRCVVVEDSKGARREFTLRRANARFIERDEQHSPRLEF
Ga0209415_106633301	3300027905	Peatlands Soil	VRPSRALPAVGAPAVIWHFGGESEPVTIVELRDGGRAIVVAGAGGRRSEFTLRRATAAFVARGEQHSPRLEFRRP
Ga0302151_100712942	3300028562	Bog	VKPSRALPALGAPARIWHFGGESQAVTIVELRDGGRAIVVADAQGERCEFTLRRATAAFVARGKQHSPRLEF
Ga0302151_101145342	3300028562	Bog	VKPTRALPALGAAVAIWHFGGESEPATIVELRDGGRTLVVTDAAGQRREFTLRRATAAFVARGEQHSPRLEF
Ga0265319_10104223	3300028563	Rhizosphere	VRPSRALPVVGATASIRHFGGDAEAVTIVEVREGGRAIVVAAAGGERREFTLRRATAVFVERGRQHSPRLDVQQGG
Ga0265319_12787102	3300028563	Rhizosphere	VKPTRALPAVGATAHIWHFSGEIEPVTIVELREQGRCVVVSGVDGSRREFTLRRVSAMFIERGQQHSPRLEF
Ga0265334_102677561	3300028573	Rhizosphere	VGGLRPSRPLPVVGAAARIWHFSGESEPVTIVEVHDDGRTVAVVSADGSRREFTLRRVSARFIQRGEQHSPRLEF
Ga0265323_102360071	3300028653	Rhizosphere	VKPTRALPAVGATAHIWHFSGEIEPVTIVELREQGRCVVVSGVDGSRREFTLRRVSAMFIER
Ga0302267_102840332	3300028745	Bog	ERAVKPSRALPALGAPARIWHFGGESQAVTIVELRDGGRAVVVADAQGELCEFTLRRATAAFVARGKQHSPRLEF
Ga0302202_103361752	3300028762	Bog	VRPTRALPTLGAPVAIWHFGGESEPATIVELRDGGRALVVADAAGHRREFTLRRATAAFVARGEQHSPRLEF
Ga0302279_100998112	3300028783	Bog	VRPTRALPTLGAPVAIWHFGGESEPATIVELRDGGRALVVADAAGHRREFTLRRATAAFVARGEQHSPRL
Ga0265338_105106562	3300028800	Rhizosphere	VGGLRPSRPLPVVGAAALIWHFSGESEPVTIVAVDDDGRTVAVVSADGSRREFTLRRVSARFIERGQQHAPRLEF
Ga0265338_108611851	3300028800	Rhizosphere	PGRAPRRPPSAQPVGGDRVGGLRPSRSLPEVGAAARIWHFSGESEPVTIVAVDDDGRTVTVVSADGTRLEFTLRRVSARFIERGEQHSPRLEF
Ga0302157_101734431	3300028813	Bog	PALGAAVAIWHFGGESEPATIVELRDGGRTLVVTDAAGQRREFTLRRATAAFVARGEQHSPRLEF
Ga0302146_103718802	3300028867	Bog	PRARGAPAGRERRPLVRAMRPTRALPVVGAAVTIWHFGGEGEPARIVEVRDSRRAVVVIGADGERREFSLRRATAAFVARGEQHSPRLEF
Ga0302154_103199511	3300028882	Bog	RGGAVKPSRALPALGAPARIWHFGGESQAVTIVELRDGGRAIVVADAQGERCEFTLRRATAAFVARGKQHSPRLEF
Ga0311361_105158181	3300029911	Bog	LGAPARIWHFGGESQAVTIVELRDGGRAIVVADAQGERCEFTLRRATAAFVARGKQHSPRLEF
Ga0311344_105406401	3300030020	Bog	RWRRARRGGAVKPSRALPALGAPARIWHFGGESQAVTIVELRDGGRAIVVADAQGERCEFTLRRATAAFVARGKQHSPRLEF
Ga0310037_104194382	3300030494	Peatlands Soil	MAAPMRPTRALPVVGGPARIWHFSGEIEPVTIVELREQGRCVVVATLDGSRREFTLRRVSAMFIERGQQHSPRLEF
Ga0302324_1005410842	3300031236	Palsa	PAVGAPARIRHFGGEAEPVTIVELRDGGRAIVVAGAAGQRREFTLRRATAAFVARGEQHSPRLEF
Ga0302140_109076011	3300031261	Bog	VKPTRALPALGAAVAIWHFGGESEPATIVELRDGGRTLVVTDAAGQRREFTLRRATAAFVARGEQ
Ga0265316_108009872	3300031344	Rhizosphere	VRPSRALPVVGATASIRHFGGDAEAVTIVEVREGGRAIVVAAAGGERREFTLRRATAVF
Ga0302320_121420731	3300031524	Bog	VKPTRALPAVGARVAIWHFGGESEPATIVELRDGGRTLVVAVAGGQRREFTLRRATAAFVARGEQHSPRLEF
Ga0302326_113988362	3300031525	Palsa	PTRAVPAVGAPARIRHFGGEAEPVTIVELRDGGRAIVVAGAAGQRREFTLRRATAAFVARGEQHSPRLEF
Ga0265313_102299671	3300031595	Rhizosphere	VRPSRALPAVGATASIRHFGGDAEAVTIVDLRDGGRVIVVAVAGGDRREFTLRRATAAFV
Ga0307374_100537093	3300031670	Soil	VRPTRSAPALGAPARIRHFGGESEPVTIVELRDGGRCIVVAGADAQRREFTLRRATAVFVAVGQQHSPRLEF
Ga0307374_100681372	3300031670	Soil	VGARATVWHFGGESEPVTVVEVRDGGRCVIVAAAGGEDRREFTLRRATAVFVEHGAQHSPRLELDGA
Ga0307374_101615192	3300031670	Soil	PLVGAAATVWHFGGEREAVTIVEVRDGGRCVVVAAVDGRRREFTLRRATAAFVASGEQHSPRLEL
Ga0307372_102188382	3300031671	Soil	VRPTRAQPLVGAAATVSHFGGEREAVTIVEVRDGGRCVVVAAVDGRRREFTLRRATAAFVASGEQHSPRLEL
Ga0307372_103535252	3300031671	Soil	VRPTRALPAVGAPARIWHFSGEIEPVTIVELREQGRCVVVAAADGTRREFTLRRVSAMFIERGQQHSPRLEF
Ga0310686_1042058452	3300031708	Soil	MGGLKPSRPLPQVGAPARIWHFSGESEPVTIVELREQGRSVVVACADGSSREFTLRRVSARFIERGQQHSPRLEF
Ga0310686_1045173232	3300031708	Soil	MMPSRPLPARGAAVRIWHFGGEAEAGTIVEVRDGGRCLLVAGASGTTREFTLRRATAVFVARGERETPYLEVV
Ga0265314_105026211	3300031711	Rhizosphere	ATASIRHFGGDAEAVTIVDLRDGGRVIVVAVAGGDRREFTLRRATAAFVERGRQHSPRLE
Ga0311301_101362622	3300032160	Peatlands Soil	VRPSRALPAVGAPAVSWHFGGESEPVTIVELRDGGRAIVVAGAGGRRSEFTLRRATAAFVARGEQHSPRLEFRRP
Ga0311301_101602243	3300032160	Peatlands Soil	MRPTRPQPLVGAPARVWHFGGEREQVTIVEVRDGGRCVVVAGADGAAREFTLRRATAAFVASGEQHSPRLEL
Ga0335074_100479642	3300032895	Soil	MMPSRPLPTRGGRVRIWHFGGEAQAGTILEVRDGGRSLLVAAASGETLEFTLRRVSASFVARGERETPYLELR
Ga0335074_101258134	3300032895	Soil	MMPSRPLPAPGAPVRIWHFGGEAEAGTIVEVRDGGRSLLVAGAAGRTREFTLRRATAVFVARG
Ga0335074_101729462	3300032895	Soil	MRPSRALPQIGAPARIRLFSGESESVTIVELREQGRCVVVAGPDGARREFTLRRANAFFIERGCQHSPRLEF
Ga0335074_114432601	3300032895	Soil	VRPSRALPALGAAARIRHLSGETEPVTIVELREQGRIVVVAGADGIRREFTLRRASAVFMESGERQSPRLEF
Ga0334848_007168_2153_2371	3300033827	Soil	VRPTRSLPALGAPARIWHFGGESEPATIVELRDGGRAIVVADASAERREFTLRRATAAFVARGKQHSPRLEF
Ga0334790_000817_25590_25808	3300033887	Soil	VKPTRALPAVGARARIWHFGGESEPVTIVELRDGGRAIVVASAAGERREFTLRRATAAFVARGEQHSPRLEF
Ga0334790_001126_2825_3043	3300033887	Soil	MKPSRALPQIGAPARIRLFSGESESVTIVELREQGRCIVVATAEGARREFTLRRANAFFIERGCQHSPRLEF
Ga0334790_007794_858_1085	3300033887	Soil	MGGLKPSRPLPELGAPACIWHFSGESEPVSIVELREQGRSVVVARADGSRREFTLRRVSARFIERGQQHSPRLEF
Ga0334790_166554_1_219	3300033887	Soil	VRPTRSLPAVGAPAQIWYFGGESEPATIVALRDGGRAIVVATAGGEHREFTLRRATAAFVARGEQHSPRLEF
Ga0370492_0026662_493_711	3300034282	Untreated Peat Soil	MKPTRAVPAVGAPARIWHFGGEAEPVTIVEVREEGRVIVIAGANGERREFTLRRATAAFVAIGEQHSPRLEF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F093786

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences