Metagenome / Metatranscriptome Family F093458

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F093458
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	136 residues
Representative Sequence	VTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVAPGAPTRPELRTARSG
Number of Associated Samples	89
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.49 %
% of genes near scaffold ends (potentially truncated)	48.11 %
% of genes from short scaffolds (< 2000 bps)	72.64 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.038 % of family members)
Environment Ontology (ENVO)	Unclassified (34.906 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.113 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (beta-barrel)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.89% β-sheet: 14.29% Coil/Unstructured: 27.82%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00296	Bac_luciferase	20.75
PF07746	LigA	11.32
PF06441	EHN	7.55
PF12172	DUF35_N	4.72
PF02900	LigB	3.77
PF04199	Cyclase	2.83
PF01796	OB_aCoA_assoc	1.89
PF13480	Acetyltransf_6	1.89
PF00486	Trans_reg_C	0.94
PF00583	Acetyltransf_1	0.94
PF00378	ECH_1	0.94
PF13751	DDE_Tnp_1_6	0.94
PF13263	PHP_C	0.94
PF13242	Hydrolase_like	0.94
PF02348	CTP_transf_3	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	20.75
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	7.55
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	2.83
COG1545	Uncharacterized OB-fold protein, contains Zn-ribbon domain	General function prediction only [R]	1.89
COG1083	CMP-N-acetylneuraminic acid synthetase, NeuA/PseF family	Cell wall/membrane/envelope biogenesis [M]	0.94
COG1212	CMP-2-keto-3-deoxyoctulosonic acid synthetase	Cell wall/membrane/envelope biogenesis [M]	0.94
COG1861	Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase family	Cell wall/membrane/envelope biogenesis [M]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	67.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.77 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	67.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.77 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	67.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.77 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	57.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.83 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	57.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.83 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	0.94 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100760474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1932	Open in IMG/M
3300004267\|Ga0066396_10009431	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1139	Open in IMG/M
3300004281\|Ga0066397_10175748	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300004633\|Ga0066395_10019288	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2684	Open in IMG/M
3300005177\|Ga0066690_10216184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1279	Open in IMG/M
3300005180\|Ga0066685_10041225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2928	Open in IMG/M
3300005186\|Ga0066676_10460085	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	862	Open in IMG/M
3300005332\|Ga0066388_100060056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4017	Open in IMG/M
3300005332\|Ga0066388_101907837	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1061	Open in IMG/M
3300005332\|Ga0066388_105769255	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	626	Open in IMG/M
3300005568\|Ga0066703_10332493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	915	Open in IMG/M
3300005713\|Ga0066905_100402157	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1111	Open in IMG/M
3300005713\|Ga0066905_100840988	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	799	Open in IMG/M
3300005764\|Ga0066903_100230207	All Organisms → cellular organisms → Bacteria → Proteobacteria	2825	Open in IMG/M
