Metagenome / Metatranscriptome Family F093472

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093472
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	61 residues
Representative Sequence	MARIGRKSTLEWIKEDYTSNPRRFCCEVIGMISNLIASLILMWYSPNPPMFIAYIFFLI
Number of Associated Samples	89
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	59.43 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	88.68 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (37.736 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (25.472 % of family members)
Environment Ontology (ENVO)	Unclassified (56.604 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (92.453 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.77% β-sheet: 0.00% Coil/Unstructured: 40.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF01832	Glucosaminidase	16.04
PF00127	Copper-bind	6.60
PF07681	DoxX	6.60
PF04055	Radical_SAM	5.66
PF00111	Fer2	4.72
PF02657	SufE	1.89
PF01521	Fe-S_biosyn	0.94
PF00106	adh_short	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	6.60
COG4270	Uncharacterized membrane protein	Function unknown [S]	6.60
COG2166	Sulfur transfer protein SufE, Fe-S cluster assembly	Posttranslational modification, protein turnover, chaperones [O]	1.89
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.26 %
Unclassified	root	N/A	37.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	48.11 %
Unclassified	root	N/A	37.74 %
Viruses	superkingdom	All Organisms → Viruses	14.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.74 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.08 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	16.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.15 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	13.21 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	2.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.15 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	13.21 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.26 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.15 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	13.21 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	8.49 %
Thaumarchaeota incertae sedis	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis	2.83 %
Legionellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales	0.94 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.15 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	13.21 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	8.49 %
Candidatus Nitrosopelagicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus	2.83 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	0.94 %
unclassified Legionellales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.15 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	13.21 %
Candidatus Endolissoclinum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum	8.49 %
unclassified Candidatus Nitrosopelagicus	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus	2.83 %
Legionellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	0.94 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.15 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	13.21 %
unclassified Candidatus Endolissoclinum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum	8.49 %
Candidatus Nitrosopelagicus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	2.83 %
Legionellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	0.94 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.15 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	13.21 %
Candidatus Endolissoclinum sp. TMED37	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	8.49 %
Candidatus Nitrosopelagicus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	2.83 %
Legionellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	0.94 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000149\|LPaug09P1610mDRAFT_c1038591	Not Available	564	Open in IMG/M
3300001834\|ACM2_1083134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	556	Open in IMG/M
3300001966\|GOS2245_1074503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	1012	Open in IMG/M
3300005838\|Ga0008649_10300230	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	601	Open in IMG/M
3300005946\|Ga0066378_10243319	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300006810\|Ga0070754_10294735	Not Available	729	Open in IMG/M
3300006870\|Ga0075479_10137336	All Organisms → Viruses → Predicted Viral	1002	Open in IMG/M
3300007116\|Ga0101667_1044842	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	787	Open in IMG/M
3300007234\|Ga0075460_10027238	All Organisms → cellular organisms → Bacteria → Proteobacteria	2225	Open in IMG/M
3300007539\|Ga0099849_1345875	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300007960\|Ga0099850_1288435	Not Available	625	Open in IMG/M
3300009508\|Ga0115567_10482494	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	756	Open in IMG/M
3300009705\|Ga0115000_10565203	Not Available	711	Open in IMG/M
3300009705\|Ga0115000_10844639	Not Available	561	Open in IMG/M
3300009705\|Ga0115000_10949091	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	525	Open in IMG/M
3300009911\|Ga0132221_1008654	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300010299\|Ga0129342_1215352	Not Available	678	Open in IMG/M
3300012936\|Ga0163109_11190728	Not Available	556	Open in IMG/M
3300012954\|Ga0163111_11345909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	702	Open in IMG/M
3300012954\|Ga0163111_12211331	Not Available	557	Open in IMG/M
3300012954\|Ga0163111_12509326	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300017708\|Ga0181369_1005285	Not Available	3446	Open in IMG/M
3300017708\|Ga0181369_1100103	Not Available	603	Open in IMG/M
3300017708\|Ga0181369_1106157	Not Available	581	Open in IMG/M
3300017713\|Ga0181391_1001443	All Organisms → cellular organisms → Bacteria	7000	Open in IMG/M
3300017719\|Ga0181390_1032932	Not Available	1609	Open in IMG/M
3300017721\|Ga0181373_1008069	All Organisms → Viruses → Predicted Viral	1996	Open in IMG/M
3300017734\|Ga0187222_1037785	Not Available	1142	Open in IMG/M
3300017743\|Ga0181402_1008024	All Organisms → Viruses → Predicted Viral	3255	Open in IMG/M
3300017743\|Ga0181402_1116941	Not Available	684	Open in IMG/M
3300017753\|Ga0181407_1078965	Not Available	841	Open in IMG/M
3300017755\|Ga0181411_1021592	All Organisms → Viruses → Predicted Viral	2086	Open in IMG/M
3300017762\|Ga0181422_1197770	Not Available	606	Open in IMG/M
3300017781\|Ga0181423_1087882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1223	Open in IMG/M
3300017949\|Ga0181584_10690814	Not Available	611	Open in IMG/M
3300017952\|Ga0181583_10234284	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	1191	Open in IMG/M
3300017952\|Ga0181583_10660668	Not Available	624	Open in IMG/M
3300017957\|Ga0181571_10764384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	574	Open in IMG/M
3300017958\|Ga0181582_10163772	All Organisms → cellular organisms → Bacteria → Proteobacteria	1542	Open in IMG/M
3300017958\|Ga0181582_10510293	Not Available	747	Open in IMG/M
3300017962\|Ga0181581_10722331	Not Available	598	Open in IMG/M
3300017967\|Ga0181590_10498995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	848	Open in IMG/M
3300017968\|Ga0181587_11014339	Not Available	507	Open in IMG/M
3300018049\|Ga0181572_10676902	Not Available	622	Open in IMG/M
3300018417\|Ga0181558_10167255	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	1289	Open in IMG/M
3300018421\|Ga0181592_10352277	All Organisms → Viruses → Predicted Viral	1052	Open in IMG/M
3300018421\|Ga0181592_10451816	Not Available	897	Open in IMG/M
3300018424\|Ga0181591_10055198	Not Available	3326	Open in IMG/M
3300018424\|Ga0181591_10245830	All Organisms → Viruses → Predicted Viral	1387	Open in IMG/M
3300018424\|Ga0181591_10663422	Not Available	738	Open in IMG/M
3300018424\|Ga0181591_10994712	Not Available	570	Open in IMG/M
3300020189\|Ga0181578_10336351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	682	Open in IMG/M
3300020246\|Ga0211707_1018232	Not Available	993	Open in IMG/M
3300020365\|Ga0211506_1165632	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300020391\|Ga0211675_10016571	All Organisms → cellular organisms → Bacteria	3910	Open in IMG/M
3300020392\|Ga0211666_10233371	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300020410\|Ga0211699_10363577	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	570	Open in IMG/M
3300020413\|Ga0211516_10019964	All Organisms → Viruses → Predicted Viral	3728	Open in IMG/M
3300020420\|Ga0211580_10162060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	930	Open in IMG/M
3300020428\|Ga0211521_10268068	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	765	Open in IMG/M
3300020437\|Ga0211539_10003180	All Organisms → cellular organisms → Bacteria	6836	Open in IMG/M
3300020437\|Ga0211539_10027935	All Organisms → cellular organisms → Bacteria	2212	Open in IMG/M
3300020451\|Ga0211473_10167947	All Organisms → Viruses → Predicted Viral	1129	Open in IMG/M
3300020460\|Ga0211486_10065138	Not Available	1671	Open in IMG/M
3300020461\|Ga0211535_10098078	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1247	Open in IMG/M
3300020469\|Ga0211577_10554668	Not Available	690	Open in IMG/M
3300020472\|Ga0211579_10652170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	588	Open in IMG/M
3300021356\|Ga0213858_10601465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	500	Open in IMG/M
3300021959\|Ga0222716_10467810	Not Available	716	Open in IMG/M
3300021960\|Ga0222715_10347493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	827	Open in IMG/M
3300022857\|Ga0222653_1043353	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	726	Open in IMG/M
3300022935\|Ga0255780_10088687	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	1852	Open in IMG/M
3300022935\|Ga0255780_10345168	Not Available	684	Open in IMG/M
3300022937\|Ga0255770_10421699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	573	Open in IMG/M
3300023081\|Ga0255764_10035401	All Organisms → Viruses → Predicted Viral	3204	Open in IMG/M
3300023081\|Ga0255764_10381996	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	616	Open in IMG/M
3300023115\|Ga0255760_10315182	Not Available	763	Open in IMG/M
3300023116\|Ga0255751_10214414	All Organisms → Viruses → Predicted Viral	1066	Open in IMG/M
3300023176\|Ga0255772_10502771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	583	Open in IMG/M
3300023180\|Ga0255768_10120477	All Organisms → Viruses → Predicted Viral	1715	Open in IMG/M
3300023231\|Ga0222689_1042395	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	582	Open in IMG/M
3300023237\|Ga0222650_1049251	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	704	Open in IMG/M
3300023685\|Ga0228686_1029471	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300023695\|Ga0228680_1002945	All Organisms → cellular organisms → Bacteria	1774	Open in IMG/M
3300023699\|Ga0228695_1005193	All Organisms → cellular organisms → Bacteria	1744	Open in IMG/M
3300024226\|Ga0228667_1072002	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300024420\|Ga0228632_1113437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300025120\|Ga0209535_1154726	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	716	Open in IMG/M
3300025646\|Ga0208161_1163572	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300025653\|Ga0208428_1126487	Not Available	701	Open in IMG/M
3300025655\|Ga0208795_1183068	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	502	Open in IMG/M
3300025687\|Ga0208019_1048643	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300025701\|Ga0209771_1179545	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	628	Open in IMG/M
3300025751\|Ga0208150_1210866	Not Available	597	Open in IMG/M
3300025771\|Ga0208427_1156479	Not Available	749	Open in IMG/M
3300025889\|Ga0208644_1375177	Not Available	533	Open in IMG/M
3300026462\|Ga0247568_1009965	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300026470\|Ga0247599_1004720	All Organisms → Viruses → Predicted Viral	2590	Open in IMG/M
3300027791\|Ga0209830_10118648	All Organisms → Viruses → Predicted Viral	1295	Open in IMG/M
3300027791\|Ga0209830_10418889	Not Available	566	Open in IMG/M
3300028333\|Ga0247595_1036627	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300029448\|Ga0183755_1090207	Not Available	628	Open in IMG/M
3300031594\|Ga0302131_1041370	All Organisms → Viruses → Predicted Viral	1768	Open in IMG/M
3300031597\|Ga0302116_1121323	Not Available	839	Open in IMG/M
3300031608\|Ga0307999_1034046	All Organisms → Viruses → Predicted Viral	1232	Open in IMG/M
3300032011\|Ga0315316_11523402	Not Available	525	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	96.23%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	2.83%
Freshwater	Environmental → Aquatic → Freshwater	0.94%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	28.30%
Coastal	Environmental → Aquatic → Marine → Coastal	20.75%
Oceanic	Environmental → Aquatic → Marine → Oceanic	18.87%
Unclassified	Environmental → Aquatic → Marine → Unclassified	17.92%
Strait	Environmental → Aquatic → Marine → Strait	8.49%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	2.83%
Pond	Environmental → Aquatic → Freshwater → Pond	0.94%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.94%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.94%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	25.47%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	20.75%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	17.92%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	14.15%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	8.49%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.72%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	25.47%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	15.09%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	13.21%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	11.32%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	8.49%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	8.49%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	3.77%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	2.83%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.89%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.89%
Meromictic Pond	Environmental → Aquatic → Freshwater → Pond → Unclassified → Meromictic Pond	0.94%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.94%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.94%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.94%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.94%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.94%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.94%
Volcanic Co2 Seep Seawater	Environmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seep Seawater	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000149	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P16 10m	Environmental	Open in IMG/M
3300001834	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM2, ROCA_DNA019_0.2um_2g	Environmental	Open in IMG/M
3300001966	Marine microbial communities from Roca Redonda, Equador - GS030	Environmental	Open in IMG/M
3300005838	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_130m_DNA	Environmental	Open in IMG/M
3300005946	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_DCM_ad_71m_LV_A	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300007116	Seawater microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble' site, waterEBis3	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009911	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 6, surface; RNA IDBA-UD	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017721	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG	Environmental	Open in IMG/M
3300017734	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020189	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020246	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX555934-ERR599105)	Environmental	Open in IMG/M
3300020365	Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX555943-ERR599143)	Environmental	Open in IMG/M
3300020391	Marine microbial communities from Tara Oceans - TARA_B100000989 (ERX556130-ERR598967)	Environmental	Open in IMG/M
3300020392	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX555916-ERR599163)	Environmental	Open in IMG/M
3300020410	Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)	Environmental	Open in IMG/M
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental	Open in IMG/M
3300020420	Marine microbial communities from Tara Oceans - TARA_B100001248 (ERX556094-ERR599142)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020437	Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)	Environmental	Open in IMG/M
3300020451	Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)	Environmental	Open in IMG/M
3300020460	Marine microbial communities from Tara Oceans - TARA_A100001037 (ERX555931-ERR599097)	Environmental	Open in IMG/M
3300020461	Marine microbial communities from Tara Oceans - TARA_B100000401 (ERX556127-ERR599150)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300020472	Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300022857	Saline water microbial communities from Ace Lake, Antarctica - #419	Environmental	Open in IMG/M
3300022935	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG	Environmental	Open in IMG/M
3300022937	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG	Environmental	Open in IMG/M
3300023081	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG	Environmental	Open in IMG/M
3300023115	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300023231	Saline water microbial communities from Ace Lake, Antarctica - #1231	Environmental	Open in IMG/M
3300023237	Saline water microbial communities from Ace Lake, Antarctica - #367	Environmental	Open in IMG/M
3300023685	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 50R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023695	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 21R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023699	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 81R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024226	Seawater microbial communities from Monterey Bay, California, United States - 81D	Environmental	Open in IMG/M
3300024420	Seawater microbial communities from Monterey Bay, California, United States - 40D	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025655	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025687	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025701	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025771	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300026462	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 17R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026470	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 73R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027791	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)	Environmental	Open in IMG/M
3300028333	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 60R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300031594	Marine microbial communities from Western Arctic Ocean, Canada - CB9_20m	Environmental	Open in IMG/M
3300031597	Marine microbial communities from Western Arctic Ocean, Canada - AG5_SCM	Environmental	Open in IMG/M
3300031608	Marine microbial communities from water near the shore, Antarctic Ocean - #1	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPaug09P1610mDRAFT_10385912	3300000149	Marine	MARIGRKSTLEWIKEDYKNNPVRFCAEVIGMISNLTASMILMWYSPNPPMFIAY
ACM2_10831341	3300001834	Marine Plankton	MGRWVMKWIIEDYKSKPIRFITEVSGMIFNLMASLILMWYSPNPPMFWAYIFFLL
GOS2245_10745031	3300001966	Marine	MARVGRKTVLGWISQDYKSNPQRFLCEVVGMISNLIASIILMWYSPNPPMFYA
Ga0008649_103002301	3300005838	Marine	MARIGRKSTLKWIQEDYNSNPVRFCCEVIGMISNLIASLILMWYSPNPPMFIAYI
Ga0066378_102433193	3300005946	Marine	MARIGRKSTLAWIKEDFRSNPFRFYCEVIGMISNLIASLILMWYSPNPPMFIAYIFFLIATVFLMYGAWSRK
Ga0070754_102947353	3300006810	Aqueous	MARAGRKNVVNWIQEDYQSNKLRFIAEITGMTSNLMASLILMWYSPNPPMFW
Ga0075479_101373362	3300006870	Aqueous	MARIGRKKTLEWIKQDYKSNSVRFCCEVVGMVSNLIASIILMIYSPNPPMFWAY
Ga0101667_10448421	3300007116	Volcanic Co2 Seep Seawater	MARIGRKSTLEWIKEDYKSNPIRFCFELIGMISNLIASLILMWYSPNPPMFIAYIFFLIA
Ga0075460_100272381	3300007234	Aqueous	MARIGRKQALSWIAEDFQKNRKRFIIEIIGMCSNLMASLILMWFSPNPPMFWAYIFFLIA
Ga0099849_13458751	3300007539	Aqueous	MARIGRKQALSWIAEDFQKNRTRFVVEIIGMCSNLMASLILMWFSPNPPM
Ga0099850_12884352	3300007960	Aqueous	MARIGRRQTLNWIQKDYRKNPLRFCCEVVGMISNLVASIILMIYSPNPPMFWAYIFFILASILLLGAAYSRRSFG
Ga0115567_104824942	3300009508	Pelagic Marine	MARVGRKSTLQWIKEDYRSNPVRFCAEVIGMISNLIASLILMWYSPTPPMFMAY
Ga0115000_105652033	3300009705	Marine	MARVGRKSTLQWIKEDYRSNPVRFCAEVIGMISNLIASLILMWYSPTPPMF
Ga0115000_108446392	3300009705	Marine	MARVGRRKTLEWIKEDYISNPTRFCCEVVGMISNLIASLILMWYSPNPPMFIAYIFFL
Ga0115000_109490912	3300009705	Marine	MENRGAIEIMARVGRRKTLEWIKEDYTDNPVRFCAEVIGMISNLIASMILMWYSPNPPMFMAYI
Ga0132221_10086541	3300009911	Meromictic Pond	MARIGRKQALAWIAEDFQKNRTRFIIEIVGMCSNLIASLILMWFSPNPPMFWAYIFFLIASVLLL
Ga0129342_12153523	3300010299	Freshwater To Marine Saline Gradient	MARYNRRRVIMEWIQEDYKSHPVRFIAEIVGMISNLMASLILMWYSPNPPMFAAYI
Ga0163109_111907282	3300012936	Surface Seawater	MARIGRKSTLEWIKEDYRSNPIRFCCEVIGMISNLIASLILMWYSPNPPMF
Ga0163111_113459091	3300012954	Surface Seawater	MARIGRRKTIEWIKEDYTSNPFRFVCEVIGMISNLIASLILMWYSPNPPMFVAYIFFLVATCFLM
Ga0163111_122113312	3300012954	Surface Seawater	MARIGRKSTLEWIKEDYTSNPIRFCCEVIGMISNLIASLILMWYSPNPPMFIAYIFFLIATCFLMYGAWSRKSFG
Ga0163111_125093261	3300012954	Surface Seawater	MARIGRKRILQWIYEDYKSKPVRFVTEVSGMIFNLMAALILMWYSPNPPMFWAYIFFLLASVLLMSAAFSRKSFG
Ga0181369_10052855	3300017708	Marine	MARIGRRKTIEWIKEDYTSNPFRFVCEVIGMISNLIASLILMWYSPNPPMFVAYI
Ga0181369_11001032	3300017708	Marine	MARIGRKSTLEWIKEDYKSNPKRFCAEVVGMASNVIAALILMWYSPNPPMFIAYIFFLVATCFLMYGAFSRRSFGF
Ga0181369_11061572	3300017708	Marine	MARIGRKSTLEWIKEDYRSNPVRFCCEVIGMISNLIASLILMWYSPNP
Ga0181391_100144311	3300017713	Seawater	MARIGRKSTLEWIKEDYTSNPRRFCCEVIGMISNLIASLILMWYSPNPPMFIAYIFFLI
Ga0181390_10329324	3300017719	Seawater	MARIGRKSTLEWIKEDYTSNPKRFCAEVIGMASNVIAALILMWYSPNP
Ga0181373_10080695	3300017721	Marine	MARIGRKSTLQWIKEDYRSNPKRFCAEVIGMASNVIAALILMWYSPNPPMFIAYIFFLV
Ga0187222_10377853	3300017734	Seawater	MARIGRKSTLEWIKEDYTSNPKRFCAEVIGMASNVIAALILMWYSPNPPMFIAYIFFLVATCFLMYGAFSRRSFGF
Ga0181402_10080241	3300017743	Seawater	MARIGRKRVLQWIKEDYNTNPIRFTTEVSGMTLNLMAAIILMWYSPNPPMFWAYIFFILASGL
Ga0181402_11169411	3300017743	Seawater	MARIGRKSTLEWIKEDYTSNPRRFCCEVIGMISNLIASLILMWYSPNPPMFIAYIFFLIATVFLM
Ga0181407_10789653	3300017753	Seawater	MARIGRKSTLEWIKEDYSSNPKRFCAEVIGMASNVVAALILMWYSPNPPMFIAYIFFLVATCFLMYGAFSRR
Ga0181411_10215921	3300017755	Seawater	MARIGRKLTLEWIKKDYHSNPTRFCCEVIGMVSNLIASLILMWYSPNPPMFIAYIFFLVATCFLMY
Ga0181422_11977702	3300017762	Seawater	MARVGRKSTLEWIKEDYTSNPKRFCAEVIGMISNLIASLILMWYSPNPPMFIAY
Ga0181423_10878821	3300017781	Seawater	MARIGRKKVLKWIYEDYKSHPVRFTTEVSGMIFNLIAAIILMWYSPNPPMFWAYIF
Ga0181584_106908141	3300017949	Salt Marsh	MARIGRRQTLNWIKQDYRRNPLRFCCEVVGMISNLIASIILMIYSPNPPMFWAYIFFIL
Ga0181583_102342841	3300017952	Salt Marsh	MSRIGRRKVLGWIKEDFYLNPLRFICEVVGMISNLIASIILMIYSPNPPMFWAYIFFILASIL
Ga0181583_106606682	3300017952	Salt Marsh	MARIGRRQTLNWIKQDYRKNPLRFCCEVIGMISNLIASIILMIYSPNPPMFWAYIFFIL
Ga0181571_107643842	3300017957	Salt Marsh	MARVGRRKTIEWIKQDYKSNPFRFCCEVAGMISNVLAALILMWYSPNPPMFWAY
Ga0181582_101637723	3300017958	Salt Marsh	MARVGRKDTLSWIVKDYKTNPTRFIAEIIGMISNLIASLILMWYSPNPPMFWAYIFFLIASVLLMGAAFSRKSLGF
Ga0181582_105102933	3300017958	Salt Marsh	MARIGRRQTLNWIKQDYRKNPLRFCCEVIGMISNLIASIILMIYSPNPPMFWAYIFFILASILLLG
Ga0181581_107223311	3300017962	Salt Marsh	MARIGRRQTLNWIQQDYRKNPLRFCCEVIGMISNLIASIILMIYSPNPPMFW
Ga0181590_104989952	3300017967	Salt Marsh	MARVGRRKTLEWIKQDYKSNPLRFCCEVLGMISNLIASIILMIYSPNPPMFWAYIFFILASILLLGAAY
Ga0181587_110143392	3300017968	Salt Marsh	MARIGRRQTLNWIQQDYRKNPLRFCCEVIGMISNLIASIILMIYSPNPPMFWAY
Ga0181572_106769022	3300018049	Salt Marsh	MARIGRKSTLRWIKEDYRSNPVRFWCEVVGMISNLIASLILMWYSPNPPMFIAYIFFLVATCFLMYGAYS
Ga0181558_101672551	3300018417	Salt Marsh	MARIGRRKTLEWIRQDYQSNPFRFCCEVIGMLSNLVASLILMWYSPTPPMFLA
Ga0181592_103522771	3300018421	Salt Marsh	MARIGRKQALAWIAEDFQKNRTRFIVEIIGMCSNLMASLILMWFSPNPPM
Ga0181592_104518163	3300018421	Salt Marsh	MARIGRRQTLNWIKQDYRRNPLRFCCEVIGMISNLIASIILMIYSPNPPMFW
Ga0181591_100551981	3300018424	Salt Marsh	MSRIGRRKVLGWIKEDFYLNPLRFICEVVGMISNLIASIILMIYSPNPPMFWAYIFF
Ga0181591_102458303	3300018424	Salt Marsh	MARIGRRQTLNWIKQDYLRNPLRFCCEVVGMISNLIASIILMIYSPNPPMFWAYIFFIL
Ga0181591_106634221	3300018424	Salt Marsh	MARIGRRQTLNWIKQDYRKNPLRFCCEVVGMISNLIASIILMIYSPNPPMFWAYIFFILASILLLGAAY
Ga0181591_109947122	3300018424	Salt Marsh	MARIGRRQTLNWIQQDYRKNPLRFCCEVIGMISNLIASIILMIYSPNP
Ga0181578_103363512	3300020189	Salt Marsh	VSRIGRKDTLNWIKKDFRSNPKRFAYEVVGMVSNLIASLILMWYSPNPPM
Ga0211707_10182323	3300020246	Marine	MARIGRKSTLEWIKEDYKSNPLRFCCEVVGMLSNLVASLILMWYSPNPPMFIAYIFFL
Ga0211506_11656322	3300020365	Marine	MARIGRKAVLQWIYQDYKSHPVRFTTEVSGMIFNLIAAIILMWYSPNPPMFWAYIFFLLASGLL
Ga0211675_100165717	3300020391	Marine	MARIGRKSTLEWIKKDYKSNPVRFYCEVVGMLSNLIASLILMWYSPNPPMFIAYIFFLVA
Ga0211666_102333713	3300020392	Marine	MARIGRKRVLQWIKEDYNTNPIRFTTEVSGMTLNLMAAIILMWYSPNPPMFWAYIFFILASGLLMVAAFSR
Ga0211699_103635772	3300020410	Marine	MARIGRKSTLEWIQEDYNSNPIRFCCEVIGMFSNLIASLILMWYSPNPPMFIAYIFFLVA
Ga0211516_100199641	3300020413	Marine	MARIGRKSTIQWIKEDYKSNPFRFCCEVIGMISNLIASLILMWYSPNPPMFIAYIFF
Ga0211580_101620602	3300020420	Marine	MARIGRKSTLEWIREDYNSNPLRFCCEVIGMVSNLIASLILMWYSPTPPMFIAYIFFLIATVFLM
Ga0211521_102680681	3300020428	Marine	MARVGRRKTLEWIKEDYRSNPIRFYCEVVGMISNLIASLILMWYSPNPPMF
Ga0211539_100031801	3300020437	Marine	MARIGRKRILQWIYEDYKSKPIRFVTEVSGMIFNLMAALILMWYSPNPPMFWAYIFFLLASVLLMSAAFS
Ga0211539_100279351	3300020437	Marine	MARIGRKKILKWIIEDYKSKPIRFITEVSGMIFNLMASLILMWYSPNPPMFWAYIFFLLASVLLMSAAFS
Ga0211473_101679472	3300020451	Marine	MARIGRRKTIEWIKEDYKSNPFRFVCEVIGMISNLIASLILMWYSPNPPMFVAYIFF
Ga0211486_100651384	3300020460	Marine	MEKGDTITVMARIGRKTTLQWIKEDFKSNPKRFCYEVIGMLSNLIASLILMWYSPNPPMFVAYIFFLIATCFLMYGAWSRRS
Ga0211535_100980781	3300020461	Marine	MARVGRKSTLEWIKKDYHSNPTRFCCEVIGMVSNLIASLILMWYSPNPPMFIA
Ga0211577_105546681	3300020469	Marine	MARIGRKSTLEWIKEDYRSNPMRFCCEVVGMASNVIAALILMWYSPNPP
Ga0211579_106521701	3300020472	Marine	MARIGRKSTLKWIREDYNSNPFRFCCEVIGMISNLIASLILMWYSPNPPMFI
Ga0213858_106014652	3300021356	Seawater	MARAGRKQVLNWIKQDYKTNPMRFISECCGMVSNLIASLILMWFSPNPPMFWAYIFFILASILLLGSALSRKSF
Ga0222716_104678103	3300021959	Estuarine Water	MARIGRRQTLNWIKQDYRRNPLRFCCEVVGMISNLIASIILMMYSPNPPMFWAY
Ga0222715_103474932	3300021960	Estuarine Water	MARVGRRKTLEWIKQDYKSNPFRFCCEVLGMVCNVIAALILMWYSPN
Ga0222653_10433532	3300022857	Saline Water	MENRGAIEIMARVGRRKTLEWIKEDYTDNPIRFCAEVIGMISNLIASMILMWYSPNPPMFMAYIFFLVATVFLIYGAWS
Ga0255780_100886871	3300022935	Salt Marsh	MSRIGRRKVLGWIKEDFYLNPLRFICEVVGMISNLIASIILMIYSPNPPMFWAYIFFILASVLLLGAAYS
Ga0255780_103451683	3300022935	Salt Marsh	MARIGRRQTLNWIKQDYRKNPLRFCCEVIGMISNLIASIILMIYSPNPPMFWAYIFFILASILLLGAA
Ga0255770_104216992	3300022937	Salt Marsh	MARIGRRQTLNWIKQDYRRNPLRFCCEVVGMISNLIASIILMIYSPNPPMFWAYIFFILASILLLG
Ga0255764_100354011	3300023081	Salt Marsh	MARIGRKSTLQWIKEDYRSNPVRFWCEVVGMISNLIASLILMWYSPNPPMFIAYIFFL
Ga0255764_103819961	3300023081	Salt Marsh	MARIGRRQTLNWIQKDYRKNPLRFCCEVVGMISNLIASIILMIYSPNPPMFWAYIFFILASILLLGAAYSRRSFGF
Ga0255760_103151821	3300023115	Salt Marsh	MARAGRKNVVNWIQEDYQSNKLRFIAEITGMTSNLMASLILMWYSPNPPMFWAYVFFLIATI
Ga0255751_102144143	3300023116	Salt Marsh	MARIGRRQTLNWIKQDYRRNPLRFCCEVIGMISNLIASIILMIYSPNPPMFWAYIFFILASILLLGAAYSRRSFG
Ga0255772_105027712	3300023176	Salt Marsh	MARVGRKDTLSWIVKDYKTNPTRFIAEIIGMISNLIASLILMWYSPNPPMFWAYIFFLIASVL
Ga0255768_101204771	3300023180	Salt Marsh	MARIGRRQTLNWIKQDYRKNPLRFCCEVIGMISNLIASIILMIYSPNPPM
Ga0222689_10423951	3300023231	Saline Water	MENRGAIEIMARVGRRKTLEWIKEDYTDNPIRFCAEVIGMISNLIASMILMWYSPNPP
Ga0222650_10492512	3300023237	Saline Water	MENRGAIEIMARVGRRKTLEWIKEDYTDNPIRFCAEVIGMISNLIASMILMWYSPNPPMFMAYIFFLVAT
Ga0228686_10294711	3300023685	Seawater	MARIGRKRVLQWIKEDYNTNPVRFTTEVSGMTLNLMAAIILMWYSPNPPMFWAYIFFILA
Ga0228680_10029451	3300023695	Seawater	MARIGRKRVLQWIKEDYNTNPVRFTTEVSGMTLNLMAAIILMWYSPNPPMFWAYIFFILASG
Ga0228695_10051937	3300023699	Seawater	MARIGRKRVLQWIKEDYNTNPVRFTTEVSGMTLNLMAAIILMWYSPNPPMFWAYIFFIL
Ga0228667_10720021	3300024226	Seawater	MARIGRKRVLQWIKEDYNTNPVRFTTEVSGMTLNLMAAIILMWYSPNPPMFWAY
Ga0228632_11134371	3300024420	Seawater	MARIGRKKVLKWIYEDYKSHPVRFTTEVSGMIFNLIAAIILMWYSPNPPMFWAYIFFLLASGLLMTAAFSRKS
Ga0209535_11547262	3300025120	Marine	VEDRGAVEIMARVGRRKTLEWIKEDYRSNPKRFCCEVVGMASNVMAA
Ga0208161_11635722	3300025646	Aqueous	MARIGRKQALSWIAEDFQKNRIRFIIEIVGMCSNLMASLILMWYSPNPPMF
Ga0208428_11264871	3300025653	Aqueous	MARIGRRQTLNWIQQDYRKNPLRFCCEVIGMISNLIASIILMIYSPNPPMFWAYIFFILASILLLGAAYSRRSFG
Ga0208795_11830681	3300025655	Aqueous	MARIGRKQALSWIAEDFQKNRKRFIIEIVGMCSNLMAALILMWYSPNPPMFWAYIFFLIASALLLW
Ga0208019_10486433	3300025687	Aqueous	MARIGRKQALAWIAEDFQKNRVRFIVEIIGMCSNLMAALILMWYSPNPPMFWAYIFFLIASALLLWAAYS
Ga0209771_11795451	3300025701	Marine	MENRGAIEIMARVGRRKTLEWIKEDYTYNPVRFCAEVIGMIANLIASMILMWYSPNPPMFMAYIFFLIAT
Ga0208150_12108662	3300025751	Aqueous	MARIGRRQTLNWIQQDYRKNPLRFCCEVIGMISNLIASIILMIYSPNPPMFWAYIF
Ga0208427_11564793	3300025771	Aqueous	MARIGRRQTLNWIQQDYRKNPLRFCCEVIGMISNLIASIILMIYSPNPPMFWAYIFFILASILLL
Ga0208644_13751771	3300025889	Aqueous	MARVGRRQTLNWIKQDYRKNPLRFCCEVVGMISNLIASIILMIYSPNPPMFWAYIFFI
Ga0247568_10099651	3300026462	Seawater	MARIGRKRVLQWIKEDYNTNPVRFTTEVSGMTLNLMAAIILMWYSPNPPMFWAYIFFILASGLLMV
Ga0247599_10047208	3300026470	Seawater	MARIGRKRVLQWIKEDYNTNPVRFTTEVSGMTLNLMAAIILMWYSPNPPMFWPYIFFILASG
Ga0209830_101186483	3300027791	Marine	MARVGRRKTLEWIKEDYISNPTRFCCEVVGMISNLIASLILMWYSPNPPMFIAYIFFLFATFFLMYGAFS
Ga0209830_104188891	3300027791	Marine	MARVGRKSTLQWIKEDYRSNPVRFCAEVIGMISNLIASLILMWYSPTP
Ga0247595_10366273	3300028333	Seawater	MARIGRKRVLQWIKEDYNTNPVRFTTEVSGMTLNLMAAIILMWYSPNPPMFWAYIFFILASGLLMVAAFSRKSFGF
Ga0183755_10902073	3300029448	Marine	MARIGRKSTLQWIQEDYRSNPKRFCCEVIGMVSNLIASLILMWYSPN
Ga0302131_10413704	3300031594	Marine	MARVGRRKTLEWIKEDYRSNPKRFCCEVVGMISNLIASLILMWYSPNPPMFIAYIF
Ga0302116_11213231	3300031597	Marine	MARVGRKSTLQWIKEDYRSNPVRFCAEVIGMISNLIASLILMWYSPTPPMFMAYIFFLIA
Ga0307999_10340461	3300031608	Marine	MARIGRKSTLEWIKEDYTSNPRRFCCEVIGMISNLIASLILMWYSPNPPMFIAYIFFLIATVFLIY
Ga0315316_115234022	3300032011	Seawater	MARIGRKSTLEWIKEDYNSNPTRFCAEVIGMISNLIASLILMWYSPNPPMFIAYIFFLI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093472

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences