Metagenome Family F093713

Overview

Basic Information

• Family ID: F093713
• Family Type: Metagenome
• Number of Sequences: 106
• Average Sequence Length: 69 residues
• Representative Sequence: MNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA
• Number of Associated Samples: 48
• Number of Associated Scaffolds: 106

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 85.85 %
• % of genes near scaffold ends (potentially truncated): 23.58 %
• % of genes from short scaffolds (< 2000 bps): 79.25 %
• Associated GOLD sequencing projects: 36
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (52.830 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (78.302 % of family members)
• Environment Ontology (ENVO): Unclassified (99.057 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (98.113 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 84.06%
  β-sheet: 0.00%
  Coil/Unstructured: 15.94%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF01471	PG_binding_1	75.47
PF00589	Phage_integrase	8.49
PF02467	Whib	0.94
PF04586	Peptidase_S78	0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	0.94

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
All Organisms	root	All Organisms	47.17 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
cellular organisms	root	All Organisms → cellular organisms	44.34 %
Viruses	superkingdom	All Organisms → Viruses	2.83 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.34 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.94 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	31.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.94 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	31.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.94 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.94 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.94 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.94 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Chloroflexi bacterium HGW-Chloroflexi-10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-10	0.94 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.94 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002484|JGI25129J35166_1064246	All Organisms → cellular organisms → Bacteria	682
3300002484|JGI25129J35166_1091352	Not Available	541
3300002514|JGI25133J35611_10077049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1034
3300002514|JGI25133J35611_10092251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908
3300002514|JGI25133J35611_10144510	Not Available	659
3300002514|JGI25133J35611_10193969	Not Available	535
3300002518|JGI25134J35505_10052740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1014
3300002518|JGI25134J35505_10113772	Not Available	578
3300002519|JGI25130J35507_1006048	All Organisms → cellular organisms → Bacteria	3265
3300002519|JGI25130J35507_1009211	All Organisms → cellular organisms → Bacteria	2524
3300002519|JGI25130J35507_1010720	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2300
3300002519|JGI25130J35507_1011526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2203
3300002519|JGI25130J35507_1043659	Not Available	913
3300002519|JGI25130J35507_1047132	Not Available	867
3300002519|JGI25130J35507_1054363	Not Available	787
3300002519|JGI25130J35507_1061230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727
3300002519|JGI25130J35507_1069089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670
3300003494|JGI26240J51127_1023387	Not Available	1202
3300003494|JGI26240J51127_1035569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873
3300003495|JGI26244J51143_1022227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1307
3300003495|JGI26244J51143_1032197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	996
3300003498|JGI26239J51126_1053513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752
3300003618|JGI26381J51731_1085543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655
3300005400|Ga0066867_10024673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2458
3300005426|Ga0066847_10096396	Not Available	927
3300005431|Ga0066854_10115717	Not Available	896
3300005508|Ga0066868_10035764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1601
3300006736|Ga0098033_1013340	Not Available	2618
3300006736|Ga0098033_1043969	Not Available	1323
3300006736|Ga0098033_1057186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-10	1140
3300006736|Ga0098033_1083016	Not Available	919
3300006736|Ga0098033_1133541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699
3300006736|Ga0098033_1186690	Not Available	576
3300006736|Ga0098033_1191010	Not Available	568
3300006736|Ga0098033_1191541	Not Available	567
3300006736|Ga0098033_1206004	Not Available	544
3300006736|Ga0098033_1214130	Not Available	532
3300006738|Ga0098035_1055390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1440
3300006738|Ga0098035_1058208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1397
3300006738|Ga0098035_1233223	Not Available	609
3300006751|Ga0098040_1001334	All Organisms → cellular organisms → Bacteria	10726
3300006751|Ga0098040_1208669	Not Available	570
3300006753|Ga0098039_1025787	Not Available	2100
3300006753|Ga0098039_1124496	Not Available	884
3300006754|Ga0098044_1369564	Not Available	542
3300006926|Ga0098057_1031680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1314
3300006927|Ga0098034_1112774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776
3300006927|Ga0098034_1240739	Not Available	501
3300006929|Ga0098036_1279604	Not Available	503
3300006988|Ga0098064_106609	Not Available	1976
3300007504|Ga0104999_1052869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1831
3300007765|Ga0105010_1038235	All Organisms → Viruses → Predicted Viral	1908
3300010153|Ga0098059_1309946	Not Available	602
3300010155|Ga0098047_10013695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3286
3300010155|Ga0098047_10309760	Not Available	596
3300010155|Ga0098047_10316451	Not Available	588
3300010155|Ga0098047_10350497	Not Available	555
3300017705|Ga0181372_1026669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982
3300017775|Ga0181432_1083524	Not Available	935
3300020423|Ga0211525_10194683	Not Available	859
3300021443|Ga0206681_10370667	Not Available	553
3300022225|Ga0187833_10347034	Not Available	808
3300022225|Ga0187833_10352607	Not Available	799
3300022225|Ga0187833_10503524	Not Available	622
3300022227|Ga0187827_10145402	Not Available	1678
3300022227|Ga0187827_10704931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572
3300022227|Ga0187827_10836373	Not Available	505
(restricted) 3300022888|Ga0233428_1081508	Not Available	1226
(restricted) 3300022933|Ga0233427_10447485	Not Available	512
3300025038|Ga0208670_110728	Not Available	1060
3300025072|Ga0208920_1000230	All Organisms → cellular organisms → Bacteria	15015
3300025072|Ga0208920_1000264	All Organisms → cellular organisms → Bacteria	13960
3300025072|Ga0208920_1043011	Not Available	916
3300025078|Ga0208668_1001077	All Organisms → cellular organisms → Bacteria	7271
3300025082|Ga0208156_1061893	All Organisms → cellular organisms → Bacteria	727
3300025082|Ga0208156_1075523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636
3300025097|Ga0208010_1003925	All Organisms → cellular organisms → Bacteria	4415
3300025097|Ga0208010_1054210	Not Available	885
3300025109|Ga0208553_1011902	Not Available	2400
3300025109|Ga0208553_1132902	Not Available	556
3300025112|Ga0209349_1002964	All Organisms → cellular organisms → Bacteria	7866
3300025112|Ga0209349_1004689	All Organisms → cellular organisms → Bacteria	6001
3300025112|Ga0209349_1013476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3071
3300025112|Ga0209349_1071851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1033
3300025112|Ga0209349_1084605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928
3300025114|Ga0208433_1095256	Not Available	743
3300025114|Ga0208433_1104996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697
3300025122|Ga0209434_1015726	All Organisms → cellular organisms → Bacteria	2668
3300025122|Ga0209434_1017299	All Organisms → cellular organisms → Bacteria	2513
3300025122|Ga0209434_1021257	Not Available	2208
3300025122|Ga0209434_1021653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2184
3300025122|Ga0209434_1022020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2161
3300025122|Ga0209434_1034643	All Organisms → Viruses → Predicted Viral	1631
3300025122|Ga0209434_1089654	Not Available	892
3300025122|Ga0209434_1171618	Not Available	578
3300025131|Ga0209128_1119405	Not Available	825
3300025131|Ga0209128_1141610	Not Available	729
3300025141|Ga0209756_1061637	Not Available	1770
3300025141|Ga0209756_1213039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731
3300025141|Ga0209756_1273008	Not Available	609
3300025141|Ga0209756_1304104	Not Available	561
3300025547|Ga0209556_1023089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1832
3300025547|Ga0209556_1094611	Not Available	658
3300025770|Ga0209362_1079337	Not Available	1280
3300026267|Ga0208278_1020568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1779
3300028039|Ga0256380_1005472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1921

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Type

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	83.96%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	9.43%
Inlet	Environmental → Aquatic → Marine → Inlet	1.89%
Coastal	Environmental → Aquatic → Marine → Coastal	1.89%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.94%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.94%
Strait	Environmental → Aquatic → Marine → Strait	0.94%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	83.96%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	9.43%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.94%

Habitat

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	78.30%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	8.49%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	5.66%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	1.89%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.94%
Water Column	Environmental → Aquatic → Marine → Coastal → Unclassified → Water Column	0.94%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.94%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.94%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.94%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.94%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
3300002484	Marine viral communities from the Pacific Ocean - ETNP_2_130	Environmental
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental
3300002519	Marine viral communities from the Pacific Ocean - ETNP_2_300	Environmental
3300003494	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_150m_DNA	Environmental
3300003495	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_150m_DNA	Environmental
3300003498	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_130m_DNA	Environmental
3300003618	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_165m_DNA	Environmental
3300005400	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261	Environmental
3300005426	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74	Environmental
3300005431	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75	Environmental
3300005508	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259	Environmental
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental
3300006988	Marine viral communities from Cariaco Basin, Caribbean Sea - 24B_WHOI_OMZ_CsCl	Environmental
3300007504	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 2.7-0.2um, replicate a	Environmental
3300007765	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 2.7-0.2um, replicate b	Environmental
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental
3300017705	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaG	Environmental
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental
3300020423	Marine microbial communities from Tara Oceans - TARA_B100000315 (ERX556027-ERR599062)	Environmental
3300021443	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015	Environmental
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental
3300022888 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_120_MG	Environmental
3300022933 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_100_MG	Environmental
3300025038	Marine viral communities from Cariaco Basin, Caribbean Sea - 24B_WHOI_OMZ_CsCl (SPAdes)	Environmental
3300025072	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)	Environmental
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental
3300025082	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)	Environmental
3300025097	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)	Environmental
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental
3300025114	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)	Environmental
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental
3300025547	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_150m_DNA (SPAdes)	Environmental
3300025770	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA (SPAdes)	Environmental
3300026267	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259 (SPAdes)	Environmental
3300028039	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 2300m	Environmental

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25129J35166_10642462	3300002484	Marine	MNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA*
JGI25129J35166_10913521	3300002484	Marine	MEDNMNDILVRAGKTWLQTFAGLLVASWASRNINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA*
JGI25133J35611_100770492	3300002514	Marine	MEDNMNDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPGA*
JGI25133J35611_100922512	3300002514	Marine	MEDNMNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSVKLAKPGA*
JGI25133J35611_101445102	3300002514	Marine	MNDILVRAGKTWLQTFAGLLVASWASRNINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA*
JGI25133J35611_101939691	3300002514	Marine	MNDILVRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPGA*
JGI25134J35505_100527402	3300002518	Marine	MNDILVRAGKTWLQTFAGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLAKPGA*
JGI25134J35505_101137723	3300002518	Marine	WLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA*
JGI25130J35507_10060485	3300002519	Marine	VRDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVXXXXNSLKLAKPGA*
JGI25130J35507_10092115	3300002519	Marine	MNDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPNA*
JGI25130J35507_10107204	3300002519	Marine	VRDILTRAGKTWLQTFVGLLVASWASRTIXIETLDPLQELSTIAGXAFASIPAAVSXLQNSLKLAKPGA*
JGI25130J35507_10115261	3300002519	Marine	MRDILVRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLAKPGA*
JGI25130J35507_10436593	3300002519	Marine	VNDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA*
JGI25130J35507_10471322	3300002519	Marine	MEDNVNDILTRAGKTWLQTFGGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLVKPGA*
JGI25130J35507_10543632	3300002519	Marine	MRDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSVKLAKPGA*
JGI25130J35507_10612302	3300002519	Marine	MNDILVRAGKTWLQTFIGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA*
JGI25130J35507_10690892	3300002519	Marine	MRDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSVKLAK
JGI26240J51127_10233871	3300003494	Marine	TRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLANPNA*
JGI26240J51127_10355691	3300003494	Marine	MEDNVNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLSQTDA*
JGI26244J51143_10222272	3300003495	Marine	VNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLANPNA*
JGI26244J51143_10321972	3300003495	Marine	MEDNVNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLANPNA*
JGI26239J51126_10535132	3300003498	Marine	MEDNVNDIXTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLANPNA*
JGI26381J51731_10855432	3300003618	Marine	MEDNVNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLK
Ga0066867_100246734	3300005400	Marine	MEDNVNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPGA*
Ga0066847_100963963	3300005426	Marine	MNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPGA*
Ga0066854_101157172	3300005431	Marine	MEDNVNDILTRAGKTWLQTFIGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLAKPGA*
Ga0066868_100357644	3300005508	Marine	MNDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPGA*
Ga0098033_10133405	3300006736	Marine	MNDILVRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA*
Ga0098033_10439691	3300006736	Marine	EQVVEDNVNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA*
Ga0098033_10571862	3300006736	Marine	MNDILTRAGKTWLQTFGGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLVKPGA*
Ga0098033_10830162	3300006736	Marine	MNDILIRAGKTWLQTFIGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLAKPLA*
Ga0098033_11335412	3300006736	Marine	VRDILVRAGKTWLQTFVGLLVASWASRNINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA*
Ga0098033_11866902	3300006736	Marine	MNDILTRAGKTWLQTFGGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLAKPGA*
Ga0098033_11910102	3300006736	Marine	MEDNVNDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA*
Ga0098033_11915411	3300006736	Marine	KTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPGA
Ga0098033_12060042	3300006736	Marine	MNDILIRAGKTWLQTFVGLLVASWASRNINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPGA*
Ga0098033_12141302	3300006736	Marine	MEDNVNDILVRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPGA*
Ga0098035_10553903	3300006738	Marine	MRDILVRAGKTWLQTFVGLLVASWASRNINIETLDPLQELSTIAGFAFASIPAAVSVLQNSVKLTQNA*
Ga0098035_10582083	3300006738	Marine	VEDNVNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA*
Ga0098035_12332231	3300006738	Marine	HRRHRRNQHLEPIVEDNMNDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPGA*
Ga0098040_10013348	3300006751	Marine	VNDILVRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSVKLTQNA*
Ga0098040_12086692	3300006751	Marine	VNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA*
Ga0098039_10257874	3300006753	Marine	MEDNVNDILTRAGKTWLQTFIGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVS
Ga0098039_11244961	3300006753	Marine	LEPTLEDNMNDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA*
Ga0098044_13695642	3300006754	Marine	VNDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPGA*
Ga0098057_10316804	3300006926	Marine	MNDILIRAGKTWLQTFIGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQN
Ga0098034_11127742	3300006927	Marine	MNDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSL
Ga0098034_12407391	3300006927	Marine	MRDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQN
Ga0098036_12796042	3300006929	Marine	MEDNVNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPNA*
Ga0098064_1066092	3300006988	Marine	MNDILTRAGKTWLQTFIGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSMKLATPDA*
Ga0104999_10528691	3300007504	Water Column	MNDILIRAGKTWLQTFIGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSMKLATPDA*
Ga0105010_10382355	3300007765	Marine	MEDNMNDILIRAGKTWLQTFIGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSMKLATPV
Ga0098059_13099462	3300010153	Marine	MEDNVNDILVRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA*
Ga0098047_100136952	3300010155	Marine	MRDILVRASKTWLQTFVGLLVASWASRNINIETLDPLQELSTIAGFAFASIPAAVSVLQNSVKLTQNA*
Ga0098047_103097602	3300010155	Marine	VNDILVRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA*
Ga0098047_103164513	3300010155	Marine	QTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPGA*
Ga0098047_103504973	3300010155	Marine	NDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA*
Ga0181372_10266691	3300017705	Marine	MRDILVRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA
Ga0181432_10835244	3300017775	Seawater	NQHLESTVEDNMNDILIRAGKTWLQTFIGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLAKPGA
Ga0211525_101946832	3300020423	Marine	MRDILIRAGKTWLQTFIGLLVASWASRNINIETLDPLQELSTIAGFAFASIPAAVSVLQNSVKLTQNA
Ga0206681_103706671	3300021443	Seawater	QHLEPLMEDNVNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLANPNA
Ga0187833_103470342	3300022225	Seawater	MNDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPGA
Ga0187833_103526072	3300022225	Seawater	MRDILVRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLAKPGA
Ga0187833_105035242	3300022225	Seawater	MEDNVNDILTRAGKTWLQTFGGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLVKPGA
Ga0187827_101454024	3300022227	Seawater	MNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPGA
Ga0187827_107049311	3300022227	Seawater	MNDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSA
Ga0187827_108363731	3300022227	Seawater	MEDNVNDILTRAGKTWLQTFVGLLIASWASRTINIETLDPFQELSTIAGFAVASIPAAVSVI
(restricted) Ga0233428_10815083	3300022888	Seawater	MEDNVNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLANPNA
(restricted) Ga0233427_104474852	3300022933	Seawater	MEDNVNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLANPGA
Ga0208670_1107284	3300025038	Marine	MNDILTRAGKTWLQTFIGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSMKLATPDA
Ga0208920_10002307	3300025072	Marine	MRDILVRAGKTWLQTFVGLLVASWASRNINIETLDPLQELSTIAGFAFASIPAAVSVLQNSVKLTQNA
Ga0208920_10002648	3300025072	Marine	MEDNVNDILVRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPGA
Ga0208920_10430113	3300025072	Marine	VNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPGA
Ga0208668_10010776	3300025078	Marine	VNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA
Ga0208156_10618932	3300025082	Marine	MNDILTRAGKTWLQTFGGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLVKPGA
Ga0208156_10755231	3300025082	Marine	VNDILVRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA
Ga0208010_10039257	3300025097	Marine	VEDNVNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA
Ga0208010_10542103	3300025097	Marine	MRDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA
Ga0208553_10119024	3300025109	Marine	MEDNVNDILTRAGKTWLQTFIGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLAKPGA
Ga0208553_11329023	3300025109	Marine	HLEPTLEDNMNDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA
Ga0209349_10029649	3300025112	Marine	MEDNVNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPGA
Ga0209349_10046898	3300025112	Marine	MEDNMNDILVRAGKTWLQTFAGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLAKPGA
Ga0209349_10134764	3300025112	Marine	MNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA
Ga0209349_10718512	3300025112	Marine	MEDNMNDILVRAGKTWLQTFAGLLVASWASRNINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA
Ga0209349_10846051	3300025112	Marine	MNDILVRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPGA
Ga0208433_10952563	3300025114	Marine	VNDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA
Ga0208433_11049961	3300025114	Marine	VRDILVRAGKTWLQTFVGLLVASWASRNINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA
Ga0209434_10157264	3300025122	Marine	MNDILIRAGKTWLQTFIGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLAKPGA
Ga0209434_10172991	3300025122	Marine	VRDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLAKPGA
Ga0209434_10212575	3300025122	Marine	MNDILVRAGKTWLQTFAGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLAKPGA
Ga0209434_10216534	3300025122	Marine	VRDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSVLQNSLKLAKPGA
Ga0209434_10220204	3300025122	Marine	MNDILVRAGKTWLQTFIGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA
Ga0209434_10346431	3300025122	Marine	MNDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLAKPGA
Ga0209434_10896542	3300025122	Marine	MRDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSVKLAKPGA
Ga0209434_11716182	3300025122	Marine	MNDILVRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLAKPGA
Ga0209128_11194054	3300025131	Marine	RAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA
Ga0209128_11416103	3300025131	Marine	KTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSVKLAKPGA
Ga0209756_10616375	3300025141	Marine	KTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA
Ga0209756_12130392	3300025141	Marine	MNDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLA
Ga0209756_12730082	3300025141	Marine	MNDILVRAGKTWLQTFAGLLVASWASRNINIETLDPLQELSTIAGFAFASIPAAVSALQNSLKLAKPGA
Ga0209756_13041042	3300025141	Marine	MNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSVKLAKPGA
Ga0209556_10230892	3300025547	Marine	VNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLANPNA
Ga0209556_10946112	3300025547	Marine	MEDNVNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLSQTDA
Ga0209362_10793371	3300025770	Marine	DNVNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGFAFASIPAAVSVLQNSLKLANPNA
Ga0208278_10205684	3300026267	Marine	MEDNMNDILIRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTIAGLAFASIPAAVSALQNSLKLAKPGA
Ga0256380_10054723	3300028039	Seawater	MEQIVENNMNDILTRAGKTWLQTFVGLLVASWASRTINIETLDPLQELSTVAGFAFASIPAAVSVLQNSMKLAQPDA