NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F093655

Metagenome Family F093655

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F093655
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 131 residues
Representative Sequence MKDEPSLKEIGERLERLDAPIRMWREARDRAFAAAFGPKQGKLSNLMARLPQAANAAAALGLGPRDEAFAAFDEICDLYARSDPARCAIIRGVVHEHEARGLLEDYIGYASRILKQGGRPEWLERGIA
Number of Associated Samples 86
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(26.415 % of family members)
Environment Ontology (ENVO) Unclassified
(50.943 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(66.038 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.
1AL16A1W_100044504
2Ga0062594_1004084292
3Ga0066680_106551652
4Ga0066690_104345961
5Ga0066688_104766711
6Ga0066678_107431971
7Ga0066671_101911831
8Ga0066676_108244982
9Ga0070673_1023996041
10Ga0066687_100045461
11Ga0070706_1008944171
12Ga0070699_1004286322
13Ga0066707_108386771
14Ga0066704_100758491
15Ga0066704_103874631
16Ga0066704_104806711
17Ga0066693_103612551
18Ga0066703_103725571
19Ga0066702_108266431
20Ga0068854_1007611322
21Ga0070717_112272841
22Ga0066656_102837972
23Ga0066652_1015719362
24Ga0066653_100373941
25Ga0075433_109036171
26Ga0075425_1008805391
27Ga0075425_1027518032
28Ga0066710_1000390048
29Ga0066710_1010317002
30Ga0066710_1011030051
31Ga0066710_1022679681
32Ga0066709_1020160261
33Ga0066709_1020349072
34Ga0105241_124054942
35Ga0134070_102239942
36Ga0134111_101243091
37Ga0134111_101793381
38Ga0134080_101062861
39Ga0134071_104869231
40Ga0134124_129760582
41Ga0134123_127383312
42Ga0120159_10387553
43Ga0137389_109517202
44Ga0137399_110864891
45Ga0137374_111163671
46Ga0137380_104494901
47Ga0137376_107981561
48Ga0137376_113699092
49Ga0137378_107379861
50Ga0137378_117299471
51Ga0137384_106518261
52Ga0137358_109767722
53Ga0137397_107357572
54Ga0137396_100988843
55Ga0137396_112605721
56Ga0137416_116441912
57Ga0134087_101213092
58Ga0157378_104584012
59Ga0134081_103906182
60Ga0134075_100093913
61Ga0137418_104388062
62Ga0134089_100424172
63Ga0134089_105670781
64Ga0134085_101496581
65Ga0134074_12612952
66Ga0134074_12983982
67Ga0134083_100673021
68Ga0184605_104893811
69Ga0066655_101025921
70Ga0066667_110363011
71Ga0066669_102134441
72Ga0066669_109198311
73Ga0193723_10379742
74Ga0193747_10597631
75Ga0193747_11045902
76Ga0193757_10138672
77Ga0193719_103344761
78Ga0193714_10232742
79Ga0207646_108502542
80Ga0209238_12349022
81Ga0209468_11059851
82Ga0209471_11530621
83Ga0209471_13265892
84Ga0209131_10832163
85Ga0209687_10160531
86Ga0209266_10888032
87Ga0209266_11968312
88Ga0209802_10407091
89Ga0209158_12088702
90Ga0209159_11425811
91Ga0209160_13424512
92Ga0209156_104775152
93Ga0209590_100488381
94Ga0137415_106730042
95Ga0307309_100525852
96Ga0307319_101195582
97Ga0307282_101548752
98Ga0307290_102645971
99Ga0307290_103077751
100Ga0307290_103345102
101Ga0307299_100302623
102Ga0307310_100626502
103Ga0307310_101858461
104Ga0307314_101753641
105Ga0307277_102448691
106Ga0307471_1006206031
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 67.95%    β-sheet: 0.64%    Coil/Unstructured: 31.41%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110120MKDEPSLKEIGERLERLDAPIRMWREARDRAFAAAFGPKQGKLSNLMARLPQAANAAAALGLGPRDEAFAAFDEICDLYARSDPARCAIIRGVVHEHEARGLLEDYIGYASRILKQGGRPEWLERGIASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy


Visualization
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Soil
Vadose Zone Soil
Terrestrial Soil
Grasslands Soil
Soil
Permafrost
Soil
Grasslands Soil
Hardwood Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Populus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
16.0%16.0%13.2%26.4%11.3%3.8%2.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
AL16A1W_1000445043300000887PermafrostMTDEPSLEELGARLERLDAPIRIWREQRDRAFAAAFGPQKGRLSNLMARLPQTATAVAGLGLGPRDEVFAVFDEICDLYARSDAPRCAMIRGLVHEREARALLDDYLAYASRILKKGGRPEWLERGIA
Ga0062594_10040842923300005093SoilMNEEPSLEELGARLERLDAPIRIWREQRDRAFAAAFGPQKGRLSNLMARLPQAANAAAELGLGPRDQVFAVFDEVCDLYVRSDAPRCAIIRGVVHQREARVLLDDYLAYASRILKKGGRPEWLERAIA
Ga0066680_1065516523300005174SoilMKDEPSVRSLEERLERLDSPIRIWREARDRAFAAAFGPKEGKLSNLMARMPQASGAAASVGLGPRDEVFAAFDGICDLYARSDAARCALIRGIVHNREARVLLSDYIAYASRILKQGGRPEWLERGIVAASIDDQRVDY
Ga0066690_1043459613300005177SoilMKDDPSLALLQAKLERLDAPIRSWRQARERSFDAAFGPKQGRLSNLMARLPQAAGAAASIGLGPRDETFAALDEICDLYARSDLPRCAIMRGIVHEHEARTLLEDYI
Ga0066688_1047667113300005178SoilMKDEPSLKEIGERLERLDAPIRMWREARDRAFAAAFGPKQGKLSNLMARLPQAANAAAALGLGPRDEAFAAFDEICDLYARSDPARCAIIRGVVHEHEARGLLEDYIGYASRILKQGGRPEWLERGIAAASIDDQRRDYRDWLMALGDLYLSARAARLDPT
Ga0066678_1074319713300005181SoilVTDEEPSLRSFQDRLERLDTPIRKWREARERSFAAAFGPKQGRLSNLMARLPQAASAAAALGLGPRDEVFAIFDELFDLYARSDPPHCAIIRGIVHEREARVLLEDYIAYASGILKQGGRPEWLERGVVAASIDDQRRDYRDWLMSLGDLYLS
Ga0066671_1019118313300005184SoilMKDEPSLKEIGERLERLDAPIRMWREARDRAFAAAFGPKQGKLSNLMARLPQAANAAAALGLGPRDEAFAAFDEICDLYARSDPARCAIIRGVVHEHEARGLLEDYIGYASRILKQGGRPEWLERGIAAASIDDQRRDYRDWLMALGDLYLSARAARLDPTPV
Ga0066676_1082449823300005186SoilMTDEPSLGSLQEKLERLDAPIRIWRESRDRAFAAAFGPKQGKLSNLMARLPQGANAAGALGPGPRDEAFAVFDEICDLYARSDPPRCAIIRGIVHECEARVLLEDYVGYASRLLKQGGRPGW
Ga0070673_10239960413300005364Switchgrass RhizosphereGTTLAMNEEPSLEELGARLERLDAPIRIWREQRDRAFAAAFGPQKGRLSNLMARLPQAANAAAELGLGPRDQVFAVFDEICDLYARSDAPRCAIIRGVVHQREARVLLDDYLAYASRILKKGGRPEWLERAIAAASIDDQRRDYRDWIMSLGDVYLSARAAHLDPSP
Ga0066687_1000454613300005454SoilMKDEPSLKEIGERLERLDAPIRMWREARDRAFAAAFGPKQGKLSNLMARLPQAANAAAALGLGPRDEAFAAFDEICDLYARSDPARCAIIRGVVHEHEARGLLEDYIGYASRILKQG
Ga0070706_10089441713300005467Corn, Switchgrass And Miscanthus RhizosphereMTDEPSLEELGERLQRLDAPIRIWREQRDRAFAAAFGPQKGRLSNLMARLPQAASAAAALGLGPRDEVFAVFDAICDLYARSDPPRCASIRRIVHEREAHILLDEYLGYA
Ga0070699_10042863223300005518Corn, Switchgrass And Miscanthus RhizosphereMTDEPSLDELGERLERLDTPIRIWREQRDRAFDAAFGPKKGKLSNLMARLPQAAAGLGLGPRDEVFAVFDEICDLYARSDAPRCAIIRGIVHEREAHRLLEDYLAYSSRILKQGGRPEWLERG
Ga0066707_1083867713300005556SoilMKDEPSLKEIGERLERLDAPIRMWREARDRAFAAAFGPKQGKLSNLMARLPQAANAAAALGLGPRDEAFAAFDEICDLYARSDPARCAIIRGVVHEHEARGLLEDYIGYASRILKQGGRPEWLERGIAAASIDDQRRDYRDWLMAL
Ga0066704_1007584913300005557SoilMKDEPSLRSLEERLERLDSPIRIWREARDRAFAAAFGPKEGKLSNLMGRLPQASGAAASVGLGPRDEVFAAFDETCDLYARSDAARCALIRGIVHNREARVLLSDYIAYASRILKQGGRPEWLERGIVAASIDDQRVDYRDWLMS
Ga0066704_1038746313300005557SoilMKDEPSLKEIGERLERLDAPIRMWREARDRAFAAAFGPKQGKLSNLMARLPQAANAAAALGLGPRDEAFATFDEICDLYARSDPARCAIIRGVVHEHEARGLLEDYIGYASRILKQGGRPEWLERGIAAASIDDQR
Ga0066704_1048067113300005557SoilMIDGPSLEELRKRLERLDAPIRMWREQRDRAFDAAFGPKKGKLSNLMARLPQAANAAAGLGLGPRDEVFAVFDEICDLYARSDPPRCAIIRGIVHEREAHLLLDDYLAYASRILKQGGRPEWLERGVAAASIDDQRRDYRDWLM
Ga0066693_1036125513300005566SoilMKDEPSLKEIQERLERLDAPIRIWREQRDRAFDAAFGPKTGKLSNLMARLPPAANAASGLGLGPRDDVFAVFDEICDVYVRSDASRCAIIRGIVHEREAHRLLGDYLAYASRVLKQGGRPEWLERGIAAASID
Ga0066703_1037255713300005568SoilLTDEEPSLRSFQDRLERLDTPIRKWREARERSFAAAFGPKQGRLSNLMARLPQAASAAAALGLGPRDEVFAIFDELFDLYARSDPPHCAIIRGIVHEREARVLLEDYVAYASGILKQGGRPEWLERGVVAASIDDQRRDYRDWLMSLGDLYLS
Ga0066702_1082664313300005575SoilMKDEPSLKEIGERLERLDAPIRMWREARDRAFAAAFGPKQGKLSNLMARLPQAANAAAALGLGPRDEAFATFDEICDLYARSDPARCAIIRGVVHEHEARGLLEDYIGYASRILKQGGRPEWLERGIAAASIDDQRRDYRDWLMALGDLYLSARAARLDPT
Ga0068854_10076113223300005578Corn RhizosphereMNEEPSLEELGARLERLDAPIRIWREQRDRAFAAAFGPQKGRLSNLMARLPQAANAAAELGLGPRDQVFAVFDEVCDLYVRSDAPRCAIIRGVVHEREARVLLDDYLAYASRILKKGGRPEWLERAIAAASIDDQRRDYRDWIMS
Ga0070717_1122728413300006028Corn, Switchgrass And Miscanthus RhizosphereMKDDPSLASLQARLERLDAPIRMWRQARERSFDAAFGPNHGKLSNLMARLPRAAGAAASIGLGPRDEVFAAFDEICDLYARSDPARCAIMRGVVHEHEARALLEDYIGYASGILKQGGRPEWLERGIAAASIDDQRR
Ga0066656_1028379723300006034SoilMIDEPSLEELRERLERLDAPIRMWREQRDRAFDAAFGPKKGKLSNLMARLPQAANAAAGLGLGPRDEVFAVFDEICDLYARSDPPRCAIIRGIVHEREAHLLLDDYLAYASRILK
Ga0066652_10157193623300006046SoilMTDEPSLEELRERLERLDAPIRMWREQRDRAFDAAFGPKKGKLSNLMARLPQAANAAAGLGLGPRDEVFAVLDEICDLYARSDPPRCAIIRGIVHERKAQLLLDDYLAYASRILKQGGRPEWLERGVAAASIDDQRRDYRDWLMALGDLYLSARAAHLDPSPVL
Ga0066653_1003739413300006791SoilMKDEPSLKEIGERLERLDAPIRMWREARDRAFAAAFGPKQGKLSNLMARLPQAANAAAALGLGPRDEAFAAFDEICDLYARSDPARCAIIRGVVHEHEARG
Ga0075433_1090361713300006852Populus RhizosphereMNEEPSLSSLKGRLERLDPPIRIWREARERAFQATFGPQRGQLSTLMGRLPQGAAAAAALGLGPRDEVFAVLDEICDSYARSDLPRCAIIRGIVQEREARTLLEEYVTHAATVLRQGGRPEWLER
Ga0075425_10088053913300006854Populus RhizosphereMNEEPSLSSLKGRLERLDPPIRIWREARERAFQATFGPQRGQLSTLMGRLPQGAAAAAALGLGPRDEVFAVLDEICDSYARSDLPRCAIIRGIVQEREARTLLEEYVTHAATVLRQGGRPEWLERGIAAASIDDQ
Ga0075425_10275180323300006854Populus RhizosphereMTDEPSLQELGERLQRLDAPIRIWREQRDRAFAAAFGPQKGRLSNLMARLPQAASAAAALGLGPRDEVFAVFDAICDLYARSDPARCAIIRGIVHEREAHILLDEYLGYA
Ga0066710_10003900483300009012Grasslands SoilMKDEPSLGSLEERFERLDSPIRIWREARDRAFAAAFGPKEGKRSNLMGRLPQATGVAASVGLGPRDEVFAAFDQTCDLYARSDPAHCALIRGIVHNREARVLLSDYIAYASRILKQGGRPEWLERGVAAASIDDQRVDY
Ga0066710_10103170023300009012Grasslands SoilLTDEEPSLRSFQDRLERLDTPIRKWREARERSFAAAFGPKQGRLSNLMARLPQAASAAAALGLGPRDEVFAIFDELFDLYARSDPPHCAIIRGIVHEREAHVLLEDYVAYASGILKQGGRSEWLERGVVAASIDDQRRDYRDWLMSLGDLYLSAH
Ga0066710_10110300513300009012Grasslands SoilMTDEPSLGSLQTKLERLDTPIRIWRESRDRAFAAAFGPKKGQLSNLMARLPQAANAAAALGLGPRDEVFDVFDEICDLYARSDPAGWAIIRGIVHAREARALLEEYVA
Ga0066710_10226796813300009012Grasslands SoilMTEGPSLEELGERLARLDAPIRIWREQRDRSFDAAFGPKKGKLSNLMARLPQAANAAAALGTGPRDEVFAVFDEICDVYTRSDPPRCALIRGIVHGREAHRLLEDYLAYASRTLKQGGRPEWLERGVAAASIDDQGRDYRDWLMSLGD
Ga0066709_10201602613300009137Grasslands SoilMKDEPSLRSLEERLERLDSPIRIWREARDRAFAAAFGPKEGKLSTLMGRLPQASGAAASVGLGPRDEVFAAFDDICDLYARSDAARCALIRGIVHNREARALLGDYIAYASRI
Ga0066709_10203490723300009137Grasslands SoilMKDEPSLKEIGERLERLDTPIRMWREARDRAFAAAFGPKQGKLSNLMARLPQAANAAAALGLGPRDEAFAAFDEICDLYARSDPARCAIIRGVVHEHEARGLLE
Ga0105241_1240549423300009174Corn RhizosphereMNEEPSLEELGARLERLDAPIRIWREQRDRAFAAAFGPQKGRLSNLMARLPQAANAAAELGLGPRDQVFAVFDEVCDLYVRLDAPRCAIIRGVVHEREARVLLDDYLAYASRILKKGGRPEWLERAIAAAS
Ga0134070_1022399423300010301Grasslands SoilMKDEPSFEALAARLERFDMPIRVWQQARERAFSAAFGPKQGKLSNLMGRLPQAGGAAASVGVGPRDEVFALFDEICDLYTRSDPARCAIIRGVVHSREARVLLEGYVAYASRLLQQ
Ga0134111_1012430913300010329Grasslands SoilMIDEPSLEELRERLERLDAPIRMWREQRDRAFDAAFGPKKGKLSNLMARSPQAANAAAGLGLGPRDEVFAVLDEICDLYARSDPPRCAIIRGIVHERKAHLLLDDYLAYASRILKQGGRPEWLE
Ga0134111_1017933813300010329Grasslands SoilMKDEPSLRSLEERLERLDSPIRIWREARDRAFAAAFGPKEGKLSNLMGRLPQASGAAASVGLGPRDEVFAAFDETCDLYARSDAARCALIRGIVHNREARVLLSDYIAYASRILKQGGRPEWLERGIVAASIDDQRVDYRDWLMSLGDLYLSARAAHLDPT
Ga0134080_1010628613300010333Grasslands SoilMKDEPSLKEIGERLERLDAPIRMWREARDRAFAAAFGPKQGKLSNLMARLPQAANAAAALGLGPRDEAFAAFGEICDLYARSDPARCAIIRGVVHEHEARG
Ga0134071_1048692313300010336Grasslands SoilMIDEPSLEELRERLERLDAPIRMWREQRDRAFDAAFGPKKGKLSNLMARLPQAANAAAGLGLGPRDEVFAVFDEICDLYARSDPPRCVIIRGIVHEREAHLLLDDYLAYASRILKQGGRPEWLERGVAAASIDDQRRDYRDWLM
Ga0134124_1297605823300010397Terrestrial SoilMNEEPSLEELGARLERLDAPIRIWREQRDRAFAAAFGPQKGRLSNLMARLPQAANAAAELGLGPRDQVFAVFDEVCDLYVRSDAPRCAIIRGVVHQREARVLLDDYLAYASRILKKGGRPEWL
Ga0134123_1273833123300010403Terrestrial SoilMNEEPSLEELGARLERLDAPIRIWREQRDRAFAAAFGPQKGRLSNLMARLPQAANAAAELGLGPRDQVFAVFDEVCDLYVRSDAPRCAIIRGVVHQREARVLRDDYLAYASRILKKGGR
Ga0120159_103875533300012014PermafrostMTDEPSLEELGARLERLDAPIRIWREQRDRAFAAAFGPQKGRLSNLMARLPQTATAVAGLGLGPRDEVFAVFDEICDLYARSDAPRCAMIRGLVHEREARALLDDYLAYASRILK
Ga0137389_1095172023300012096Vadose Zone SoilMKDDPSLLSLHERLERLDAPIRIWREARDRAYAAAFGPKQGRLSNLMARLPQAANAAAALGLGPRDEAFAVFDETCDLYARSDPARCAIVRAIVYEHEVRA
Ga0137399_1108648913300012203Vadose Zone SoilMTNEPSLGSLQEKLERLDTPIRIWRESRDRAFAAAFGPKKGKLSNLMARMPQAANAAAALGLGPRDEVFAAFDEVCDLYARSDPPKCAIIRGIVHEREARALLEEYV
Ga0137374_1111636713300012204Vadose Zone SoilMDEPTLGSLQEKLERLDAPIRIWRESRDRAFAAAFGPKQGKLSNLMARLPQGANAAGALGPGPRDEAFAVFDEICDLYARSDPPRCAIIRGIVHEREARVLLEEYVGYASRLLKQGGRPEWLERGVAAASIDDQRRDYRDWLMSLGD
Ga0137380_1044949013300012206Vadose Zone SoilMTDGSSLDELGERLERLDAPIRIWREQRDRAFDAAFGPKKGKLSNLMARLPQAANAAAGLGLGPRDEVFAVFDEICDLYARSDTPRCAIIRGIVHEREAHRLLEDYLAYASRILKQGGRPEWLERGVAAASIDDQRRDYRDWLMSLGDLYLSARAAHLD
Ga0137376_1079815613300012208Vadose Zone SoilMTDEPSLTELGERLERLDAPIRIWREQRDRAFDAAFGPKTGKLSNLMARLPQAANAASGLGLGPRDDVFAAFDEICDVYARSDASRCAIIRGIVHEREAHRLLGDYLAYAARVLKKGGRPEWL
Ga0137376_1136990923300012208Vadose Zone SoilMKDEPSLKEIQERLERLDAPIRIWREQRDRAFDAAFGPKTGKLSNLMARLPQAANAASELGLGPRDEVFAVFDEICDVYVRSDPSRCAMIRGVVHEREAHRLLGDYLGYAARVLKQGGRPEWLERGIAAASIDDQRRDY
Ga0137378_1073798613300012210Vadose Zone SoilMTDEPSLTELGERLQRLDAPIRIWREQRDRAFAAAFGPQKGRLSNLMARLPQAASAAAALGLGPRDEVFAVFDAICDLYARSDPPRCAIIRGIVHECEAHILLDEYLGYASRILKQGG
Ga0137378_1172994713300012210Vadose Zone SoilMKDEPSLRSLEERLERLDSPIRIWREARDRAFAAAFGPKEGKLSNLMGRLPQASGAAASVGLGPRDEVFSAFDEICDLYARSDAPHCAFIRGIVQNREARALLDDYIAYASRVLKQGGRPEWLERGIVAASIDDQRVDYRDWLMS
Ga0137384_1065182613300012357Vadose Zone SoilMTDEPSLEELRERLERLDAPIRMWREQRDRAFDAAFGPKKGKLSNLMARLPQAANAAAGLGLGPRDEVFAVFDEICDLYARSDPPRCAIIRGIVYERKAHLLLDDYLAYASRILKQGGRPEWLERGVAVASIDDQRRDYRD
Ga0137358_1097677223300012582Vadose Zone SoilMTDEPSLTELGERLERLDQPIRMWREQRDRAFAAAFGPQKGKLSNLMGRLPQAANAAAALGLGPSDEVFAVFDVICDTYARSDASRCAMIRGIVHEREAHILLDDYLAYASGVLKQGGRPEWLERGVAAASIDDQRRDYRDWLMSLG
Ga0137397_1073575723300012685Vadose Zone SoilMTDEPSLGSLQAKLERLDTPIRMWRESRDRAFAAAFGPKKGQLSNLMARLPQAANAAAALGLGPRDEVFAVFDEICDLYARSDPAECAIIRGIVHAREARGLLEEYVAHASQVLKQGGRP
Ga0137396_1009888433300012918Vadose Zone SoilMTDEPSLKELGERLERLDTPIRMWREQRDRAFAAAFGPQKGKLSNLMGRLPQAANAAAALGLGPRDEVFAVFDEICDTYARSDAPRCAMIRGIVHEREAHILLDDYLAYVSGVLKQGGRPEWLERGV
Ga0137396_1126057213300012918Vadose Zone SoilMTEEPSLGSLQEKLERLDTPIRIWRESRDRAFAAAFGPKKGKLSNLMARMPQAANAAAALGLGPRDEVFAAFDEVCDLYARSDPPKCAIIRGIVHEREARALLEEYVGYASHILKQGGRPEWLERAVAAASIDDQRRDYRDWLMSLGDL
Ga0137416_1164419123300012927Vadose Zone SoilMKDEPSLKQIQERLERLDAPIRIWREARDRAFSAAFGPKEGKLSGLMGRLPQAANAAAALGLGPRDETFAALDEICDLYARSDPPRCAIIRGVVHEHEARRLLEDYIANASRILKQGGRPEWLERGVAAASID
Ga0134087_1012130923300012977Grasslands SoilMKDEPSLKEIGERLERLDAPIRMWREARDRAFAAAFGPKQGKLSNLMARLPQAANAAAALGLGPRDEAFAAFDEICDLYARSDPARCAIIRGVVHEHEARGLLEDYIGYASRILKQGGRPEWLERGIAAASI
Ga0157378_1045840123300013297Miscanthus RhizosphereMNEEPSLEELGARLERLDAPIRIWREQRDRAFAAAFGPQKGRLSNLMARLPQAANAAAELGLGPRDQVFAVFDEVCDLYVRSDAPRCAIIRGVVHQREARVLLDDYLAYASRILKKGGRPEWRERAIAAAAIDEHRRDYRDWIMSIGDI
Ga0134081_1039061823300014150Grasslands SoilMKDEPSLKEIGERLERLDAPIRMWREARDRAFAAAFGPKQGKLSNLMARLPQAANAAAALGLGPRDEAFAAFDEICDLYARSDPARCAIIRGVVHEHEARGLLEDYIGYASRILKQGGRPEWLERGIA
Ga0134075_1000939133300014154Grasslands SoilMTDAPSFKTLGEKLERLDAPIRMWRESRDRAFAAAFGPKQGKLSNLMARLPQAANAAGALGPGPRDEAFAVFDEICDLYARSDAPRCAIIRGVVHEREARVLLEEYVGYASRLLKQGGRPEWLERGIAAISIDDQRRDYRD*
Ga0137418_1043880623300015241Vadose Zone SoilMKDEPSLKQIQERLERLDAPIRIWREARDRAFSAAFGPKEGKLSGLMGRLPQAANAAAALGLGPRDETFAALDEICDLYARSDPPRCAIIRGIVHEHEARGLLEDYIANASRILKQGGRPEWLERGVAAVSIDDQRRDYRDWLMALGDLYLSGLAAHRHRVHLRKCFC*
Ga0134089_1004241723300015358Grasslands SoilMTDEPSLGSLQEKLERLDAPIRIWRESRDRAFAAAFGPKQGKLSNLMARLPQGANAAGALGPGPRDEAFAVFDEICDLYARSDPPRCAIIRGIVHEREARVLLEEYVATRRAS*
Ga0134089_1056707813300015358Grasslands SoilMTDAPSFKTLGEKLERLDAPIRMWRESRDRAFAAAFGPKQGKLSNLMARLPQAANAAGALGPGPRDEAFAVFDEICDLYARSDAPRCAIIRGVVHEREARVLLEEYVGYASRLLKQGGRPEWLERGIAAISIDDQRRDYRDWLMSLG
Ga0134085_1014965813300015359Grasslands SoilMKDEPSFEALAARLERFDMPIRVWQQARERAFSAAFGPKQGKLSNLMGRLPQAGGAAASVGVGPRDEVFALFDEICDLYTRSDPARCAIIRGVVHSREARVLLEGYVAYASRLLQQGGRPEWLERGVAAASIDDQGDDYR
Ga0134074_126129523300017657Grasslands SoilMKDEPSLRSLEERLERLDSPIRIWREARDRAFAAAFGPKEGKLSNLMGRLPQASGAAASVGLGPRDEVFSAFDEICDVYARSDAPHCALIRGIVQNREARALLDDYIAYASRILKQGG
Ga0134074_129839823300017657Grasslands SoilMTDEPSLKELGERLERLDAPIRMWREQRDRAFAAAFGPQKGKLSNLMARLPQAANAAAALGLGPRDEVFATFDEICDLYARSDPPRCAIVRGIVHEHEAHLLLDEYLAYASRILKKGGRPEWLERGIVAASIDDQRRDYRDWLMSLG
Ga0134083_1006730213300017659Grasslands SoilMTDEPSLGSLQEKLERLDAPIRIWRESRDRAFAAAFGPKQGKLSNLMARLPQGANAAGALGSGPRDEAFAVFDEMCDLYARSDPPRCAIIRGIVHEREARVLLEEYVGHASRLLKQGGRP
Ga0184605_1048938113300018027Groundwater SedimentMTDEPSLEALAERLQRLDAPIRMWRESRDRAYAAAFGPQKGKLSNLMARLPQAANAAAGLGLGPRDEVFAVFDEICDLYLRSDPSRCAIIRGIVHEREAHFLLDDYLGYASRILKQGGRPEWLERGVAAASIDDQRRDYRDWLMSLGDLYLS
Ga0066655_1010259213300018431Grasslands SoilMKDEPSLRSLEERLERLDSPIRIWREARDRAFAAAFGPKDGKLSNLMGRLPQASGAAASVGLGPRDEVFAAFDETCDLYARSDAARCALIRGIVHNREARVLLSDYIAYASRILKQGGRPEWLER
Ga0066667_1103630113300018433Grasslands SoilMKDEPSLRSLEERFERLDSPIRIWREARDRAFAAAFGPKEGKRSNLMGRLPQATGVAASVGLGPRDEVFAAFDQTCDLYARSDAAHCALIRGIVHNREARVLLSDYIAYASRLLKPGGRP
Ga0066669_1021344413300018482Grasslands SoilMKDEPSLRSLEERLERLDSPIRIWREARDRAFAAAFGPKEGKLSNLMGRLPQASGAAASVGLGPRDEVFAAFDEICDLYARSDTAHCALIRGIVHNRESRVLLAD
Ga0066669_1091983113300018482Grasslands SoilMKDEPSLKEIGERLERLDAPIRMWREARDRAFAAAFGPKQGKLSNLMARLPQAANAAAALGLGPRDEAFAAFDEICDLYARSDPARCAIIRGVVHEHEARGLLEDYIGYA
Ga0193723_103797423300019879SoilMTDEPSLEELAGQLKKLDTPIRIWREARDRAFSATFDPKGGRLSTLMGRLPQAAGAAAAIGSGPRDEVFAIFDEICDLYGRSDPQRCSVIRRIVHEREARLLIEAYLAHASQVL
Ga0193747_105976313300019885SoilVTDEPSLEDLSERLARLDAPIRIWREQRDRAFDAAFGPKKGQLSNLMARLPQASNAAAAIGAGPRDEVFAVFDEICDLYTRSDPARCAIIRGIVHAREAHRLLEEYIGYASRILKQGGRPEWLERGVAA
Ga0193747_110459023300019885SoilMMDELSVEELGKRLERLDAPIRMWREQRDRSFDAAFGPKKGKLSNLMARMPQAANAAAALGLGPRDEVFAVFDEICDFYIHSDPSRCALIRGIVHEREAHFLLGEYLAYASGIL
Ga0193757_101386723300020008SoilMTDEPSLTEIGERLERLDAPIRIWREQRDRAFDAAFGPKTGKLSNLMGRLPQAANAASGLGLGPRDEVFAVFDEICDVYARSDPSRCALIRGIVHEREAHRLLGDY
Ga0193719_1033447613300021344SoilMTDEPSLEDLGKRLERLDAPIRMWREQRDRAFEAAFGPQKGRLSNLMARLPQAATAAAGLGLGPRDEVFAVFDELCDLYARSDPPRCAIIRGIVHEHEAHRLLDDYLAYASGILKQGGRPEWLERGIASASIDDQRRDYRDWLMSLGDLYLSARAAHLDPSPVL
Ga0193714_102327423300023058SoilMTDEPSLEELGSRLERLDAPIRIWREQRDRAFETAFGPQKGRLSNLMARLPQAANAAAALGLGPRDEVFAVFDAICDLYARSDAPRCAIIRGVVHEREARALLDDYLAYASGILK
Ga0207646_1085025423300025922Corn, Switchgrass And Miscanthus RhizosphereMKDDPSLLSLQERLERLDTPIRIWREARDRAYAAAFGPKQGRLSNLMARLPQAANAAAALGLGPRDEAFGVFDEACDLYARSDPARCAIVRGIVYEHEVRALLADYMAYASRILKQGGRPEWLE
Ga0209238_123490223300026301Grasslands SoilMKDDPSLALLQAKLERLDAPIRSWRQARERSFDAAFGPKQGRLSNLMARLPQAAGAAASIGLGPRDETFAAFDEICDLYARSDPPRCAIMRGIVHEHEARTLLEDYIGYASGILKRGGRSEWLE
Ga0209468_110598513300026306SoilMKDEPSLRSLEERLERLDSPIRIWREARDRAFAAAFGPKEGKLSNLMGRLPQASGAAASVGLGPRDEVFSAFDEICDVYARSDAPHCALIRGIVQNREARALLDDYIAYASRILKQGGRPEWLERGIVAASIDDQRVDYRDWLMSLGDLYLSARAARLD
Ga0209471_115306213300026318SoilMKDEPSLKEIGERLERLDTPIRIWREARDRAFAAAFGPKEGKLSSLMGRLPQAGNAAAALGLGPRDETFAALDEICDLYARSDPPRCAIIRGVVHDHEARRLLEDYIANASRILKEGGRPEWLERGVAAASIDDQRRDYRDWLMALGGLYLSGL
Ga0209471_132658923300026318SoilVTAEEPSLRSFQDRLERLDTPIRKWREARERSFAAAFGPKQGRLSNLMARLPQAASAAAALGLGPRDEVFAIFDELFDLYARSDPPHCAIIRGIVHEREARALLEDYVAYASGILKQGGRPEWL
Ga0209131_108321633300026320Grasslands SoilMTDEPSLKELGERLERLDAPIRMWREQRDRAFAAAFGPQKGRLSNLMARLPQAATAAAGLGLGPRDEVFAVFDELCGLYARSDPPRCAIIRGIVHDREAHRLLDDYLAYASGI
Ga0209687_101605313300026322SoilMKDEPSLKEIGERLERLDAPIRMWREARDRAFAAAFGPKQGKLSNLMARLPQAANAAAALGLGPRDEAFAAFDEICDLYARSDPARCAIIRGVVHEHEARGLLE
Ga0209266_108880323300026327SoilMKDEPSLRSLEERLERLDSPIRIWREARDRAFAAAFGPKEGKLSNLMGRLPQASGAAASVGLGPRDEVFSAFDEICDVYARSDAPHCALIRGIVQNREARALLDDYIAYASRILKQGGRPEWLERGIVAASIDDQRVDYRD
Ga0209266_119683123300026327SoilMIDEPSLEELRERLERLDAPIRMWREQRDRAFDAAFGPKKGKLSNLMARLPQAANAAAGLGLGPRDEVFAVFDEICDLYARSDPPRCAIIRGIVHEREAHLLLDDYLAYASRILKQGGRPEWLERGIVAASIDDQRRDYRDWLMALGD
Ga0209802_104070913300026328SoilMPIRMWREARERSFAAAFGPKQGKLSNLMARLPQAASAAAALGLGRRDEVFAIFDELCDLYARSDAPHCAIIRGIVHEREAHVLLEDYVAYASGILKQGGRPEWLERGVAAASIDDQRRDYRDWLMSLGDLYLSAHAAHVDPSP
Ga0209158_120887023300026333SoilMIDGPSLEELRERLEQLDAPIRMWREQRDRAFDAAFGPKKGKLSNLMARLPQAANAAAGLGLGPRDEVFAVFDEICDLYARSDPPRCVIIRDIVHEREAHLLLDDYLAYVSRILKQGGRPEW
Ga0209159_114258113300026343SoilMIDEPSLEELRERLERLDAPIRMWREQRDRAFDAAFGPKKGKLSNLMARLPQAANAAAGLGLGPRDEVFAVFDEICDLYARSDPPRCAIIRGVVHEREAHLLLDDYLAYASRILKQGGRPEWLERGIVAASIDDQRRDYRDWLMALGD
Ga0209160_134245123300026532SoilMKDEPSVRSLEERLERLDSPIRIWREARDRAFAAAFGPKEGKLSNLMARMPQASGAAASVGLGPRDEVFAAFDGICDLYARSDAARCALIRGIVHNREARVLLSD
Ga0209156_1047751523300026547SoilMKDEPSLKEIGERLERLDTPIRMWREARDRAFAAAFGPKQGKLSNLMARLPQAANAAAALGLGPRDEAFAAFGEICDLYARSDPARCAIIRGVVHEHEARGLLED
Ga0209590_1004883813300027882Vadose Zone SoilVTDEPSLSSLQERLARLDAPIRIWRESRDRAFDAAFGPKRGRLSNLMARLPQAAGAAASVGLGPRDAVFAALDDLCDLYARSDPPRCAIIRGIVHEREARILLEE
Ga0137415_1067300423300028536Vadose Zone SoilMNDEPSLTTLGERLERLDAPIRSWRESRDRSFDAAFGPKKGKLSNLMARLPQAANAAAALGLGPRDEVFAVFDEVCDRYARSDPSHCAIIRGLVHEREARLLLDDYIANATRVLKQGGRQEWLERGVAAASIEDQRRDYRDWLMSLGD
Ga0307309_1005258523300028714SoilMTDEPSLEELGSRLERLDAPIRIWREQRDRAFETAFGPQKGRLSNLMARLPQAANAAAALGLGPRDEVFAVFDAICDLYARSDASRCAIIRGVVHEREARALLDDYL
Ga0307319_1011955823300028722SoilMTDEPSLTELRERLERLDAPIRIWREQRDRAFAAAFGPQKGRLSNLMARLPQAANASAALGLGPRDEAFAVFDEICDLYVRSDAPRCAIIRGIVHEREAHVLID
Ga0307282_1015487523300028784SoilMTDEPSLKEIGERLERLDAPIRIWREQRDRAFAAAFGPQKGKLSNLMARLPQAANAAALGLGPRDEVFAVFDEICDLYARSDAPRCAIIRGIVHGREAHLLLDEYLGYASRILKQGGRPEWLERGIVAASIDDQRRDYRDWLMSLGDLYLSAWAAHLDPSPV
Ga0307290_1026459713300028791SoilMTDEPSLDELGERLAGLDAPIRIWREQRDRAFDAAFGPKKGKLSNLMARMPQAANSAAALGVGPRDEVFAVFDQICDLYARSDAALCARIRGIVHEREAHRLIDEYLGYVSRIL
Ga0307290_1030777513300028791SoilMTDEPSLKEIGERLERLDAPIRIWREQRDRAFAAAFGPQKGKLSNLMARLPQAANAAALGLGPRDEVFAVFDEICDLYARSDAPRCAIIRGIVHGREAHLLLDEYLGYASRILKQGGRPEWLERGIVAASIDDQRRDYRDWLMSLGDLYLSAW
Ga0307290_1033451023300028791SoilMTDEPSLTELGGRLERLDGPIRIWREQRDRAFDAAFGPKTGKLSNLMARLPQAANAASGLGLGPRDEVFAVFDEICDVYVRSDPSRCAIIRGIVHEREAHRLLGDYLAYAARVLKQGGRPEWLERGIAAASIDDQRRDYRDWLMSLGDLYLSAR
Ga0307299_1003026233300028793SoilMTDEPSLDELGERLAGLDAPIRIWREQRDRAFDAAFGPKKGKLSNLMARMPQAANSAAALGVGPRDEVFAVFDQICDLYARSDPLLCARIRGIVHEREAHRLLDEYLGYVARILKQGGRP
Ga0307310_1006265023300028824SoilMTDEPSLDELGERLAGLDAPIRIWREQRDRAFDAAFGPKKGKLSNLMARMPQAANSAAALGVGPRDEVFAVFDQICDLYARSDAALCARIRGIVHEREAHRLLDEYLGYVARILKQGGRPEWLERGIAAASIDDQGRDYRDWLMSL
Ga0307310_1018584613300028824SoilMTDEPSLEELGSRLERLDAPIRIWREQRDRAFETAFGPQKGRLSNLMARLPQAANAAAALGLGPRDEVFAVFDAICDLYARSDASRCAIIRGVVHEREARALLDDYLAYASGILKKGGRPEWLERA
Ga0307314_1017536413300028872SoilMTDEPSLEELGSRLERLDSPIRIWREQRDRAFETAFGPQKGRLSNLMARLPQAANAAAALGLGPRDEVFAVFDAICDLYARSDAPRCAIIRGVVHEREARALLDDYLAYASGILKKGGRPEWLERAIAAASIDDQRRDYR
Ga0307277_1024486913300028881SoilMTDEPSLKELGERLKKLDTPIRIWREARDRAFSATFDPKGGRLSTLMGRLPQAAGAAASVGAGPRDEVFAIFDEICDLYARADPARCAIIRRIVHEREARRLLEAYLAHASQVLKQGGRSDWLERGIAAASIDDQGNDYRDWLVSLGGLYLNAYRVHLDPSPV
Ga0307471_10062060313300032180Hardwood Forest SoilMTDGPSLEELRERLERLDTPIRIWREQRDRAFDAAFGPKKGKLSNLMARLPQAANAAAGLGLGPRDEVFAVFDEICDLYARSDAPRCAIIRGVVQEREAHRILEDYLAYASRILKQGGRPEWLERGVAAASIDDQRRDYRDWL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.