3300005764\|Ga0066903_100393976	All Organisms → cellular organisms → Bacteria	2273	Open in IMG/M
3300005764\|Ga0066903_102760595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	953	Open in IMG/M
3300006049\|Ga0075417_10151739	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1078	Open in IMG/M
3300006058\|Ga0075432_10190694	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	806	Open in IMG/M
3300006844\|Ga0075428_101070102	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	852	Open in IMG/M
3300006854\|Ga0075425_100309927	All Organisms → cellular organisms → Bacteria	1817	Open in IMG/M
3300006871\|Ga0075434_101354037	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	722	Open in IMG/M
3300006969\|Ga0075419_10002828	All Organisms → cellular organisms → Bacteria → Proteobacteria	11122	Open in IMG/M
3300009094\|Ga0111539_13047374	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	541	Open in IMG/M
3300009137\|Ga0066709_100132832	All Organisms → cellular organisms → Bacteria	3141	Open in IMG/M
3300009162\|Ga0075423_10229481	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1945	Open in IMG/M
3300009162\|Ga0075423_10483684	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1302	Open in IMG/M
3300009792\|Ga0126374_10478913	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	892	Open in IMG/M
3300010046\|Ga0126384_11413933	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	649	Open in IMG/M
3300010047\|Ga0126382_10095884	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1901	Open in IMG/M
3300010047\|Ga0126382_10553664	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	937	Open in IMG/M
3300010303\|Ga0134082_10173502	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	877	Open in IMG/M
3300010304\|Ga0134088_10000025	All Organisms → cellular organisms → Bacteria	32626	Open in IMG/M
3300010336\|Ga0134071_10138984	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1176	Open in IMG/M
3300010358\|Ga0126370_10276316	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1318	Open in IMG/M
3300010358\|Ga0126370_10572759	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	969	Open in IMG/M
3300010359\|Ga0126376_10879522	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	884	Open in IMG/M
3300010360\|Ga0126372_10008946	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	5192	Open in IMG/M
3300010362\|Ga0126377_10174246	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2041	Open in IMG/M
3300010362\|Ga0126377_10521202	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1223	Open in IMG/M
3300010362\|Ga0126377_10650545	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1103	Open in IMG/M
3300010366\|Ga0126379_10315610	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300010376\|Ga0126381_102194448	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	794	Open in IMG/M
3300010398\|Ga0126383_10145154	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2204	Open in IMG/M
3300012203\|Ga0137399_10504928	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1014	Open in IMG/M
3300012205\|Ga0137362_11668826	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300012393\|Ga0134052_1038538	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	573	Open in IMG/M
3300012396\|Ga0134057_1321842	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	589	Open in IMG/M
3300012582\|Ga0137358_10086678	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2112	Open in IMG/M
3300012685\|Ga0137397_10398228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1025	Open in IMG/M
3300012922\|Ga0137394_10119472	All Organisms → cellular organisms → Bacteria	2230	Open in IMG/M
3300012922\|Ga0137394_10202400	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1696	Open in IMG/M
3300012929\|Ga0137404_10103638	All Organisms → cellular organisms → Bacteria	2300	Open in IMG/M
3300012930\|Ga0137407_10219819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1712	Open in IMG/M
3300012944\|Ga0137410_10211853	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1505	Open in IMG/M
3300012948\|Ga0126375_10012268	All Organisms → cellular organisms → Bacteria → Proteobacteria	3685	Open in IMG/M
3300012948\|Ga0126375_10671724	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	802	Open in IMG/M
3300012972\|Ga0134077_10005655	All Organisms → cellular organisms → Bacteria → Proteobacteria	3856	Open in IMG/M
3300015371\|Ga0132258_10001827	All Organisms → cellular organisms → Bacteria	38433	Open in IMG/M
3300015372\|Ga0132256_100029243	All Organisms → cellular organisms → Bacteria	4973	Open in IMG/M
3300016371\|Ga0182034_10423982	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1096	Open in IMG/M
3300016387\|Ga0182040_10690156	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	834	Open in IMG/M
3300018431\|Ga0066655_10467278	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	833	Open in IMG/M
3300025961\|Ga0207712_11748343	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	557	Open in IMG/M
3300026310\|Ga0209239_1018307	All Organisms → cellular organisms → Bacteria	3522	Open in IMG/M
3300026324\|Ga0209470_1000131	All Organisms → cellular organisms → Bacteria	55088	Open in IMG/M
3300026324\|Ga0209470_1153878	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1008	Open in IMG/M
3300026335\|Ga0209804_1295644	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	554	Open in IMG/M
3300026548\|Ga0209161_10380403	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	624	Open in IMG/M
3300027646\|Ga0209466_1060212	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	766	Open in IMG/M
3300027873\|Ga0209814_10057801	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1623	Open in IMG/M
3300027874\|Ga0209465_10063913	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1776	Open in IMG/M
3300027880\|Ga0209481_10000307	All Organisms → cellular organisms → Bacteria	20306	Open in IMG/M
3300027907\|Ga0207428_10000138	All Organisms → cellular organisms → Bacteria	98359	Open in IMG/M
3300031538\|Ga0310888_10027190	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2479	Open in IMG/M
3300031543\|Ga0318516_10533224	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	672	Open in IMG/M
3300031544\|Ga0318534_10143954	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300031545\|Ga0318541_10102820	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300031547\|Ga0310887_10149032	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1224	Open in IMG/M
3300031572\|Ga0318515_10060874	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1921	Open in IMG/M
3300031640\|Ga0318555_10045346	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2210	Open in IMG/M
3300031720\|Ga0307469_10025278	All Organisms → cellular organisms → Bacteria	3327	Open in IMG/M
3300031720\|Ga0307469_11491504	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	647	Open in IMG/M
3300031740\|Ga0307468_100296841	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1170	Open in IMG/M
3300031744\|Ga0306918_11029446	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	639	Open in IMG/M
3300031748\|Ga0318492_10151376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1170	Open in IMG/M
3300031764\|Ga0318535_10165489	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	987	Open in IMG/M
3300031778\|Ga0318498_10147220	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1071	Open in IMG/M
3300031833\|Ga0310917_10508082	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	820	Open in IMG/M
3300031854\|Ga0310904_10620299	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	740	Open in IMG/M
3300031879\|Ga0306919_10033358	All Organisms → cellular organisms → Bacteria	3270	Open in IMG/M
3300031893\|Ga0318536_10142151	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300031894\|Ga0318522_10387589	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300031913\|Ga0310891_10029830	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1426	Open in IMG/M
3300031942\|Ga0310916_10145854	All Organisms → cellular organisms → Bacteria	1949	Open in IMG/M
3300032000\|Ga0310903_10495182	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	637	Open in IMG/M
3300032009\|Ga0318563_10723814	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	534	Open in IMG/M
3300032010\|Ga0318569_10174689	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	993	Open in IMG/M
3300032043\|Ga0318556_10013775	All Organisms → cellular organisms → Bacteria	3470	Open in IMG/M
3300032067\|Ga0318524_10602546	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	578	Open in IMG/M
3300032075\|Ga0310890_10012483	All Organisms → cellular organisms → Bacteria	4091	Open in IMG/M
3300032091\|Ga0318577_10193089	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	973	Open in IMG/M
3300032180\|Ga0307471_100159340	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2187	Open in IMG/M
3300032180\|Ga0307471_100938653	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1032	Open in IMG/M
3300032180\|Ga0307471_102472236	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	657	Open in IMG/M
3300032205\|Ga0307472_101316599	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	696	Open in IMG/M
3300032205\|Ga0307472_101732812	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	618	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.85%
Host-Associated	Host-Associated	14.15%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.85%
Plants	Host-Associated → Plants	14.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.58%
Loam	Environmental → Terrestrial → Soil → Loam	12.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.32%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.32%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.49%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.94%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1007604742	3300000956	Soil	MLVTSRLDEPVALVLILATGLLLILALVGKVSALRLRRDGEAVAVRGLIVDALGRDPELYAWPLTAMVRVPLWVGSPVTVRVIGEVPSKELKRAALLRVKNAAKAELSVRVRIKSRIGVTPSAATRAPLRTARSG*
Ga0066396_100094312	3300004267	Tropical Forest Soil	VTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVMGEVPSKELKRTALQRVKYTAKAELAVRVRVRSRIGVAPGAPTRPELRTARSG*
Ga0066397_101757481	3300004281	Tropical Forest Soil	ELASLDGQEAPLVTSRLDEPVTLILILAVGFLLILVLVGKVSALRIRRDGEAVAVRGLIVDALGRDPELYVWPLTAIVRVPLWIGSPVTIRVIGEVPSKEIKQAALLRVKHAAKAELCVRVRIKSRIGVTPSAARAPLRPVRWG*
Ga0066395_100192884	3300004633	Tropical Forest Soil	VTSRLDEPVALVLILATGFLLMLAFVGKVSSLRIRRDGEAVAVRGLVVDALGRDPELYVWPLTAIVRVPLWIGSPVTIRVIGEVPSKEIKQAALLRVKHAAKAELCVRVRIKSRIGVTPSAARAPLRPVRWG*
Ga0066690_102161842	3300005177	Soil	VTSRLDEPIALVLILAAGLLLVLALAGKVSALRLKRDGEAVAVRGLIVDALGHDPDLLAWPLTAMVRVPLWSGSPVTIRVIGEVPSKELKRAALRRVKQTAIAKLSVRVRIKSRIGVAPRAATRAELRTARSG*
Ga0066685_100412252	3300005180	Soil	VASRLDDPIALVLLLAAGLLLVLALVGKVSALRLKRDGEAVAVRGMVVDALGHDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRAALLRVKHTAAAELSVRVRIKSRIGVAPRAAARPELRTARSG*
Ga0066676_104600852	3300005186	Soil	VTSRLDEPIALVLILAAGLLLVLALVGKVSALRLKRDGEAVAVKGLIVDALGHDAELLAWPLSATVRVPLWRGSPVTIRVIGEVPSKDLRLVALRRVKHTAIAELSVRVRIKSRIRVAPNAPTRPALRTARSG*
Ga0066388_1000600564	3300005332	Tropical Forest Soil	MAPGLPHLDGQEALLVTSRLDEPVALVLILATGLLLVLALVGKVSALRLKRDGEAVAVRGLIVDALGRDPELYAWPLTPMVRVPLWIGSPVTIRVIGEVPSKELKRAVILRVKHAAKMELSVRVRVKSRIGVTPSAVRVPLRTVRSG*
Ga0066388_1019078372	3300005332	Tropical Forest Soil	VTLRLDEPIVLVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALGRDRELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRAALQRVKHTAKVELAVRVRVRSRIGVAPGAAPRPPLDAASNIPVRSRG*
Ga0066388_1057692551	3300005332	Tropical Forest Soil	VSSNLPLEGPVALVLALAVGLLLTLALVGKLSALRLKRDGEAVAVKGLIADALDRDPELFGLPLSAAVRVPLFRGKPVIIRISGEVPSDELKRIALRRVQHTAKAELLVRVRIRSRIGVAPAATLLRRARSG*
Ga0066703_103324932	3300005568	Soil	VTSRLDEPISLVLILAAGLLLVLALAGKVSALRLKRDGEAVAVRGLIVDALGHDPDLLAWPLTAMVRVPLWSGSPVTIRVIGEVPSKELKRAALRRVKQTAIAKLSVRVRIKSRIGVAPRAATRAELRTARSG*
Ga0066905_1004021571	3300005713	Tropical Forest Soil	VTSRLDEPVTLILILAVGFLLILVLVGKVSALRIRRDGEAVAVRGLIVDALGRDPELYVWPLTAIVRVPLWIGSPVTIRVIGEVPSKEIKQAALLRVKHAAKAELCVRVRIKSRIGVT
Ga0066905_1008409882	3300005713	Tropical Forest Soil	VVTSRLDDPITHVLLLAVGLLLVLALVGKISSLRLRRDGEAVAVRGLIVDALGRDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRAALQRVKHTAKAELAVRVRVRSKIGVAPGAAPRPELRTARSG*
Ga0066903_1002302076	3300005764	Tropical Forest Soil	VTSRLDEPVALVLILATGFLLMLAFVGKVSSLRIRRDGEAVAVRGLVVDALGRDPELYVWPLTAIVRVPLWIGSPVTIRVIGEVPSKEIKRAALLRVKHAAKAELCVRVRIKSRIGVTPSAARAPLRPVRWG*
Ga0066903_1003939763	3300005764	Tropical Forest Soil	VTSRLDEPTALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPALLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALERVKHTAKAELAVRVWVRSRIGVAPGAPPRPELRTARSG*
Ga0066903_1027605952	3300005764	Tropical Forest Soil	VTVRLDEPIAVVLLLAVGLLLTLALVGKVSALRLRRDGEAVAVRGLIIDSLARDPELVAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRAAVQRVKHTAKAELAVRVRVRS
Ga0075417_101517392	3300006049	Populus Rhizosphere	VSLSTPLEGPITLVLALAVGLLLLLALIGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGIAPAATLLRRARSR*
Ga0075432_101906941	3300006058	Populus Rhizosphere	VSLSTPLEGPITLVLALAVGLLLMLALVGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGVAPAATLLGRARSR*
Ga0075428_1010701022	3300006844	Populus Rhizosphere	EATHVSLSTPLEGPITLVLALAVGLLLMLALVGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGVAPAATLLGRARSR*
Ga0075425_1003099271	3300006854	Populus Rhizosphere	MLVTSRLDEPVALVLILATGLLLILALVGKVSALRLRRDGEAVAVRGLIVDALGRDPELYAWPLTAMVRVPLWIGSPVTIRVIGEVPSKELKRAALLRVKNAAKAELSVRVRIKSRIGVTPNAATRAPLRTAR
Ga0075434_1013540372	3300006871	Populus Rhizosphere	MLVTSRLDEPVALVLILATGLLLILALVGKVSALRLRRDGEAVAVRGLIVDALGRDPELYAWPLTAMVRVPLWIGSPVTIRVIGEVPSKELKRAALLRVKNAAKAELSVRVRIK
Ga0075419_1000282812	3300006969	Populus Rhizosphere	VSLSTPLEGPITLVLALAVGLLLLLALIGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGIAPATTLLRRARSR*
Ga0111539_130473741	3300009094	Populus Rhizosphere	LALAVGLLLLLALIGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGIAPAATLLRRARSR*
Ga0066709_1001328324	3300009137	Grasslands Soil	VASGLPHLDGEEATLVASRLDDPIALVLLLAAGLLLVLALVGKVSALRLKRDGEAVAVRGMVVDALGHDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRAALLRVKHTAAAELSVRVRIKSRIGVAPRAAARPELRTARSG*
Ga0075423_102294811	3300009162	Populus Rhizosphere	VSLSTPLEGPITLVLALAVGLLLMLALIGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGIAPAATLLRRARSH*
Ga0075423_104836842	3300009162	Populus Rhizosphere	VTSRLDEPIALVLILAAGLLLVLALVGKVSALRLKRDGEAVAVKGLIVDALGHDPQLLAWPLSTTVRVPLWRGSPVTIRVIGEVPSKDLRMAALRRVKHTATAELSVRVRIRSRIGVAPNAPTRPALRTARWG*
Ga0126374_104789131	3300009792	Tropical Forest Soil	SRLRNKLGDDGGPDGLIKTVRNDGYIFVGKVSALRLKRDGEAVAVRGLIVDALGRDPELYAWPLTPMVRVPLWIGSPVTIRVIGEVPSKELKRAVILRVKHAAKMELSVRVRVKSRIGVTPSAVRVPLRTVRSG*
Ga0126384_114139332	3300010046	Tropical Forest Soil	VPRRPRSPRHLPLAPAFFAGGIELASLEPPGGDDVVTSRLDDPITLVLLLAVGLLLVLALVGKISSLRLRRDGEAVAVRGLIVDALGRDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRAALQRVKHTAKAELAVRVRVRSKIGVAPGAAPRPELRTARSG*
Ga0126382_100958842	3300010047	Tropical Forest Soil	LPHLDGEEAPLVTSRLDEPVALVLILATGFLLMLAFVGKVSSLRIRRDGEAVAVRGLVVDALGRDPELYVWPLTAIVRVPLWIGSPVTIRVIGEVPSKEIKQAALLRVKHAAKAELCVRVRIKSRIGVTPSAARAPLRPVRWG*
Ga0126382_105536642	3300010047	Tropical Forest Soil	VLTSRLDDPITLVLLLAVGLLLVLALVGKISSLRLRRDGEAVAVRGLIVDALGRDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRAALQRVKHTAKAELAVRVRVRSKIGVAPGAAPRPELRTARSG*
Ga0134082_101735022	3300010303	Grasslands Soil	RPGRRHERAPSFIPCSPRRFSEVASRLPRLDGQEAALVTSRLDEPIALVLILAAGLLLVLALAGKVSALRLKRDGEAVAVRGLIVDALGHDPDLLAWPLTAMVRVPLWSGSPVTIRVIGEVPSKELKRAALRRVKQTAIAKLSVRVRIKSRIGVAPRAATRAELRTARSG*
Ga0134088_100000254	3300010304	Grasslands Soil	VASGLPHLDGEEATLVASRLDDPIALVLLLAAGLLLVLALVGKVSALRLKSDGEAVAVRGMVVDALGHDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRAALLRVKHTAAAELSVRVRIKSRIGVAPRAAARPELRTARSG*
Ga0134071_101389843	3300010336	Grasslands Soil	VTSRLDEPIALVLILAAGLLLVLALVGKVSALRLKRDGEAVAVKGLIVDALGHDPELLAWPLSATVRVPLWRGSPVTIRVIGEVPSKDLRLVALRRVKHTAIAELSVRVRIKSRIRVAPNAP
Ga0126370_102763162	3300010358	Tropical Forest Soil	LPHLDGEEAPLVTSRLDEPVALVLILATGFLLMLAFVGKVSSLRIRRDGEAVAVRGLVVDALGRDPELYVWPLTAIVRVPLWIGSPVTIGVIGEVPSKEIKQAALLRVKHAAKAELCVRVRIKSRIGVTPSAARAPLRPVRWG*
Ga0126370_105727592	3300010358	Tropical Forest Soil	VASGLLCWSRQEATLVTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARGPELLAWPLTATVRVPLWIGSPVTIRVMGEVPSKELKRTALQRVKYTAKAELAVRVRVRSRIGVAPGAPTRPELRTARSG*
Ga0126376_108795222	3300010359	Tropical Forest Soil	VTSRLDEPVTLILILAVGFLLILVLVGKVSALRIRRDGEAVAVRGLIVDALGRDPELYVWPLTAIVRVPLWIGSPVTIRVIGEVPSKEIKQAALLRVKHAAKAELCVRVRIKSRIGVTPSAARAPLRPVRWG*
Ga0126372_100089464	3300010360	Tropical Forest Soil	VFLPVASSLPCWSRQEATLVTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVMGEVPSKELKRTALQRVKYTAKAELAVRVRVRSRIGVAPGAPTRPELRTARSG*
Ga0126377_101742462	3300010362	Tropical Forest Soil	VTSRLDEPVTLILILAVGFLLILVLVGKVSALRIRRDGEAVAVRGLIVDALGRDPELYVWPLTAIVRVPLWIGSPVTIRVIGEVPSKEIKQAALLRVKHAAKAELCVRVRIKSRIGVTRSAPRAPFRTVRWG*
Ga0126377_105212021	3300010362	Tropical Forest Soil	LPHAGRDGARHVPLAAAFSAVAPSLPHLDGEEAMLVTSRLDEPVALVLILATGLLVILALVGKVSALRLRRDGEAVAVRGLIVDALGRDPELYAWPLTAMVRVPLWIGSPVTIRVIGELPSKELKRAALLRVKNAAKAELSVRVRIKSRIGVTPSAATRAELRTARSG*
Ga0126377_106505452	3300010362	Tropical Forest Soil	VFFAGGIELALLEPQEATLVTSRLDEPTALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPALLAWPLTATVRVPLWIGSPVTIRVMGEVPSKELKRTALQRVKHTAKAELAVRVWVRSRIGVAPGAPPRPELRTARSG*
Ga0126379_103156101	3300010366	Tropical Forest Soil	AMLVTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVAPGAPTRPELRTARSG*
Ga0126381_1021944481	3300010376	Tropical Forest Soil	VASSLPCWSRQEATLVTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVR
Ga0126383_101451543	3300010398	Tropical Forest Soil	VASSLPCWSRQEATLVTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVMGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVAPGAPTRPELRTARSG*
Ga0137399_105049281	3300012203	Vadose Zone Soil	VVASSLPPLDGEEAPHVTSRLDEPVALVLIVAASLLLVLALAGKVSALRLRRDGEAVAVKGLIVDALGHDPELLAWPLTATVRVPLWSGSPVTIRVIGEVPSKELKRAVLSRVKHTATAELSVRVRIKSRIGVAPSAATRSELRTAR
Ga0137362_116688262	3300012205	Vadose Zone Soil	RLDEPVALVLIVAASLLLVLALAGKVSALRLRRDGEAVAVKGLIVDALGHDPELLAWPLTATVRVPLWSGSPVTIRVIGEVPSKELKRAVLSRVKHTATAELSVRVRIKSRIGVAPSAATRSELRTARSG*
Ga0134052_10385381	3300012393	Grasslands Soil	TLVASRLDDPIALVLLLAAGLLLVLALVGKVSALRLKRDGEAVAVRGMVVDALGHDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRAALLRVKHTAAAELSVRVRIKSRIGVAPRAAARPELRTARSG*
Ga0134057_13218421	3300012396	Grasslands Soil	GLLLVLALVGKVSALRLKSDGEAVAVRGMVVDALGHDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRAALLRVKHTAAAELSVRVRIKSRIGVAPRAAARPELRTARSG*
Ga0137358_100866782	3300012582	Vadose Zone Soil	VVASSLPPLDGEEAPHVTSRLDEPVALVLIVAASLLLVLALAGKVSALRLRRDGEAVAVKGLIVDALGHDPELLAWPLTATVRVPLWSGSPVTIRVIGEVPSKELKRAVLSRVKHTATAELSVRVRIKSRTGEPVVC*
Ga0137397_103982282	3300012685	Vadose Zone Soil	VTSRLDEPIALVLILAAGLLLVLALVGKVSALRLKRDGEAVAVKGLIVDALGHDPQLLAWPLSATVRVPLWRGSPVTIRVIGEVPSKDLRLVALRRVKHTAIAELSVRVRIKSRIGVAPNAPTRPALRTARSG*
Ga0137394_101194723	3300012922	Vadose Zone Soil	VTSRLDEPIALVLILAAGLLLVLALVGKVSALRLKRDGEAVAVKGLIVDALGHDPQLLAWPLSATVRVPLWRGSPVTIRVIGEVPSKDLRMAALRRVKHTATAELSVRVRIRSRIGVAPNAPTRPALRTARSG*
Ga0137394_102024001	3300012922	Vadose Zone Soil	ARRRRRVTSRLEEPIALVLILAAGLLLVLALVGKVSALRLKRDGEAVAVKGLIVDALGHDPQLLAWPLSATVRVPLWRGSPVTIRVIGEVPSKDLRLVALRRVKHTAIAELSVRVRIKSRIGVAPNAPTRPALRTARSG*
Ga0137404_101036384	3300012929	Vadose Zone Soil	VTSRLDEPIALVLILAAGLLLVLALVGKVSALRLKRDGEAVAVKGLIVDALGHDPQLLAWPLSATVRVPLWRGSPVTIRVIGEVPSKDLRLAALRRVKHTATAALSVRVRIRSRIAVAPNAPTR
Ga0137407_102198193	3300012930	Vadose Zone Soil	VTSRLDEPIALVLILAAGLLLVLALVGKVSALRLKRDGEAVAVKGLIVDALGHDPQLLAWPLSATVRVPLWRGSPVTIRVIGEVPSKDLRLAALRRVKHTATAELSVRVRIRSRTGLAPNAPTRALRTARS
Ga0137410_102118534	3300012944	Vadose Zone Soil	VTSRLDEPIALVLILAAGLLLVLALVGKVSALRLKRDGEAVAVKGLIVDALGHDPQLLAWPLSATVRVPLWRGSPVTIRVIGEVPSKDLRLAALRRVKHTATAELSVRVRIRSRIGVAPNAPTRPALRTARSG*
Ga0126375_100122684	3300012948	Tropical Forest Soil	VTSRLDEPVTLILILAVGFLLILVLVGKVSALRIRRDGEAVAVRGLIVDALGRDPELYVWPLTAIVRVPLWIGSPVTIRVIGEVPSKEIKQAALLRVKHAAKAELCVRVRIKSRIGVTRSAPRAPLRTVRWG*
Ga0126375_106717242	3300012948	Tropical Forest Soil	LPHLDGEEAPLVTSRLDEPVALVLILATGFLLMLAFVGKVSSLRIRRDGEAVAVRGLVVDALGRDPELYVWPLTAIVRVPLWIGSPVTIRVIGEVPSKEIKQAALLRVKHAAKAELCVRVRIKSRIGVT
Ga0134077_100056558	3300012972	Grasslands Soil	LPHLDGEEATLVASRLDDPIALVLLLAAGLLLVLALVGKVSALRLKRDGEAVAVRGMVVDALGHDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRAALLRVKHTAAAELSVRVRIKSRIGVAPRAAARPELRTARSG*
Ga0132258_1000182724	3300015371	Arabidopsis Rhizosphere	VRGVSAIRRSPRRFWLVASPLPLAVRQEATHVSLSTPLEGPITLVLALAVGLLLLLALVGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGIAPAATLLRRARSR*
Ga0132256_1000292435	3300015372	Arabidopsis Rhizosphere	LPLAVRQEATHVSLSTPLEGPITLVLALAVSLLLLLALVGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGIAPAATLLRRARSR*
Ga0182034_104239821	3300016371	Soil	VTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVAP
Ga0182040_106901561	3300016387	Soil	VTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVAPGAPT
Ga0066655_104672782	3300018431	Grasslands Soil	VTSRLDEPIALVLILAAGLLLVLALAGKVSALRLKRDGEAVAVRGLIVDALGHDPDLLAWPLTAMVRVPLWSGSPVTIRVIGEVPSKELKRAALRRVKQTAIAKLSVRVRIKSRIGVAPRAATRAELRTARSG
Ga0207712_117483431	3300025961	Switchgrass Rhizosphere	KSCSTATATSCAACAPSAARLGVFDWWHLPCLSLSREEATHVSLSTPLEGPITLVLALAVGLLLLLALIGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGIAPAATLLRRARSR
Ga0209239_10183074	3300026310	Grasslands Soil	VTSRLDEPISLVLILAAGLLLVLALAGKVSALRLKRDGEAVAVRGLIVDALGHDPDLLAWPLTAMVRVPLWSGSPVTIRVIGEVPSKELKRAALRRVKQTAIAKLSVRVRIKSRIGVAPRAATRAELRTARSG
Ga0209470_100013129	3300026324	Soil	VASRLDDPIALVLLLAAGLLLVLALVGKVSALRLKRDGEAVAVRGMVVDALGHDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRAALLRVKHTAAAELSVRVRIKSRIGVAPRAAARPELRTARSG
Ga0209470_11538782	3300026324	Soil	VTSRLDEPIALVLILAAGLLLVLALVGKVSALRLKRDGEAVAVKGLIVDALGHDAELLAWPLSATVRVPLWRGSPVTIRVIGEVPSKDLRLVALRRVKHTAIAELSVRVRIKSRIRVAPNAPTRPALRTARSG
Ga0209804_12956441	3300026335	Soil	VLPRHGRRHERAPSFIPRSPRRFSEVASRLPRLDGQEAALVTSRLDEPISLVLILAAGLLLVLALAGKVSALRLKRDGEAVAVRGLIVDALGHDPDLLAWPLTAMVRVPLWSGSPVTIRVIGEVPSKELKRAALRRVKQTAIAKLSVRVRIKSRIGVAPRAATRAELRTARSG
Ga0209161_103804031	3300026548	Soil	LLLVLALAGKVSALRLKRDGEAVAVRGLIVDALGHDPDLLAWPLTAMVRVPLWSGSPVTIRVIGEVPSKELKRAALRRVKQTAIAKLSVRVRIKSRIGVAPRAATRAELRTARSG
Ga0209466_10602121	3300027646	Tropical Forest Soil	VAPSLPHLDGEEAPLVTSRLDEPVTLILILAVGFLLILVLVGKVSALRIRRDGEAVAVRGLIVDALGRDPELYVWPLTAIVRVPLWIGSPVTIRVIGEVPSKEIKQAALLRVKHAAKAELCVRVRIKSRIGVTPSAARAPLRPVRWG
Ga0209814_100578012	3300027873	Populus Rhizosphere	VSLSTPLEGPITLVLALAVGLLLLLALIGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGIAPAATLLRRARSR
Ga0209465_100639132	3300027874	Tropical Forest Soil	VAPSLPHLDGEEAPLVTSRLDEPVALVLILATGFLLMLAFVGKVSSLRIRRDGEAVAVRGLVVDALGRDPELYVWPLTAIVRVPLWIGSPVTIRVIGEVPSKELKQAALLRVKHAAKAELCVRVRIKSRIGVTPSAARAPLRPVRWG
Ga0209481_1000030719	3300027880	Populus Rhizosphere	VSLSTPLEGPITLVLALAVGLLLLLALIGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGIAPATTLLRRARSR
Ga0207428_1000013828	3300027907	Populus Rhizosphere	VSLSTPLEGPITLVLALAVGLLLMLALVGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGVAPAATLLGRARSR
Ga0310888_100271902	3300031538	Soil	VSLSTPLEGPITLVLALAVGLLLLLALIGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGIAPAATLFRRARSR
Ga0318516_105332242	3300031543	Soil	VTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVASGAPTRPELR
Ga0318534_101439542	3300031544	Soil	VTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVAPGAPTRPELRTARSG
Ga0318541_101028202	3300031545	Soil	VTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVASGAPTRPELRTARSG
Ga0310887_101490322	3300031547	Soil	MHVSLSTPLEGPITLVLALAVGLLLLLALIGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGIAPAATLLRRARSR
Ga0318515_100608744	3300031572	Soil	VLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVAPGAPTRPELRTARSG
Ga0318555_100453461	3300031640	Soil	RCHQEATLVTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVASGAPTRPELRTARSG
Ga0307469_100252782	3300031720	Hardwood Forest Soil	VTSRLDEPVALVLIVAAGLLLVLALAGKVSALRLKRDGEAVAVKGLIIDALGHDPELVAWPLTATVRVPLWSGSPVTIRVIGEVPSKELKRAALSRVKHTATAELSVRVRIKSRIGVARSAAPRSVLRTARSG
Ga0307469_114915041	3300031720	Hardwood Forest Soil	MLVTSRLDEPVALVLILATGLLLILALVGKVSALRLRRDGEAVAVRGLIVDALGRDPELYAWPLTAMVRVPLWIGSPVTIRVIGEVPSKELKRAALLRVKNAAKAELSVRVRIKSRIGVTPSAATRAPLRTARSG
Ga0307468_1002968412	3300031740	Hardwood Forest Soil	VTSRLDESIALVLILAAGLLLVLALVGKVSALRLRRDGEAVAVKGLIVDALGHDPQLLAWPLSATVRVPLWRGSPVTIRVIGEVPSKDLRLAALRRVKHTAIAELSVRVRIRSRIGVAPNAPTRPALRTARSG
Ga0306918_110294461	3300031744	Soil	WSHQEATLVTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVAPGAPTRPELRTARSG
Ga0318492_101513761	3300031748	Soil	RSTCKSYHPGHRDGGPPRVIHHWPQCFSPVASSLPCWSHQEATLVTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVASGAPTRPELRTARSG
Ga0318535_101654891	3300031764	Soil	VLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVASGAPTRPELRTARSG
Ga0318498_101472202	3300031778	Soil	VTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVASG
Ga0310917_105080821	3300031833	Soil	LLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVASGAPTRPELRTARS
Ga0310904_106202991	3300031854	Soil	LSLSREEATHVSLSTPLEGPITLVLALAVGLLLLLALIGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGIAPAATLLRRARSR
Ga0306919_100333587	3300031879	Soil	RHPSLASVFSPVASSLPRWSHQEATLVTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVASGAPTRPELRTARSG
Ga0318536_101421512	3300031893	Soil	PCWSHQEATLVTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVAPGAPTRPELRTARSG
Ga0318522_103875891	3300031894	Soil	LLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVAPGAPTRPELRTARSG
Ga0310891_100298302	3300031913	Soil	VSLSTPLEGPITLVLALAVGLLLLLALIGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGIAPAATLLRR
Ga0310916_101458542	3300031942	Soil	VFFAGGIELASLSHQEATLVTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVAPGAPTRPELRTARSG
Ga0310903_104951821	3300032000	Soil	HLPCLSLSREEATHVSLSTPLEGPITLVLALAVGLLLLLALIGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGIAPAATLLRRARSR
Ga0318563_107238141	3300032009	Soil	CKSYHPGHRDGGPPRVIHHWPQCFRRWHRACLAGDQEATLVTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVASGAPTRPELRTARSG
Ga0318569_101746892	3300032010	Soil	VGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVASGAPTRPELRTARSG
Ga0318556_100137757	3300032043	Soil	TCKSYHPGRRDGGPPRVIHHWPQCFSPVASSLPCWSHQEATLVTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRIGVAPGAPTRPELRTARSG
Ga0318524_106025461	3300032067	Soil	VTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALRRVKHTAKAELAVRVRVRSRIGVA
Ga0310890_100124831	3300032075	Soil	VSLSTPLEGPITLVLALAVGLLLLLALIGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGIAPAATLLRRARS
Ga0318577_101930891	3300032091	Soil	VTSRLDEPIALVLLLAVGLLLVLALVGKISALRLRRDGEAVAVRGLIVDALARDPELLAWPLTATVRVPLWIGSPVTIRVIGEVPSKELKRTALQRVKHTAKAELAVRVRVRSRI
Ga0307471_1001593401	3300032180	Hardwood Forest Soil	LPPLDGEEAARVTSRLDEPVALVLIVAAGLLLVLALAGKVSALRLKRDGEAVAVKGLIIDALGHDPELVAWPLTATVRVPLWSGSPVTIRVIGEVPSKELKRAALSRVKHTATAELSVRVRIKSRIGVARSAAPRSVLRTARS
Ga0307471_1009386531	3300032180	Hardwood Forest Soil	VTSRLDEPVVLVMSVAAGLLLILALAGKVSALRLRRDGEAVAVKGLIVDALGHDPDLLAWPLTATVRVPLWSGSPVTVRVIGEVPSKELKRAALSRVKHTANAELSVRVRI
Ga0307471_1024722362	3300032180	Hardwood Forest Soil	VVACAAPGWAQTADATIPGADPARFDGPVVVLTVAAGVLLVLGLVGKVLDLRLKRDGETVAVKGLVADALARDPELFGLPLTATVRVPLWSGSPVIRVAGEVPSRELKRAVILRVKRTAT
Ga0307472_1013165991	3300032205	Hardwood Forest Soil	PCLSLSREEATHVSLSTPLEGPITLVLALAVGLLLLLALIGKLSDLRLKRDGEAVAVKGLIADALDRDPELLGLPFSAAVRVPLLRGKPVVIRISGEVPSDELKRVALRRVQHTAKAELLVRVRIRSRIGIAPAATLLRRARSR
Ga0307472_1017328122	3300032205	Hardwood Forest Soil	VTSRLDEPVALVLIVAAGLLLVLALAGKVSALRLKRDGEAVAVKGLIIDALGHDPELVAWPLTATVRVPLWSGSPVTIRVIGEVPSKELKRAALSRVKHTATAELSVRVRIKSRIGVARSAAPRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093458

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences