Metagenome / Metatranscriptome Family F093617

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093617
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	103 residues
Representative Sequence	MTSTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVALPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPEQTGNSNAPATTVAQSPAASPGAKP
Number of Associated Samples	83
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	60.00 %
% of genes near scaffold ends (potentially truncated)	3.77 %
% of genes from short scaffolds (< 2000 bps)	9.43 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (85.849 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (56.604 % of family members)
Environment Ontology (ENVO)	Unclassified (54.717 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.547 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.77% β-sheet: 0.00% Coil/Unstructured: 89.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF07676	PD40	23.58
PF00672	HAMP	7.55
PF14685	Tricorn_PDZ	4.72
PF00158	Sigma54_activat	2.83
PF02518	HATPase_c	2.83
PF03572	Peptidase_S41	0.94
PF01817	CM_2	0.94
PF00072	Response_reg	0.94
PF13560	HTH_31	0.94
PF13515	FUSC_2	0.94
PF13646	HEAT_2	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG1605	Chorismate mutase	Amino acid transport and metabolism [E]	0.94

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.85 %
All Organisms	root	All Organisms	14.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.85 %
cellular organisms	root	All Organisms → cellular organisms	14.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	14.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.85 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.38 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.38 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.38 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.38 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.38 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.94 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005187\|Ga0066675_10906294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300006796\|Ga0066665_10487846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300007258\|Ga0099793_10231120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	890	Open in IMG/M
3300009038\|Ga0099829_10036170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3563	Open in IMG/M
3300012349\|Ga0137387_10874281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300012925\|Ga0137419_10340917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1157	Open in IMG/M
3300012927\|Ga0137416_12098452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300015054\|Ga0137420_1168884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300019885\|Ga0193747_1000009	All Organisms → cellular organisms → Bacteria	248640	Open in IMG/M
3300019887\|Ga0193729_1000844	All Organisms → cellular organisms → Bacteria	15943	Open in IMG/M
3300026320\|Ga0209131_1421700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300026538\|Ga0209056_10032310	All Organisms → cellular organisms → Bacteria	4919	Open in IMG/M
3300027678\|Ga0209011_1002102	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7075	Open in IMG/M
3300027846\|Ga0209180_10077733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1870	Open in IMG/M
3300030494\|Ga0310037_10477165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.11%
Aquatic	Environmental → Aquatic	1.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.11%
Sediment	Environmental → Aquatic → Sediment	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.28%
Loam	Environmental → Terrestrial → Soil → Loam	2.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	62.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	25.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.94%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	56.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.77%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066672_102101442	3300005167	Soil	MIPTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVALPEYIGLNQNVRDWRPARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPAASPGAKP*
Ga0066679_101047152	3300005176	Soil	MISTLNFGDSPEAARSSTDPEQLYTREKKFLDERRVLPLVALPEYIGLNQNVRDWRPARSGEWPLADVWLDLLEPSPAETGNSNAPATIVAQSPAASPGAKP*
Ga0066690_100506672	3300005177	Soil	MIPTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVALPEYSGLNQNVRDWRPARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPAASPGAKP*
Ga0066675_109062942	3300005187	Soil	MISTLNFGDLSEAAVSSTDPEQLYTREKKLLGERRVLPLVALPEYIGLSQKVRDWRPARWGERHITDVWRDLLEPRPEQTGNSNATATTVAQSPAASPGAQP*
Ga0070705_1010551672	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RGSAAANSNDTTAGVHLFAWHYSSLSSRVELDSLVSTLTLGETSGSPVSMTDPEQLYAREKKLLEGRRVLPLVVVPEYVGLGQNVRDWMPARWGEWHLADVWLTVPEAGAEQRGNSKAPAPGAKP*
Ga0066681_100185772	3300005451	Soil	MISTLNFGDLSEAAVSSTDPEQLYTREKKLLGEHRVLPLVALPEYIGLSQKVRDWRPARWGERHITDVWRDLLEPRPEQTGNSNATATTVAQSPAASPGAQP*
Ga0066661_103639322	3300005554	Soil	MISTLNFGDSPEAALPSTDPEQLYTREKKFLDERRVLPLVALPEYIGLSQKVRDWRPARWGERHITDVWRDLLEPRPEQTGNSNATATTVAQSPAASPGAQP*
Ga0066691_100128733	3300005586	Soil	MISTLNFGDSPEAALPSTDPEQLYTREKKFLDERRVLPLVALPECIGLSQNVRDWRPARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPAASPGAKP*
Ga0075029_1001152822	3300006052	Watersheds	SSTDPEQLYAREKKLLEERRVLPLVALPEYVGLGQKVRDWMPARWGEWHLADVWLDLPEPVPAQPGNPNGAETPSTSPATASSGAKP*
Ga0075015_1008254511	3300006102	Watersheds	VHLFSWHYSSLSPRVELESMVSTLNFGNSNEAAVSSTDPEQLYAREKKLLEERRVLPLVALPEYVGLGQKVRDWMPARWGEWHLADVWLDLPEPVPAQPGNPNGAETPSTSPATASSGAKP*
Ga0066658_103210431	3300006794	Soil	IGDSLAAAGSSTDPEQLYAREKKLLEERRVLPLVVLPEYIGLSQNVRDWMPAPWGQWHLAEVWLDLPEPGPAQPGKSKATATPVAQLLTTSPGAKP*
Ga0066665_104878462	3300006796	Soil	MISTLNFGDSPEAALSSTDPEQLYTREKKFLNERHVLPLVALPEYIGLSQNVRDWRPARSGEWPLADVWLDLLEPSPAETGNSNAPTTTVAQSPAASPGAKP*
Ga0066659_110961161	3300006797	Soil	LSPRVELESMVSALNIGDSLAAAGSSTDPEQLYAREKKLLEERRVLPLVVLPEYIGLSQNVRDWMPAPWGQWHLAEVWLDLPEPGPAQPGKSKATATPVAQLLTTSPGAKP*
Ga0066660_100755042	3300006800	Soil	MISTLNFGDLSEAAVSSTDPEQLYTREKKLLDERRVLPLVALPEYIGLSQKVRDWRPARWGERHITDVWRDLLEPRPEQTGNSNATATTVAQSPAASPGAQP*
Ga0099793_101351532	3300007258	Vadose Zone Soil	TDPEQLYTREKKFLDERRVLPLVALPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPEQTGNSHAPATTVAQSPAASPGAKP*
Ga0099793_102311202	3300007258	Vadose Zone Soil	VELESMTSTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVALPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPVVSPGAKP*
Ga0099794_101400942	3300007265	Vadose Zone Soil	FAWHYSSLSSRVELESFVSTLNLGESSGSAVSSTDPEQLYAREKRLLEERRVLPLVVLPEYVGLGPNVRDWMPARWGEWHLADVWLDVPESSAEQYGNSNAASPGAKP*
Ga0066710_1006197892	3300009012	Grasslands Soil	MISTLNFGDLSEAAVSSTDPEQLYTREKKLLGERRVLPLVALPEYSGLGQKVRDWRPARWGERHITDVWRDLLEPRPEQTGNSNATATTVAQSPAASPGAKP
Ga0099829_100361702	3300009038	Vadose Zone Soil	VELESMTSTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVSLPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPVVSPGAKP*
Ga0099830_102641712	3300009088	Vadose Zone Soil	VELESMVSTLKFGESTEAAVSATDPEQLYAREKKLLEERCVLPLVVLPEYIGLGQKVRDWMPAQWGEWHLADVWLDLSEPSSAQPSNSNGAATPATQLATASPGAKP*
Ga0099827_100465401	3300009090	Vadose Zone Soil	VELESMISTLNFGDSPEAAVSSTDPEQLYTREKKLLGERRVLLLVALPEYIGLRQNVRDWRPARWGEWHLSGVWLDVLEPRPEQTGNSNATATTVAPSPAASPGAQP
Ga0066709_1007922242	3300009137	Grasslands Soil	MISTLNFGDLSEAAVSSTDPEQLYTREKKLLGEHRVLPLVALPEYIGLSQKVRDWRPARWGERHITDVWRDLLEPRPEQTGNSNATATTVAQSPGASPGAQP*
Ga0099792_105244241	3300009143	Vadose Zone Soil	MTSRLTFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVVLPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPVVSPGAKP*
Ga0137393_101637602	3300011271	Vadose Zone Soil	HLFSWHYSSLSPRVELGSMVTALNFGDSNEAAVSSSDPEQLFAREKKLLEERRVLPLVALPEYVGLSQKVRDWMPARWGEWHLADVWLDLPESSAAQPANSNGTATPAAPPATASPGAKP
Ga0137389_101116901	3300012096	Vadose Zone Soil	AALSSRVELESMTSTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVSLPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPVVSPGAKP*
Ga0137389_106830261	3300012096	Vadose Zone Soil	HYSSLSSRVELESFVSTLNLGESSSSAVSSTDPEQLYAREKRLLEERRVLPLVVLPEYVGLGPNVRDWMPARCGEWYLADILLTVSEPGVEQRGNSNAAAPGAKP*
Ga0137389_111315542	3300012096	Vadose Zone Soil	VELESMMSTLNFGDSNDAAVPLTDPEQLYVRERKLLEERRVLPLVALPEYIGLSQKVRDWMPARWGDWHLADGWLDLPEPRSAQPVSSNA
Ga0137364_100327372	3300012198	Vadose Zone Soil	MISTLNFGDSSEAAVSSTDPEQLYTRAKKLLGERRVLPLVALPEYSGLSQKVRDWRPARWGERHITDVWRDLLEPRPEQTGNSNATATTVAQSPGASPGAQP*
Ga0137364_106204662	3300012198	Vadose Zone Soil	NFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVALPEYTGLRQNVRDWRPARSGEWPLAGVWLDLLEPRPAQTGNSNAPATTVAQSPAASPGAKP*
Ga0137382_101608562	3300012200	Vadose Zone Soil	RVEMESMVNTLKLGNSNAAIVSSTDPEQLYAYEKKLLEDRRVLPLVALPEYIGLSQKVRDWMPAQWGEWHLGDVWLDRSEPGATQPADSNGAAVPATQPGAAPPGAKR*
Ga0137363_100162422	3300012202	Vadose Zone Soil	MTSRLTFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVVLPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPAASPGAKP*
Ga0137399_108052171	3300012203	Vadose Zone Soil	MISTLNFGDSPEAALSSTVPEQLYTREKKFLDERRVLPLVALPEYIGLSQNVRDWMPARWGEWPLADVWLDLLEPSPERTGNSNATATTVAQSPAASPGAKP*
Ga0137399_111961211	3300012203	Vadose Zone Soil	VELESMTSTLNFDDSPEAALSSTDPEQLYTREKKFLDERRVLPLVALPEYIGLSQNVRDWRPARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPVVSPGAKP*
Ga0137362_105445342	3300012205	Vadose Zone Soil	MTSRLTFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVVLPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPAETGNSNLPATTVAQSPVASPGAKP*
Ga0137381_100614281	3300012207	Vadose Zone Soil	TLNFGDLSEAAVSSTDPEPLYTREKKLLGERRVLPLVALPEYSGLSQKVRDWRPARWGERHITDVWRDLLEPRPEQTGNSNATATTVAQSPAASPGAQP*
Ga0137378_104227322	3300012210	Vadose Zone Soil	MISTLNFGDSSDAAVSSTDPEQLYTREKKLLGERRVLPLVALPEYSGLSQKVRDWRPARWGERHITDVWRDLLEPRPEQTGNSNATATTVAQSPGASPGAQP*
Ga0137377_101434502	3300012211	Vadose Zone Soil	MISTLNFGDSSEAAVSSTDPEQLYTREKKLLGERRVLPLVALPEYSGLSQKVRDWRPARWGERHITDVWRDLLEPRPEQTGNSNATATTVAQSPAASPGAQP*
Ga0137377_105118502	3300012211	Vadose Zone Soil	VELESMISTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVALPEYIGLSQNVRDWRPARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPAASPGAKP*
Ga0137387_105171411	3300012349	Vadose Zone Soil	VELESMIPTLNFGDSPEAALSSTDPEQLYTREKKFLNERRVLPLVALPEYIGLSQNVRDWRPARSGEWPLADVWLDLLEPSPAETGNSNAPTTTVAQSPAASPGAKP*
Ga0137387_108742811	3300012349	Vadose Zone Soil	MISTLNFGDLSEAAVSSTDPEPLYTREKKLLGERRVLPLVALPEYIGLSQKVRDWRPARWGERHITDVWRDLLEPRPEQTGNSNATATTVAQSPAASPGAQP*
Ga0137386_105622912	3300012351	Vadose Zone Soil	MISTLNFGDSSEAAVSSSAPEQLYTRAKKLLGERRVLPLVALPEYSGLSQKVRDWRPARWGERHITDVWRDLLEPRPEQTGNSNATATTVAQSPAASPGAQP*
Ga0137361_103080302	3300012362	Vadose Zone Soil	MISTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVVLPEYIGLSQNVRDWRSARSGEWPLADVWLDILEPSPAETGNSN
Ga0137390_105060762	3300012363	Vadose Zone Soil	RVELESMTSTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVSLPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPVVSPGAKP*
Ga0137358_102698972	3300012582	Vadose Zone Soil	VELESMISTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVVLPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPAETGNSNLPATTVAQSPVASPGAKP*
Ga0137396_103267542	3300012918	Vadose Zone Soil	VELESMISTLNFGDSPEAALSSTDPEPLYTREKKFLDERRVLPLVALPEYIGLSQNVRDWRPARSGEWPLAEVWLDLLEPNPAQTGNSNAPATTVAQSPAASPGAKP*
Ga0137396_107202541	3300012918	Vadose Zone Soil	RQAKTVPAALSSRVELESMTSTLNFDDSPEAALSSTDPEQLYTREKKFLDERPVLPLVALPEYIGLSQNVRDWRPARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPVVSPGAKP
Ga0137394_101630741	3300012922	Vadose Zone Soil	LFAWHYSSLSSRVELESFVSTLNLGESSGSAVSSSDPEQLYAREKKLLEDRRVLPLVVLPEYVGLGPNVRDWMPARWGEWHLADVWLDVPEPSKELRGNSNTAAPGAKP*
Ga0137394_109326702	3300012922	Vadose Zone Soil	LFAWHYSSLSSRVELESFVSTLNLGESSGSAVSSTDPEQLYAREKKLLEERRVLPLVVLPEYVGLGPNVRDWMPARWGEWHLADVWLDVPEPSAELRGNSNAASPGAKP*
Ga0137394_110509542	3300012922	Vadose Zone Soil	WHYSSLSSRVELESFVSTLNLEETSGSAVSSTDPGQLYAREKKLLEERRVLPLVVLPEYVGLGPKVRDWMPARWGEWHLADVWLDVPEPSAEQRGNSNAASPGAKP*
Ga0137359_106496422	3300012923	Vadose Zone Soil	MTSRLTFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVLLPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPAETGNSNPPATTVAQSPVASPGAKP*
Ga0137419_103409172	3300012925	Vadose Zone Soil	MTSTLTFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVLLPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPAETGNSNGTATTVAQSPAASPGAKP*
Ga0137419_104005291	3300012925	Vadose Zone Soil	AALSSTDPEQLYTREKKFLDERRVLPLVALPEYIGLSQNVRDWMPARWGEWHLDDVWLDVPEPSPALRGNSNAPATPVAQPPAASPGVKP*
Ga0137419_111511212	3300012925	Vadose Zone Soil	FGDSPEAAVSSADPEQLYEREKRLLEERRVLPLVALPEYIGLSQNVRDWMPARWGEWHLADVWLDLPETSPAQPGNSNATATPAAQPATASPGAKP*
Ga0137419_112993371	3300012925	Vadose Zone Soil	AALSSTDPEQLYAREKKLLEERRVLPLVALPEYIGLSQKVRDWMPARWGEWRLADVWLDLPEPSSSQSGDSNATANPASQAPTASRGAKP*
Ga0137416_104584662	3300012927	Vadose Zone Soil	MISTLNFGDSPEAALSSTDPEQLSTREKKFLDERRVLPLVALPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPEQTGNSNAPATTVAQSPAASPGAKP*
Ga0137416_116448662	3300012927	Vadose Zone Soil	GVELESMISALNLGDSSEAVVSSTDPELLYTREKKLLEDRHVLPLVALPEYIGLSQNVRDWMPARWGEWHLDDVWLDVPEPSPALRGNSNAPATPVAQPPAASPGVKP*
Ga0137416_120984522	3300012927	Vadose Zone Soil	LFSWHYSSLSPSVELESMISTLNFGDLNETAVRSADPEQLYAREKKLLEERRVLPLVALPEYIGLSQKVRDWVPARWGEWHLADVWLDLPEPGAAQPGNSNNTSTPAAQPATVSPGAKP*
Ga0134110_102962832	3300012975	Grasslands Soil	VPAALSSKVELEPMISTLNFGDLSEAAVSSTDPEQLYTREKKLLGEHRVLPLVALPEYIGLSQKVRDWRPARWGERHITDVWRDLLEPRPEQTGNSNATATTVAQSPAASPGAQP*
Ga0137414_10931382	3300015051	Vadose Zone Soil	MTSRLTFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVVLPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPAETGNSNPPATTVAQSPVASPGAKP*
Ga0137420_10735592	3300015054	Vadose Zone Soil	VELESMTSTLTFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVLLPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPVASPGAKP*
Ga0137420_11688841	3300015054	Vadose Zone Soil	GVHAQLESMVSTLNFGDSAEAAASSADPEQLYAREKKLLEERRVLPLVALPEYIGLSQNVRDWMPARWGEWHLADVWLDLPEPSPAQPGNSNATATPAAQPATASPGAKP*
Ga0137420_14031463	3300015054	Vadose Zone Soil	LFAWHYSSLSSRVELESFVSTLNLGEPSGSAVSSSDPEQLYAREKKLLEQRRVLPLVVLPEYVGLGPNVRDWMPARWGEWHLADVWLYVPEPGPEQRGNSNAASPGAKP*
Ga0137418_103191352	3300015241	Vadose Zone Soil	VELESMTSTLTFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVALPEYIGLSQNVRDWRSARSGEWPLADVWLDLVEPSPAETGNSNAPGTTVARSPVASPGAKS*
Ga0137418_109844851	3300015241	Vadose Zone Soil	AALSSTDPEQLYAREKKLLEERRVLPLVALPEYIGLSQKVRDWMPARWGEWRLAEVWLDLPEPSSSQSGDSNAAANPASQAPTASPGAKP*
Ga0137418_112410432	3300015241	Vadose Zone Soil	AWRYSSLSSRVELESFVSTLNLGESSGSAVSSTDPEQLYAREKRLLEERRVLPLVVLPEYVGLGPNVRDWMPARWGEWHLADVWLDVPESSAEQYGNSNAASPGAKP*
Ga0066667_100202532	3300018433	Grasslands Soil	MISTLNFGDLSEAAVSSTDPEQLYTREKKLLGERRVLPLVALPEYIGLSQKVRDWRPARWGERHITDVWRDLLEPRPEQTGNSNAAATTVAQSPGASPGAQP
Ga0066662_126739482	3300018468	Grasslands Soil	LNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVALPEYIGLNQNVRDWRPARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPAASPGAKP
Ga0066669_100301292	3300018482	Grasslands Soil	MISTLNFGDLSEAAVSSTDPEQLYTREKKLLGERRVLPLVALPEYIGLSQKVRDWRPARWGERHITDVWRDLLEPRPEQTGNSNATATTVAQSPAASPGAQP
Ga0193747_100000960	3300019885	Soil	MTSTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVALPEYIGLSQNVRDWRSARSGEWPLADVWLDLVEPSPAETGNSNAPGTTVAQSPVASPGAKP
Ga0193729_10008442	3300019887	Soil	MTSTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVALPEYIGLSQNVRDWRSARSGEWPLADVWLDLVEPSPAETGNSNAPGTTVAQSHVASPGAKP
Ga0193731_100014617	3300020001	Soil	MTSTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVALPEYIGLSQNVRDWRSARSGEWPLADVWLDLVEPSPAETGNSNAPGTTVAQSPV
Ga0193721_10868082	3300020018	Soil	MTSTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVALPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQ
Ga0179590_12308061	3300020140	Vadose Zone Soil	MTSRLTFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVVLPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPAETGNSNP
Ga0179594_100737122	3300020170	Vadose Zone Soil	MTSRLTFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVVLPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPAETGNSNPPATTVAQSPVASPGAKP
Ga0179596_100830022	3300021086	Vadose Zone Soil	MTSRLTFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVVLPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQ
Ga0210408_100244825	3300021178	Soil	MVTALKVGDANSAAVSSTDPEQLYAREKKLLEERRVLPLVALPEYVGLSQKVRDWMPARWGEWHLADVWLDLPEPATAQPGNTNGTEPPANPPATTSPGAKP
Ga0210402_118857212	3300021478	Soil	TAFKLGDSRDAATSSSDPEQLYAREKKLLEERHVLPLIALPEYVGLGQNVRDWMPARWGEWHLADVWLDLPEAPVAGNANAAPTPAPQLAVAALGAKP
Ga0242665_102219202	3300022724	Soil	LESFASAFHLGDSSEGVVSSTDPEQLYAREKKLLEERHVLPLVALPEYVGLGQNVRDWMPARWGEWHLADVWLDSPEPAQAQVGNSNATGSPANPPAAALPGAKP
Ga0209234_10071212	3300026295	Grasslands Soil	MISTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVALPEYTGLRQNVRDWRPARSGEWPLAGVWLDLLEPSPAETGNSNAPATTVAQSPAASPGAKP
Ga0209154_11369681	3300026317	Soil	MIPTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVALPEYIGLNQNVRDWRPARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPAASPGAKP
Ga0209131_14217001	3300026320	Grasslands Soil	SPKVELESMVSTLNFGDSAEAAASSADPEQLYAREKKLLEERRVLPLVALPEYIGLSQNVRDWMPARWGEWHLADVWLDLPEPSPAQPGNSNATATPAAQPATASPGAKP
Ga0209472_10082623	3300026323	Soil	MISTLNFGDLSEAAVSSTDPEQLYTREKKLLGEHRVLPLVALPEYIGLSQKVRDWRPARWGERHITDVWRDLLEPRPEQTGNSNATATTVAQSPAASPGAQP
Ga0209158_11657882	3300026333	Soil	MISTLNFGDSPEAALPSTDPEQLYTREKKFLDERRVLPLVALPECIGLSQNVRDWRPARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPAASPGAKP
Ga0209804_12725061	3300026335	Soil	MIPTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVALPEYSGLNQNVRDWRPARSGEWPLADVWLDLLEPSPAETGNSNAPATT
Ga0257172_10586082	3300026482	Soil	TLNFGDSPEAAVSSADPEQLYEREKRLLEERRVLPLVALPEYIGLSQNVRDWMPARWGEWHLADVWLDLPETSPAQPGNSNATATPAAQPATASPGAKP
Ga0257157_10212841	3300026496	Soil	TLNFGDSAETAASSADPEQLYAREKKLLEERRVLPLVALPEYIGLSQNVRDWMPARWGEWHLADVWLDLPEPSPAQPGNSNATATPAAQPATASPGAKP
Ga0209056_100323103	3300026538	Soil	MISTLNFGDSPEAALSSTDPEQLYTREKKFLNERHVLPLVALPEYIGLSQNVRDWRPARSGEWPLADVWLDLLEPSPAETGNSNAPTTTVAQSPAASPGAKP
Ga0209056_106224001	3300026538	Soil	KVELEPMISTLNFGDLSEAAVSSTDPEQLYTREKKLLGERRVLPLVALPEYIGLSQKVRDWRPARWGERHITDVWRDLLEPRPEQTGNSNATATTVAQSPGASPGAQP
Ga0209648_100092074	3300026551	Grasslands Soil	MISTLNFGDSPEAALSSTVPEQLYTREKKFLEERRVLPPLALPEYIGLSQNVRDWMPARWGEWSLADVWLDLLEPSPERTGNSNATATTVAQSPAASPGAKP
Ga0209577_100574002	3300026552	Soil	MISTLNFGDLSEAAVSSTDPEQLYTREKKLLDERRVLPLVALPEYIGLSQKVRDWRPARWGERHITDVWRDLLEPRPEQTGNSNATATTVAQSPAASPGAQP
Ga0209577_108811651	3300026552	Soil	MISTLNFGDSPEAARSSTDPEQLYTREKKFLDERRVLPLVALPEYSGLRQNVRDWRPARSGEWPLADVWRDLLEPSPAETGNSNAPATIVAQ
Ga0209076_11364092	3300027643	Vadose Zone Soil	MTSTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVALPEYIGLSQNVRDWRPARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPVVSPGAKP
Ga0209076_11995082	3300027643	Vadose Zone Soil	MVSTLNFGDSAEAAASSADPEQLYAREKKLLEERRVLPLVALPEYIGLSQNVRDWMPARWGEWHLADVWLDLPEPSPAQPGNSNATATPAAQPATASPGAKP
Ga0208990_10232791	3300027663	Forest Soil	SAETAASSADPEQLYAREKKLLEERRVLPLVALPEYIGLSQNVRDWMPARWGEWHLADVWLDLPEPSPAQPGNSNATATPAAQPATASPGAKP
Ga0209588_11987472	3300027671	Vadose Zone Soil	ELESFVSTLNLGESSGSAVSSTDPEQLYAREKRLLEERRVLPLVVLPEYVGLGPNVRDWMPARWGEWHLADVWLDVPESSAEQYGNSNAASPGAKP
Ga0209011_10021028	3300027678	Forest Soil	MVSALNIGDSPESAGSSTDPEQLFTREKKLLNERRLLPLVALPEYIGLSQNVRDSMPARWGEWHLADVWLDLPEPRPAQPGNSNATATPVAQSAAASPGAKP
Ga0209180_100777332	3300027846	Vadose Zone Soil	MTSTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVSLPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPVVSPGAKP
Ga0209701_101295043	3300027862	Vadose Zone Soil	MVSTLKFGESTEAAVSATDPEQLYAREKKLLEERRVLPLVALPEYIGLGQKVRDWMPARWGEWHLADVWLDLSEPGSAQPSNSNDAATPATQPATAFPGAKP
Ga0209590_100701902	3300027882	Vadose Zone Soil	MISTLNFGDSPEAAVSSTDPEQLYTREKKLLGERRVLLLVALPEYIGLRQNVRDWRPARWGEWHLSGVWLDVLEPRPEQTGNSNATATTVAPSPAASPGAQP
Ga0209488_100806462	3300027903	Vadose Zone Soil	MTSRLTFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVSLPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPAETGNSNAPATTVAQSPVVSPGAKP
Ga0137415_100649581	3300028536	Vadose Zone Soil	PSVELESMVSTLNFGDSNETAVRSADPEQLYAREKKLLEERRVLPLVALPEYIGLSQKVRDWVPARWGEWHLADVWLDLPEPGAAQPGNSNNTSTPAAQPATVSPGAKP
Ga0137415_100979622	3300028536	Vadose Zone Soil	MTSTLNFGDSPEAALSSTDPEQLYTREKKFLDERRVLPLVALPEYIGLSQNVRDWRSARSGEWPLADVWLDLLEPSPEQTGNSNAPATTVAQSPAASPGAKP
Ga0310037_104771652	3300030494	Peatlands Soil	LFSWHYSSLGPRVELESMVTTLNFGDANEAVVSLADPEQLYAREKKLLEERRVLPLVALPEYVGLGQKVRDWMPARWGEWHLADVWLDLPEPSPAQPGIPNGTETPATQPAAASPGAKP
Ga0073994_100515782	3300030991	Soil	MISTLNFGDSPEAALSSTVAEQLYTREKKFLDERRVLPLLALPEYIGLSQNVRDWMPARWGEWPLADVWLDLLEPSPERTGNSNATATTVAQSPAASPGAKP
Ga0307473_104072012	3300031820	Hardwood Forest Soil	LGDSSEAVVSSTDPELLYAREKKLLEDRHVLPLVALPEYIGLSQNVRDWMPARWGEWHLDDVWLDVAEPSPALPGNSNAPATPVAQPPAASPGVKP
Ga0307472_1012369872	3300032205	Hardwood Forest Soil	LHLFAWHYSSLSSRVELESFVSALNLGESSDSAVSSTDPEQLYAREKKLLEERHVLPLVVLPEYVGLGPNVRDWMPARWGEWHLADVWLDVPEPSAEQRGNSNAVAPGAKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093617

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences