NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F093735

Metagenome / Metatranscriptome Family F093735

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F093735
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 46 residues
Representative Sequence PLSHWRTYKPKEIFTQHDAWDLFFNMMEAGYVPFPGTALPQLKSAIKK
Number of Associated Samples 80
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 50.94 %
% of genes from short scaffolds (< 2000 bps) 47.17 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (63.208 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(28.302 % of family members)
Environment Ontology (ENVO) Unclassified
(41.509 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(43.396 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 27.63%    β-sheet: 0.00%    Coil/Unstructured: 72.37%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF13392HNH_3 1.89
PF00210Ferritin 0.94
PF136402OG-FeII_Oxy_3 0.94



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A63.21 %
All OrganismsrootAll Organisms36.79 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000124|BS_KBA_SWE12_21mDRAFT_c10079263All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium827Open in IMG/M
3300000241|BS_KBA_SWE21_205mDRAFT_10096062All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium641Open in IMG/M
3300001213|JGIcombinedJ13530_108178040All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium1184Open in IMG/M
3300006025|Ga0075474_10095524All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium964Open in IMG/M
3300006026|Ga0075478_10156698Not Available708Open in IMG/M
3300006027|Ga0075462_10083365Not Available1001Open in IMG/M
3300006734|Ga0098073_1045346All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium594Open in IMG/M
3300006734|Ga0098073_1046805All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium582Open in IMG/M
3300006734|Ga0098073_1050566Not Available555Open in IMG/M
3300006734|Ga0098073_1055197All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium526Open in IMG/M
3300006802|Ga0070749_10505243All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium658Open in IMG/M
3300006810|Ga0070754_10349906Not Available654Open in IMG/M
3300007214|Ga0103959_1187602All Organisms → Viruses → Predicted Viral1355Open in IMG/M
3300007345|Ga0070752_1399999Not Available507Open in IMG/M
3300007346|Ga0070753_1353816All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium517Open in IMG/M
3300007539|Ga0099849_1058597All Organisms → Viruses → Predicted Viral1588Open in IMG/M
3300007539|Ga0099849_1289750All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium593Open in IMG/M
3300007541|Ga0099848_1067941All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium1407Open in IMG/M
3300007541|Ga0099848_1189630All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium742Open in IMG/M
3300007542|Ga0099846_1093184All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium1113Open in IMG/M
3300008110|Ga0114343_1132926All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium817Open in IMG/M
3300009081|Ga0105098_10262464All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium818Open in IMG/M
3300009170|Ga0105096_10101640Not Available1434Open in IMG/M
3300010296|Ga0129348_1022893All Organisms → Viruses → Predicted Viral2278Open in IMG/M
3300010296|Ga0129348_1163049All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium768Open in IMG/M
3300010297|Ga0129345_1045424All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium1689Open in IMG/M
3300010300|Ga0129351_1213292All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium746Open in IMG/M
3300010370|Ga0129336_10322866All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium854Open in IMG/M
3300017747|Ga0181352_1043716All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium1320Open in IMG/M
3300017766|Ga0181343_1005863All Organisms → cellular organisms → Bacteria4199Open in IMG/M
3300017780|Ga0181346_1166238All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium816Open in IMG/M
3300017785|Ga0181355_1064046All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium1549Open in IMG/M
3300019724|Ga0194003_1000591Not Available2328Open in IMG/M
3300020183|Ga0194115_10029390All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium3938Open in IMG/M
3300020566|Ga0208222_1033088All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium960Open in IMG/M
3300021963|Ga0222712_10401652Not Available833Open in IMG/M
3300021964|Ga0222719_10260355All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium1147Open in IMG/M
3300022071|Ga0212028_1039913Not Available869Open in IMG/M
3300022176|Ga0212031_1021502All Organisms → Viruses → Predicted Viral1007Open in IMG/M
3300022187|Ga0196899_1138455All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium686Open in IMG/M
3300022198|Ga0196905_1072892All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium944Open in IMG/M
3300022200|Ga0196901_1171870All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium710Open in IMG/M
3300025646|Ga0208161_1078202All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium965Open in IMG/M
3300025653|Ga0208428_1142408Not Available647Open in IMG/M
3300025674|Ga0208162_1121770All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium748Open in IMG/M
3300025889|Ga0208644_1132712All Organisms → Viruses → Predicted Viral1170Open in IMG/M
3300027693|Ga0209704_1085837All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium887Open in IMG/M
3300027721|Ga0209492_1167846All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium762Open in IMG/M
3300027762|Ga0209288_10020407All Organisms → Viruses → Predicted Viral1899Open in IMG/M
3300027816|Ga0209990_10102325Not Available1389Open in IMG/M
3300031566|Ga0307378_10212136Not Available1893Open in IMG/M
3300031772|Ga0315288_10267428Not Available1807Open in IMG/M
3300031857|Ga0315909_10793963Not Available599Open in IMG/M
3300034375|Ga0348336_134466Not Available764Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous28.30%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake20.75%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient10.38%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment5.66%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater4.72%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake4.72%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater3.77%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine3.77%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.83%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil2.83%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton1.89%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.89%
MarineEnvironmental → Aquatic → Marine → Wetlands → Sediment → Marine1.89%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.89%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.94%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater0.94%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.94%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.94%
Fracking WaterEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water0.94%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000124Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBA sample SWE 12_21mEnvironmentalOpen in IMG/M
3300000241Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBB sample SWE 21_20.5mEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006734Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300007214Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Surface layer) 9 sequencing projectsEnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300008110Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NAEnvironmentalOpen in IMG/M
3300008261Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NAEnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009082Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009170Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300012719Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES123 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012963Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017784Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300019724Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_9-10_MGEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020183Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surfaceEnvironmentalOpen in IMG/M
3300020190Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015013 Mahale N5 surfaceEnvironmentalOpen in IMG/M
3300020222Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015034 Kigoma Deep Cast 250mEnvironmentalOpen in IMG/M
3300020566Freshwater microbial communities from Lake Mendota, WI - 13SEP2009 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022071Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)EnvironmentalOpen in IMG/M
3300022176Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027693Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027697Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)EnvironmentalOpen in IMG/M
3300027721Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027732Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027762Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027816Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027973Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300031566Soil microbial communities from Risofladan, Vaasa, Finland - UN-1EnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031772Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20EnvironmentalOpen in IMG/M
3300031784Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300034073Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XLEnvironmentalOpen in IMG/M
3300034102Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112EnvironmentalOpen in IMG/M
3300034103Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119EnvironmentalOpen in IMG/M
3300034280Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048EnvironmentalOpen in IMG/M
3300034283Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
BS_KBA_SWE12_21mDRAFT_1007926313300000124MarinePLSHWRTYKPKEIFTQHDAWDLFFNMMEAGYVPFPGTALPQLKSAIKKQ*
BS_KBA_SWE21_205mDRAFT_1009606213300000241MarineTYKPKEIFTQHDAWDLFFNMMEAGYVPFPGTALPQLKSAIKKQ*
JGIcombinedJ13530_10817804063300001213WetlandIFTQHDAWDLFFNMMEAGYAPFPGTSLPQLKSAIKK*
Ga0075474_1009552433300006025AqueousSHWRTYKYKEVFTQHDAWDLFFNMMDVGYVPFPGTALPQLKSAIKKS*
Ga0075478_1015669813300006026AqueousKPDEHFTQNHAWDLFFNMMEAGYVPFPGRSLPQLQSVVKKQ*
Ga0075462_1008336543300006027AqueousSHWRNYKTDQHFTQNHAWDLFFNMMEAGYVPFPGRSLPQLQSVVKKQ*
Ga0098073_104534613300006734MarineLLHTKSGAQAPLSHWRTYKPSEVFTQHHAWDLFFNMMGAGYTPFPGTSLPQLKNAFKK*
Ga0098073_104680523300006734MarineVLLYTNNGAQAPLSHWRYYKPKEVFTQHHAWDLFFNMMEAGYVPFPGVSLPQLKSAIKK*
Ga0098073_105056613300006734MarineTHWRTYKSKEVFTQHDAWDLFFNMMEAGYVPFPGTALPQLHSAVKK*
Ga0098073_105519723300006734MarineGAQAPLSHWRTYKPNEVFTQHHAWDLFFNMMEASYVPFPGISLPQLKSAIKK*
Ga0070749_1050524343300006802AqueousLLYTNSGAQAPLTHWRTYKPKEVFTQHDAWDLFFNMMEAGYVPFPGTSLPQLKSALKKQ*
Ga0070749_1055863123300006802AqueousYGAQAPLTHWRSYMPKEVFTQNHAWDLFFNMMAAGYVPFPGVSLPQLKSAVKK*
Ga0070754_1034990613300006810AqueousEVFTQHDAWDLFFNMMDVGYVPFPGTALPQLKSAIKKS*
Ga0075477_1028694633300006869AqueousTQNHAWDLFFNMMEAGYVPFPGRSLPQLQSVVKKQ*
Ga0070750_1011879843300006916AqueousQYKPKEIFTQDDAWTLFDAMMDAGFVPFPAVALPQLSQAFRKPNHDQKPE*
Ga0103959_118760213300007214Freshwater LakeYTNSGAQAPLTHWRTYKPKEVFTQHDAWDLFFNMMEAGYVPFPGTSLPQLKSALKKQ*
Ga0070752_139999913300007345AqueousQHDAWDLFFNMMDVGYVPFPGTALPQLKSAIKKS*
Ga0070753_135381623300007346AqueousPLSHWRYYKPKEVFTQHHAWDLFFNMMEASYVPFPGISLPQLKSAIKK*
Ga0099851_134942813300007538AqueousFTQHHAWDLFFNMMEAGYVPFPGTSLPQLKSAIKK*
Ga0099849_105859753300007539AqueousKPKEVFTQSHAWDLFFNMMEAGYTPFPGTSLPQLKNAFKK*
Ga0099849_128975013300007539AqueousKEVFTQHHAWDLFFNMMEAGYVPFPGISLPQLKAAVKNDR*
Ga0099848_106794153300007541AqueousLYTNNGAQAPLTHWRTYKNNEVFTQHHAWDLFFNMMEAGYVPFPGTSLPQLKSAVKKS*
Ga0099848_118963013300007541AqueousEVFTQHHAWDLFFNMMDASYVPFPGIALPQLKSALKK*
Ga0099846_109318443300007542AqueousVLLHTKYGAQAPLTHWRSYMPKEVFTQNHAWDLFFNMMEAGYVPFPGISLPQLKAAVKNDR*
Ga0099850_115213943300007960AqueousSHWRTYKPQEVFTQNHAWDLFFNMMEAGYVPFPGIALPQLKSAIKK*
Ga0114343_113292643300008110Freshwater, PlanktonQHDAWDLFFNMMEAGYVPFPGTALPQLKSAVKKQ*
Ga0114336_123827913300008261Freshwater, PlanktonKEVFTQHDAWDLFFNMMEAGYTPFPGTSLPQLKAAIKKQ*
Ga0105098_1026246413300009081Freshwater SedimentSGAQAPLSHWRTYKPKEIFTQHDAWDLFFNMMEAGYVPFPGTALPQLKSAIKK*
Ga0105099_1050408933300009082Freshwater SedimentGAQAPLSHWRTYKPKEIFTQHDAWDLFFNMMEAGYVPFPGTALPQLKSAIKKQ*
Ga0105096_1010164053300009170Freshwater SedimentPLTHWRTYKPKEVFTQEHAWDLFFNMMEAGYVPFPGTALPQLQSAIKKK*
Ga0129348_102289313300010296Freshwater To Marine Saline GradientTQHHAWDLFFNMMEASYVPFPGISLPQLKSAIKK*
Ga0129348_116304943300010296Freshwater To Marine Saline GradientFTQHHAWDLFFNMMEAGYVPFPGISLPQLKSAIKK*
Ga0129345_104542413300010297Freshwater To Marine Saline GradientPLSHWRYYKPKEVFTQHHAWDLFFNMMEAGYVPFPGISLPQLKSAIKK*
Ga0129351_116713343300010300Freshwater To Marine Saline GradientVLLHTKYGAQAPLTHWRSYMPKEVFTQNHAWDLFFNMMAAGYVPFPGVSLPQLKSAVKK*
Ga0129351_121329213300010300Freshwater To Marine Saline GradientNGAQAPLSHWRYYKPKEVFTQHHAWDLFFNMMEAGYVPFPGISLPQLKSAIKK*
Ga0129333_1069352933300010354Freshwater To Marine Saline GradientLLHTKSGAQAPLSHWRTYKPQEVLTQNDAWDLFFNMMEAGYIPFPGTSLPQLKEAVKKS*
Ga0129333_1090479033300010354Freshwater To Marine Saline GradientYTNSGAQAPLSHWRTYKPKEIFTQHDAWDLFFNMMEAGYVPFPGTALPQLKSAIKKQ*
Ga0129333_1108531613300010354Freshwater To Marine Saline GradientREVFTQHDAWDLFFNMMEAGYVPFPGTSLPQLKSALKKQ*
Ga0129336_1032286613300010370Freshwater To Marine Saline GradientYKPKEIFTQHDAWDLFFNMMEAGYVPFPGTALPQLKSAVKRQ*
Ga0129336_1054730513300010370Freshwater To Marine Saline GradientTHWRTYKPKETFNQRDAWDLFFNMLEAGYVPFPGIALPQLQAAVKKS*
Ga0129336_1057160443300010370Freshwater To Marine Saline GradientTQHDAWDLFFNMMEAGYVPFPGTSLPQLKSALKKQ*
Ga0157600_121602113300012719FreshwaterHTKSGAQAPLSHWRTYKPQEVLTQNDAWDLFFNMMEAGYIPFPGTSLPQLKEAVKKS*
Ga0129340_105413233300012963AqueousGSMAPISHWRTYKPKEVFTQEHAWDLFFNMLEAGYVPFPLTSLPQLSTVLKKK*
Ga0177922_1013202913300013372FreshwaterLTHWRSYKPRTVFTQHNAWDLFDSMMDAGYVPFPGTALPQLASAIKKK*
Ga0177922_1111376813300013372FreshwaterTQHNAWDLFDSMMDAGYVPFPGTALPQLASAIKKK*
Ga0181352_104371613300017747Freshwater LakeHWRTYKPKEIFTQHDAWDLFFNMMDASYVPFPGTALPQLKSALKKQ
Ga0181352_106892853300017747Freshwater LakeSHWRTYKPNEILTQHDAWDLFFNMMEAGYNPFPGTSLPQLKEAVKKS
Ga0181352_106961353300017747Freshwater LakeSHWRTYKPNEILTQHDAWDLFFNMMEAGYNPFPGTSLPQLKEAIKKS
Ga0181352_113516533300017747Freshwater LakeYTNSGAQAPLSHWRTYKPKEIFTQQDAWDLFFNMMEAGYTPFPGTSLPQLKAALKK
Ga0181343_1002195183300017766Freshwater LakeTQHDAWDLFFNMMEAGYNPFPGTSLPQLKEAIKKS
Ga0181343_100586313300017766Freshwater LakePKEIFTQHDAWDLFFNMMEAGYVPFPGTALPQLKSAIKK
Ga0181343_113045513300017766Freshwater LakePLSHWRTYKPKEIFTQHDAWDLFFNMMDASYVPFPGTALPQLKSAIKKQ
Ga0181358_114022933300017774Freshwater LakeFVLLYTKHGAQAPLKQWRTYKPKEIFTQHDAWSLFDSMMEAGYLPFPGVALPQLQTQGKT
Ga0181358_120680433300017774Freshwater LakeHTQSGSMAPLTHWRSYKPRTVFTQHNAWDLFDSMMDAGYVPFPGTALPQLASAIKKK
Ga0181357_120035313300017777Freshwater LakeTHWRSYKPRTVFTQHNAWDLFDSMMDAGYVPFPGTALPQLASAIKKK
Ga0181346_116623813300017780Freshwater LakeNKPKEVFTQHDAWDLFFNMMEAGYVPFPGTSLPQLKSALKKQ
Ga0181346_122925713300017780Freshwater LakeGSMAPLTHWRSYKPRTVFTQHNAWDLFDSMMDAGYVPFPGTALPQLASAIKKK
Ga0181346_129787933300017780Freshwater LakeEVFTQHDAWDLFFNMMEAGYVPFPGTSLPQLKSALKKQ
Ga0181348_102935513300017784Freshwater LakeEIFTRDDAWTLFDNMMNAGYVPYPGVALPQLKQALQKI
Ga0181348_124322013300017784Freshwater LakeYKPKEIFTQHDAWSLFDSMMEAGYLPFPGVALPQLQTQGKTL
Ga0181355_106404663300017785Freshwater LakeVFTQHDAWDLFFNMMEAGYVPFPGTSLPQLKSALKKQ
Ga0181355_127058333300017785Freshwater LakeMAPLTHWRSYKPRTVFTQHNAWDLFDSMMDAGYVPFPGTALPQLASAIKKK
Ga0194003_100059113300019724SedimentRSDQIFTQNHAWDLFFNMMEAGYVPFPGRSLPQLQSVVKKQ
Ga0181359_118623233300019784Freshwater LakeKPNEVFTQHHAWDLFFNMMEAGYVPFPGTSLPQLKTALKK
Ga0181359_121351233300019784Freshwater LakeFTQHNAWDLFDSMMDAGYVPFPGTALPQLASAIKKK
Ga0194115_1002939013300020183Freshwater LakePQEVFTQHHAWDLFFNMMEAGYTPFPGTSLPQLKAAVKKQ
Ga0194115_1032737343300020183Freshwater LakeLHTKSGAQAPLSHWRTYKPQEVFTQHHAWDLFFNMMEAGYTPFPGTSLPQLKTAVKKQ
Ga0194118_1059439013300020190Freshwater LakeTYKPKETFNQRDAWDLFFNMLEAGYVPFPGIALPQLQAAVKKS
Ga0194125_1085377833300020222Freshwater LakeFNQRDAWDLFFNMLEAGYVPFPGIALPQLQAAVKKS
Ga0208222_103308843300020566FreshwaterGAQAPLSHWRTYKPKDIFTQHDAWDLFFNMMEAGYVPFPGTALPQLKSAIKKQ
Ga0222712_1040165213300021963Estuarine WaterMAPLTHWRSYKPRTVFTQHDAWDLFDSMMDAGYVPFPGTALPQLASAIKKK
Ga0222719_1026035513300021964Estuarine WaterSHWRTYKAKEVFTQYHAWDLFFNMMEAGYVPFPGVSLPQLKSAIKKA
Ga0212028_103991343300022071AqueousSHWRNYKPDEHFTQNHAWDLFFNMMEAGYVPFPGRSLPQLQSVVKKQ
Ga0212031_102150213300022176AqueousKPSEVFTQHHAWDLFFNMMEAGYTPFPGTSLPQLKNAFKK
Ga0196899_113845533300022187AqueousTQYHAWDLFFNMMEAGYVPFPGVSLPQLKSAIKKA
Ga0196905_107289213300022198AqueousYGAQAPLTHWRSYMPKEVFTQNHAWDLFFNMMAAGYVPFPGTSLPQLKNAFKK
Ga0196901_117187013300022200AqueousPKEVFTQHHAWDLFFNMMDVGYVPFPGVSLPQLKSAIKK
Ga0208161_107820243300025646AqueousNNGAQAPLSHWRYYKPKEVFTQHHAWDLFFNMMEAGYVPFPGISLPQLKSAIKK
Ga0208428_114240813300025653AqueousHWRNYKPDEHFTQNHAWDLFFNMMEAGYVPFPGRSLPQLQSVVKKQ
Ga0208162_112177033300025674AqueousKYGAQAPLTHWRSYMPKEVFTQNHAWDLFFNMMAAGYVPFPGISLPQLKSAIKK
Ga0208162_115679633300025674AqueousQAPLTHWRSYMPKEVFTQNHAWDLFFNMMAAGYVPFPGVSLPQLKSAVKK
Ga0208019_118202913300025687AqueousEVFTQHHAWDLFFNMMEAGYVPFPGISLPQLKSAIKK
Ga0208644_113271253300025889AqueousKEVFTQHDAWDLFFNMMEAGYVPFPGTSLPQLKSALKKQ
Ga0209704_108583743300027693Freshwater SedimentTNSGAQAPLSHWRTYKPKDIFTQHDAWDLFFNMMEAGYVPFPGTALPQLKSAIKKQ
Ga0209033_110484243300027697Freshwater LakePKDVFTQHDAWDLFFNMCDVGYVPFPGTALPQLKSAVKK
Ga0209492_116784613300027721Freshwater SedimentPLSHWRTYKPKEIFTQHDAWDLFFNMMEAGYVPFPGTALPQLKSAIKK
Ga0209442_131148113300027732Freshwater LakeTKHGAQAPLKQWRTYKPKEIFTQHDAWSLFDSMMEAGYLPFPGVALPQLQTQGKTL
Ga0209288_1002040773300027762Freshwater SedimentFTQNHAWDLFFNMMEAGYVPFPGVALPQLKAAIKK
Ga0209990_1010232553300027816Freshwater LakeLSHWRTYKPNEILTQYDAWDLFFNMMEAGYNPFPGTSLPQLKEAIKKS
Ga0209298_1024304743300027973Freshwater LakeLLHTQSGSMAPLTHWRSYKPRTVFTQHDAWTLFDSMMDAGYVPFPGTALPQLASAIKKK
Ga0307378_1021213613300031566SoilFTQHDAWDLFSNMMDAGYAPFPGTSLPQLASAVKKNGN
Ga0307375_1067276033300031669SoilAQAPLKQWRTYKPKETFTQHDAWSLFDSMMEAGYLPFPGVALPQLQTQGKAL
Ga0307377_1055501013300031673SoilILLHTICGSMAPISHWRTYKPNEVFTQEHAWDLFFNMLEAGYVPFPLTSLPQLSTVLKKK
Ga0315291_1093202513300031707SedimentAQAPLSHWRTYKPKEIYTQHNAWDLFSSMLDAGYVPFPGTALPQLASAVKKQ
Ga0315907_10054126113300031758FreshwaterLSHWRTYKPNEILTQHDAWDLFFNMMEAGYNPFPGTSLPQLKEAIKKS
Ga0315288_1026742863300031772SedimentSGSMAPLTHWRSYKPRTVFTQHDAWDLFDSMMDAGYVPFPGTALPQLASAIKKK
Ga0315899_1103522213300031784FreshwaterNQSHAWDLFFNMMEAGYVPFPGTALPQLQSAIKKK
Ga0315290_1009952463300031834SedimentRFVLLHTQSGSMAPLTHWRSYKPRTVFTQHNAWDLFDSMMDAGYVPFPGTALPQLASAIKKK
Ga0315909_1079396333300031857FreshwaterGAQAPLTHWRTYKPKQTFNQQDAWDLFFSMLEAGYVPFPGIALPQLQAAVKKS
Ga0315902_1000740313300032093FreshwaterFNQSHAWDLFFNMMEAGYVPFPGTALPQLQSAIKKK
Ga0310130_0279880_1_1143300034073Fracking WaterFTEDDAWSLFDNMMEAGYVPFPGTSLPQLKNMTQDNG
Ga0335029_0320020_836_9703300034102FreshwaterRTYKPKEVFNQTHAWDLFFNMMEAGYVPFPGTALPQLQSAIKKK
Ga0335030_0406702_762_8813300034103FreshwaterNEVFNQSHAWDLFFNMMEAGYVPFPGIALPQLQSAIKKK
Ga0334997_0933594_2_1663300034280FreshwaterSGAQSPLTHWRTYKPKEVFTQHDAWDLFFNMMEAGYVPFPGTALPQLKSAIKKQ
Ga0335007_0579413_491_6523300034283FreshwaterSGAQAPLTHWRAYKPREIFNQRDAWDLFFNMMEAGYVPFPGTSLPQLKSALKK
Ga0348336_134466_2_1393300034375AqueousWRTYKAKEVFTQYHAWDLFFNMMEAGYVPFPGVSLPQLKSAIKKS


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