Metagenome / Metatranscriptome Family F093648

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093648
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	46 residues
Representative Sequence	MKRSVVFVVFFLILGFALAGLYWSQRRPKSTPVSANAILNMAADAQRDL
Number of Associated Samples	91
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.21 %
% of genes near scaffold ends (potentially truncated)	99.06 %
% of genes from short scaffolds (< 2000 bps)	88.68 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.113 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (26.415 % of family members)
Environment Ontology (ENVO)	Unclassified (32.075 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.208 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 49.35% β-sheet: 0.00% Coil/Unstructured: 50.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF10101	DUF2339	88.68
PF13481	AAA_25	0.94
PF13662	Toprim_4	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.11 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.11 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.11 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	28.30 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	17.92 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.43 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.92 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.43 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.92 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.43 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.92 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	8.49 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.92 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.66 %
Unclassified	root	N/A	1.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10089623	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	765	Open in IMG/M
3300001137\|JGI12637J13337_1006701	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	965	Open in IMG/M
3300002886\|JGI25612J43240_1055311	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	595	Open in IMG/M
3300002914\|JGI25617J43924_10364709	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	502	Open in IMG/M
3300002916\|JGI25389J43894_1068402	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	610	Open in IMG/M
3300004091\|Ga0062387_100121730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1449	Open in IMG/M
3300004092\|Ga0062389_100698109	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1188	Open in IMG/M
3300005171\|Ga0066677_10094220	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1576	Open in IMG/M
3300005176\|Ga0066679_10789843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300005526\|Ga0073909_10079866	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300005921\|Ga0070766_10321722	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300005921\|Ga0070766_10400525	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300006034\|Ga0066656_11027671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300006791\|Ga0066653_10337913	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300006794\|Ga0066658_10003510	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5553	Open in IMG/M
3300006800\|Ga0066660_10288568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1304	Open in IMG/M
3300006804\|Ga0079221_10604717	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300006954\|Ga0079219_11524412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300007265\|Ga0099794_10027691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2629	Open in IMG/M
3300007788\|Ga0099795_10028111	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300009088\|Ga0099830_10325132	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300009088\|Ga0099830_10675593	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300009089\|Ga0099828_10304694	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300010048\|Ga0126373_12925550	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300010360\|Ga0126372_11136031	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300010401\|Ga0134121_10035662	All Organisms → cellular organisms → Bacteria	4043	Open in IMG/M
3300011120\|Ga0150983_15831094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300011269\|Ga0137392_10423966	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300011270\|Ga0137391_10452539	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300011270\|Ga0137391_10457405	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300011271\|Ga0137393_10402636	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300012096\|Ga0137389_10622660	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300012189\|Ga0137388_10802226	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300012189\|Ga0137388_11385886	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300012200\|Ga0137382_10475641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300012202\|Ga0137363_10148302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1840	Open in IMG/M
3300012202\|Ga0137363_10528795	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300012203\|Ga0137399_10273996	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300012207\|Ga0137381_10787146	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300012349\|Ga0137387_10699735	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300012351\|Ga0137386_11124737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300012582\|Ga0137358_10197114	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300012925\|Ga0137419_11626007	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300012929\|Ga0137404_11360624	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300014157\|Ga0134078_10066799	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300015054\|Ga0137420_1332569	All Organisms → cellular organisms → Bacteria	4834	Open in IMG/M
3300015241\|Ga0137418_10673299	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300015241\|Ga0137418_10829949	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300015358\|Ga0134089_10421817	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300016357\|Ga0182032_11434646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300017973\|Ga0187780_11414819	Not Available	513	Open in IMG/M
3300018085\|Ga0187772_10168040	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300018431\|Ga0066655_11022255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300018431\|Ga0066655_11345156	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300018431\|Ga0066655_11378171	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300020579\|Ga0210407_10785226	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300020579\|Ga0210407_11299863	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300021168\|Ga0210406_10383861	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300021180\|Ga0210396_10281356	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300021181\|Ga0210388_10103974	All Organisms → cellular organisms → Bacteria	2434	Open in IMG/M
3300021405\|Ga0210387_10648921	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300021420\|Ga0210394_10237630	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300021477\|Ga0210398_10928345	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300021478\|Ga0210402_10228977	All Organisms → cellular organisms → Bacteria	1713	Open in IMG/M
3300021478\|Ga0210402_10254999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1620	Open in IMG/M
3300021478\|Ga0210402_11106155	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300021479\|Ga0210410_10050042	All Organisms → cellular organisms → Bacteria	3639	Open in IMG/M
3300021559\|Ga0210409_10657055	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300021559\|Ga0210409_10863194	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300021560\|Ga0126371_13770277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300024182\|Ga0247669_1000896	All Organisms → cellular organisms → Bacteria	10247	Open in IMG/M
3300024219\|Ga0247665_1009426	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300024251\|Ga0247679_1001773	All Organisms → cellular organisms → Bacteria	3814	Open in IMG/M
3300024271\|Ga0224564_1014025	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300024330\|Ga0137417_1262769	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300026304\|Ga0209240_1128977	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	847	Open in IMG/M
3300026309\|Ga0209055_1159022	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300026317\|Ga0209154_1032589	All Organisms → cellular organisms → Bacteria	2387	Open in IMG/M
3300026317\|Ga0209154_1075507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1459	Open in IMG/M
3300026323\|Ga0209472_1130266	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300026332\|Ga0209803_1018392	All Organisms → cellular organisms → Bacteria → Acidobacteria	3503	Open in IMG/M
3300026334\|Ga0209377_1152258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300026355\|Ga0257149_1041368	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300026507\|Ga0257165_1054646	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300026542\|Ga0209805_1102579	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300026551\|Ga0209648_10608226	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300027671\|Ga0209588_1076963	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300027853\|Ga0209274_10100380	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300027855\|Ga0209693_10068012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1755	Open in IMG/M
3300027884\|Ga0209275_10707856	Not Available	580	Open in IMG/M
3300027884\|Ga0209275_10872616	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300027889\|Ga0209380_10473793	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300027903\|Ga0209488_10786873	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300028884\|Ga0307308_10008597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4486	Open in IMG/M
3300028906\|Ga0308309_10681939	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300030940\|Ga0265740_1003231	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300031057\|Ga0170834_109147731	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300031231\|Ga0170824_122950884	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300031720\|Ga0307469_11884724	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300031751\|Ga0318494_10361227	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300031754\|Ga0307475_10085300	All Organisms → cellular organisms → Bacteria	2442	Open in IMG/M
3300031754\|Ga0307475_11513157	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300031768\|Ga0318509_10616392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300031896\|Ga0318551_10339214	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300031962\|Ga0307479_10544634	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300032180\|Ga0307471_100242790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1846	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.11%
Aquatic	Environmental → Aquatic	1.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.11%
Freshwater	Environmental → Aquatic → Freshwater	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.85%
Loam	Environmental → Terrestrial → Soil → Loam	10.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100896231	3300000597	Forest Soil	MKRSAAFIVFFVVLGCALAGLYWSQRRVRSTPVSPNAILSMAADAQRDLSRLPMHLTR
JGI12637J13337_10067012	3300001137	Forest Soil	MKRTVVFIVFFAILGISLGGLYWSQRRTKSSPTSANAVLNIVADAQRDLTRVPMHFTRLS
JGI25612J43240_10553112	3300002886	Grasslands Soil	MKRSVVFVIFFLILGFALAGLYWSQRRPKSTPVSANAILNMAADAQRDLSR
JGI25617J43924_103647092	3300002914	Grasslands Soil	MKRSVVFVVFFLILGFALAGLYWSQRRAKSTPVSANAILNMAADAQRDL
JGI25389J43894_10684021	3300002916	Grasslands Soil	MKRSVVFVVFFLILGFALAGLYWSQRRPKSTPVSANAILNMAADAQRDLSRVPM
Ga0062387_1001217301	3300004091	Bog Forest Soil	MKRAVTFLIFFAILGVALGGLYWSQRRAKSPPVSANAILDMAADAQRDLTRIPM
Ga0062389_1006981092	3300004092	Bog Forest Soil	MKRAVTFLIFFAILGVALGGLYWSQRRAKSPPVSANAILDMAADAQRDLTRIPMHFTRLS
Ga0066677_100942201	3300005171	Soil	MKRSVVFVVFFLILGFALAGLYWSQRRPKSPPVSANAILNMAADAQRDLSR
Ga0066679_107898432	3300005176	Soil	MKRSVVFVVFFLILGFAVAGLYWSQRRPKSSPVSANAILNMAADA
Ga0073909_100798662	3300005526	Surface Soil	MKRTVVFVLFFSIFGFSLAGLYWSQRRAKPTHSSANAVVDMLADAQRDLTRV
Ga0070766_103217222	3300005921	Soil	MKRAAVFVIFFAILGISLAGLYWSQRQAKSPPVSANAILNIAA
Ga0070766_104005252	3300005921	Soil	MKRAVIFIVFFAVLGLSLSGLYWSQRRAKSPPVSANAILNLAAD
Ga0066656_110276712	3300006034	Soil	MKRSVVFVVFFLILSFALAGLYWSQRRPKSTAVSP
Ga0066653_103379132	3300006791	Soil	MKRSVVFVAFFLILGFAVAGLYWSQRRPKSSPVSANAILN
Ga0066658_100035103	3300006794	Soil	MKRSVVFVVFFLILGFALAGLYWSQRRPKSTPVSANAILNMAADAQRDLSRV
Ga0066660_102885682	3300006800	Soil	MKRSVVFVVFSFILGFAPAGRYWSQRRPKSSPVSAN
Ga0079221_106047171	3300006804	Agricultural Soil	MKRPAVFVLFFAILGISLAGLYWSQRRPRSAPASANAVLDM
Ga0079219_115244121	3300006954	Agricultural Soil	MKRSLVFIIFFLILGFALAGVYWSQRRQKSTAVSPNAILNMAA
Ga0099794_100276911	3300007265	Vadose Zone Soil	MKRSVVFVVFFLILGFALAGLYWSQRRPKSTPVSAN
Ga0099795_100281111	3300007788	Vadose Zone Soil	MKRLTIFFVILGFALTALYFSQRRTERTPVSANALLNMAADAQ
Ga0099830_103251321	3300009088	Vadose Zone Soil	MKRPIVFVVFFLILGFALAGLYWSQRRPKSTPVSANAILNMAADA
Ga0099830_106755931	3300009088	Vadose Zone Soil	MKRSVVFVVFFLILGFAVAGLYWSQRRPKSNPVSANAILNMAADAQRDLSRIPMH
Ga0099828_103046942	3300009089	Vadose Zone Soil	MKRPIVFVVFFLILGFALAGLYWSQRRPKSTPVSANAIL
Ga0126373_129255502	3300010048	Tropical Forest Soil	MKRPVVFIVFFLILGFSLAGLYWSQRRQKSTAVSPNAILDMAADAQRDLS
Ga0126372_111360311	3300010360	Tropical Forest Soil	MKRSVVFIVFFLILSFALAGLYWSQRCAKSTAVSPNAILNMA
Ga0134121_100356621	3300010401	Terrestrial Soil	MKRPVVFVLFFAILGFSLAGLYWSQRRAKSTHSSANAVVDMLADAQR
Ga0150983_158310942	3300011120	Forest Soil	MKRSIVFVVFFLILGFALAGLYWSQRRPKSTPVSANAILNMAAD
Ga0137392_104239662	3300011269	Vadose Zone Soil	MKRSVVFVAFFLILGFALAGLYWSQRRSKSAPVSANAILNMAADAQR
Ga0137391_104525391	3300011270	Vadose Zone Soil	MKRPIVFVIFFLILVFALAGLYWSQRRPKSTPVSANAILNMAADAQRDLSRIPMHFTRL
Ga0137391_104574051	3300011270	Vadose Zone Soil	MKRSIVFVVFFLILGVALAGLYWSQRRPKSTAVSPNAILNMAADAQRDLARLPM
Ga0137393_104026361	3300011271	Vadose Zone Soil	MKRPIVFVVFFLILGFALAGLYWSQRRPKSTPVSANAILNMAADAQRDLSRIPMHFTRL
Ga0137389_106226601	3300012096	Vadose Zone Soil	MKRPIVFVMFFLILGLALAGLYWSQRRPKSNPVSANAIINMTADAQRDLSRIPMHFTRL
Ga0137388_108022261	3300012189	Vadose Zone Soil	MKRSVVFVVFFLILGFALAGLYWSQRRLKSNPVSANA
Ga0137388_113858861	3300012189	Vadose Zone Soil	MKRSIVFVVFFLILGFALAGLYWSQRRPKSTPVSANAILNMAADAQRDL
Ga0137382_104756411	3300012200	Vadose Zone Soil	MKRSVVFVVFFLILGFAVAGLYWSQRRPKSSPVSANAILNMAADAQRDL
Ga0137363_101483022	3300012202	Vadose Zone Soil	MKRSVVFVVFFLILGFAVAGLYWSQRRPKSSPVSA
Ga0137363_105287951	3300012202	Vadose Zone Soil	MKRSIVFVVFFLILGFALAGLYWSQRRPKSTPVSANAILNMAADAQRDLSRIPMHF
Ga0137399_102739962	3300012203	Vadose Zone Soil	MKRSVVFVIFFLILGFALAGLYWSQRRPKSTPVSANAIL
Ga0137381_107871462	3300012207	Vadose Zone Soil	MKRSVVFVVFFFILGFALAGLYWSQRRPKSTPVSAN
Ga0137387_106997351	3300012349	Vadose Zone Soil	MKRSVVFVVFFFILGFALAGLYWSQRRPKSTPVSANAILNMAADAQ
Ga0137386_111247371	3300012351	Vadose Zone Soil	MKRSVVFVVFFLILGFAVAGLYWSQRRPQSSPVSAH
Ga0137358_101971142	3300012582	Vadose Zone Soil	MKRSVVFVVFFLILGFALAGLYWSQRRPKSTPVSANAILNMAADAQRDLS
Ga0137419_116260072	3300012925	Vadose Zone Soil	MKRSVVFIVFFLILGFALAGLYWSQRRPKSNPVSANAILNMAADAQRDLSRVPMHF
Ga0137404_113606241	3300012929	Vadose Zone Soil	MKRSVVFVVFFLILGFALAGLYWTQRRPKSTPVSANAILNMAPDAQ
Ga0134078_100667991	3300014157	Grasslands Soil	MKRSVVFVIFFLILSFALAGLYWSQRRLKSTAVSPNAILNMAADAQRDLSRLPM
Ga0137420_13325691	3300015054	Vadose Zone Soil	MKRSVVFVIFFLILGFALAGLYWSQRRPKSTPVSANAILNMAADAQRDL
Ga0137418_106732992	3300015241	Vadose Zone Soil	MKRSVVFVVFFLILGFALAGLYWSQRRLKSSPVSAN
Ga0137418_108299492	3300015241	Vadose Zone Soil	MKRSVVFVVFFFILGFALAGLYWSQRRPKSTPISANAILNMAADDKRDLSRDTMHF
Ga0134089_104218172	3300015358	Grasslands Soil	MKRSVVFVVFFLILGFALAGLYWSQRRPKSPPVSANAILNM
Ga0182032_114346461	3300016357	Soil	MKRSVVFIMFFLILGFSLAGLYWSQRRPKSTAVSPNAILDM
Ga0187780_114148191	3300017973	Tropical Peatland	MKRLIVFLVFFAILAFSLAGLYWSERHHRSAPTSTNAVVDMLADAQRD
Ga0187772_101680401	3300018085	Tropical Peatland	MKRPVVFFVFFAILSISLAGLYWSQRHHQATPTSTNAVVDIVADAQRD
Ga0066655_110222551	3300018431	Grasslands Soil	MKRSVVFVIFFLILSFALAGLYWSQRRLKSTAVSPNAILNM
Ga0066655_113451561	3300018431	Grasslands Soil	MKRSVVFVVFFLILSFALAGLYWSQRRPKSTAVSPNAILNMAADAQRDLSR
Ga0066655_113781712	3300018431	Grasslands Soil	MKRSVLFVIFFLILGFALTGLYWSQRRPKSTPVSANAILNMAADAQRDLSRVPMHFTPLPDQR
Ga0210407_107852262	3300020579	Soil	MKRSVVFVVFFLILGFALAGLYWSQRRSKSTPVSANAILNMAADAQRD
Ga0210407_112998631	3300020579	Soil	MKRPVVFVVFSLILGFALAGLYWSQRRTKSTHVSANAIF
Ga0210406_103838611	3300021168	Soil	MKRALVFLVFFAILGVSLAGLYWSQRRAKSPPVSPNA
Ga0210396_102813561	3300021180	Soil	MKRAVVFVVFFAILGVALAGLYWSQRRAKSPPVSANAVLNIVADAQRDITRVP
Ga0210388_101039741	3300021181	Soil	MKRAVVFIIFFAVLGVSLAGLYWSQRRAQSRPVSPNAILNLAADAQRDLTRVP
Ga0210387_106489212	3300021405	Soil	MKRAIVFIIFFAVLGVSLAGLYWSQRRAKSPPVSANAILNLAADTQRDLTRIPMHFTRLS
Ga0210394_102376302	3300021420	Soil	MKRALVFLVFFAILGVSLAGLYWSQRRAKSPPVTANAILNMAADAQRDL
Ga0210398_109283451	3300021477	Soil	MKRAVVFIIFFAILGVALAGLYWSQRRAKSPPVSANAILNLAADTQRDLTRIPMHFTRLS
Ga0210402_102289772	3300021478	Soil	VKRAVVFIIFFAILGISLAGLYWSQRRAKSPPVSANAILNIAADAQRDL
Ga0210402_102549991	3300021478	Soil	MKRAVVFVIFFAILGISLAGLYWSQRRAKSPPVSANAILNIAADAQR
Ga0210402_111061551	3300021478	Soil	MKRSVVFLVFFLILGFALAGLYWSQRRPKSTPVSANAILNMAADAQRD
Ga0210410_100500421	3300021479	Soil	MKRAVVFIIFFAILGVSLAGLYWSQRRAKSPPVSANAILNIAADTQRDL
Ga0210409_106570552	3300021559	Soil	MKRSTVFVVFFLTLGFALAGLYWSQRRPKSTPVSANAILNMAADAQRDLSRIPMH
Ga0210409_108631942	3300021559	Soil	MKRAVLFVIFFAILGVALGGLYWSQRRAKSPPVSTNAILNIAAD
Ga0126371_137702771	3300021560	Tropical Forest Soil	MKRSFVFVAFFLILGFSLAGLYWSQRRQKSTAVSPNAILDMAADAQRDLSRLPMH
Ga0247669_10008968	3300024182	Soil	MKRPVVFVLFFAILGISLAGLYWSQRRPKSTPASAN
Ga0247665_10094261	3300024219	Soil	MKRPVVFVLFFAILGFSLAGLYWSQRRAKSTHSSANAVVDMLADAQRDLTRVPM
Ga0247679_10017733	3300024251	Soil	MKRPVVFVLFFAILGISLAGLYWSQRRPKSTPASANAVLDMVADAQRDLTRIPMHFTRLS
Ga0224564_10140252	3300024271	Soil	MKRPVVFIVFFAILGCSLAGLYWSQRRAKSTPSSANAVVD
Ga0137417_12627692	3300024330	Vadose Zone Soil	MKRSVVFVIFFLILGFALAGLYWSQRRPKSTPVSANAI
Ga0209240_11289773	3300026304	Grasslands Soil	MKRPVALVVFFLILGFALAGLYWSQRRPKSTPVSANAI
Ga0209055_11590222	3300026309	Soil	MKRSVVFVVFFLILGFAVASLYWSQRRPKSTPVSANAILNMAADAQRDL
Ga0209154_10325891	3300026317	Soil	MKRPVVFVVFFLILGFALAGLYWSQRRQKSTSVSPNAILNMTADAQRDLSRLP
Ga0209154_10755072	3300026317	Soil	MKRSVVFVVFFLILGFAVAGLYWSQRRPKSSPVSANAILNMAADAQR
Ga0209472_11302662	3300026323	Soil	MKRSVVFVVFFLILGFALAGLYWSQRRPKSPPVSANAILN
Ga0209803_10183921	3300026332	Soil	MKRSVVFVVFFLILGFAVAGLYWSQRRPKSSPVSAN
Ga0209377_11522581	3300026334	Soil	MKRSVVFVVFFLILGFAVAGLYWSQRRPKSSPVSANAI
Ga0257149_10413681	3300026355	Soil	MKRSVVFVVFFLILGFALAGLYWSQRRPKSIPVSANAILNMAADAQRDLSRVPMHFTR
Ga0257165_10546462	3300026507	Soil	MKRSVVFVVFFLILGFALAGLYWSQRRPKSTPVSANAILNMAADAQRDL
Ga0209805_11025792	3300026542	Soil	MKRSVVFAVFFLILGFALAGLYWSQRRPKSTPVSANAILNMAA
Ga0209648_106082262	3300026551	Grasslands Soil	MKRSVVFVAFFLILGFALAGLYWSQRRSKSAPVSANAILNMAADAQRDLSRIPMHF
Ga0209588_10769632	3300027671	Vadose Zone Soil	MKRSVVFVVFFLILGFALAGLYWSQRRPKSTPVSANAILNMA
Ga0209274_101003802	3300027853	Soil	MKRSVVFVFFFVILGFSLAGLYWSQRRAKSTPSSANAVVDMLADAQRD
Ga0209693_100680121	3300027855	Soil	MKRAVVFIIFFAILGVSLSGLYWTQRRAKSPPVSANAILNLAADAQRDLTR
Ga0209275_107078561	3300027884	Soil	MKRAVVFAIFFAVLSVSLSGLYWSQRRAKSRPVSPNAILNLAA
Ga0209275_108726161	3300027884	Soil	MKRAVVFVVFFAILGVSLAGLYWSQRRAKSPPVSANAVLNIVADT
Ga0209380_104737931	3300027889	Soil	MKRAVIFIVFFAVLGLSLSGLYWSQRRAKSPPVSANAILNLAADAQRGLV
Ga0209488_107868731	3300027903	Vadose Zone Soil	MKRSVVFVVFFLILGFALAGLYWSQRRAKSTPVSANAILNMAADAQHDL
Ga0307308_100085972	3300028884	Soil	MKRSVVFVVFFLILGFALAGLYWNQRRPKSNPVSAN
Ga0308309_106819391	3300028906	Soil	MKRAVVFATFFAILGISLAGLYWSQRRGKSPPVSANAILNIAADAQRDI
Ga0265740_10032312	3300030940	Soil	MKRAVVFIIFFAILGVALAGLYWSQRRAKSPPVSANAILNLAADTQR
Ga0170834_1091477311	3300031057	Forest Soil	MKRAIVFIIFFAILGVSLAGLYWSQRRAKSPPVSPNAI
Ga0170824_1229508842	3300031231	Forest Soil	MKRSIVFVVFFLILGFALAGLYWSQRRPKSAPVSAN
Ga0307469_118847242	3300031720	Hardwood Forest Soil	MKRAVVFVVFFLILGFAHAGHNWSQRRPKSAPESANAILNIAADAQ
Ga0318494_103612272	3300031751	Soil	MKRSVVFIVFFLVLGFALAGLYWSQRRAKSTAVSPNAILNMAADAQRDF
Ga0307475_100853002	3300031754	Hardwood Forest Soil	MKRPVVLVAFFLILGSALAGLYWSQRRPKSTPVSANA
Ga0307475_115131572	3300031754	Hardwood Forest Soil	MKRSVVFLIFFIILGLALAGLYWSQRRPKSTAVSANAILNMAAD
Ga0318509_106163922	3300031768	Soil	MKRSVVFIVFFLVLGFALAGLYWSQRRAKSTAVSPNAILNM
Ga0318551_103392142	3300031896	Soil	MKRSVVFIVFFLVLGFALAGLYWSQRRAKSTAVSPNAI
Ga0307479_105446341	3300031962	Hardwood Forest Soil	MKRAVVFMIFFAILGVALGGLYWSQRRAKSPPVSAN
Ga0307471_1002427901	3300032180	Hardwood Forest Soil	MKRSVVFVVFFFILGFALAGLYWSQRRPKSTPVSANAILNM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093648

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences