Metagenome Family F093456

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093456
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	147 residues
Representative Sequence	MHRFLLATLLALAAIPAVAFAAAKPGTYSGTSSGKYIQVGQAEEPTDHGKVSFTVRSSKVLNFKVRKQLFQCGPPNEIPVTVKTIKLNSKGKGSANYKDPSVGTLKVTITVTSAGKAKGTIRKPPSATGLCNSDYPVRFTAKR
Number of Associated Samples	85
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	31.13 %
% of genes near scaffold ends (potentially truncated)	42.45 %
% of genes from short scaffolds (< 2000 bps)	89.62 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.208 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (16.038 % of family members)
Environment Ontology (ENVO)	Unclassified (30.189 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 6.43% β-sheet: 40.35% Coil/Unstructured: 53.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
f.4.1.0: automated matches	d3qraa_	3qra	0.74552
f.4.1.0: automated matches	d4ayna1	4ayn	0.74092
f.4.1.3: GNA1870 immunodominant domain-like	d3hola1	3hol	0.72716
f.4.1.3: GNA1870 immunodominant domain-like	d3hola2	3hol	0.69881
f.4.1.1: Outer membrane protein	d1qjpa_	1qjp	0.66022

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF12680	SnoaL_2	3.77
PF01494	FAD_binding_3	2.83
PF00557	Peptidase_M24	1.89
PF14698	ASL_C2	1.89
PF00211	Guanylate_cyc	1.89
PF13417	GST_N_3	0.94
PF00106	adh_short	0.94
PF07883	Cupin_2	0.94
PF01266	DAO	0.94
PF12833	HTH_18	0.94
PF00999	Na_H_Exchanger	0.94
PF00578	AhpC-TSA	0.94
PF08031	BBE	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	5.66
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	2.83
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	2.83
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	2.83
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.89
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.94
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.94
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.94
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.94
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.94
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
All Organisms	root	All Organisms	36.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
cellular organisms	root	All Organisms → cellular organisms	36.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.89 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.47 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.94 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.94 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	9.43 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.55 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.89 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.94 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.94 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
Miltoncostaeales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales	5.66 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.66 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.83 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.89 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.94 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.94 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.94 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.94 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
Miltoncostaeaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae	5.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.66 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	1.89 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.89 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.94 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.94 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.94 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.94 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
Miltoncostaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea	5.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.66 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	1.89 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.89 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.94 %
Brevibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Brevibacillus	0.94 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.94 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.94 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
Miltoncostaea oceani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	5.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.66 %
Myxococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	1.89 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.89 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.94 %
Brevibacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Brevibacillus → Brevibacillus brevis	0.94 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.94 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.94 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
Miltoncostaea oceani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	5.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.66 %
Myxococcus stipitatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus stipitatus	1.89 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.89 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.94 %
Brevibacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Brevibacillus → Brevibacillus brevis	0.94 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.94 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.94 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0716295	Not Available	991	Open in IMG/M
3300000891\|JGI10214J12806_12736964	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1104	Open in IMG/M
3300003321\|soilH1_10307626	Not Available	1310	Open in IMG/M
3300003987\|Ga0055471_10018369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1642	Open in IMG/M
3300003987\|Ga0055471_10264788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Brevibacillus → Brevibacillus brevis	547	Open in IMG/M
3300003993\|Ga0055468_10153085	Not Available	688	Open in IMG/M
3300004114\|Ga0062593_100659798	Not Available	1011	Open in IMG/M
3300004156\|Ga0062589_100303462	Not Available	1236	Open in IMG/M
3300004156\|Ga0062589_101014370	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300004463\|Ga0063356_102416152	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus stipitatus	804	Open in IMG/M
3300004463\|Ga0063356_106050373	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus stipitatus	519	Open in IMG/M
3300004480\|Ga0062592_101949094	Not Available	579	Open in IMG/M
3300004480\|Ga0062592_102038712	Not Available	568	Open in IMG/M
3300004643\|Ga0062591_100791334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	873	Open in IMG/M
3300004643\|Ga0062591_100959422	Not Available	809	Open in IMG/M
3300005093\|Ga0062594_101151939	Not Available	763	Open in IMG/M
3300005093\|Ga0062594_103235063	Not Available	511	Open in IMG/M
3300005329\|Ga0070683_100197345	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300005343\|Ga0070687_100952351	Not Available	619	Open in IMG/M
3300005535\|Ga0070684_102021747	Not Available	544	Open in IMG/M
3300005546\|Ga0070696_101763107	Not Available	534	Open in IMG/M
3300005564\|Ga0070664_101207820	Not Available	713	Open in IMG/M
3300005577\|Ga0068857_100590982	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300005884\|Ga0075291_1044767	Not Available	586	Open in IMG/M
3300005886\|Ga0075286_1021550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	814	Open in IMG/M
3300005887\|Ga0075292_1033404	Not Available	712	Open in IMG/M
3300005889\|Ga0075290_1058607	Not Available	540	Open in IMG/M
3300006844\|Ga0075428_101276729	Not Available	773	Open in IMG/M
3300006845\|Ga0075421_100434649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1570	Open in IMG/M
3300006845\|Ga0075421_101417640	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300006846\|Ga0075430_100236107	Not Available	1515	Open in IMG/M
3300006918\|Ga0079216_11276450	Not Available	598	Open in IMG/M
3300006969\|Ga0075419_10071691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2196	Open in IMG/M
3300006969\|Ga0075419_11423439	Not Available	518	Open in IMG/M
3300007004\|Ga0079218_12181881	Not Available	642	Open in IMG/M
3300009094\|Ga0111539_10750732	Not Available	1136	Open in IMG/M
3300009094\|Ga0111539_13016303	Not Available	544	Open in IMG/M
3300009098\|Ga0105245_12159504	Not Available	611	Open in IMG/M
3300009100\|Ga0075418_11337606	Not Available	777	Open in IMG/M
3300009147\|Ga0114129_10284100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2210	Open in IMG/M
3300009148\|Ga0105243_10464332	Not Available	1191	Open in IMG/M
3300009148\|Ga0105243_12156622	Not Available	593	Open in IMG/M
3300009156\|Ga0111538_10070947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4435	Open in IMG/M
3300009156\|Ga0111538_11214111	Not Available	953	Open in IMG/M
3300009156\|Ga0111538_11322486	All Organisms → cellular organisms → Bacteria → Terrabacteria group	910	Open in IMG/M
3300009553\|Ga0105249_13081684	Not Available	535	Open in IMG/M
3300009789\|Ga0126307_10599122	Not Available	890	Open in IMG/M
3300009789\|Ga0126307_11701405	Not Available	513	Open in IMG/M
3300009840\|Ga0126313_10671002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	838	Open in IMG/M
3300009840\|Ga0126313_11166929	Not Available	634	Open in IMG/M
3300010036\|Ga0126305_10045103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	2477	Open in IMG/M
3300010036\|Ga0126305_10799812	Not Available	641	Open in IMG/M
3300010037\|Ga0126304_10072311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	2136	Open in IMG/M
3300010037\|Ga0126304_10751565	Not Available	660	Open in IMG/M
3300010038\|Ga0126315_10696737	Not Available	663	Open in IMG/M
3300010040\|Ga0126308_10025577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	3239	Open in IMG/M
3300010040\|Ga0126308_11043074	Not Available	574	Open in IMG/M
3300010041\|Ga0126312_10391803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	987	Open in IMG/M
3300010044\|Ga0126310_10314944	Not Available	1083	Open in IMG/M
3300010044\|Ga0126310_11782295	Not Available	513	Open in IMG/M
3300010045\|Ga0126311_10674039	Not Available	825	Open in IMG/M
3300010045\|Ga0126311_10738373	Not Available	789	Open in IMG/M
3300010166\|Ga0126306_11200175	Not Available	623	Open in IMG/M
3300010397\|Ga0134124_11709061	Not Available	662	Open in IMG/M
3300012529\|Ga0136630_1186390	Not Available	748	Open in IMG/M
3300012684\|Ga0136614_10119821	All Organisms → cellular organisms → Bacteria	1995	Open in IMG/M
3300012883\|Ga0157281_1091139	Not Available	539	Open in IMG/M
3300012897\|Ga0157285_10051328	Not Available	1007	Open in IMG/M
3300012897\|Ga0157285_10215819	Not Available	611	Open in IMG/M
3300012955\|Ga0164298_11654570	Not Available	506	Open in IMG/M
3300013096\|Ga0157307_1167615	Not Available	523	Open in IMG/M
3300014254\|Ga0075312_1008527	Not Available	1689	Open in IMG/M
3300014263\|Ga0075324_1029956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	997	Open in IMG/M
3300014272\|Ga0075327_1127166	Not Available	783	Open in IMG/M
3300014325\|Ga0163163_10079735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3272	Open in IMG/M
3300014326\|Ga0157380_13466891	Not Available	505	Open in IMG/M
3300015077\|Ga0173483_10286130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300015201\|Ga0173478_10847507	Not Available	507	Open in IMG/M
3300015371\|Ga0132258_12725626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1232	Open in IMG/M
3300018076\|Ga0184609_10533392	Not Available	531	Open in IMG/M
3300018429\|Ga0190272_12307532	Not Available	580	Open in IMG/M
3300018432\|Ga0190275_10045535	All Organisms → cellular organisms → Bacteria	3632	Open in IMG/M
3300018465\|Ga0190269_11410722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	566	Open in IMG/M
3300018466\|Ga0190268_11732744	Not Available	559	Open in IMG/M
3300019361\|Ga0173482_10373560	Not Available	654	Open in IMG/M
3300019767\|Ga0190267_10411350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	760	Open in IMG/M
3300020181\|Ga0196958_10032935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1539	Open in IMG/M
3300021184\|Ga0196959_10081945	Not Available	717	Open in IMG/M
3300022915\|Ga0247790_10044422	Not Available	1011	Open in IMG/M
3300023064\|Ga0247801_1047685	Not Available	648	Open in IMG/M
3300025537\|Ga0210061_1052996	Not Available	689	Open in IMG/M
3300025792\|Ga0210143_1022649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1094	Open in IMG/M
3300025908\|Ga0207643_10097249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	1723	Open in IMG/M
3300025944\|Ga0207661_10162626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1938	Open in IMG/M
3300025945\|Ga0207679_10935163	Not Available	794	Open in IMG/M
3300025961\|Ga0207712_11350112	Not Available	637	Open in IMG/M
3300026020\|Ga0208531_1013902	Not Available	712	Open in IMG/M
3300026535\|Ga0256867_10325404	Not Available	540	Open in IMG/M
3300027909\|Ga0209382_10012998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10238	Open in IMG/M
3300028771\|Ga0307320_10450155	Not Available	519	Open in IMG/M
3300028878\|Ga0307278_10328205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	675	Open in IMG/M
3300030619\|Ga0268386_10694172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	665	Open in IMG/M
3300031228\|Ga0299914_10038613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4034	Open in IMG/M
3300031229\|Ga0299913_10157716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2240	Open in IMG/M
3300031229\|Ga0299913_10304514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1580	Open in IMG/M
3300034172\|Ga0334913_030653	Not Available	1168	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.58%
Host-Associated	Host-Associated	26.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.04%
Plants	Host-Associated → Plants	26.42%
Aquatic	Environmental → Aquatic	7.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.75%
Marine	Environmental → Aquatic → Marine	4.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.72%
Freshwater	Environmental → Aquatic → Freshwater	1.89%
Sediment	Environmental → Aquatic → Sediment	0.94%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.55%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.72%
Loam	Environmental → Terrestrial → Soil → Loam	4.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.77%
Ice	Environmental → Aquatic → Freshwater → Ice	1.89%
Sand	Environmental → Terrestrial → Soil → Sand	1.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	13.21%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.55%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.77%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.83%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.89%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.04%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	16.04%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.49%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.72%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.83%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.94%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300005889	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012529	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ568 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300014254	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2	Environmental	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300025537	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026020	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403 (SPAdes)	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_07162952	2228664021	Soil	MFVLMRRFLLASFLVLAAIPGVAFAAPKAGTYSGTSSGKYIQVGQAAEPTDKGKVSFTVKSGKVKNFKVKGQLFQCGPPNEIPVTVKTIKLSSKGKGSATYKDPAVGTLKVTITVTSAGKASGTVRKSPSAIGLCDPDYPVRFTAKRR
JGI10214J12806_127369641	3300000891	Soil	MRRFLLASLLALIAVPAVAFAAPKPGTYSGTSSGKYIQVGQAKEPTDRGKVSFTVKSGKVKNFKVKGQLFQCGPPAEVPVTVKTIKLSSKGKGSATYKDPAVGTLKVTITVTSRGKASGTVRRSPSAIGLCDSDFPVRFTAKRR*
soilH1_103076262	3300003321	Sugarcane Root And Bulk Soil	MFVSMRRFLLILLLAFAGIPAVAFASAKPGTYAGTSSGKYIQVGQANEPTDRGKVSFTVRSGKVVNFKVKGQLFQCGPPNEIPVTVKTIKLSKKGKGSASYKDPAVGTLKVTITVTSRGKASGTISKPSSAIGLCDPDYPVRFTAKRR*
Ga0055471_100183693	3300003987	Natural And Restored Wetlands	MFVPMPRYLLCSLLALAAIPGVAFAAAKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRNSKVLNFKVKGQLFQCGPPAEIRVTVKTIRLNSKGKGSATYKDPNVGTLKVTITVTSAGKASGTVRKPPSATGLCSSDYPVRFTAKRR*
Ga0055471_102647881	3300003987	Natural And Restored Wetlands	SLLVLAAMPGVAFAAPKSGTYSGTSSGKYIQVGQAAEPTDRGKVSFTIRDRKVRNFKVKGQLFQCGPPNEIPVTVKTIKLSSKGKGSATYKHPSIGTLKVTITVTSAGKASGTVRRPPAGAGLCDPDYPVRFTAKRR*
Ga0055468_101530852	3300003993	Natural And Restored Wetlands	MFVPMPRYLLCSLLALAAIPGVAFAAAKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRSSKVLNLKVRGQLFQCGPPAEIGVTVKTIRLNSKGKGSATYKDPNVGTLKITISVTSAGKTSGTVRKPPSATGLCSSDYPVRFTAKRR*
Ga0062593_1006597982	3300004114	Soil	MSIRIRWFLIACLVGLIAVPAAALGAAKSGTYSGTSKGKYIQVGQVTEPTDRGKVSFTVRRGKVVNFKVRKQLFQCGPPNEVDVTIKTIKLNSKGKGSANYKDQSIGTLKVTITVTSAGKASGTVRKPPSATGLCDPDYPVRFTAKRR*
Ga0062589_1003034623	3300004156	Soil	MSTRIRWFLIACLVSLIAIPAAALAAAKSGTYSGTSKGKYIQVGQVTEPTDRGKVSFTVRRSKVVNFKVRKQLFQCGPPNEVDVTIKTIKLNSKGKGSATYKDQNIGTLKVTITVTSAGKASGTVRKPPSAAGLCDPDYPVRFTAKHR*
Ga0062589_1010143701	3300004156	Soil	MKRLVTSAALLLAAIPAVAFAAAKPGSYSGVSSAKYVQVGSVTEPTDKGKVTFSVKSSKALNFKMTGQQMNCGPGPVVNVSVKTIKLNSKGKGSATYKDPNVGTLKVTLTVTSTGKASGTVRRPPSAVGLC
Ga0063356_1024161521	3300004463	Arabidopsis Thaliana Rhizosphere	MFVLMRRFLLASFLVLAAIPGVAFAAPKAGTYSGTSSGKYIQVGQAAEPTDKGKVSFTVKSGKVKNFKVKGQLFQCGPPNEIPVTVKTIKLSSKGKGSATYKDPAVGTLKVTITVTSAGKASGTVRKSPSAIGLCDPDYPVRFTAKRR*
Ga0063356_1060503731	3300004463	Arabidopsis Thaliana Rhizosphere	MRRFLLASLLVLIAVPAVAFAAPKPGTYSGTSSGKYIQVGQAKEPTDRGKVSFTVKSGKVKNFKVKGQLFQCGPPAEVPVTVKTIKLSSRGKGSATYKDPAVGTLKVTITVTSRGKASGTVRRSPSAIGLCDSDFPVRFT
Ga0062592_1019490941	3300004480	Soil	ALAAIPAVAFAAAKPGTYKGTSSGKYIQVGQAEEPTDRGKVSFTVRSSKVLNFKVKGQLFQCGPPNVIPVTVKTIKLNSKGKGSANYKDPSIGTLKVTITVTSAGKAKGTIRKPPSATGLCNSDYPVRFTAKR*
Ga0062592_1020387121	3300004480	Soil	MRRLFLVFLLALAAIPAVALAAAKPGTYSGKSSGKYIQVGQADEPTDRGKVSFTVRSSKVVNFKVRGQLFQCGPPNEIDVTVKKIKLNSKGKGSANYKDLSVGTLKVTITVTSSGKASGTVR
Ga0062591_1007913342	3300004643	Soil	MKRLVTSAALLLAAIPAVAFAAAKPGSYSGVSSAKYVQVGSVTEPTDKGKVTFSVKSSKALNFKMTGQQMNCGPGPVVNVSVKTIKLNSRGKGSATYKDPNVGTLKVTLTVTSTGKASGTVRRPPSAVGLCNPDYPAKFTAKRR*
Ga0062591_1009594221	3300004643	Soil	MRRLFLVFLLALAAIPAVALAAAKPGTYSGKSSGKYIQVGQADEPTDRGKVSFTVRSSKVVNFKVRGQLFQCGPPNEIDVTVKKIKLNSKGKGSANYKDLSVGTLKVTITVTSSGKASGTVRNPSSATGLCDPDFPVRFTAKRR*
Ga0062594_1011519392	3300005093	Soil	MKRLLIAALLSLLAAPAVAFAAAKPGSYSGVSSAKYVQVGSADEPTDKGKVTFTVKSSKVLNFRMKGQQMNCGPGPVVPVYVKTIKLNSSGKGSGTYKDPNVGTLKVSITVTSTGKASGTVRRPPSAVGLCNPDYPAKFTAKRG*
Ga0062594_1032350631	3300005093	Soil	LAAIPAVAFAAAKPGTYSGTSSGTYIQVGQAEEPTDHGKVSFTVRSSKVLNFKVRKQLFQCGPPNEIPVTVKTIKLNSKGKGSANYKDPNVGTLKVTITVTSAGKAKGTIRKPPSATGLCNSDYPVSFTAKRR*
Ga0070683_1001973451	3300005329	Corn Rhizosphere	MKRLVTSAALLLAAIPAVAFAAAKPGSYSGVSSAKYVQVGSVTEPTDKGKVTFSVKSSKALNFKMTGQQMNCGPGPVVNVSVKTIKLNSKGKGSATYKDPNVGTLKVTLTVTSTGKASGTVRRPPSAVGLCNPDYPAKFTAKRR*
Ga0070687_1009523512	3300005343	Switchgrass Rhizosphere	AFAAAKPGSYSGVSSAKYVQVGSVTEPTDKGKVTFSVKSSKALNFKMTGQQMNCGPGPVVNVSVKTIKLNSKGKGSATYKDPNFGTLKVTLTVTSTGKASGTVRRPPSAVGLCNPDYPAKFTAKRR*
Ga0070684_1020217471	3300005535	Corn Rhizosphere	GYGVCMKRLVTSAALLLAAIPAVAFAAAKPGSYSGVSSAKYVQVGSVTEPTDKGKVTFSVKSSKALNFKMTGQQMNCGPGPVVNVSVKTIKLNSRGKGSATYKDPNVGTLKVTLTVTSTGKASGTVRRPPSAVGLCNPDYPAKFTAKRR*
Ga0070696_1017631071	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSIRIRWFLIACLVGLMAVPAAALGAAKSGTYSGTSKGKYIQVGQVTEPTDRGKVSFTVRRGKVVNFKVRKQLFQCGPPNEVDVTIKTIKLNSKGKGSANYKDQSIGTLKVTITVTSAGKASGTVRKPPSATGLCDPDYPVRFTAKRR*
Ga0070664_1012078202	3300005564	Corn Rhizosphere	VVTRTKQGYGVCMKRLVTSAALLLAAIPAVAFAAAKPGSYSGVSSAKYVQVGSVTEPTDKGKVTFSVKSSKALNFKMTGQQMNCGPGPVVNVSVKTIKLNSKGKGSATYKDPNFGTLKVTLTVTSTGKASGTVRRPPSAVGLCNPDYPAKFTAKRR*
Ga0068857_1005909822	3300005577	Corn Rhizosphere	VVTRTKQGYGVCMKRLVTSAALLLAAIPAVAFAAAKPGSYSGVSSAKYVQVGSVTEPTDKGKVTFSVKSSKALNFKMTGQQMNCGPGPVVNVSVKTIKLNSRGKGSATYKDPNVGTLKVTLTVTSTGKASGTVRRPPSAVGLCNPDYPAKFTAKRR*
Ga0075291_10447671	3300005884	Rice Paddy Soil	GEPKLIAARAGRDRLVDVAVPVDQLSERSVVFLGNAQAKRCGVVGHPLHDLSPASAWRCIFVSMHRFLLASVLALAAIPAVAFAAPKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRSGKVLNFKVRKQLFQCGPPNEVPVTVKTIRLNSSGKGSAKYKDPNVGTLKVTITVTSSGKASGTVRKPPSATGLCD
Ga0075286_10215502	3300005886	Rice Paddy Soil	AKRCGVVGHPLHDLSPASAWRCIFVSMHRFLLASVLALAAIPAVAFAAPKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRSGKVLNFKVRKQLFQCGPPNEVPVTVKTIRLNSSGKGSAKYKDPNVGTLKVTITVTSSGKASGTVRKPPSATGLCDADYPVRFKAKRR*
Ga0075292_10334041	3300005887	Rice Paddy Soil	LVAARAGRDRLVDVAVPVDQLSERSVVFLGNVQAKRCGVVGHPLHDLSPPSAWRCIFVSMHRFLLASVLALAAIPAVAFAAPKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRSGKVLNFKVRKQLFQCGPPNEVPVTVKTIRLNSSGKGSAKYKDPNVGTLKVTITVTSSGKASGTVRKPPSATGLCDADYPVRFKAKRR*
Ga0075290_10586071	3300005889	Rice Paddy Soil	LGNAQAKRCGVVGHPLHDLSPASAWRCIFVSMHRFLLASVLALAAIPAVAFAAPKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRSGKVLNFKVRKQLFQCGPPNEVPVTVKTIRLNSSGKGSAKYKDPNVGTLKVTITVTSSGKASGTVRKPPSATGLCDADYPVRFKAKRR*
Ga0075428_1012767291	3300006844	Populus Rhizosphere	MFFPIHRFLLACLLALVAIPAVAFAAAKPGTYSGTTSGKYIQVGQAEEPTDRGKVSFTVRSSKVRNFKVRGQLFNCGLPPAEVKLTVKTIKLNSRGKGSASYKDPNVGTLKVTITVTSAGKAKGTVRKPPSATGLCNSDFPVRFTAKRG*
Ga0075421_1004346491	3300006845	Populus Rhizosphere	MFVPIHRFLLACLLALVAVPAVAFAAAKPGTYSGTTSGKYIQVGQAEEPTDRGKVSFTVRSSKVRNFKVRGQLFNCGLPPAEVKLTVKTIKLNSRGKGSASYKDPNVGTLKVTITVTSAGKAKGTVRKPPSATGLCNSDFPVRFTAKRG*
Ga0075421_1014176401	3300006845	Populus Rhizosphere	MHRFLIASILALAAIPGVAFAAAKPGTYSGTSSGKYIQVGQAQEPTDHGKVSFKVRSNKVRNFKVTGQLFQCGPPNEIPVTVKTIRLSSKGKGSANYKDPSIGTLKVTITVTSAGKAKGTIRKPSSAVGLCDSDYPVRFTAKRR*
Ga0075430_1002361071	3300006846	Populus Rhizosphere	DSMFVPIHRFLLACLLALVAVPAVAFAAAKPGTYSGTTSGKYIQVGQAEEPTDRGKVSFTVRSSKVRNFKVRGQLFNCGLPPAEVKLTVKTIKLNSRGKGSASYKDPNVGTLKVTITVTSAGKAKGTVRKPPSATGLCNSDFPVRFTAKRG*
Ga0079216_112764501	3300006918	Agricultural Soil	RFLLALLLALVAMPAVAFGAAKPGTYSGSTSGKYIQVGQAEEPTDRGKVSFTVKSSKVKNFKVRGQLFQCGPPAQIKVTVKTIKLNSKGKGSANYKDPSIGTLKVTITVTSAGKAKGTIRKPPSATGLCNSDYPVRFTAKRG*
Ga0075419_100716913	3300006969	Populus Rhizosphere	MFVPIHRFLLACLLALVAVPAVAFAAAKPGTYSGTTSGKYIQVGQAEEPTDRGKVSFTVRSSKVRNFKVRGQLFNCGLPPAEVKLTAKTIKLNSRGKGSASYKDPNVGTLKVTITVTSAGKAKGTVRKPPSATGLCNSDFPVRFTAKRG*
Ga0075419_114234391	3300006969	Populus Rhizosphere	MRRSEGPVIESRAMTSKRKSRTHAISTRSFVLVACLLALAAIPAVALAAAKPGTYKGTSSGKYIQVGQADEPTDRGKVSFTVKSSRVLNFKVRKQLFQCGPPAELLLNVKTIKLNSKGKGSANYKDPSVGTLKVTITVTSAGKAKGTIRKPPSATGLCNS
Ga0079218_121818811	3300007004	Agricultural Soil	MHRFLLALLLALAAIPALALAAAKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVKSSKVKNFKVRGQLFHCGLPPAEVRVTVKTIKLNSKGKGSASYKDPNVGTLKVTITVTSAGKAKGTVRKPPSATGLCNSDFPVRFTAKRR*
Ga0111539_107507322	3300009094	Populus Rhizosphere	MFLVFLLALAAVPAVAFAAAKPGSYSGKSSGKYIQIGQADEPTDRGKVSFTVRSSKVLNFKVRGQLFQCGPPNEVDVTVKKIKLNSRGKGSANYKDPSIGTLKVTITVTSSGKASGTVRNPSSATGLCDPDFPVRFTAKRR*
Ga0111539_130163031	3300009094	Populus Rhizosphere	AAALGAAKSGTYSGTSKGKYIQVGQVTEPTDRGKVSFTVRRGKVVNFKVRKQLFQCGPPNEVDVTIKTIKLNSKGKGSANYKDQSIGTLKVAITVTSAGKASGTVRKPPSATGLCDPDYPVRFTAKRR*
Ga0105245_121595041	3300009098	Miscanthus Rhizosphere	AGEGCAMTSKRNSRTHATSTRSFVLIASLFALAAIPAVAFAAAKPGTYKGTSSGKYIQVGQAQEPTDRGKVSFTVRRSKVLNFKVKGQLFQCGPPNVIPVTVKTIKLNSKGKGSANYKDPNVGTLKVTITVTSAGKASGTIRTPRSAAGLCSPDYPVRFTAKR*
Ga0075418_113376062	3300009100	Populus Rhizosphere	MFVPIHRFLLACLLALVAVPAVAFAAAKPGTYSGTTSGKYIQVGQAEEPTDRGKVSFTVRSSKVRNFKVRGQLFNCGLPPAEVKLTVKTIKLNSRGKGSASYKDPNVGTLKVTITVTSAGKAKGTVRKPPSAT
Ga0114129_102841004	3300009147	Populus Rhizosphere	MHRFLLASILALAAIPGVAFAAAKPGTYSGTSSGRYIQVGQAQEPTDHGKVSFKVRSNKVRNFKVTGQLFQCGPPNEIPVTVKTIRLSSKGKGSANYKDPSIGTLKVTITVTSAGKAKGTIRKPSSATGLCDSDYPVRFTAKRR*
Ga0105243_104643321	3300009148	Miscanthus Rhizosphere	MRRFLLASLLALAAIPAVAFAAAKPGTYSGTTSGKYIQVGQATEPTDHGKVSFTVKSGKVLNFKVKGQLFQCGPPNEIPVTVKTIKLNSKGKGSANYKDPSIGTLKVTITVTSAGKAKGTIRKPPSATGLCNSDYPVRFTAKR*
Ga0105243_121566221	3300009148	Miscanthus Rhizosphere	MVDTDHMKRLIVVTALTVTAIPAVALAAAKPGPYKGVSSAKYVQVGSVTEPTDKGKVTFSVKSSKALNFKMTGQQMNCGPGPVVNVSVKTIKLNSKGKGSATYKDPNFGTLKVTLTVTSTGKASGTVRRPPSAVGLCNPDYPAKFTAKRR*
Ga0111538_100709476	3300009156	Populus Rhizosphere	MHRFLIASILALAAIPGVAFAAAKPGTYSGTSSGRYIQVGQAQEPTDHGKVSFKVRSNKVRNFKVTGQLFQCGPPNEIPVTVKTIRLSSKGKGSANYKDPSIGTLKVTITVTSAGKAKGTIRKPSSAVGLCDSDYPVRFTAKRR*
Ga0111538_112141111	3300009156	Populus Rhizosphere	MRRILLLALILPASLPAVAAAAAKPGSYAGTSSAKYVQVGSATEPTDKGKVTFSVKTNKVLNFRLKGQQMNCGPGPVVPVSLKTIKLNSKGKGSALYQDPNVGTLKVSITVTSTGKASGTIRRPPSAVGLCNPDYPVRFTAKRT*
Ga0111538_113224861	3300009156	Populus Rhizosphere	KSGTYSGTSKGKYIQVGQVTEPTDRGKVSFTVRRGKVVNFKVRKQLFQCGPPNEVDVTIKTIKLNSKGKGSANYKDQSIGTLKVAITVTSAGKASGTVRKPPSATGLCDPDYPVRFTAKRR*
Ga0105249_130816841	3300009553	Switchgrass Rhizosphere	KRKSGTHATSTRLFALIAFLLALAAIPAVAFAAAKPGAYKGTSSGKYIQVGQAQEPTDHGKVSFTVRSSKVLNFKVRKQLFQCGPPNNIPVFVKTIKLNSKGKGSATYKNPNVGTLKVTITVTSAGKAKGTIRKPPSATGLCNSDYPVSFTAKRR*
Ga0126307_105991221	3300009789	Serpentine Soil	VAVAAAKPGSYSGTSKAKYVQVGSATEPTDTGKVTFKVRTNKVLNFRLRNQQMNCGPGPVVPVTVEKIKLNSMGKGSALYRDPNVGTLKVSITVTSTGKASGTIRRPPSAIGLCNPDYPVRFTAKRT*
Ga0126307_117014052	3300009789	Serpentine Soil	MRRILLLALLLPASLPAVAIAAAKPGSYSGTSSAKYVQVGSTTEPIDKGKVTFSVRTSKVLNFRLKDQQMNCGPGPVVPVFVKTIKLNSSGKGSALYKDPNVGTLKVSITVTSTGKASGTIRRPPSAVGLCNPDYPVRF
Ga0126313_106710021	3300009840	Serpentine Soil	MRRILLLALLLPASLPAVAVAAAKPGSYSGTSSAKYVQVGSATEPIDKGKVTFSVRTSKVLNFRLKDQQMNCGPGPVVPVFVKAIKLNSRGKGSALYKDPNVGTLKVSITVTSTGKASGTIRRPPSAVGLCNPDYPVRFTAKRV*
Ga0126313_111669291	3300009840	Serpentine Soil	MRRILLLALILPASLPAVAIAAAKPGSYSGTSKAKYVQVGSATEPTDTGKVTFRVRSNKVRNFRLKDQQMNCGPGPVVPVSVDTIKLNSRGKGSAIYKDPNVGTLKVSIRVTSTGKASGTIRRPPSAIGLCSPDYPVRFTAKRT*
Ga0126305_100451032	3300010036	Serpentine Soil	MRRILLLALLLPASLPAVAVAAAKPGSYSGTSSAKYVQVGSATEPIDKGKVTFSVRTSKVLNFRLKDQQMNCGPGPVVPVFVKAIKLNSRGKGSALYKDPNVGTLKVSITVTSTGKASGTIRRPPSAVGLCNPDYPVRFTAKRT*
Ga0126305_107998121	3300010036	Serpentine Soil	MRRILLLALILPASLPAVAVAAAKPGSYSGTSSAKYVQVGSATEPTDTGKVTFRVRSNKVLNFRLSNQQMNCGPGPVVPVAVKTIKLNSRGKGSALYKDPNVGTLKVSIRVTSTGKASGTIRRPPSAVGLCNPDYPVRFTAKRT*
Ga0126304_100723111	3300010037	Serpentine Soil	MRRILLLALLLPASLPAVAVAAAKPGSYSGTSSAKYVQVGSTTEPIDKGKVTFSVRTSKVLNFRLKDQQMNCGPGPVVPVFVKAIKLNSRGKGSALYKDPNVGTLKVSITVTSTGKASGTIRRPPSAVGLCNPDYPVRFTAKRT*
Ga0126304_107515651	3300010037	Serpentine Soil	NLACMRRILLLALILPASLPAVAIAAAKRGSYSGTSSAKYVQVGSATEPTDTGKVTFRVRTNKVLNFRLKNQQMNCGPGPVVPVAVKTIKLNSRGKGSALYKDPNVGTLKVSIKVTSTGEASGTIRRPPSAVGLCNPDYPVRFTAKRT*
Ga0126315_106967371	3300010038	Serpentine Soil	MFVPMHRFLLASLLALAAIPAVAFAAAKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFKVRSSKVLNFKVRGQLFQCGPPNEVPVTVKTIRLNSRGKGSATYKDPDVGPLKVTITVTSAGKAKGTVRKPPSATGLCNPDYPVRFTAKRR*
Ga0126308_100255773	3300010040	Serpentine Soil	MRRILLLALLLPASLPAVAVAAAKPGSYSGTSSAKYVQVGSATEPIDKGKVTFSVRTSKVLNFRLKGQQMNCGPGPVVPVFVKAIKLNSRGKGSALYKDPNVGTLKVSITVTSTGKASGTIRRPPSAVGLCNPDYPVSFTAKRA*
Ga0126308_110430741	3300010040	Serpentine Soil	MHRLLLACLLAVVAIPAVAFAAAKPGTYKGTSSGKYIQVGQADEPTDRGKVSFKVRSSKVLNFKVRGQLFQCGPPNEIPLTIKTIKLNSRGKGSANYKDPNVGTLKITITVTSAGKAKGTVRKPPSATGLCNSDYPVRFTAKRR*
Ga0126312_103918032	3300010041	Serpentine Soil	MRRILLLALLLPASLPAVAVAAAKPGSYSGTSSAKYVQVGSATEPIDKGKVTFSVRTSKVLNFRLKDQQMNCGPGPVVPVFVKAINLNSRGKGSALYKDPNVGTLKVSITVTSTGKASGTIRRPPSAVGLCNPDYPVSFTAKRA*
Ga0126310_103149442	3300010044	Serpentine Soil	MRRTVFLALMLAASLPAVAVAAAKPGTYSGASSAKYVQVGSATEPTDTGKVTFRVRSNKVRNFRLKDQQMNCGPGPVVPVSVDTIKLNSRGKGSAIYKDPNVGTLKVSIRVTSTGKASGTIRRPPSAIGLCNPDYPVRFTAKRT*
Ga0126310_117822951	3300010044	Serpentine Soil	MSRILLLALLLPASLPAVAVAAAKQGSSSGTSSAKYVQVGSATEPIDKGKVTFSVRTSKVLNFRLKGQQMNCGPGPVVPVFVKAIKLNSRGKGSALYKDPNVGVLKVSITVTSTGKASGTIRRPPSAVGLCNPDYPVSFTAKRA*
Ga0126311_106740392	3300010045	Serpentine Soil	MRRILLLALLLPASLPAVAVAAAKPGSYSGTSSAKYVQVGSATEPIDKGKVTFSVRTSKVLNFRLKDQQMNCGPGPVVPVFVKAIKLNSRGKGSALYKDPNVGTLKVSIRVTSTGKASGTIRRPPSAVGLCNPDYPVRFTAKRT*
Ga0126311_107383731	3300010045	Serpentine Soil	LPIGESRAMTITRKTPTHATRTRSFVLIASLLTLAAIPTFAFAAAKPGTYKGTSSGKYVQVGQADEPTDRGKVSFTVKSSKVLNFKVRKQLFQCGPPNEIPVTVKTIKLNSKGKGSASYKDPSVGTLKVTITVTAAGKAKGTVRKPPSATGLCDSDYPVRFTAKR*
Ga0126306_112001751	3300010166	Serpentine Soil	SYSGTSSAKYVQVGSATEPIDKGKVTFSVRTSKVLNFRLKDQQMNCGPGPVVPVAVKTIKLNSSGKGSALYKDPNVGTLKVSITVTSTGKASGTIRRPPSAVGLCNPDYPVRFTAKRT*
Ga0134124_117090611	3300010397	Terrestrial Soil	MKRLVTSAALLLAAIPAVAFAAAKPGSYSGVSSAKYVQVGSVTEPTDKGKVTFSVKSSKALTFKMTGQQMNCGPGPVVNVSVKTIKLNSRGKGSATYKDPNVGTLKVTLTVTSTGKASGTVRRPPSAVGLCNPDYPAKFTAKRR*
Ga0136630_11863901	3300012529	Polar Desert Sand	VAVAAAKPGSYSGTSSAKYVRVGSATEPTDTGKVTFRVRTNKVLNFRLRNQQMNCGPGGPVVPVTVETIKLNSLGKGSALYKNPNVGTLKVSIRVSSTGKASGTIRRPPSAIGLCNPDYPVRFTAKRT*
Ga0136614_101198212	3300012684	Polar Desert Sand	MVDAAAWYTPLWLVRMRRLLLLALILPACLPAVAVAAAKPGSYSGTSSAKYVRVGSATEPTDTGKVTFRVRTNKVLNFRLRNQQMNCGPGGPVVPVTVETIKLNSLGKGSALYKDPNVGTLKVSIRVSSTGKASGTIRRPPSAIGLCNPDYPVRFTAKRT*
Ga0157281_10911391	3300012883	Soil	AFAAAKPGSYSGVSSAKYVQVGSVTEPTDKGKVTFSVKSSKALNFKMTGQQMNCGPGPVVNVSVKTIKLNSKGKGSANYKDPSVGTLKVTITVTSAGKAKGTVRKPPSATGLCNSDYPVRFTAKR*
Ga0157285_100513281	3300012897	Soil	MRRILLLALILPAALPAVAVAAAKPGSYAGTSSAKYVQVGSASEPTDKGKVTFSVKTNKVLNFRLKGQQMNCGPGPVVPVSVKTIKLNSKGKGSALYEDPNVGTLKVSITVTSTGKASGTIRRPPSAVGLCNPDYPVRFTAKRT*
Ga0157285_102158191	3300012897	Soil	MTSKRKSRTHATSTRSFVLIASLLALAAIPAVAFAAAKPGTYKGTSSGKYIQVGQAQEPTDHGKVSFTVRSSKVLNFKVKGQLFQCGPPNEIPVTVKRIKLNSKGKGSASYKDPNVGTLKVTITVTSAGKAKGTIRKPPSATGLCNSDYPVRFTAKR*
Ga0164298_116545701	3300012955	Soil	AHAGARPGTYKGTSSGKYVQVGQATEPTDKGKVTFTVRSSKVLNFRVRGQLFQCGPPNEVPVTVKTIRLNASGKGSATYTDPYVGPLRVAITVTPQGRASGTIRRPASGAGLCNPDYPVRFTARRT*
Ga0157307_11676151	3300013096	Soil	GMSTRIRWFLIACLVSLIAIPAAALAAAKSGTYSGTSKGKYIQVGQVTEPTDRGKVSFTVRRSKVVNFKVRKQLFQCGPPNEVDVTIKTIKLNSKGNGSATYKDQNIGTLKVTITVTSAGKASGTVRKPPLAAGLCDPDYPVRFTAKHR*
Ga0075312_10085274	3300014254	Natural And Restored Wetlands	MFVPMPRYLLCSLLALAAIPGVAFAAAKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRSSKVLNLKVRGQLFQCGPPAEIGVTVKTIRLNSKGKGSATYKDPNVGTLKVTITVTSAGKASGTVRKPPSATGLCSSDYPVRFTAKRR*
Ga0075324_10299563	3300014263	Natural And Restored Wetlands	MFVPMPRYLLCSLLALAAIPGVAFAAAKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRSSKVLHLKVRGQLFQCGPPAEIGVTVKTIRLNSKGKGSASYKDPNIGTLKVTITVTSAGKAKGTIRKPPSATGLCNSDY
Ga0075327_11271662	3300014272	Natural And Restored Wetlands	MFVPMPRYLLCSLLALAAIPGVAFAAAKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRSSKVLNLKVRGQLFQCGPPAEIGVTVKTIRLNSKGKGSATYKDPNVGTLKITISVTSAGKASGTVRKPPSATGLCSSDYPVRFTAKRR*
Ga0163163_100797353	3300014325	Switchgrass Rhizosphere	VVTRTKQGYGVCMKRLVTSAALLLAAIPAVAFAAAKPGSYSGVSSAKYVQVGSVTEPTDKGKVTFSVKSSKALNFKMTGQQMNCGPGPVVNVSVKTIKLNSKGKGSATYKDPNVGTLKVTLTVTSTGKASGTVRRPPSAVGLCNPDYPAKFTAKRR*
Ga0157380_134668911	3300014326	Switchgrass Rhizosphere	AAIPAVAFAAAKPGTYAGTSSGKYIQVGQAEEPTDHGKVSFTVRSSKVVNFKVRKQLFQCGPPNEIPVTVKTIKLNSKGKGSANYKDPNVGTLKVTITVTSAGKAKGTIRKPPSATGLCNSDYPVSFTAKRR*
Ga0173483_102861301	3300015077	Soil	LIACLVSLIAIPAAALAAAKSGTYSGTSKGKYIQVGQVTEPTDRGKVSFTVRRSKVVNFKVRKQLFQCGPPNEVDVTIKTIKLNSKGKGSATYKDQNIGTLKVTITVTSAGKASGTVRKPPLAAGLCDPDYPVR
Ga0173478_108475071	3300015201	Soil	AMTTKRRTRTHATSSRSFTLITSLLVLAAIPAVAFAAAKPGTYSGTTSGKYIQVGQADEPTDRGKVSFTVRSSKVVNFKVRGQLFQCGPPNEIDVTVKKIKLNSKGKGSANYKDLSVGTLKVTITVTSSGKASGTVRNPSSATGLCDPDFPVRFTAKRR*
Ga0132258_127256263	3300015371	Arabidopsis Rhizosphere	MFLVFLLALAAVPAVAFAAAKPGSYSGKSSGKYIQIGQADEPTDRGKVSFTVRSSKVLNFKVRGQLFQCGPPNEIDVTVKKIKLNSRGKGSANYKDPSIGTLKVTITVTSSGKASGTVRNPSSATGLCDPDFPVRFTAKRR*
Ga0184609_105333921	3300018076	Groundwater Sediment	MHRFLLASLLALAAVPAVAFAAAKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRSSKVLNFKVRRQRFQCGPASEVPVTVKTIRLNSRGKGSANYKDPNVGTLKVTITVTSAGKAKGTIRKPPSATGLCDSDYPVSFTAKRR
Ga0190272_123075321	3300018429	Soil	SRARAPSTSMFVPMRRFLLASLLALAAIPAVAFAAAKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRSSKVLNFKVRKQLFQCGPPNEIPVTVKTIRLNSRGKGSANYKNPNVGTLKVTITVTSAGKAKGTIRKPPSATGLCNPDYPVRFTAKRR
Ga0190275_100455355	3300018432	Soil	MFVPMHRFLLASLLALAAIPAVAFAAAKPGTYKGTSSGKYIQVGQAEEPTDRGRVSFTVRSSKVLNFKVRGQLFQCGPPNEIPVTIKTIRLNSRGKGSASYKNPNVGTLKVTITVTSAGKAKGTVRKPPSATGLCSSDYPVSFTAKRH
Ga0190269_114107222	3300018465	Soil	MRRILLASLVALAAISGVAFAAAKPGTYKGTSSGKYIQVGQAEEPTDRGKVSFTVKSSKVLNFKVRGQLFQCGPPNEIPVTVKTIKLNSKGKGSANYKNPNIGTLKVTITVTSAGKASGKIRKPPSATGLCNPDYPVSFTAKRR
Ga0190268_117327441	3300018466	Soil	IPVVASGLGKKVAPGHQGTCTLVPMHRFILVSLLALAAIPAVAFTAAKSGTYKGTSSGKYIQVGQAEEPTDRGKVSFTVQSSKVRNFKVRKQLFQCGPPNEVLVTVKTIRLNSKGKGSANYKDPNIGTLKVTIKVTSAGKASGTVRKPPSATGLCNSDYPVRFTAKRR
Ga0173482_103735601	3300019361	Soil	MKRLVTSAALLLAAIPAVAFAAAKPGSYSGVSSAKYVQVGSVTEPTDKGKVTFSVKSSKALNFKMTGQQMNCGPGPVVNVSVKTIKLNSKGKGSATYRDPNFGTLKVTLTVTSTGKASGTVRRPPSAVGLCNPDYPAKFTAKRR
Ga0190267_104113502	3300019767	Soil	MFVRMRRFLLASLLALAAIPAVAFAAAKPGTYKGTSSGKYIQVGQADEPTDRGKVSFTVRSGKVLNFKVRGQLFQCGPPNEIPVTVKTIRLNSRGKGSANYKDPNVGTLKVTITVTSAGKASGSVRKPPSATGLCNSDYPVRFTAKRR
Ga0196958_100329352	3300020181	Soil	MRRILLLALVLSASVPAVAVAAAKPGSYSGTSSAKYVQVGSATEPTDTGKVTFKVRDSKVLNFRLKGQQMNCGPGPVVPVSVEKIKLNSRGKGSALYKDPNVGTLKVSIKVTSTGKASGTIRRPPSAIGLCNPDYPVRFTAKRT
Ga0196959_100819451	3300021184	Soil	LSASVPAVAVAAAKPGSYSGTSSAKYVQVGSATEPTDTGKVTFKVRDSKVLNFRLKGQQMNCGPGPVVPVSVEKIKLNSRGKGSALYKDPNVGTLKVSIKVTSTGKASGTIRRPPSAIGLCNPDYPVRFTAKRT
Ga0247790_100444222	3300022915	Soil	MRRLFLVFLLALAAIPAVALAAAKPGTYSGKSSGKYIQVGQADEPTDRGKVSFTVRSSKVVNFKVRGQLFQCGPPNEIDVTVKKIKLNSKGKGSANYKDLSVGTLKVTITVTSSGKASGTVRNPSSATGLCDPDFPVRFTAKRR
Ga0247801_10476851	3300023064	Soil	MRRLFLVFLLALAAIPAVALAAAKPGTYSGKSSGKYIQVGQADEPTDRGKVSFTVRSSKVVNFKVRGQLFQCGPPNEIDVTVKKIKLNSKGKGSANYKDLSVGTLKVTITVTSSGKASGTVRNPSSATGLCDPDFPV
Ga0210061_10529961	3300025537	Natural And Restored Wetlands	GAAALAPVRLQGAGEPLLGEKSRAGAENTMFVPMPRYLLCSLLALAAIPGVAFAAAKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRSSKVLHLKVRGQLFQCGPPAEIGVTVKTIRLNSKGKGSATYKDPNVGTLKITITVTSAGKASGTVRKPPSATGLCSSDYPVRFTAKRR
Ga0210143_10226492	3300025792	Natural And Restored Wetlands	MFVPMPRYLLCSLLALAAIPGVAFAAAKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRSSKVLNLKVRGQLFQCGPPAEIGVTVKTIRLNSKGKGSATYKDPNVGTLKITISVTSAGKTSGTVRKPPSATGLCSSDYPVRFTAKRR
Ga0207643_100972493	3300025908	Miscanthus Rhizosphere	MHRFLLATLLALAAIPAVAFAAAKPGTYSGTSSGKYIQVGQAEEPTDHGKVSFTVRSSKVLNFKVRKQLFQCGPPNEIPVTVKTIKLNSKGKGSANYKDPSVGTLKVTITVTSAGKAKGTIRKPPSATGLCNSDYPVRFTAKR
Ga0207661_101626264	3300025944	Corn Rhizosphere	VVTRTKQGYGVCMKRLVTSAALLLAAIPAVAFAAAKPGSYSGVSSAKYVQVGSVTEPTDKGKVTFSVKSSKALNFKMTGQQMNCGPGPVVNVSVKTIKLNSKGKGSATYKDPNVGTLKVTLTVTSTGKASGTVRRPPSAVGLCNPDYPAKFTAKRR
Ga0207679_109351632	3300025945	Corn Rhizosphere	VVTRTKQGYGVCMKRLVTSAALLLAAIPAVAFAAAKPGSYSGVSSAKYVQVGSVTEPTDKGKVTFSVKSSKALNFKMTGQQMNCGPGPVVNVSVKTIKLNSKGKGSATYKDPNFGTLKVTLTVTSTGKASGTVRRPPSAVGLCNPDYPAKFTAKRR
Ga0207712_113501121	3300025961	Switchgrass Rhizosphere	HRFLLASLLALAAIPAVAFAAAKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVQNSKVLNFKVRKQLFQCGPPNNIPVFVKTIKLNSKGKGSANYKDPSIGTLKVTITVTSAGKAKGTIRKPPSATGLCNSDYPVSFTAKRN
Ga0208531_10139021	3300026020	Rice Paddy Soil	MHRFLLASVLALAAIPAVAFAAPKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRSGKVLNFKVRKQLFQCGPPNEVPVTVKTIRLNSSGKGSAKYKDPNVGTLKVTITVTSSGKASGTVRKPPSATGLCDADYPVRFKAKRR
Ga0256867_103254041	3300026535	Soil	TRAGKKRSRPATQTSTFIPMHRFLLASILAFAAIPAVAFAAAKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRSSKVRNFKVRGQLFQCGPPAEILMTVKTIRLNSKGKGSASYKDPNIGTLKVTITVTSAGKAKGTIRKPPSATGLCNSDYPVRFTAKRR
Ga0209382_100129985	3300027909	Populus Rhizosphere	MFVPIHRFLLACLLALVAVPAVAFAAAKPGTYSGTTSGKYIQVGQAEEPTDRGKVSFTVRSSKVRNFKVRGQLFNCGLPPAEVKLTVKTIKLNSRGKGSASYKDPNVGTLKVTITVTSAGKAKGTVRKPPSATGLCNSDFPVRFTAKRG
Ga0307320_104501551	3300028771	Soil	APSTSMFVSMRRFLLASLLALVAVPAVAFAAAKPGTYSGTSSGTYIQVGQAEEPTDRGTVSFTVKSSKVLNFKVRKQLFQCGPPNEIPVTVKTIRLNSKGKGSATYKNPNVGTLKVTITVTSTGKASGTVRKPPSATGLCNSDYPVRFTAKRR
Ga0307278_103282051	3300028878	Soil	LHRFLLASLLALVAIPAVASAAAKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRSSKVLNFKVRRQRFQCGPPSEVPVTVKTIRLNSRGKGSANYKDPNVGTLKVTITVTSAGKASGTVRKPPSATGLCDPDYPVRFTAKRR
Ga0268386_106941722	3300030619	Soil	MHRFLLASILAFAAIPAVAFAAAKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRSSKVRNFKVRGQLFQCGPPAEILMTVKTIRLNSKGKGSASYKDPNIGTLKVTVTVTSAGKAKGTIRKPPSATGLCNSDYPVRFTAKRR
Ga0299914_100386133	3300031228	Soil	MHRFLLASILAFAAIPAVAFAAAKPGTYKGTSSGKYVQVGQAEEPTDRGKVSFTVRSSKVRNFKVKGQLFQCGPPAEILMTVKTIRLNSKGKGSASYKDPNIGTLKVTITVTSAGKAKGTIRKPPSATGLCNSDYPVRFTAKRR
Ga0299913_101577163	3300031229	Soil	MHRFLLASLLALAAIPAVAVAAAKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRSSKVLNFKVRGQLFQCGPPNEVPVTVKTIRLNSKGKGSANYKNPNVGTLKVTITVTSAGKAKGIVRKPPSATGLCNPDYPVRFTAKRR
Ga0299913_103045143	3300031229	Soil	MFVPMPRYLLCSLLALAAIPGVAFAAAKPGTYSGTSSGKYIQVGQAEEPTDRGKVSFTVRSSKVLNLKVRGQLFQCGPPAEIRVTVETIRLNSKGKGSATYKDPNVGTLKITISVTSAGKASGTVRKPPSATGLCSSDYPVRFTAKRR
Ga0334913_030653_442_876	3300034172	Sub-Biocrust Soil	MPRFLLASLLALAAIPAVAFAAAKPGTYSGTSSGKYIQIGQAEEPTDRGKVSFTVRRSKVLNFKVRRQRFQCGTPSEIPVTVRTIRLNSRGKGAANYKDPSVGTLRVTIRVTSTGKASGTVRRPPSATGLCSSDYPVRFTAKRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F093456

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences