Basic Information | |
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Family ID | F093495 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 106 |
Average Sequence Length | 40 residues |
Representative Sequence | MNMEALSYVKFGDKDGLGEFLFENGVQHQLFYEILGDQGI |
Number of Associated Samples | 75 |
Number of Associated Scaffolds | 106 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Viruses |
% of genes with valid RBS motifs | 62.86 % |
% of genes near scaffold ends (potentially truncated) | 96.23 % |
% of genes from short scaffolds (< 2000 bps) | 87.74 % |
Associated GOLD sequencing projects | 67 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.48 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Duplodnaviria (52.830 % of family members) |
NCBI Taxonomy ID | 2731341 |
Taxonomy | All Organisms → Viruses → Duplodnaviria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (35.849 % of family members) |
Environment Ontology (ENVO) | Unclassified (85.849 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (85.849 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 4.41% β-sheet: 36.76% Coil/Unstructured: 58.82% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.48 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Freshwater Freshwater Lake Lentic Freshwater Freshwater Lake Sediment Freshwater Anoxic Zone Freshwater Freshwater Lake Sediment Freshwater Freshwater Aqueous Marine Fen Fen |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
TBL_comb48_EPIDRAFT_10402836 | 3300000439 | Freshwater | MNNDDLSYVEFGDTEGLGRFLFENGVQHQLFYEILADQGI |
JGI24028J26656_10155971 | 3300002091 | Lentic | MNMNDLSYVRFGDKDGLGQFLFENGVQHRLFSQVLADNNILYP |
JGI24028J26656_10165393 | 3300002091 | Lentic | MEALSYVKFGDKDGLGLFLFENGVQHQLFYEILADKGIAIQKYP |
JGI24028J26656_10238133 | 3300002091 | Lentic | MNMEALSYVRFGDKDGLGLFLFENGVQHQLFYEILADKGIAIQKY |
JGI24218J26658_10179791 | 3300002092 | Lentic | MNFEVLSYVKFGDKDGLGEFLFENGVQHQLFYEQLADAGI |
JGI24890J29729_10286841 | 3300002307 | Lentic | MNMNDLSYVRFGDKDGLGQFLFENGVQHRLFSQVLADNNILYPNTPSLMPAQRT* |
JGI25908J49247_100945763 | 3300003277 | Freshwater Lake | MEVLSYVKFGDKDGLGEFLFENGVQHQLFYEILGDNGIAV |
Ga0066223_10195984 | 3300004461 | Marine | MNMDNLSYVEFGDVDGLGTMLFENGVQHRLFYEQLADKGILIPQYT* |
Ga0066223_11155064 | 3300004461 | Marine | MNMDDLSYVEFGDVDGLGAMLFENGVQHKLFYEQLADKGILIPQYPLIDA |
Ga0007797_12020041 | 3300004771 | Freshwater | LNMDALSYVKFGDKDGLAEMLWENGVQHRLFHQILADQNITYPK |
Ga0007798_101094331 | 3300004775 | Freshwater | MNFETLSYVKFGDKEGLGEFLFENGVQHQTFYNILGDLGI |
Ga0068872_107627801 | 3300005528 | Freshwater Lake | MESLSYVKFGDKDGLGEFLFENGVQHQLFYEILGDNGIAVQK |
Ga0007825_10123791 | 3300006125 | Freshwater | VNNDDLSYVEFGDTEGLGRFLFENGVQHQLFYEIL |
Ga0075464_101728881 | 3300006805 | Aqueous | MNMDDLSTLEFGDVDGLGRFLFENGVQHKLFYETLA |
Ga0075464_111048212 | 3300006805 | Aqueous | MNFEVLSYVKFGDKDGLGEFLFENGVQHQLFYEILADRG |
Ga0114962_101843831 | 3300009151 | Freshwater Lake | MNMDDLSYVEFGDVDGLGKMLFENGVQHKLFYEQLAD |
Ga0114962_105679703 | 3300009151 | Freshwater Lake | MNMNDLSYVRFGDKDGLGQFLFENGVQHRLFSQVLADQNILY |
Ga0114963_102268954 | 3300009154 | Freshwater Lake | LNNDNLSYVEFGDTEGLGRFLFENGVQHQLFYEILADKGI |
Ga0114963_105502153 | 3300009154 | Freshwater Lake | MNMDALSYVKFGDKDGLAEMLFENGVQHRLFHQIVTDT |
Ga0114968_103663534 | 3300009155 | Freshwater Lake | LNNDNLSYVEFGDTEGLGRFLFENGVQHQLFYEILADKGILVQK |
Ga0114968_104771913 | 3300009155 | Freshwater Lake | MNMEALSYVKFGDKDGLGEFLFENGVQHQTFYNILGDQGIAVQKY |
Ga0114968_107537481 | 3300009155 | Freshwater Lake | MNFDDLSTVEFGDVDGLGRMLFENGLQHQLFYDILGDR |
Ga0114978_104705873 | 3300009159 | Freshwater Lake | MNMEALSYVKFGDKDGLGEFLFENGVQHQTFYNILGDQGIAIQKY |
Ga0114978_105470993 | 3300009159 | Freshwater Lake | MNMDDLSYVEFGDVDGLGVMLFENGVQHKLFYEQLADKGILIPQYPLIDA |
Ga0114966_103826044 | 3300009161 | Freshwater Lake | MEALSYVKFGDKDGLGEFLFENGVQHQLFYNILGDQGIVVQKYPL |
Ga0114966_108202522 | 3300009161 | Freshwater Lake | MDALSYVKFGDKDGLAEMLFENGVQHRLFHQIITDT |
Ga0114975_103174082 | 3300009164 | Freshwater Lake | MNMENLSYVQFGDRDGLGEMLFENGVQHQLFYEILADQGILVPKYP |
Ga0114979_101437491 | 3300009180 | Freshwater Lake | MEALSYVKFGDKDGLGEFLFENGVQHQLFYEILADQGILIP |
Ga0114979_107258481 | 3300009180 | Freshwater Lake | MNMESLSYVKFGDKDGLGEFLFENGVQHQLFYEILA |
Ga0114959_100649771 | 3300009182 | Freshwater Lake | MNMNDLSYVRFGDKDGLGQFLFENGVQHRLFSQIL |
Ga0114974_102562791 | 3300009183 | Freshwater Lake | MNMNDLSYVRFGDKDGLGQFLFENGVQHRLFHQIL |
Ga0114974_107133483 | 3300009183 | Freshwater Lake | MNMDDLSYVEFGDVDGLGTMLFENGVQHKLFYEQLADRG |
Ga0114974_107936373 | 3300009183 | Freshwater Lake | MNMEALSYVKFGDKDGLGEFLFENGVQHQTFYNILGDQ |
Ga0114976_100855261 | 3300009184 | Freshwater Lake | MNMNDLSYVRFGDKDGLGQFLFENGVQHRLFSQILADNN |
Ga0114976_105900292 | 3300009184 | Freshwater Lake | MNMENLSYVQFGDRDGLGEMLFENGVQHQLFYEILADQG |
Ga0114958_100308231 | 3300009684 | Freshwater Lake | MNMDDLSYVEFGDVDGLGTMLFENGVQHRLFYEQLADKGI |
Ga0114964_102947071 | 3300010157 | Freshwater Lake | LNNDNLSYVEFGDTEGLGRFLFENGVQHQLFYEILADKG |
Ga0136644_100501891 | 3300010334 | Freshwater Lake | MDALSYVKFGDKDGLGEMLFENGVQHRLFHQILADVGIS |
Ga0136644_101592591 | 3300010334 | Freshwater Lake | MNMDALSYVKFGDKDGLGEMLFENGVQHRLFHQILADVGIS |
Ga0157549_12995604 | 3300012732 | Freshwater | MDNLSYVEFGDRDGLGVMLFENGVQHKLFYEQLADKGILIPQYPIIDADPEN |
Ga0182021_112741103 | 3300014502 | Fen | MNMNDLSYVRFGDKDGLGQFLFENGVQHRLFSQILADNNILYP |
Ga0181338_10144255 | 3300015050 | Freshwater Lake | MNMDDLSYVEFGDVDGLGAMLFENGVQHKLFYEQLAD |
Ga0181338_10203194 | 3300015050 | Freshwater Lake | MEVLSYVKFGDKDGLGEFLFENGVQHQLFYEILGDNGIAVQK |
Ga0181338_10360221 | 3300015050 | Freshwater Lake | MNMDVLSYVKFGDKDGLGEFLFENGMQHQLFYDILGDNG |
Ga0181339_10040386 | 3300017700 | Freshwater Lake | MNMEALSYVKFGDKDGLGEFLFENGMQHQLFYDILGD |
Ga0181339_10315261 | 3300017700 | Freshwater Lake | MNMNDLSYVKFGDKDGLGQFLFENGVQHRLFHEILADNNI |
Ga0181350_10905391 | 3300017716 | Freshwater Lake | MNMDVLSYVKFGDKDGLGEFLFENGMQHQLFYDILGDNGIAVQKY |
Ga0181350_11060853 | 3300017716 | Freshwater Lake | MDDLSYVEFGDVDGLGAMLFENGVQHKLFYEQLADRGILIPQYP |
Ga0181347_10921282 | 3300017722 | Freshwater Lake | METLSYVKFGDKDGLGEFLFENGVQHQLFYEILGDNGIAVS |
Ga0181362_10054591 | 3300017723 | Freshwater Lake | MNMEALSYVKFGDKDGLGEFLFENGMQHQLFYDILGDIGI |
Ga0181352_10534264 | 3300017747 | Freshwater Lake | MNMEALSYVKFGDKDGLGEFLFENGVQHQLFYEILGDN |
Ga0181344_12398823 | 3300017754 | Freshwater Lake | MNDLSYVKFGDKDGLGQFLFENGVQHRLFHEILADNNILYPKYP |
Ga0181344_12408533 | 3300017754 | Freshwater Lake | MNMDDLSYVEFGDRDGLGTMLFENGVQHKLFYEQLADRGILIPQYPL |
Ga0181356_11425041 | 3300017761 | Freshwater Lake | VNMETLSYVKYGDKDGLGEFLFENGVQHQLFYEILADQGI |
Ga0181358_11844383 | 3300017774 | Freshwater Lake | MNMDVLSYVKFGDKDGLGEFLFENGMQHQLFYDILGDNGIAVQ |
Ga0181357_11742633 | 3300017777 | Freshwater Lake | MNMDDLSYVEFGDVDGLGAMLFENGVQHKLFYEQLADRGILIPQY |
Ga0181357_12472753 | 3300017777 | Freshwater Lake | MNMDILSYVKFGDKDGLGEFLFENGMQHQLFYDILGDNGIAVQKY |
Ga0181349_10810631 | 3300017778 | Freshwater Lake | MNMDVLSYVKFGDKDGLGEFLFENGMQHQLFYDILGDN |
Ga0181349_11393673 | 3300017778 | Freshwater Lake | MEALLYVKFGDKDGLGEFLFENGMQHQLFYDILGDNGIAVQKYPL |
Ga0181346_10745891 | 3300017780 | Freshwater Lake | MNMEALSYVKFGDKDGLGEFLFENGMQHQLFYDIL |
Ga0181346_11321403 | 3300017780 | Freshwater Lake | MEVLSYVKFGDKDGLGEFLFENGVQHQLFYEILGDNG |
Ga0181348_12170533 | 3300017784 | Freshwater Lake | MDDLSYVEFGDVDGLGAMLFENGVQHKLFYEQLAD |
Ga0181361_1021381 | 3300019783 | Freshwater Lake | MDMDNLSYVEFGDVDGLGVMLFENGVQHKLFYEQLADKGIL |
Ga0214198_10386443 | 3300020710 | Freshwater | MNNDDLSYVEFGDTEGLGRFLFENGVQHQLFYEILADQGILVQK |
Ga0214196_10112231 | 3300021132 | Freshwater | MEILSIVKFGDPESLGEFLFENGTQHLLFWENLADQ |
Ga0214192_10464111 | 3300021142 | Freshwater | MNNDDLSYVEFGDTEGLGRFLFENGVQHQLFYEIL |
Ga0194048_103156183 | 3300021519 | Anoxic Zone Freshwater | MNMDDLSYVEFGDVDGLGAMLFENGVQHKLFYEQLADRG |
Ga0181351_10929494 | 3300022407 | Freshwater Lake | MEALSYVKFGDKDGLGEFLFENGVQHQLFYEILADN |
Ga0181351_11011701 | 3300022407 | Freshwater Lake | MNMEALSYVKFGDKDGLGEFLFENGMQHQLFYDILGDNGIAVQKY |
Ga0228701_10978921 | 3300022746 | Freshwater | MNMEALSYVQFGDKDGLGEMLFENGVQHQLFYEILADQGILIPKYPLTDA |
Ga0228703_11084281 | 3300022747 | Freshwater | MNMEALSYVKFGDRDGLGEMLFENGVQHQLFYEILADQGIL |
Ga0214923_100532535 | 3300023179 | Freshwater | MESLSSVEFGDKDGLRVMLFENQMQHQLFFDTLADRNI |
Ga0214923_104042113 | 3300023179 | Freshwater | VNFEVLSYVKFGDRDGLGEFLFENGVQHQLFYEILADSGILIPK |
Ga0208385_10323601 | 3300025363 | Freshwater | MNNDDLSYVEFGDTEGLGRFLFENGIQHQLFYEILADQGIL |
Ga0208256_10548173 | 3300025382 | Freshwater | MEALSYVKFGDRDGLGEFLFENGVQHRLFHQILADKG |
Ga0208739_10055091 | 3300025426 | Freshwater | MNNDDLSYVEFGDTEGLGRFLFENGVQHQLFYEILA |
Ga0208248_10091567 | 3300025595 | Freshwater | MNMNDLSYVRFGDKDGLGQFLFENGVQHRLFSQVLADQNILYPK |
Ga0208248_11174882 | 3300025595 | Freshwater | MDALSYVKFGDKDGLAEMLFENGVQHRLFHQIITDTGVTYP |
Ga0208613_10855383 | 3300025616 | Freshwater | MEALSYVKFGDKDGLGEFLFENGVQHQLFYNILGDQG |
Ga0209499_11036295 | 3300027712 | Freshwater Lake | MNMEALSYVKFGDKDGLGEFLFENGVQHQLFYEILGDQGI |
Ga0209087_11187924 | 3300027734 | Freshwater Lake | MNMENLSYVQFGDRDGLGEMLFENGVQHQLFYEILADQ |
Ga0209087_11599345 | 3300027734 | Freshwater Lake | MNMDDLSYVEFGDVDGLGVMLFENGIQHKLFYEQLADN |
Ga0209190_12318751 | 3300027736 | Freshwater Lake | MNMDALSYVKFGDKDGLAEMLFENGVQHRLFHQIVTDTGVTYP |
Ga0209189_10196581 | 3300027747 | Freshwater Lake | MNFETLSYVKFGDKEGLGEFLFENGVQHQTFYNILGDQGIAVQKY |
Ga0209189_11549353 | 3300027747 | Freshwater Lake | MNMDALSYVKFGDKEGLAEMLWENGVQHRLFHQIVTDT |
Ga0209084_10613673 | 3300027749 | Freshwater Lake | MNMNDLSYVRFGDKDGLGQFLFENGVQHRLFSQILADN |
Ga0209088_102080493 | 3300027763 | Freshwater Lake | MEALSYVKFGDKDGLGEFLFENGVQHQLFYEILADQGI |
Ga0209086_101611421 | 3300027770 | Freshwater Lake | MDMDNLSYVEFGDRDGLGRMLFENGVQHRLFYEQLADKGIL |
Ga0209086_103701173 | 3300027770 | Freshwater Lake | MNMDALSYVKFGDKEGLAEMLWENGVQHRLFHQII |
Ga0209353_102587562 | 3300027798 | Freshwater Lake | MEALSYVKFGDKDGLGEFLFENGVQHQLFYEILADNGIA |
Ga0209358_104845123 | 3300027804 | Freshwater Lake | MEALSYVKFGDKDGLGEFLFENGVQHQLFYEILGDNGIAVQKY |
Ga0209354_103515593 | 3300027808 | Freshwater Lake | MDNLSYVEFGDVDGLGVMLFENGVQHKLFYEQLADKGILI |
Ga0209777_105861931 | 3300027896 | Freshwater Lake Sediment | MNNDDLSYVEFGDTEGLGRFLFENGVQHQLFYEILADQGILVQKY |
Ga0209299_12236401 | 3300027974 | Freshwater Lake | MNMDDLSYVEFGDVDGLGVMLFENGVQHKLFYEQLADKG |
Ga0304729_10210031 | 3300028392 | Freshwater Lake | LNNDNLSYVEFGDTEGLGRFLFENGVQHQLFYEILADKGILVQKY |
Ga0304728_10204411 | 3300028393 | Freshwater Lake | MDALSYVKFGDKDGLAEMLFENGVQHRLFHQIVTDTGVTYP |
Ga0304728_12178811 | 3300028393 | Freshwater Lake | MNMNDLSYVRFGDKDGLGQFLFENGVQHRLFSQILADNNILY |
Ga0302323_1010517294 | 3300031232 | Fen | MDMDNLSYVEFGDVDGLGRMLFENGVQHRLFYEQLADKGILIPQ |
Ga0311364_123041863 | 3300031521 | Fen | MDNLSYVEFGDVDGLGRMLFENGVQHRLFYEQLADKGILIPQYP |
Ga0315909_103607511 | 3300031857 | Freshwater | MNFDDLTTVKFGDVDGLGRMLFENGLQHRLFYNILGD |
Ga0315902_101623871 | 3300032093 | Freshwater | MNFEALNAVKFGDRDSLGEFLFENGLEHRVFQQTFMD |
Ga0315268_120753371 | 3300032173 | Sediment | MNMEALSYVKFGDKDGLGEFLFENGVQHQLFYEILGD |
Ga0316222_10624871 | 3300032561 | Freshwater | MNNDDLSYVEFGDTEGLGRFLFENGVQHQLFYEILADQGILVQ |
Ga0335027_0429766_3_107 | 3300034101 | Freshwater | MEVLSYVRFGDRDGLQEFLFENGVQHQLFYEILAD |
Ga0335027_0869016_392_514 | 3300034101 | Freshwater | MESLSYVKFGDKDGLGEFLFENGVQHQLFYEILGDNGIAVQ |
Ga0335036_0360404_3_107 | 3300034106 | Freshwater | MEALSYVKFGDKDGLGEFLFENGVQHQLFYEILGD |
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