Metagenome / Metatranscriptome Family F093674

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093674
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	90 residues
Representative Sequence	LQLNIENDSVSWVLFSLVGYANILTAEGKRNSALQILGLCMYHPETNSDTHRDIQLVLEDLKKVRSDDIEVELERGKSLDLNKTVVTALGG
Number of Associated Samples	95
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.98 %
% of genes near scaffold ends (potentially truncated)	92.45 %
% of genes from short scaffolds (< 2000 bps)	90.57 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.87

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.132 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (14.151 % of family members)
Environment Ontology (ENVO)	Unclassified (31.132 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.623 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.94% β-sheet: 0.00% Coil/Unstructured: 47.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.87
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.87
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SCOP family	SCOP domain	Representative PDB	TM-score
a.118.17.2: Exocyst complex component	d2d2sa1	2d2s	0.63928
a.118.8.2: Transcription factor MalT domain III	d1hz4a_	1hz4	0.61766
a.118.8.1: Tetratricopeptide repeat (TPR)	d1zb1a_	1zb1	0.61584
a.102.1.0: automated matches	d5gxxa1	5gxx	0.6079
a.118.8.0: automated matches	d6kp3a_	6kp3	0.60495

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF13625	Helicase_C_3	55.66
PF00211	Guanylate_cyc	3.77
PF13191	AAA_16	0.94
PF13424	TPR_12	0.94
PF13185	GAF_2	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	3.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.13 %
Unclassified	root	N/A	18.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.13 %
Unclassified	root	N/A	18.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.13 %
Unclassified	root	N/A	18.87 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	70.75 %
Unclassified	root	N/A	18.87 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	70.75 %
Unclassified	root	N/A	18.87 %

Name	Rank	Taxonomy	Distribution
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	54.72 %
Unclassified	root	N/A	18.87 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	4.72 %
Tepidiformia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia	0.94 %

Name	Rank	Taxonomy	Distribution
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	52.83 %
Unclassified	root	N/A	18.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.72 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	1.89 %
unclassified Tepidiformia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia → unclassified Tepidiformia	0.94 %

Name	Rank	Taxonomy	Distribution
Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	50.00 %
Unclassified	root	N/A	18.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.72 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2.83 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1.89 %
Chloroflexi bacterium OLB14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia → unclassified Tepidiformia → Chloroflexi bacterium OLB14	0.94 %

Name	Rank	Taxonomy	Distribution
Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	50.00 %
Unclassified	root	N/A	18.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.72 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2.83 %
Anaerolinea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Anaerolinea	0.94 %
Chloroflexi bacterium OLB14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia → unclassified Tepidiformia → Chloroflexi bacterium OLB14	0.94 %

Name	Rank	Taxonomy	Distribution
Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	50.00 %
Unclassified	root	N/A	18.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.72 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2.83 %
Anaerolinea thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Anaerolinea → Anaerolinea thermophila	0.94 %
Chloroflexi bacterium OLB14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia → unclassified Tepidiformia → Chloroflexi bacterium OLB14	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_10348035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	577	Open in IMG/M
3300000559\|F14TC_101244487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	867	Open in IMG/M
3300000787\|JGI11643J11755_11758905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	718	Open in IMG/M
3300000787\|JGI11643J11755_11786396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	914	Open in IMG/M
3300000890\|JGI11643J12802_11828704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	813	Open in IMG/M
3300000953\|JGI11615J12901_10994197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	728	Open in IMG/M
3300001139\|JGI10220J13317_10962959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	515	Open in IMG/M
3300004006\|Ga0055453_10303092	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300004019\|Ga0055439_10192173	Not Available	650	Open in IMG/M
3300004114\|Ga0062593_101374874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	753	Open in IMG/M
3300004157\|Ga0062590_102532578	Not Available	544	Open in IMG/M
3300004463\|Ga0063356_104960007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	572	Open in IMG/M
3300004643\|Ga0062591_102894304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	509	Open in IMG/M
3300004643\|Ga0062591_102985777	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300005293\|Ga0065715_10493091	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300005295\|Ga0065707_10116426	All Organisms → cellular organisms → Bacteria	2238	Open in IMG/M
3300005328\|Ga0070676_11542245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia → unclassified Tepidiformia → Chloroflexi bacterium OLB14	512	Open in IMG/M
3300005332\|Ga0066388_108263380	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005340\|Ga0070689_100961706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	758	Open in IMG/M
3300005406\|Ga0070703_10363401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	621	Open in IMG/M
3300005438\|Ga0070701_10444638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	831	Open in IMG/M
3300005444\|Ga0070694_100071232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Anaerolinea → Anaerolinea thermophila	2395	Open in IMG/M
3300005444\|Ga0070694_100991269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	697	Open in IMG/M
3300005457\|Ga0070662_100964383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	729	Open in IMG/M
3300005466\|Ga0070685_11276704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	560	Open in IMG/M
3300005467\|Ga0070706_100908554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	813	Open in IMG/M
3300005471\|Ga0070698_101033133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	769	Open in IMG/M
3300005546\|Ga0070696_100420367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1049	Open in IMG/M
3300005549\|Ga0070704_100776516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	855	Open in IMG/M
3300005577\|Ga0068857_102470566	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005617\|Ga0068859_101464471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	753	Open in IMG/M
3300005719\|Ga0068861_100988670	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005829\|Ga0074479_10625034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	523	Open in IMG/M
3300005836\|Ga0074470_10082953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	543	Open in IMG/M
3300005879\|Ga0075295_1060742	Not Available	523	Open in IMG/M
3300006755\|Ga0079222_11139989	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300006845\|Ga0075421_100443403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	1552	Open in IMG/M
3300006846\|Ga0075430_100988998	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300006846\|Ga0075430_101143095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	641	Open in IMG/M
3300006853\|Ga0075420_101246156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	639	Open in IMG/M
3300006853\|Ga0075420_101937583	Not Available	503	Open in IMG/M
3300006904\|Ga0075424_101110206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	843	Open in IMG/M
3300006918\|Ga0079216_10696224	Not Available	723	Open in IMG/M
3300006954\|Ga0079219_10842078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	729	Open in IMG/M
3300006969\|Ga0075419_11369265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	527	Open in IMG/M
3300009094\|Ga0111539_11494107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	784	Open in IMG/M
3300009100\|Ga0075418_12146826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	609	Open in IMG/M
3300009101\|Ga0105247_11844758	Not Available	504	Open in IMG/M
3300009147\|Ga0114129_12368994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	636	Open in IMG/M
3300009162\|Ga0075423_10410824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1421	Open in IMG/M
3300009162\|Ga0075423_11529789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	716	Open in IMG/M
3300009176\|Ga0105242_13031467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	520	Open in IMG/M
3300009789\|Ga0126307_10760866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	782	Open in IMG/M
3300009840\|Ga0126313_10368342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1135	Open in IMG/M
3300009873\|Ga0131077_11466990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	561	Open in IMG/M
3300010038\|Ga0126315_10976409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	566	Open in IMG/M
3300010039\|Ga0126309_10494026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	752	Open in IMG/M
3300010039\|Ga0126309_10888302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	589	Open in IMG/M
3300010041\|Ga0126312_10124032	Not Available	1779	Open in IMG/M
3300010041\|Ga0126312_11497524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	500	Open in IMG/M
3300010044\|Ga0126310_10983514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	663	Open in IMG/M
3300010166\|Ga0126306_10974880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	690	Open in IMG/M
3300010399\|Ga0134127_12649328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	581	Open in IMG/M
3300010403\|Ga0134123_11105315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	816	Open in IMG/M
3300011433\|Ga0137443_1271999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	503	Open in IMG/M
3300011434\|Ga0137464_1284472	Not Available	500	Open in IMG/M
3300012022\|Ga0120191_10155125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	526	Open in IMG/M
3300012166\|Ga0137350_1036722	Not Available	936	Open in IMG/M
3300012179\|Ga0137334_1127022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	577	Open in IMG/M
3300012228\|Ga0137459_1158433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	667	Open in IMG/M
3300012231\|Ga0137465_1074205	Not Available	1013	Open in IMG/M
3300012355\|Ga0137369_10299610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1193	Open in IMG/M
3300012902\|Ga0157291_10140611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	706	Open in IMG/M
3300012989\|Ga0164305_11555954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	588	Open in IMG/M
3300013760\|Ga0120188_1021028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	683	Open in IMG/M
3300014270\|Ga0075325_1081726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	736	Open in IMG/M
3300014874\|Ga0180084_1101473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	601	Open in IMG/M
3300014884\|Ga0180104_1186451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	619	Open in IMG/M
3300018054\|Ga0184621_10276656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	595	Open in IMG/M
3300018059\|Ga0184615_10693652	Not Available	518	Open in IMG/M
3300018081\|Ga0184625_10504077	Not Available	610	Open in IMG/M
3300018920\|Ga0190273_11927273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	544	Open in IMG/M
3300020003\|Ga0193739_1129651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	620	Open in IMG/M
3300021090\|Ga0210377_10134989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1622	Open in IMG/M
3300021090\|Ga0210377_10169145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	1413	Open in IMG/M
3300021333\|Ga0210324_1139019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	530	Open in IMG/M
3300024430\|Ga0196962_10002901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	5499	Open in IMG/M
3300025521\|Ga0210083_1025311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	846	Open in IMG/M
3300025936\|Ga0207670_11546736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	564	Open in IMG/M
3300026118\|Ga0207675_100633425	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300027462\|Ga0210000_1030467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	843	Open in IMG/M
3300027873\|Ga0209814_10161576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	962	Open in IMG/M
3300027909\|Ga0209382_10148445	All Organisms → cellular organisms → Bacteria	2718	Open in IMG/M
3300027909\|Ga0209382_11222707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	767	Open in IMG/M
(restricted) 3300027995\|Ga0233418_10067947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	1024	Open in IMG/M
3300031229\|Ga0299913_11965838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	531	Open in IMG/M
3300031576\|Ga0247727_10985997	Not Available	582	Open in IMG/M
3300031852\|Ga0307410_11983771	Not Available	519	Open in IMG/M
3300032002\|Ga0307416_100163410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2062	Open in IMG/M
3300032157\|Ga0315912_10805831	Not Available	747	Open in IMG/M
3300034128\|Ga0370490_0239031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG03_land_8_20_14_0_80_58_20	599	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.81%
Host-Associated	Host-Associated	29.25%
Engineered	Engineered	0.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.94%
Plants	Host-Associated → Plants	29.25%
Aquatic	Environmental → Aquatic	18.87%
Wastewater	Engineered → Wastewater	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.75%
Sediment	Environmental → Aquatic → Sediment	12.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.49%
Marine	Environmental → Aquatic → Marine	3.77%
Freshwater	Environmental → Aquatic → Freshwater	2.83%
Cave	Environmental → Terrestrial → Cave	0.94%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.26%
Loam	Environmental → Terrestrial → Soil → Loam	12.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.55%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.83%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.89%
Lake	Environmental → Aquatic → Freshwater → Lake	0.94%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.94%
Sand	Environmental → Terrestrial → Soil → Sand	0.94%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.94%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.66%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.89%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.94%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.94%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.94%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.94%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.15%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	9.43%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.77%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.89%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.89%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.94%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.94%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.94%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.94%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.94%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005879	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012166	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2	Environmental	Open in IMG/M
3300012179	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013760	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep2	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014874	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_2_16_10D	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021333	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.191 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025521	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027462	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027995 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_1_MG	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_103480352	3300000363	Soil	EALQFNLENDSLSWVLFSLVGYANILAAEGKRTAALQILGLCMYHPETNSDTHRDIEIVLEDLKRAGSEDIEAELARGKSLDLNRTVVAALGG*
F14TC_1012444872	3300000559	Soil	REALQLNIENNSIAWILFSLVGYANILAAESKRGQALEVLGLCMYHPEXXXXXXXDIQIVLEVLKKVHSDDITIGLERGKLLNLNKMVVTALGG*
JGI11643J11755_117589051	3300000787	Soil	AYATVREALQLNIENDSISWVLFSLVGYANILAGEGKRESALEILGLCMAHPETNSDTHRDIQLVLEDLSKVRSDDIEAGLERGKSLDLNKTVVMALGG*
JGI11643J11755_117863962	3300000787	Soil	LGENREAYASLREALQLNIENDSISWVLFSLVGYANILAAEGKRNFALQILGLCMNHPETNSDTHRDIHLVLEDLKRVRSDDIEAEFERGKSLDVNKTVLMALGG*
JGI11643J12802_118287041	3300000890	Soil	LFSLVGYADILAAEGKRDQSLDVLGVCLHHPDTNSDTHRDIQIVLNDLKRARMDDIEVGLERGKLLEVKEVVIR
JGI11615J12901_109941971	3300000953	Soil	ELREAYASLNEALQLNLENDSISWVLFSLVGYANILAAEGKRSSALQVLGLCMHHPETNSDTHRDIGLVLEDLKKVRSDDIEPELERGKSLDLNRTVVAALGG*
JGI10220J13317_109629592	3300001139	Soil	AYVSLRAALQLNIENDSVSWVLFSLAGYANILVAEGKRESALEILGLCINHPETNSDTQRDIQLVLEDLKKVRSDDIEAGLERGKLLDINKTVLMALGG*
Ga0055453_103030921	3300004006	Natural And Restored Wetlands	FREAYASLSEALQLNIENDSISWVLFSLVGYANILAAEGKRKSALQILGLCLYHPETNSDTHRDIQLVLEDLKKVRSDDIEADLELGKSLDLNKTVVMALGG*
Ga0055439_101921732	3300004019	Natural And Restored Wetlands	VIFSLVGYANILAAEGKREQALDVLGLCLNHPETNSDTQRDIQIVLADLRKTRADDIQTGLEHGRSVNLNEIVVTALGG*
Ga0062593_1013748741	3300004114	Soil	MENDSVSWILFSLVGYADILAAEGKREQSLNMLGLCMYHPETNSDTKRDIQLVLENLKHVREDDIEAGLERGKLLDLNHAVITALGG*
Ga0062590_1025325782	3300004157	Soil	TSWILFSLVGYANILAAEGKRERALEILGLCAHHADVNSDTQRDIELILEELKKARSDDIEAGMERGKALELNQTVVAALGG*
Ga0063356_1049600072	3300004463	Arabidopsis Thaliana Rhizosphere	AYASVREALQFNIEGDSTSWILFSLVSYANILAAEGKREHALEVLGLCMNHPETNSDTHRDIKLVLEDLKKVRSDDIDAGLERGKSLDIKDVVITALGG*
Ga0062591_1028943042	3300004643	Soil	SLVGYANILVAEGKRESALEILGLCINHPETNSDTQRDIQLVLEDLKKVRSDDIEAGLERGKLLDINKTVLMALGG*
Ga0062591_1029857771	3300004643	Soil	SQVGLGELREAYASLSEALQLNIENDSISWVLFSLVGYANILTAEGKRKSALQILGLCMYHPETNSDTHRDIQIVLEDLKKVCSDDIEEELERGKSLDLNKTVVMALGG*
Ga0065715_104930912	3300005293	Miscanthus Rhizosphere	LNIENDSVSWVLFSLVGYADILAAEGKRQLALEVLGLCINHPETNSDTRRDIQLVLDDLKKAHLEDIEAGLERGKLLDINKTVLMALGG*
Ga0065707_101164263	3300005295	Switchgrass Rhizosphere	ALQLNIENDSISWVLFSLVGYANILVAEGKREAALQILGLCMHHPETNSDTHRDIYLVLEDLKKERSDDIEAELEHGKSLDVNKTVLMALGG*
Ga0070676_115422452	3300005328	Miscanthus Rhizosphere	SQVGLKEISDAYVSLRAALQLNFENDSVSWVLFSLVGYANILVAEGKRESALEILGLCINHPETNSDTQRDIQLVLEDLKKVRSDDIEAGLEHGKLLDINKTVLMALGG*
Ga0066388_1082633801	3300005332	Tropical Forest Soil	EALQVNMENDSIAWVLFSLVGYADILAAEGKRDQALDVLGLCRYHPETNSDTHRDIQLVLNDLKIARTDDIETGLQRGKLLDLKEVVINALGG*
Ga0070689_1009617062	3300005340	Switchgrass Rhizosphere	FSLVGYADILAAEGKRELALEVLGLCMNHPETNSDTRRDIQLVLDDLKKVRSDDIEAGLEHGKLLDINKTVLMALGG*
Ga0070703_103634012	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	LVGYANILAAEGKRDIALEVLGLCLNHAETNSDTRRDIQLVIEDLKKLRSDDIEAGLESGKLLDINRTVLMALGG*
Ga0070701_104446381	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	ENDSISWVLFSLVGYANILAAEGKRDIALEVLGLCLNHPETNSDTRRDIQLVIEDLKKLRSDDIEAGLESGKLLDINRTVLMALGG*
Ga0070694_1000712321	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	SEALQLNIENDSISWVLFSLVGYANILTAEGKRKSALQILGLCMYHPETNSDTHRDIQLVLEDLKKVRSDDIEVELERGKSLDLNKTVVMALGG*
Ga0070694_1009912691	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	WVLFSLVGYANILTAEGRRERALEILGLCKFHPETNSDTHRDIELVIDDLKKTRTDDIEAGLEHGRSLDLKEAVITALGG*
Ga0070662_1009643831	3300005457	Corn Rhizosphere	YANIIAGEGKRASALEILGMCMEHPETNSDTHRDIQLVLEDLRKVRSDDIEAGLERGKSLDLNKTVVMALGG*
Ga0070685_112767041	3300005466	Switchgrass Rhizosphere	LFSLVGYANIIAGEGKRASALEILGMCMDHPETNSDTHRDIQLVLEDLRKVRSDDIEAGLERGKSLDLNKTVVMALGG*
Ga0070706_1009085542	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RDAYASLRSALQLNIENDSISWVLFSLVGYANILAAEGKRDIALEVLGLCLNHAETNSDTRRDIQLVIEDLKKLRSDDIEAGLESGKLLDINRTVLMALGG*
Ga0070698_1010331331	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	EALQLNIENDSISWVLFSLVAYANILTAEGKRKSALQILGLCMYHPETNSDTHRDIQLVLEDLKKVRSDDIEVELERGKSLDLNKTVVMALGG*
Ga0070696_1004203671	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	QLNMENDSVSWVLFSLAGYANILAAEGQREQALDVLGLCLNHAEINSDTKRDIQIVLEELKRTRVDDIEAGLERGKLLDLKDVVVTALGG*
Ga0070704_1007765162	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	ALHLNIENDSVSWVLFSLVGYANILAAEGRRERALEILGLCKFHPETNSDTHRDIELVIDDLKKTRTDDIEAGLEHGRSLDLKEAVITALGG*
Ga0068857_1024705662	3300005577	Corn Rhizosphere	GDAYVSLRAALQLNIENDSVSWVLFSLAGYANILVAEGKRESALEILGLCINHPETNSDTHRDIQLVLEDLKKVRSDDIEAGLERGKLLDINKTVLMALGG*
Ga0068859_1014644711	3300005617	Switchgrass Rhizosphere	DSISWVLFSLVGYANIIAGEGKRASALEILGMCMDHPETNSDTHRDIQLVLEDLRNVRSDDIEAGLERGKSLDLNKTVVMALGG*
Ga0068861_1009886702	3300005719	Switchgrass Rhizosphere	SVSWILFSLVGFANILAAEGKRQAALQILGLCMHHPETNSDTHRDIQLVIEDLKKIGSDDIETGLEAGRSLDLNKTVLMALGG*
Ga0074479_106250342	3300005829	Sediment (Intertidal)	GEALQINMEHASMSWVIFSLAGYANILAAEQKREQALDVLGLCLYHPETNSDTHRDIQLILEDLKKIRSDDIDAGLEHGKLLDMKEVVIKALGG*
Ga0074470_100829531	3300005836	Sediment (Intertidal)	LVGYANILAAEGKRVQALDVLGLCLHHPEINSDTRRDINIVLEDLRKVRADDIEAGLENGKLLDLKEVVVIALGG*
Ga0075295_10607422	3300005879	Rice Paddy Soil	FREAYASLREALQLNIENDSISWVLFSLVGYANILAGEGKRESALEILGLCMDHPETNSDTHRDIQLVLEDLRKLRSDDIEAGLARGKSLDLNKTVVMALGG*
Ga0079222_111399892	3300006755	Agricultural Soil	FSLVGFANILAAEGKRQTALQILGLCMHHPETNSDTHRDIQLVIEDLKKIGSDDIETGLETGRSLDLNKTVLMALGG*
Ga0075421_1004434031	3300006845	Populus Rhizosphere	QALQLNIENNSIAWILFSLVGYANILAAEGRRVQALEALGLCMYHPETNSDTRRDIQIVLEVLKKVRSDDIQAGLERGKSLDLNKMVVTALGG*
Ga0075430_1009889981	3300006846	Populus Rhizosphere	REAYASLREALQVNMENDSISWVLFSLVGYADILAAEGKRDQSLDVLGVCLHHPDTNSDTHRDIQIVLNDLKRARMDDIEVGLERGKLLEVKEVVIRALGG*
Ga0075430_1011430952	3300006846	Populus Rhizosphere	VSWILFSLVGYADILAAEGKREQSLNVLGLCMYHPETNSDTKRDIQLVLEGLRKIREDDIEAGLERGKLLDLNHAVITALGG*
Ga0075420_1012461562	3300006853	Populus Rhizosphere	QVGLGELREAYASLNEALQFNLENDSLSWVLFSLVGYANILAAEGKRTAALQILGLCMYHPETNSDTHRDIEIVLEDLKRAGSEDIEAELARGKSLDLNRTVVAALGG*
Ga0075420_1019375832	3300006853	Populus Rhizosphere	NIENDSVSWILFSLVGYANILAAEGKRQSALQILGLCMNHPETNSDTHRDIQLVLEDLKKVRLDDIETELEHGRPLDLNKTVLMALGG*
Ga0075424_1011102062	3300006904	Populus Rhizosphere	VGYANILAAEGKRESALEILGLCLNHPETNSDTHRDIQLVIEDLKKTRSDDIETGLERGKSLDLNKTVLMALGG*
Ga0079216_106962242	3300006918	Agricultural Soil	MPTPRSALQLNIENDSVSWILFSLVGFANILAAEGKRPSALQILGLCMHHPETNSDTHRDIQLVIEDLKKLRSDDIEAELENGRSLDLNKTVLMALGG*
Ga0079219_108420782	3300006954	Agricultural Soil	SVSWVLFSLVGYADILAAEGKRELALEVLGLCMNHPETNSDTRRDIQLVLDDLKKVRSDDIEGGLERGKLLDINKTVLMALGG*
Ga0075419_113692651	3300006969	Populus Rhizosphere	SIAWILFSLVGYANILAAEGKRVQALEALGSCLYHPETNSDTRRDIQIVLDVLKKVRSDDINAGLERGKSLDLNKMVITALGG*
Ga0111539_114941072	3300009094	Populus Rhizosphere	GEIRDAYASLRSALQLNIENDSVSWILFSLVGFANILAAEGKRQTALQILGLCMHHPETNSDTQRDIQLVIEDLRTLRSDDIETGLETGRSLDLNKTVLMALGG*
Ga0075418_121468261	3300009100	Populus Rhizosphere	REAYASLSEALQLNIENDSISWVLFSLVGYANILAAEGKRNSALQILGLCLYHPETNSDTHRDIQLILEDLKKVRSDDIEVELERGKSLDLNRTVVTALGG*
Ga0105247_118447582	3300009101	Switchgrass Rhizosphere	REAYVSLREALQLNIENDSISWVLFSLVGYANIIAGEGKRASALEILGMCMEHPETNSDTHRDIQLVLEDLRNVRSDDIEAGLERGKSLDLNKTVVMALGG*
Ga0114129_123689941	3300009147	Populus Rhizosphere	YASLRKALQLNTENDSVSWVLFSLVGYANILAAEGKRQLALQILGLCMHHPATNSDTHRDIQLVLEDLRKVRSDDIEAELERGRSLDLNKTVLMALGG*
Ga0075423_104108242	3300009162	Populus Rhizosphere	SLRSALQLNIENDSVSWVLFSLVGYADILAAEGKRELALEVLGLCTNHPETNSDTRRDIQLVLDDLKKVRSDDIEAGLEHGKLLDINKTVLMALGG*
Ga0075423_115297891	3300009162	Populus Rhizosphere	VYSQVGLGELREAYASLNEALQLNLENDSISWVLFSLVGYANILAAEGKRSSALEVLGLCMHHPETNSDTHRDIQLVLEDLKKVHLDDIEAELERGKSLDLNRTVVAALGG*
Ga0105242_130314671	3300009176	Miscanthus Rhizosphere	QLNIENDSVSWVLFSLVGYADILAAEGKRELALEVLGLCMNHPETNSDTRRDIQLVLDDLKKVRSDDIEAGLEHGKLLDINKTVLMALGG*
Ga0126307_107608662	3300009789	Serpentine Soil	LGELREAYASLREALQLNIENDSVSWVLFSLVGYANILAAEGKRQAALQILGLCLHHPETNSDTHRDIQLILEDLRKVESGDIEAELEDGRSLDLNKTVLMALGG*
Ga0126313_103683421	3300009840	Serpentine Soil	ISWVLFSLVGYANILAGQGKRDSALEILGLCMGHPETNSDTHRDIQLVLEDLRKVRSDDIEAGLERGKSLDLNKTVVMALGG*
Ga0131077_114669902	3300009873	Wastewater	ALQLNIENDLGSWIIFSLVGYAYVLRVEGQRERALRVLGACLHHPEANSDTHRDIQIILDEMKQERTDDIELELERGKSLDINKAVVMALGG*
Ga0126315_102852761	3300010038	Serpentine Soil	ILAAEGQRERALEILGLCRNHPEVNSDTRRDIQLLLDDLRKVHLVDIEAGLERGKSLDLSKAVIAALGG*
Ga0126315_109764092	3300010038	Serpentine Soil	SISWVLFSLVGYANILAAEGKRKSALQILGLCMHHPETNSDTHRDIQLVLEYLKKVRSDDIEVELERGKSLDLNRTVVTALGG*
Ga0126309_104940262	3300010039	Serpentine Soil	LNIENDSISWVLFSLVGYANILAAEGKRQAALQILGLCLAHPETNSDTHRDIQLILEDLRKVQSDDIDAELEDGRSLDLNKTVLMALGG*
Ga0126309_108883022	3300010039	Serpentine Soil	LNVEGDSTSWILFSLVGYANILAAEGERERALEILGFCLSHPEINSDTDRDILLLLDDLREVNSDDIDAALERGTTLNLNTVVLAALSG*
Ga0126312_101240321	3300010041	Serpentine Soil	QVGMGEIREAYASLRESLQLNVEGDSTSWILFSLVGYANILMAEGKRERALEILGLCLNHPELNSDTDRDIQLLLDDLRNARSDDIEAGLERGKSLNLNTAVVTALGG*
Ga0126312_114975242	3300010041	Serpentine Soil	SVSWVLFSLVGYTNILAAEGKRQLALQILGLCMHHPETNSDTHRDIQLVIEDLRKVRVDDIETGLETGRTLDLNKTVLMALGG*
Ga0126310_109835141	3300010044	Serpentine Soil	NVEGDSTSWILFSLVGYANIIVAEEKPERALEVLGLCVNHPELNSDTDRDIHLLLDDLRNARSDDIEAGLERGKSLNLNTAVVTALGG*
Ga0126306_109748801	3300010166	Serpentine Soil	QVGLGEIREAYVSVREALQFNVEGDSTSWILFSLVGYANILAAEGKRESAIEILGLCMNHPETNSDTHRDIQLVLEDLKKVQSDGVEAGLERGKSLDLNKIVVRALGG*
Ga0134127_126493282	3300010399	Terrestrial Soil	IENDSVSWVLFSLVGYADILAAEGKRELALEVLGLCMNHPETNSDTRRDIQLVLDDLKKVRSDDIEAGLEHGKLLDINKTVLMALGG*
Ga0134123_111053151	3300010403	Terrestrial Soil	NMENDSISWVLFSLVGYADILAAEGKRDQSLDVLGVCLQHPDTNSDTHRDIQIVLDDLKKARMEDIEVGLERGKLLEVKEVVIRALGG*
Ga0137443_12719992	3300011433	Soil	SLVGYANILVAEGKREQALATLGLCMYHPETNSDTHRDIQIVLENLKKVREDDIQAGLERGKSLDLKEVVVTALGG*
Ga0137464_12844721	3300011434	Soil	QLNLENDSISWVVFSLVGYADILAAEGKREQALNVLGLCMHHPETNSDTHRDIQIVLENLKKVRGDDIQAGLDQGKSMDLKEVVVTALGG*
Ga0120191_101551251	3300012022	Terrestrial	SVAWVLFSLVGYANILAAEGQRQLALQILGLCMHHPETTSDTHRDIQLVLEDLKQVRSDDIETELERGRSLDLNKIVLMALGG*
Ga0137350_10367222	3300012166	Soil	SWVVFSLVGYADILAAEGKRAQALSVLGLCLYHPETNSDTHRDIQIVLESLKKTGEDDIQAGLERDKTMELKDIVLTALGG*
Ga0137334_11270221	3300012179	Soil	WVVFSLVGYADILAAEGKRAQALSVLGLCLYHPETNSDTHRDIQIVLEILKKTGEDDIQAGLESGKTMELKDIVLTALGG*
Ga0137459_11584331	3300012228	Soil	ESLQLNMENDSVSWIIFSLVGYANILAAEGKREQALNVLGLCMHHPETNSDTRRDIQIVLEDLRKIRKDDIQAGLERGKSMDLKEVVVTALGG*
Ga0137465_10742051	3300012231	Soil	NLENDAISWVVFSLVSYANILAAEGKREQALNVLGLCMHHPETNSDTHRDIQIVLENLKKVRGDDIQAGLDQGKSMDLKEVVVTALGG*
Ga0137369_102996102	3300012355	Vadose Zone Soil	SWILFSLVGYANILVAEGKRERALEILGLCMNHPEINSDTHRDIQLVLDDLKKVRSDDIEAGLERGKSLDLNKTVVAALGG*
Ga0157291_101406112	3300012902	Soil	RSALQLNIENDSVSWILFSLVGFANILAAEGRRQTALQILGLCTHHPETNSDTQRDIQLVIEDLRTLRSDDIETGLEAGRSLDLNKTVLMALGG*
Ga0164305_115559541	3300012989	Soil	NIENDSVSWVLFSLVGYADILAAEGKRELALEVLGLCTNHPETNSDTRRDIQLVLDDLKKVRSDDIEAGLEHGKLLDINKTVLMALGG*
Ga0120188_10210281	3300013760	Terrestrial	EAYTSLRTALQLNMENDSVSWVLFSLVGYANILAAEGKRQLALPVLGLCMHHPETNSDTQRDIQLVLEELRKVGSDDIEAELERGKSLDLSRTVLKALGA*
Ga0075325_10817262	3300014270	Natural And Restored Wetlands	ALQLNLENDSISWVLFSLVGYANILASEGKRTSALQILGLCLVHPETNSDTHRDIQLVLEDLRKVRSDDIEVELARGKSLDLNRTVVAALGG*
Ga0180084_11014732	3300014874	Soil	AWILFSLVGYANILAAEGKRGQALETLGLCIYHPDTNSDTRRDIQIVLDDMKKVRADDIDVGLERGKSLDLNKVVVTALGG*
Ga0180104_11864512	3300014884	Soil	ASLRESLQLNLENDSISWVVFSLVGYADILAAEGKREQALNVLGLCMHHPETNSDTHRDIQIVLENLKKIRDDDIQAGLERGKTMELKDIVLTALGG*
Ga0184621_102766562	3300018054	Groundwater Sediment	REAYASLSEALQLNIENDSISWVLFSLVGYANILAAEGKRTSALQILGLCMYHPETNSDTHRDIQLVLEDLKKVRSDDIEVELEHGKSLDLNKTVVTALGG
Ga0184615_106936522	3300018059	Groundwater Sediment	SLREAVQLNIENDSVSWVIFSLVGYANILAAEGKRQSALQILGLCLHHPETNSDTHRDIQLILEDLKKVRSDDIEIELEDGRSLDLNKTVLMALGG
Ga0184625_105040772	3300018081	Groundwater Sediment	VGYANILVAEGKRESALEILGLCINHPETNSDTHRDIQLVLEDLKKVRSDDIEAGLEQGKLLDINKTVLMALGG
Ga0190273_119272732	3300018920	Soil	YANILAAEGRRERALEILGLCKFHPETNSDTHRDIELVLDDLEKTHTDDIEAGLERGRSLDLKQAVITALGG
Ga0193739_11296511	3300020003	Soil	LGELREAYASLSEALQLNIENDSVSWVLFSLVGYANILTAEGKRKSALQILGLCMYHPETNSDTHRDIQLVLEDLKKVRSDDIEVELEHGKSLDLNKTVVTALGG
Ga0210377_101349892	3300021090	Groundwater Sediment	LQLNIENDSVSWVLFSLVGYANILTAEGKRNSALQILGLCMYHPETNSDTHRDIQLVLEDLKKVRSDDIEVELERGKSLDLNKTVVTALGG
Ga0210377_101691452	3300021090	Groundwater Sediment	ASLWESLQLNVEGDSTSWILFSLVGYANILIAEGERERALGILGLCMNHPELNSDTNRDIQLLLDDLRKVHSEDIEAALERGKSLNLNTIVVTALGG
Ga0210324_11390192	3300021333	Estuarine	ALQLNMENDSISWVLFSLVGYADILAAEGKREQALDVLGLCVNHPETNSDTRRDILIVLDTLKAVRTDDIEAGLEHGKSLDLKEVVVTALGG
Ga0196962_100029011	3300024430	Soil	VSWVLFSLVGYANILVAEGKRQSALQILGLCLNHPETNSDTHRDIQLVLEDLKKVRSDDIETELEHGRSLDLNKTVLMALGG
Ga0210083_10253111	3300025521	Natural And Restored Wetlands	LGEIREAYATLREALQLNVEGNSVSWILFSLVGYANILTAEGQREQALEILGLCMNHPETNSDTHRDIHLVLEDLKKVRSDDVEAGLERGKLLDLNKTVVTALGA
Ga0207670_115467362	3300025936	Switchgrass Rhizosphere	LREALQLNVEGDSTSWILFSLAGYANILVVEGKRERALEILGFCLGHPEINSDTDRDILLLLDDLRKTGADDIDATLERGTALNLNAVVLAALGG
Ga0207674_102246101	3300026116	Corn Rhizosphere	NILAAEGKRKAALQILGLCMNHPETNSDTHRDIQLVLQDLRKIRSDDVEEELERGKSLEVNKTVLMALGG
Ga0207675_1006334252	3300026118	Switchgrass Rhizosphere	LRSALQLNIENDSVSWILFSLVGFANILAAEGKRQAALQILGLCMHHPETNSDTHRDIQLVIEDLKKIGSDDIETGLEAGRSLDLNKTVLMALGG
Ga0210000_10304672	3300027462	Arabidopsis Thaliana Rhizosphere	YSQVGLGETRDAYASVREALQFNIEGDSTSWILFSLVSYANILAAEGKREHALEVLGLCMNHPETNSDTHRDIKLVLEDLKKVRSDDIDAGLERGKSLDIKDVVITALGG
Ga0209814_101615762	3300027873	Populus Rhizosphere	GYANILASEGKRESALEILGMCLNHPETNSDTHRDIQLVLEDLRKVRSDDIEAGLERGKLLDMNKTVLMALGG
Ga0209382_101484451	3300027909	Populus Rhizosphere	ILAAEGKREQALDVLGLCLHHPETNSDTNRDIQIVLEDLKKTRTDDIEAGLERGKLLDLKELVVRALGG
Ga0209382_112227071	3300027909	Populus Rhizosphere	SLREALQVNMENDSISWVLFSLVGYADILAAEGKRDQSLDVLGVCLHHPDTNSDTHRDIQIVLNDLKRARMDDIEVGLERGKLLEVKEVVIRALGG
(restricted) Ga0233418_100679472	3300027995	Sediment	IREAYASVREALQLNIENNLTSWILFSLVGYANILAAEGRREQALQVLGLCKNHPETNSDTHRDIQIILDELKQVKTDDIEAGLERGKSLELNKAVLSALGG
Ga0268265_119430741	3300028380	Switchgrass Rhizosphere	ILVAEGKGESALEILGLCINHPETNSDTQRDIQLVLEDLKKVRSDDIEAGLERGKLLDINKTVLMALGG
Ga0299913_119658382	3300031229	Soil	YANILAAEGKRQSALQVLGLCMYHPETNSDTHRDIQLVLEDLKQVRSDDIEVELERGKSLELNRTVVAALGG
Ga0247727_109859972	3300031576	Biofilm	EMRAAYATVREALQLNIENNSIAWILFSLVGYANILAAEGKRAQSLETLGLCMYHPDTNSDTRRDIQIVLDDMKKVRADDLDAGLERGKSLDLNKMVVTALGG
Ga0307405_113894141	3300031731	Rhizosphere	ILAAQGKRQTALQILGLCMHHPETNSDTHRDIQLVIEDLRKLRSDDIETGLEAGRSLNLNKMVLMALGG
Ga0307410_119837711	3300031852	Rhizosphere	SQVGLGELREAYASLTEALQLNLENDSISWVLFSLVGYANILAAQGKRASALQVLGLCMHHPETNSDTHRDIRLVLEDLKKVGADDIDVELERGKTLDLNRTVVAALGG
Ga0214473_115854752	3300031949	Soil	ILAAEGKRQSALQILGLCLHHPETNSDTHRDIQLILEDLKKVRSDDIETELEEGRLLDLNKTVLMALGG
Ga0307416_1001634101	3300032002	Rhizosphere	SQVGLGEIREAYASLRSALQLNIENDSVSWILFSLVGFANILAAQGKRQTALQILGLCMHHPETNSDTHRDIQLVIEDLRKLRSDDIETGLEAGRSLNLNKMVLMALGG
Ga0315912_108058311	3300032157	Soil	DSISWILFSLVGYADILAAEGKRTQALNVLGLCLNHPETNSDTHRDIQIVLESLKKNGEADIEAGLANGKNMELKDIVIAALGG
Ga0370490_0239031_4_243	3300034128	Untreated Peat Soil	VLFSLVGYANILAAEGKRKSALQILGLCLVHPETNSDTHRDIQLVLEDLQKLHSDDIEMELERGKSLDLNRTVVAALGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters