Metagenome Family F093668

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093668
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	61 residues
Representative Sequence	MPTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSNFLDAFTRLKSPAR
Number of Associated Samples	68
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	45.28 %
% of genes near scaffold ends (potentially truncated)	23.58 %
% of genes from short scaffolds (< 2000 bps)	94.34 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (80.189 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (33.962 % of family members)
Environment Ontology (ENVO)	Unclassified (41.509 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.057 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.95% β-sheet: 28.41% Coil/Unstructured: 63.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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SCOP family	SCOP domain	Representative PDB	TM-score
b.34.1.2: FeoA-like	d6e55a1	6e55	0.73137
d.3.1.1: Papain-like	d2cb5a_	2cb5	0.72833
d.3.1.15: CHAP domain	d2io8a2	2io8	0.72482
e.80.1.1: CRISPR-associated endonuclease Cas9/Csn1, PAM-interacting (PI) domain	d4ogca4	4ogc	0.72186
d.3.1.3: Calpain large subunit, catalytic domain (domain II)	d1tl9a_	1tl9	0.71848

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF09361	Phasin_2	19.81
PF02518	HATPase_c	1.89
PF04226	Transgly_assoc	0.94
PF07690	MFS_1	0.94
PF13546	DDE_5	0.94
PF00561	Abhydrolase_1	0.94
PF01479	S4	0.94
PF13384	HTH_23	0.94
PF01165	Ribosomal_S21	0.94
PF08388	GIIM	0.94
PF00583	Acetyltransf_1	0.94
PF00753	Lactamase_B	0.94
PF01227	GTP_cyclohydroI	0.94
PF13751	DDE_Tnp_1_6	0.94
PF13737	DDE_Tnp_1_5	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.94
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.19 %
All Organisms	root	All Organisms	19.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.19 %
cellular organisms	root	All Organisms → cellular organisms	19.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.19 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	19.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.98 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.19 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.09 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.19 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.38 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.19 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2.83 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.89 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.94 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.94 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.19 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.89 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1.89 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.94 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.94 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.19 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	1.89 %
Methylobacterium isbiliense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium isbiliense	1.89 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.94 %
Actinocatenispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora	0.94 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.19 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	1.89 %
Methylobacterium isbiliense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium isbiliense	1.89 %
Sinorhizobium saheli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium saheli	0.94 %
Actinocatenispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora	0.94 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001305\|C688J14111_10029348	All Organisms → cellular organisms → Bacteria	1637	Open in IMG/M
3300001686\|C688J18823_10382568	Not Available	913	Open in IMG/M
3300001686\|C688J18823_10481746	Not Available	797	Open in IMG/M
3300002568\|C688J35102_119830555	Not Available	787	Open in IMG/M
3300004153\|Ga0063455_100473577	Not Available	769	Open in IMG/M
3300004479\|Ga0062595_102190403	Not Available	541	Open in IMG/M
3300004479\|Ga0062595_102296505	Not Available	532	Open in IMG/M
3300005329\|Ga0070683_101052238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	781	Open in IMG/M
3300005340\|Ga0070689_101728644	Not Available	569	Open in IMG/M
3300005355\|Ga0070671_100651721	Not Available	912	Open in IMG/M
3300005440\|Ga0070705_101423914	Not Available	578	Open in IMG/M
3300005455\|Ga0070663_101577229	Not Available	585	Open in IMG/M
3300005544\|Ga0070686_101636962	Not Available	545	Open in IMG/M
3300005562\|Ga0058697_10153576	Not Available	1008	Open in IMG/M
3300005616\|Ga0068852_100339974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1463	Open in IMG/M
3300005616\|Ga0068852_101222311	Not Available	773	Open in IMG/M
3300005719\|Ga0068861_100077872	All Organisms → cellular organisms → Bacteria	2588	Open in IMG/M
3300005834\|Ga0068851_10671762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium isbiliense	636	Open in IMG/M
3300005840\|Ga0068870_11273506	Not Available	535	Open in IMG/M
3300006046\|Ga0066652_100956523	Not Available	815	Open in IMG/M
3300006755\|Ga0079222_11971262	Not Available	573	Open in IMG/M
3300006894\|Ga0079215_10623811	Not Available	709	Open in IMG/M
3300007004\|Ga0079218_13127496	Not Available	559	Open in IMG/M
3300009098\|Ga0105245_10825769	Not Available	966	Open in IMG/M
3300009101\|Ga0105247_11391898	Not Available	567	Open in IMG/M
3300009176\|Ga0105242_11272767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	758	Open in IMG/M
3300009177\|Ga0105248_12960944	Not Available	541	Open in IMG/M
3300009789\|Ga0126307_10417984	Not Available	1081	Open in IMG/M
3300009789\|Ga0126307_11744708	Not Available	506	Open in IMG/M
3300009840\|Ga0126313_10199375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1535	Open in IMG/M
3300009840\|Ga0126313_11141418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium saheli	641	Open in IMG/M
3300009840\|Ga0126313_11296612	Not Available	602	Open in IMG/M
3300010036\|Ga0126305_10229727	Not Available	1186	Open in IMG/M
3300010036\|Ga0126305_10324932	Not Available	1003	Open in IMG/M
3300010036\|Ga0126305_11283095	Not Available	505	Open in IMG/M
3300010037\|Ga0126304_10025292	All Organisms → cellular organisms → Bacteria → Proteobacteria	3440	Open in IMG/M
3300010037\|Ga0126304_10718871	Not Available	675	Open in IMG/M
3300010037\|Ga0126304_10793137	Not Available	642	Open in IMG/M
3300010038\|Ga0126315_10425579	Not Available	838	Open in IMG/M
3300010038\|Ga0126315_10989365	Not Available	563	Open in IMG/M
3300010039\|Ga0126309_10015744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	3215	Open in IMG/M
3300010039\|Ga0126309_10454506	Not Available	778	Open in IMG/M
3300010039\|Ga0126309_10491974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium isbiliense	753	Open in IMG/M
3300010039\|Ga0126309_10990190	Not Available	564	Open in IMG/M
3300010039\|Ga0126309_11100920	Not Available	540	Open in IMG/M
3300010040\|Ga0126308_10929427	Not Available	607	Open in IMG/M
3300010040\|Ga0126308_11019971	Not Available	580	Open in IMG/M
3300010040\|Ga0126308_11139376	Not Available	550	Open in IMG/M
3300010041\|Ga0126312_10069764	Not Available	2368	Open in IMG/M
3300010041\|Ga0126312_10664205	Not Available	751	Open in IMG/M
3300010041\|Ga0126312_11010904	Not Available	609	Open in IMG/M
3300010042\|Ga0126314_10584943	Not Available	814	Open in IMG/M
3300010042\|Ga0126314_10974164	Not Available	629	Open in IMG/M
3300010044\|Ga0126310_10338706	Not Available	1050	Open in IMG/M
3300010044\|Ga0126310_11234275	Not Available	601	Open in IMG/M
3300010044\|Ga0126310_11583836	Not Available	540	Open in IMG/M
3300010045\|Ga0126311_10269593	Not Available	1270	Open in IMG/M
3300010045\|Ga0126311_10770394	Not Available	774	Open in IMG/M
3300010045\|Ga0126311_11068664	Not Available	663	Open in IMG/M
3300010045\|Ga0126311_11234966	Not Available	619	Open in IMG/M
3300010166\|Ga0126306_10226000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1421	Open in IMG/M
3300010166\|Ga0126306_10237426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1387	Open in IMG/M
3300010166\|Ga0126306_11265556	Not Available	608	Open in IMG/M
3300010375\|Ga0105239_11727527	Not Available	725	Open in IMG/M
3300010397\|Ga0134124_10986543	Not Available	853	Open in IMG/M
3300010403\|Ga0134123_10129353	Not Available	2057	Open in IMG/M
3300011119\|Ga0105246_10526706	Not Available	1008	Open in IMG/M
3300012212\|Ga0150985_100798840	Not Available	500	Open in IMG/M
3300012212\|Ga0150985_101731771	Not Available	513	Open in IMG/M
3300012212\|Ga0150985_104251919	Not Available	897	Open in IMG/M
3300012212\|Ga0150985_104630514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1176	Open in IMG/M
3300012212\|Ga0150985_105034898	Not Available	687	Open in IMG/M
3300012212\|Ga0150985_105594169	Not Available	514	Open in IMG/M
3300012212\|Ga0150985_113707873	Not Available	571	Open in IMG/M
3300012212\|Ga0150985_122775434	Not Available	710	Open in IMG/M
3300012212\|Ga0150985_122814293	Not Available	568	Open in IMG/M
3300012469\|Ga0150984_121405697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1036	Open in IMG/M
3300012469\|Ga0150984_123037779	Not Available	537	Open in IMG/M
3300012502\|Ga0157347_1071064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300012955\|Ga0164298_11674782	Not Available	504	Open in IMG/M
3300012977\|Ga0134087_10194015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	906	Open in IMG/M
3300013296\|Ga0157374_12773167	Not Available	518	Open in IMG/M
3300013307\|Ga0157372_12304212	Not Available	618	Open in IMG/M
3300013308\|Ga0157375_13172303	Not Available	548	Open in IMG/M
3300014497\|Ga0182008_10504205	Not Available	666	Open in IMG/M
3300014745\|Ga0157377_10763722	Not Available	709	Open in IMG/M
3300015372\|Ga0132256_103196575	Not Available	551	Open in IMG/M
3300017659\|Ga0134083_10279517	Not Available	704	Open in IMG/M
3300017792\|Ga0163161_10091978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2246	Open in IMG/M
3300019767\|Ga0190267_11126230	Not Available	567	Open in IMG/M
3300019767\|Ga0190267_11483578	Not Available	521	Open in IMG/M
3300025901\|Ga0207688_10330778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	936	Open in IMG/M
3300025907\|Ga0207645_10551136	Not Available	782	Open in IMG/M
3300025924\|Ga0207694_11656493	Not Available	539	Open in IMG/M
3300025927\|Ga0207687_11772943	Not Available	529	Open in IMG/M
3300025933\|Ga0207706_10497817	Not Available	1052	Open in IMG/M
3300025942\|Ga0207689_10917457	Not Available	739	Open in IMG/M
3300025972\|Ga0207668_10776615	Not Available	847	Open in IMG/M
3300026023\|Ga0207677_10666639	Not Available	920	Open in IMG/M
3300026035\|Ga0207703_11763486	Not Available	595	Open in IMG/M
3300026067\|Ga0207678_10176102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora	1826	Open in IMG/M
3300026067\|Ga0207678_10987449	Not Available	745	Open in IMG/M
3300026142\|Ga0207698_12510198	Not Available	525	Open in IMG/M
3300028380\|Ga0268265_10824898	Not Available	906	Open in IMG/M
3300032126\|Ga0307415_102584669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	501	Open in IMG/M
3300032159\|Ga0268251_10246248	Not Available	721	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	54.72%
Host-Associated	Host-Associated	45.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.72%
Plants	Host-Associated → Plants	45.28%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.81%
Phylloplane	Host-Associated → Plants → Phylloplane	1.89%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.43%
Loam	Environmental → Terrestrial → Soil → Loam	8.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.49%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.49%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.77%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.94%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	33.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	8.49%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.89%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J14111_100293481	3300001305	Soil	LWKHNSTRVIVVAVSPNTVTYEDLSGPAGVTRDSLSNFRTAFTRLKRPAR*
C688J18823_103825681	3300001686	Soil	MRIERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSGPAGVTRDSLSNFLAGFTRLTRPAR
C688J18823_104817462	3300001686	Soil	MPTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLPGRAGVTRDSLSNFLDAFTXLKSPAR
C688J35102_1198305551	3300002568	Soil	TLVVDVPDSYSMRMETEPLHTERPYPGQIWKHDSIRILVVAAHQNTVTYEDLSGRAGVTRDSLSNFLAVFKRLKSPAR*
Ga0063455_1004735771	3300004153	Soil	MPTERPYPGQLWKHDAARVIIVAVSPTTVTYEDLSGAKGVTRDSLNAFLSVFKRLRR*
Ga0062595_1021904031	3300004479	Soil	MPTERPYPGQLWKHDAARVIIVAVSPTTVTYEDLSGAKGVTRDSLNDFLSVFKRLRR*
Ga0062595_1022965051	3300004479	Soil	MRTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLPRRAGVTRDSLSNFLGSFTRLTRPAR
Ga0070683_1010522383	3300005329	Corn Rhizosphere	MEAELMPTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDTLSNFLDA
Ga0070689_1017286441	3300005340	Switchgrass Rhizosphere	MPTERPYPGQLWKHDSIRVIVVAVGPNTVTYEDLSGRAGVTRDSLSNFLAGFTRLKSPAR
Ga0070671_1006517213	3300005355	Switchgrass Rhizosphere	YPGQLWKHDSIRVIVVGVSPNTVTYEDLSRRAGVTRDSLSNFLTGFTRLKSPAR*
Ga0070705_1014239141	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPTERPFPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSNFLDAFTRLKSPAR
Ga0070663_1015772291	3300005455	Corn Rhizosphere	MKTDLMPAERPYLGQLWKHDSIRVIVVAVSPNTVTYEDLSGRAGVTRDSLSNFLTGFIRLKSPAR*
Ga0070686_1016369621	3300005544	Switchgrass Rhizosphere	MKTELMLAERPYPGQLWKHDSIRVIVVGVSPNTVTYEDLSRRAGVTRDSLSNFLTGFTRLKSPVR*
Ga0058697_101535762	3300005562	Agave	METELMPTEGPYPGQLWKHDSIRVIVVAVRPNTVTYEDLSRRAGVTRDSLSNFLTGFIRLKSPTR*
Ga0068852_1003399742	3300005616	Corn Rhizosphere	MRTERPYPGQLWKHDSIRVIVVAVGPNTVTYEDLSGRAGVTRDSLSNFLAGFTRLTSPVR
Ga0068852_1012223112	3300005616	Corn Rhizosphere	METELMLAERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSNFLDAFTRLKSPAR*
Ga0068861_1000778721	3300005719	Switchgrass Rhizosphere	MPTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSGRAGVTRDSLSNFLTGFIRLKSPAR
Ga0068851_106717621	3300005834	Corn Rhizosphere	MRTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSNFL
Ga0068870_112735061	3300005840	Miscanthus Rhizosphere	METELMPTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSGRAGVTRDSLSNFLTGFTRLKSPVR*
Ga0066652_1009565232	3300006046	Soil	METELMLTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSTFLDAFTKLKSAAR*
Ga0079222_119712622	3300006755	Agricultural Soil	RPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSNFLDAFTKLKSPAP*
Ga0079215_106238112	3300006894	Agricultural Soil	MRTERPYPGQLWKHDSIRVIVVAVGPNTVTYEDLSGPAGVTRDSLSNFLAGFTRLKSPAR
Ga0079218_131274962	3300007004	Agricultural Soil	MRTERPYPGQLWKHDSIRVIVVAVGPNTVTYEDLSGRAGVTRDSLSNFLAGFTRLKSPAR
Ga0105245_108257692	3300009098	Miscanthus Rhizosphere	METELMPTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSNFLTGFIRLKSPAR*
Ga0105247_113918981	3300009101	Switchgrass Rhizosphere	MPTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSNFLDAFTRLKSPAR
Ga0105242_112727672	3300009176	Miscanthus Rhizosphere	MEAELMPTERPFPGQLWKHDSIRVIVVGVSPNTVTYEDLSRRAGVTRDSLSTFLDAFTRLKSPAR*
Ga0105248_129609442	3300009177	Switchgrass Rhizosphere	METELMLTERPYPGQLWKHDSIRVIVVAVRPNTVTYEDLSRRVGVTRDSLSNFLAGFTRLKSPVR*
Ga0126307_104179843	3300009789	Serpentine Soil	MEPDLMRTERPYPGQLWKHDNIRVIVVGVSPNTVTYEDLSGPAGVTRDSLSNFLAGFTRLKSPAR*
Ga0126307_117447081	3300009789	Serpentine Soil	MEIELMPIERPYPGQLWKHDSTRVIVVAVSPNTVTDEDLSGRAGVTRDSLSNFLDAFRRLKSPARQ*
Ga0126313_101993752	3300009840	Serpentine Soil	VETELMYAERPYPGQLWKHDSICVIVIAVSPNTVTYEDLSRRAGVTRDSLSNFLDAFTKLKSPAR*
Ga0126313_111414181	3300009840	Serpentine Soil	MRTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRPTGVTRDSLSNFLAGFTRLKSPAR
Ga0126313_112966121	3300009840	Serpentine Soil	MRTEQPYPGQLWKHDSIRVIVVAVGPNTVTYEDLSRPTGVTRDSLGNFLAGFTRLKSPAR
Ga0126305_102297272	3300010036	Serpentine Soil	MRTERPYPGQLWKHDSLRVIVVAVSPNTVTYEDLSGRAGVTRDSLSNFLAGFTRLKSPVR
Ga0126305_103249323	3300010036	Serpentine Soil	MRTERPYPGQLWKHDSIRVIVVAVGPNTVTYEDLSRPAGVTRDSLSNFLAGFTRLKSPAR
Ga0126305_112830951	3300010036	Serpentine Soil	METELMLTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSGRAGVTRDSLSNFLAGFTRLKSP
Ga0126304_100252924	3300010037	Serpentine Soil	MRTEQPYPGQLWKHDSICVIVVAVSPNTVTYEDLSRRAGVTRDSPSNFLAGFTRLKSPAR
Ga0126304_107188712	3300010037	Serpentine Soil	MRTERPYPGQLWKHDSLRVIVVAVSPNTVTYEDLSGRAGVTRDSLSNFLAGFTRLTSPAR
Ga0126304_107931371	3300010037	Serpentine Soil	MDTEPMRTERPYPGQLWKHDSIRVIVVAVGPNTVTYEDLSGRAGVTCDSLSNFLAGFTRLKSPAR*
Ga0126315_104255792	3300010038	Serpentine Soil	METELMPIERPYPGQLWKHDSTRVIVVAVSPNTVTYEDLSEPAGVTRDSLSNFLDAFRRLKSPARQ*
Ga0126315_109893651	3300010038	Serpentine Soil	KHDSIRVIVVAVSPNTVTYEDLSKGAGVTRDSLSNFLAGFTRLKSPAR*
Ga0126309_100157442	3300010039	Serpentine Soil	METELMRTEQPYPGQLWKHGSIRVIVVATSPNTVTYEDLSGAAGVTRDNLSTFLTVYARPKSPTR*
Ga0126309_104545061	3300010039	Serpentine Soil	MMPIERPYPGQLWKYDATQVIIVAVSPTTVTYEDLSGAKGATRESLKDFLAQFRRLRR*
Ga0126309_104919742	3300010039	Serpentine Soil	MEPDLMRTEQPYPGQLWKHDSIRVIVVAVGPNTVTYEDLSGRAGVTRDSLRNFLAGFTRLKSPAR*
Ga0126309_109901902	3300010039	Serpentine Soil	MPTERPYPGQLWKHDSLRVIVVAVSPNTVTYEDLSRPAGVTRDSLSNFLDAFTRLTRPAR
Ga0126309_111009201	3300010039	Serpentine Soil	MRTEQPYPGQLWKHDSIRVIVVATSPNTVTYEDLSRRTGVTRDSLRNFLSGFTRLKSPAR
Ga0126308_109294271	3300010040	Serpentine Soil	MDTEPIRTERPYPGQLWKHDSIRVIVVAVGPNTVTYEDLSGRAGVTRDSLRNFLAGFTRLKSPAR*
Ga0126308_110199711	3300010040	Serpentine Soil	MRTEQPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSERAGVTRDSLSNFLDGFTKLKSPAR
Ga0126308_111393762	3300010040	Serpentine Soil	MPTERPYPGQLWKHDSIRVIVVAVSPNTVTYENLSGPAGVTRDSLSNFRTTFTRLKRPAW
Ga0126312_100697643	3300010041	Serpentine Soil	MEPDLMRTEQPYPGQLWKHDNIRVIVVGVSPNTVTYEDLSGPAGVTRDSLSNFLAGFTRLKSPAR*
Ga0126312_106642052	3300010041	Serpentine Soil	MRTEQPYPGQLWKHDSIRVIVVAVGPNTVTYEDLSRPAGVTRDSLSNFLAGFTRLKSPAR
Ga0126312_110109041	3300010041	Serpentine Soil	METELMPIERPYPGQLWKHDSTRVIVVAVSPNTVTYEDLSGRAGVTRDSLSNFLTGFIRLKSPARQ*
Ga0126314_105849431	3300010042	Serpentine Soil	MPTERPYPGQLWKHDTIRVIVVAVSPNTVTYEDLSGRAGVTRDSLSNFLAGFTRLKSPVW
Ga0126314_109741641	3300010042	Serpentine Soil	METELMYAERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSGRAGVTRDSLSNFLTGFIRLKSPAR*
Ga0126310_103387062	3300010044	Serpentine Soil	MHTERPYPGQLWKHDSIRVIVVAVSSNTVTYEDLSEPAGVTRDSLSNFLDAFTRLTRPAR
Ga0126310_112342751	3300010044	Serpentine Soil	HREEGINFDRDLTEYGPDLMRTERPYPGQLWKHDSLRVIVVAVSPNTVTYEDLSGRAGVTRDSLSNFLAGFTRLTSPVR*
Ga0126310_115838361	3300010044	Serpentine Soil	PGQLCKHDSTRVIVVAVSPNTVTYEDLSGRAGVTRDSLSNFLDAFRRLKSPAR*
Ga0126311_102695931	3300010045	Serpentine Soil	MRTERPYPGQLWKHDSLRVIVVGVSPNTVTYEDLSGRARVTRDSLSNFLAGFTRLTRPAR
Ga0126311_107703942	3300010045	Serpentine Soil	VETELMYAERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSNFLDAFTRLKSPAR*
Ga0126311_110686642	3300010045	Serpentine Soil	MRTERPYPGQLWKHDSLRVIVVAVSPNTVTYEDLSGRAGVTRDSLSNFLAGFTRLKSP
Ga0126311_112349661	3300010045	Serpentine Soil	MHAERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSGRAGVTRDSLSNFLDAFTRLKSPAR
Ga0126306_102260001	3300010166	Serpentine Soil	MRTERPYPGQLWKHDSLRVIVVAVSPNTVTYEDLSGRAGVTRDSLSNFLAGFTRLKSPTR
Ga0126306_102374263	3300010166	Serpentine Soil	MRTERPYPGQLWKHDSLRVIVVAVSPNTVTYEDLSGRAGVTRDSLSNFLAGFTRLTSPVR
Ga0126306_112655561	3300010166	Serpentine Soil	QLWKHNSLRVIVVAVSPNIVTYEDLSGRAGVTRDSLSNFLAGFTRLKSPAR*
Ga0105239_117275272	3300010375	Corn Rhizosphere	MPTERPYPGQLWKHDSIRVIVVAASPNTVTYEDLSRRAGVTRDSLSTFLDAFTRLKSPAR
Ga0134124_109865432	3300010397	Terrestrial Soil	MEAELMPTERPFPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSNFLDAFTRLKSPAR*
Ga0134123_101293533	3300010403	Terrestrial Soil	MRTERPYPGQLWKHDSLRVIVVAVRPNTVTYEDLSGRAGVTRDSLSNFLTGFTKLKSPAR
Ga0105246_105267061	3300011119	Miscanthus Rhizosphere	METELMLAERPYPGQLLKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSNFL
Ga0150985_1007988402	3300012212	Avena Fatua Rhizosphere	VRTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSGPAGVTRDSLSNFRTTFTRLKRPAW
Ga0150985_1017317712	3300012212	Avena Fatua Rhizosphere	YPGQLWKHDSIRVIVVAVSPNTVTYEDLSGPAGVTRDSLSNFLDAFTRLTRPAR*
Ga0150985_1042519192	3300012212	Avena Fatua Rhizosphere	MRTERPYPGQLWKHDSLRVIVVAVSPNTVTYEDLSGRAGVTRDSLSNFLTGFTRLKSPVR
Ga0150985_1046305143	3300012212	Avena Fatua Rhizosphere	METELMYAERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSGRAGVTRDSLSNFLDAFTRLQSPAR*
Ga0150985_1050348981	3300012212	Avena Fatua Rhizosphere	IDLDSYIADMESDLMRTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSGPAGVTRDSLSNFLAGFTRLTGPAR*
Ga0150985_1055941691	3300012212	Avena Fatua Rhizosphere	QLWKHDSIRVIVVAVSPNTVTFEDLSRRAGVTRDSLSNFLAGFTRLKSPAR*
Ga0150985_1137078731	3300012212	Avena Fatua Rhizosphere	MDTKPIRTERPYPGQLWKHDSIRIIVVAVHQNTVTYEDLSGPAGVTRDNLSSFLTVFKRLRSPSR*
Ga0150985_1227754342	3300012212	Avena Fatua Rhizosphere	MPTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLPGRAGVTRDSLSNFLDAFTRLKSPAR
Ga0150985_1228142931	3300012212	Avena Fatua Rhizosphere	VHTERAYPGQLWKHGSIRVIVVAVGPNSVTYEDLSEPKGITRASLPDFLAVFTRLKRVTG
Ga0150984_1214056973	3300012469	Avena Fatua Rhizosphere	MESDLMRTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSGPAGVTRDSLSNFL
Ga0150984_1230377791	3300012469	Avena Fatua Rhizosphere	METELMLAERPYPGQLWKHDSIRVIVVGVSPNTVTYEDLSRRAGVTRDSLRNFLAGFTRRKSPAR*
Ga0157347_10710641	3300012502	Arabidopsis Rhizosphere	LPPSPHSQFANGIRPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDTLSNFLDAFTRLKSPAR*
Ga0164298_116747821	3300012955	Soil	LVTERPYPGQLWKHGSIRVIITAVGPSTVTYEDLSDPKGMTRVHLPDFLAVFARLKRVTG
Ga0134087_101940151	3300012977	Grasslands Soil	METELMLTERPYPGQLWKHDSIRVIVVAVNPNTVTYEDLSRRTGVTRDTLSNFLDAFTRLKSPAR*
Ga0157374_127731672	3300013296	Miscanthus Rhizosphere	MKTELMLAERPYPGQLWKHDSIRVIVVGVSPNTVTYEDLSRRAGVTRDSLSTFLDAFTRLKSPAR
Ga0157372_123042121	3300013307	Corn Rhizosphere	MPTERPYPGQLWKHDSIRVIVVAVSPDTVTYEDLSRRAGVTRDSLSTFLTGFIRLKSPAR
Ga0157375_131723031	3300013308	Miscanthus Rhizosphere	PGQLWKHDSLRVIVVAVRPNTVTYEDLSGRAGVTRDSLSNFLTGFTRLKSPVR*
Ga0182008_105042052	3300014497	Rhizosphere	MPTERPYPGQLWKHDSIRVIVVAVSPDTVTYEDLSGRAGVTHDSLSNFLTGFIRLKSPTR
Ga0157377_107637222	3300014745	Miscanthus Rhizosphere	MRTEWPYPGQIWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDTLSNFLDAFTRLKSPAR
Ga0132256_1031965752	3300015372	Arabidopsis Rhizosphere	MPTERPYPGQLWKHDSIRVIIVAVSPNTVTYEDLSGRAGVTRDSLSTFLDAFTRLKSPAR
Ga0134083_102795172	3300017659	Grasslands Soil	MRTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSNFLDAFTRLTRPAR
Ga0163161_100919781	3300017792	Switchgrass Rhizosphere	MLTERPYPGQLWKHDSIRVIVVGVSPNTVTYEDLSRRAGVTRDSLSNFLTGFIRLKSPAR
Ga0190267_111262302	3300019767	Soil	METDLMRTERPYPGQLWKHDSIRVIVVAVGPNTVTYEDLSRGAGVTRDSLSNFLDGFSRLKSPTR
Ga0190267_114835781	3300019767	Soil	MRTERPYPGQLWKHDSLRVIVVAVSPNTVTYEELSGPTGVTRDSLSNFLEGFTRLTRPA
Ga0207688_103307784	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MPTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSNFLAGFIRLKSPAR
Ga0207645_105511362	3300025907	Miscanthus Rhizosphere	LPPCCDFANGVRPFPGQLWKHDSIRVIVVAVSPNTVTYEDLSGRAGVTRDSLSNFLDAFTRLKSPAR
Ga0207694_116564931	3300025924	Corn Rhizosphere	MPTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDTLSNFLDAFTRACPQLSQMR
Ga0207687_117729431	3300025927	Miscanthus Rhizosphere	METELMPTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSNFLTGFIRLKSPAR
Ga0207706_104978173	3300025933	Corn Rhizosphere	METELMPTERPFPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSNFLAGFIRLKSPAR
Ga0207689_109174572	3300025942	Miscanthus Rhizosphere	METELMLTERPYPGQLWKHDSIRVIVVGVSPNTVTYEDLSRRAGVTRDSLSNFLTGFTKLKSPAR
Ga0207668_107766152	3300025972	Switchgrass Rhizosphere	MPTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSTFLDAFTRLKSPAR
Ga0207677_106666391	3300026023	Miscanthus Rhizosphere	AHHKAADFANGVRPYPGQLWKHDSIRVIVVAVNPNTVTYEDLSRRAGVTRDTLSNFLDAFTRLKSPAR
Ga0207703_117634862	3300026035	Switchgrass Rhizosphere	MPTERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSNFLTGFIRLKSPAR
Ga0207678_101761024	3300026067	Corn Rhizosphere	MPTERPYPGQLWKHDSIRVIVVAVGPNTVTYEDLSGRAGVTRDSLSNFLTGFIRLKSPAR
Ga0207678_109874491	3300026067	Corn Rhizosphere	METELMLAERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSNFLDAFTRLKSPAR
Ga0207698_125101981	3300026142	Corn Rhizosphere	TELMPAERPYPGQLWKHDSIRVIVVAVSPNTVTYEDLSRRAGVTRDSLSNFLDAFTRLKSPAR
Ga0268265_108248982	3300028380	Switchgrass Rhizosphere	MSVMETELMLTERPYPGQLWKHDSIRVIVVGVSPNTVTYEDLSRRAGVTRDSLSNFLTGFIRLKSPAR
Ga0307415_1025846692	3300032126	Rhizosphere	MRTERPYPGQLWKHDSLRVIVAVSPNTVTYEDLSGRAGVTRDSLSNFL
Ga0268251_102462481	3300032159	Agave	PYPGQLWKHDSLRVIVVAVSPNTVTYEDLSGRAGVTRASLSNFLAGFTRLTRPAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F093668

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences